mRNA_5516 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|130071
Unique NamemRNA_5516
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836CHL6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL6_9STRA)

HSP 1 Score: 549 bits (1415), Expect = 7.330e-198
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
Query:    1 KEWAADQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDLLADK 801
            KEWAADQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDLLADK
Sbjct:    1 KEWAADQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDLLADK 267          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836CKC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC8_9STRA)

HSP 1 Score: 298 bits (762), Expect = 9.050e-96
Identity = 146/262 (55.73%), Postives = 179/262 (68.32%), Query Frame = 1
Query:   16 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDLLADK 801
            DQL   AL N G  T+ QL+ L+ KCITPG+RIVLG LGGSISA      +Y   L KFL+ +CP ATV++HN A    GSL +GMCAR GLGQHVD+L+LEFSLND++HYH   +T   +YELA+R  LTSFQHAPA+  LFFWG  F   SAQ++H P+ +HYG+TGIS+RD VWPY+ AQ+APW  R DV  DSHHPT A H YT  L+ALYV+  FLDW++     A        LPP  LP P++    RLDL+  K
Sbjct:   55 DQLLLNALKNHGASTERQLQVLFWKCITPGARIVLGVLGGSISAFED--VSYQYPLGKFLRGLCPFATVEVHNGARAAHGSLTVGMCARCGLGQHVDMLILEFSLNDWSHYHRHNETACASYELALRTALTSFQHAPAVLGLFFWGPYFTKQSAQDYHEPLCKHYGVTGISMRDLVWPYIEAQKAPWTKRTDVCSDSHHPTPAVHLYTANLIALYVSGVFLDWSKNVTVTAPTRRLSSLLPPLALPEPISPELGRLDLIRGK 314          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836CKM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 6.250e-68
Identity = 120/260 (46.15%), Postives = 161/260 (61.92%), Query Frame = 1
Query:   37 LTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGG----SNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDS-HHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALD-SARFALPPPTLPPPLNGVAARLDLLAD 798
            L    + T+EQLE L+ KC+TPG+ I +G +GGSI+A    G    + Y   +   +Q  CP ATV   NAA G TGSL  GMC ++ LG HVD+L +EFSLND   Y   G+  +  YEL  RA L++F HAPA++ +FFWG+ FQ+ SAQ  H  +AR YG+TG+S+RD VWP L A   P+A R  V+ D+ HHP+ A HA+ G +++L++AE    WA    AA AL   AR  LP   LP PL    A+ D+LA+
Sbjct:   22 LAANADTTNEQLEVLFQKCVTPGASITVGAVGGSITAGAGAGVGDENAYIHRIAASVQRFCPAATVSAVNAARGGTGSLTTGMCLQNMLGPHVDLLAMEFSLNDREQYTVGGEFSAAPYELLTRAALSAFAHAPALYGIFFWGVNFQHASAQGAHLAVARRYGVTGVSMRDVVWPCLDAASPPYATRDAVLADARHHPSAAVHAHLGDIVSLHIAEALQRWAAAAAAAPALRRDARALLPLAALPEPLAPELAQYDVLAN 281          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A835ZKB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKB1_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.870e-62
Identity = 120/263 (45.63%), Postives = 160/263 (60.84%), Query Frame = 1
Query:   16 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYH-NRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDLLADK 801
            D+L++ +L +RG  TD+QL  L+ KCITPGS I +G LGGSI+  P   S+Y   + + +  MCP+ATV+  N A  + G+L LGMCAR+     +D+ + EFSLND  HY  + G   +  +EL  R  L+++  APA+FNLFFWG+ F + SAQ +H  +  HY +TGISLRD VWPY    +AP+A R DV  D HHP + F  +T  LL LYVA+RF +WA    AA     A     P  LPPPL     R DL + K
Sbjct:   74 DRLFENSLKHRGAITDQQLHPLFLKCITPGSTIRIGALGGSITHLP---SSYIWPVGRLIAQMCPEATVETFNGARSSHGALTLGMCARTVTAPALDLAVSEFSLNDRAHYTADDGTFSALPFELLTRTLLSAYDPAPAVFNLFFWGMSFSHDSAQPWHEAVGEHYDVTGISLRDLVWPYYETSKAPYARRQDVCVDGHHPNDRFQKFTAELLLLYVAQRFQEWAA--GAAKGGVDASIGRTPLRLPPPLAPDLERFDLESAK 331          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A835ZGF8_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF8_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.380e-57
Identity = 110/255 (43.14%), Postives = 155/255 (60.78%), Query Frame = 1
Query:   58 TDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMT------LQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKD-SHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALD--SARFALPPPTLPPPLNGVAARLDLLA 795
            T++QLE L+ KC+TPG+ IV+   GGSI+A   GG++ G        L + +  +CP A V   NAA G TGSL  GMC  + LG  VD+L +EFSLND+  Y   G   +  YEL +RA LT++QHAPA+++++FWG  F++ SAQE H  +AR YG+TG+S+RD VW  L A+ AP+A +  ++ D  HHP    H + G +LAL++A++ + WA  D  A A +   A   LP   L  PL    A  D+ A
Sbjct:   13 TEQQLEVLFEKCVTPGASIVVASTGGSITA--GGGAHVGDANVYIHRLARHVAQLCPQAAVTTINAARGGTGSLTTGMCLTNLLGPRVDLLAVEFSLNDFEQYTVGGAFSAAPYELLLRAALTAYQHAPAVYSVYFWGQMFRHESAQEPHLAVARAYGVTGVSMRDVVWSALDARAAPYATKEAILADPKHHPNARVHNHLGDILALHLAQKLVRWADADGGALAGERRGAHRLLPFAPLRTPLAPELAAYDVAA 265          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836C984_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C984_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.130e-56
Identity = 109/245 (44.49%), Postives = 142/245 (57.96%), Query Frame = 1
Query:   37 LTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLG--QHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLN 765
            L N G  TD QL+  + KC+TPGS I LG LGGSIS   AG   Y +T   +LQ MCP +TV+L+N A  +TGS+ LG CA++ +G  + VD+ + EF+LND + Y   GQ  S +YE  +R  LT+FQ+APAI  L  WG  F   S Q     +A+ Y L+ IS+RDAVWPY TAQR P A++ +V  D  HP+   H +   LL  YV  +FL+W   D A     S      P  LP   N
Sbjct:   17 LNNTGATTDTQLQNFFRKCVTPGSTINLGILGGSISQMLAG---YQVTWLAYLQQMCPTSTVKLYNGARPSTGSMTLGYCAKTSVGGPEQVDLFVTEFTLNDGSKYTTDGQFSSQSYEFLLRNTLTAFQYAPAIITLHLWGFPFVYDSPQPALVALAQRYALSAISIRDAVWPYYTAQREPLASKSEVTVDGIHPSAYVHKFAADLLHTYVVGKFLEWV--DSAIDGTASQTAGTEPVALPEASN 256          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A835YLT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLT4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.270e-55
Identity = 113/263 (42.97%), Postives = 150/263 (57.03%), Query Frame = 1
Query:   16 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHYHN-----RGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLNGVAARLDL 789
            D+L++ +L  RGE TD QLE  + KC+TPGS + +G +GGSI+  P   ++Y  +L   L  MCP A V   N A  + G+L LG+CAR+     +DV + EF+LND   Y       RGQ  +  YEL +R   T                   + SAQE H  + R YG+TG+SLRD VWPY TA+RAP+AARGDV  D HHP   F  +T  L+ LY+AERF++WA R  +  A ++ R  L P  LPPPL+    R DL
Sbjct:   67 DRLFENSLKLRGEVTDLQLEPFFRKCVTPGSAVRVGAIGGSITHAP---TSYVWSLGALLGEMCPHANVTALNGARSSHGALTLGLCARAVTHAALDVAVAEFALNDLGQYTRAEGAFRGQFSALPYELMMRNAFT-------------------HESAQEAHEEVGRRYGVTGLSLRDLVWPYFTAKRAPYAARGDVCSDLHHPNAQFQHFTAELVLLYIAERFVEWATRVRSGEASNATR-GLAPLALPPPLHPELERFDL 306          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836C8S8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.640e-50
Identity = 93/218 (42.66%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   37 LTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLG--QHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDW 684
            L N G  TD QL   + KC+TPGS I LG LGGSIS    G   Y +     L+ MCP +++ L++ A  +TGS+ LG CA++ +G  + VD+ + EF+LND + Y   G   S +YE  +R  +T+F++APAI  L FWG  F   SAQ     +A+ Y L+ IS+RDAVWPY TAQR P A   +  KD  HP++        LL  Y+ ++FL W
Sbjct:    1 LANTGTTTDTQLNNFFRKCVTPGSTINLGILGGSISQFSTG---YQVKWISRLKQMCPVSSINLYDGARSSTGSMTLGFCAKASIGSPEEVDLFVSEFTLNDGSRYTIDGAFNSQSYEFLLRNVITTFKYAPAIITLHFWGSPFVYESAQPDLVALAQRYKLSAISMRDAVWPYYTAQREPLATVEECTKDGIHPSDYVQKLAADLLHKYIVDKFLAW 215          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A836CCV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.020e-50
Identity = 102/251 (40.64%), Postives = 138/251 (54.98%), Query Frame = 1
Query:   16 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQHVDVLLLEFSLNDYTHY-HNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTLPPPLN 765
            DQL++ +L +RG  TD QLE  + KC+T GS I +G +GGS +  P    ++   +   LQ MCP  TV   N A G+ GSL LGMC ++     +D+   EF+LND   Y H  G T S  YEL  R  L ++  APA+F+LF WG  F+  SAQ    PI  +Y +T +SLRD VWPY+  +  PW +   + +D +H   +   Y  RL  LY+ ERF +WA R        +A   L P  LP PLN
Sbjct:   79 DQLFRNSLVHRGGITDLQLEIFFRKCVTAGSVINVGAIGGSNTQLPW---SFLWPVVDMLQEMCPKTTVTGFNGARGSHGSLTLGMCVKTVTAPELDIAFAEFALNDEGQYRHQNGNTSSFPYELMTRTMLANYDPAPAVFSLFMWGRNFKFDSAQADLEPIVEYYNVTALSLRDLVWPYVMDEAEPWPSVARLTRDKNHAIASIQHYVARLFVLYICERFQEWAARISDGTFDPNA--GLSPVVLPAPLN 324          
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Match: A0A835YI83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI83_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.230e-49
Identity = 103/251 (41.04%), Postives = 139/251 (55.38%), Query Frame = 1
Query:   16 DQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISADPAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLG-QHVDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFWGIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVKDSHHPTNAFHAYTGRLLALYVAERFLDWARR---DDAAAALDSARFALPPPTLPP 756
            D L++ +L + G  TD QLE ++ KC+  G  I LG+                         MCP + V LHN + G+TGSL LGMCA + +  + VD+ + EF+LND T Y  +    S  YEL +R  LT+F+  PAIFNL+FWG G    + Q  +  + + Y LTGIS+RD VWP+ +  RAP+A R DV  D HHPT   H +T  LL LY++  F  WA +     AA ALD ++  LPPP  PP
Sbjct:   82 DLLFKNSLKDDGAVTDRQLENVFRKCVK-GDTIRLGE-------------------------MCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQYTLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPP 306          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130071 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A836CHL6_9STRA7.330e-198100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CKC8_9STRA9.050e-9655.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKM3_9STRA6.250e-6846.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKB1_9STRA1.870e-6245.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGF8_9STRA1.380e-5743.14SGNH_hydro domain-containing protein n=1 Tax=Tribo... [more]
A0A836C984_9STRA1.130e-5644.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLT4_9STRA2.270e-5542.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8S8_9STRA2.640e-5042.66Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CCV4_9STRA4.020e-5040.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YI83_9STRA1.230e-4941.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:689953..690944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|130071|gw1.19.12.1
Descriptionlipolytic protein G-D-S-L family
COG categoryE
Max annot lvl2|Bacteria
EggNOG OGsCOG2755@1|root,COG2755@2|Bacteria
Evalue2.47e-15
Seed ortholog794903.OPIT5_05820
Hectar predicted targeting categoryother localisation
TranscriptId130393
TrackFilteredModels1
ProteinId130071
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|130071gene_5516Tribonema minus UTEX_B_3156 geneContig_19 689953..690944 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|130071Trimin1|130071|gw1.19.12.1Tribonema minus UTEX_B_3156 polypeptideContig_19 689953..690944 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5516_2exon_5516_2Tribonema minus UTEX_B_3156 exonContig_19 689953..690273 -
exon_5516_1exon_5516_1Tribonema minus UTEX_B_3156 exonContig_19 690465..690944 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5516CDS_5516Tribonema minus UTEX_B_3156 CDSContig_19 690465..690944 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5516 ID=mRNA_5516|Name=jgi.p|Trimin1|130071|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=801bp|location=Sequence derived from alignment at Contig_19:689953..690944- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAGGAATGGGCTGCGGACCAGCTGTGGCAGACGGCCCTCACAAATCGGGG
GGAGCGCACGGACGAGCAGTTGGAAGCTCTGTATCACAAATGCATCACGC
CGGGCTCGCGCATAGTGCTTGGTCAGCTGGGCGGCAGCATTTCCGCAGAC
CCAGCGGGGGGCTCGAACTACGGCATGACACTGCAGAAGTTCCTACAGAA
TATGTGCCCGGATGCCACAGTACAGTTACACAACGCTGCAGCAGGGACAA
CTGGCTCGCTTCAGCTAGGCATGTGCGCACGCAGTGGACTGGGCCAGCAC
GTGGATGTACTGCTGCTGGAATTCAGCTTGAACGATTACACCCATTACCA
CAATCGTGGCCAGACTGAAAGCCCGGCGTATGAGTTGGCAGTGCGTGCGG
GACTGACTTCTTTTCAGCATGCTCCCGCCATCTTCAACCTGTTTTTCTGG
GGCATTGGCTTTCAAAACACCAGCGCACAGGAGTTCCACGCGCCCATCGC
GCGCCACTACGGCCTCACGGGCATCTCGCTGCGCGACGCCGTGTGGCCCT
ACCTCACGGCTCAGCGCGCCCCGTGGGCGGCGCGCGGCGACGTCGTCAAG
GACAGCCACCACCCCACCAACGCCTTCCATGCGTACACGGGCCGCCTCCT
CGCGCTGTATGTCGCTGAGCGCTTCCTCGACTGGGCGCGGCGGGACGACG
CCGCGGCAGCGCTCGACAGCGCGCGCTTCGCGCTGCCGCCGCCGACGCTG
CCGCCGCCGCTGAACGGCGTCGCGGCGCGGCTGGACCTCCTCGCCGACAA
G
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protein sequence of jgi.p|Trimin1|130071

>Trimin1|130071|gw1.19.12.1 ID=Trimin1|130071|gw1.19.12.1|Name=jgi.p|Trimin1|130071|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=267bp
KEWAADQLWQTALTNRGERTDEQLEALYHKCITPGSRIVLGQLGGSISAD
PAGGSNYGMTLQKFLQNMCPDATVQLHNAAAGTTGSLQLGMCARSGLGQH
VDVLLLEFSLNDYTHYHNRGQTESPAYELAVRAGLTSFQHAPAIFNLFFW
GIGFQNTSAQEFHAPIARHYGLTGISLRDAVWPYLTAQRAPWAARGDVVK
DSHHPTNAFHAYTGRLLALYVAERFLDWARRDDAAAALDSARFALPPPTL
PPPLNGVAARLDLLADK
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mRNA from alignment at Contig_19:689953..690944-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5516 ID=mRNA_5516|Name=jgi.p|Trimin1|130071|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=992bp|location=Sequence derived from alignment at Contig_19:689953..690944- (Tribonema minus UTEX_B_3156 )
AAGGAATGGGCTGCGGACCAGCTGTGGCAGACGGCCCTCACAAATCGGGG GGAGCGCACGGACGAGCAGTTGGAAGCTCTGTATCACAAATGCATCACGC CGGGCTCGCGCATAGTGCTTGGTCAGCTGGGCGGCAGCATTTCCGCAGAC CCAGCGGGGGGCTCGAACTACGGCATGACACTGCAGAAGTTCCTACAGAA TATGTGCCCGGATGCCACAGTACAGTTACACAACGCTGCAGCAGGGACAA CTGGCTCGCTTCAGCTAGGCATGTGCGCACGCAGTGGACTGGGCCAGCAC GTGGATGTACTGCTGCTGGAATTCAGCTTGAACGATTACACCCATTACCA CAATCGTGGCCAGACTGAAAGCCCGGCGTATGAGTTGGCAGTGCGTGCGG GACTGACTTCTTTTCAGCATGCTCCCGCCATCTTCAACCTGTTTTTCTGG GGCATTGGCTTTCAAAACACCAGCGCACAGGTACAGTGATGCCAGAGCGA GCACTGTGTGAGCGCCCGGTAGCATGCAAGCTCTCAACGTGTAATCCCGC CCGCGTACACTGCGCTTCCCCTGCATGTGCTGTGCACGTGCATGCGCATA CGCGCGCTGAGACAAGCCTGTGCATGTATGATCCACTCCTTAACCCTGTC CCCATCACCCACTGCACGCAGGAGTTCCACGCGCCCATCGCGCGCCACTA CGGCCTCACGGGCATCTCGCTGCGCGACGCCGTGTGGCCCTACCTCACGG CTCAGCGCGCCCCGTGGGCGGCGCGCGGCGACGTCGTCAAGGACAGCCAC CACCCCACCAACGCCTTCCATGCGTACACGGGCCGCCTCCTCGCGCTGTA TGTCGCTGAGCGCTTCCTCGACTGGGCGCGGCGGGACGACGCCGCGGCAG CGCTCGACAGCGCGCGCTTCGCGCTGCCGCCGCCGACGCTGCCGCCGCCG CTGAACGGCGTCGCGGCGCGGCTGGACCTCCTCGCCGACAAG
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Coding sequence (CDS) from alignment at Contig_19:689953..690944-

>mRNA_5516 ID=mRNA_5516|Name=jgi.p|Trimin1|130071|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=801bp|location=Sequence derived from alignment at Contig_19:689953..690944- (Tribonema minus UTEX_B_3156 )
AAGGAATGGGCTGCGGACCAGCTGTGGCAGACGGCCCTCACAAATCGGGG
GGAGCGCACGGACGAGCAGTTGGAAGCTCTGTATCACAAATGCATCACGC
CGGGCTCGCGCATAGTGCTTGGTCAGCTGGGCGGCAGCATTTCCGCAGAC
CCAGCGGGGGGCTCGAACTACGGCATGACACTGCAGAAGTTCCTACAGAA
TATGTGCCCGGATGCCACAGTACAGTTACACAACGCTGCAGCAGGGACAA
CTGGCTCGCTTCAGCTAGGCATGTGCGCACGCAGTGGACTGGGCCAGCAC
GTGGATGTACTGCTGCTGGAATTCAGCTTGAACGATTACACCCATTACCA
CAATCGTGGCCAGACTGAAAGCCCGGCGTATGAGTTGGCAGTGCGTGCGG
GACTGACTTCTTTTCAGCATGCTCCCGCCATCTTCAACCTGTTTTTCTGG
GGCATTGGCTTTCAAAACACCAGCGCACAGGAGTTCCACGCGCCCATCGC
GCGCCACTACGGCCTCACGGGCATCTCGCTGCGCGACGCCGTGTGGCCCT
ACCTCACGGCTCAGCGCGCCCCGTGGGCGGCGCGCGGCGACGTCGTCAAG
GACAGCCACCACCCCACCAACGCCTTCCATGCGTACACGGGCCGCCTCCT
CGCGCTGTATGTCGCTGAGCGCTTCCTCGACTGGGCGCGGCGGGACGACG
CCGCGGCAGCGCTCGACAGCGCGCGCTTCGCGCTGCCGCCGCCGACGCTG
CCGCCGCCGCTGAACGGCGTCGCGGCGCGGCTGGACCTCCTCGCCGACAA
G
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