mRNA_5344 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348706
Unique NamemRNA_5344
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 822 bits (2123), Expect = 1.870e-297
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 3
Query:   45 MSISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDDSTGVESSLMLVAF 1562
            MSISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDDSTGVESSLMLVAF
Sbjct:    1 MSISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDDSTGVESSLMLVAF 506          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 8.580e-154
Identity = 244/435 (56.09%), Postives = 318/435 (73.10%), Query Frame = 3
Query:   51 ISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDA---TVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGE-DAVQFVLVSATVTAALRRLL-EAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 1340
            +SD+PF  P +      +++ LGLL ++  A++  GF +PS IQR AIPQI +GGN+V AA+TGSGKTLAYL+P+I  LK +E  ++    ++R+  RPRA+VLVPTRELA QVL V K+++ + K SSCG+ GGEDYGKQ++ LA   D+VVG+PGRLLKH + G  F+S+  +VV+DEVDTMLTQGF  DI  L +PL+      D  QF+ V+AT+T A+R+LL E G++ KVR VETRDVH  LP+++H M+D KGRDK+S L+++  QH         +   RTL+FCNTV S RA +  LR+  V A +YHGEVPS +R++ L  F+AG    LV TD+A+RGLD+P+V HV+MFDFPLNP+DYLHRSGRTARMGA+GRVTSLLAKRD VLAAAIE AV +G PLD L++RRTDY  GGKL    G +G
Sbjct:    2 VSDRPFRGPEADVIEEMDFTGLGLLDDLVDAMEEFGFDSPSKIQRKAIPQILNGGNIVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDMAQFIFVTATLTKAVRKLLGEDGDYSKVRQVETRDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQH--------LKDFKRTLVFCNTVKSCRAAEFGLREVDVKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKG 428          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 2.630e-152
Identity = 242/435 (55.63%), Postives = 317/435 (72.87%), Query Frame = 3
Query:   51 ISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDA---TVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGE-DAVQFVLVSATVTAALRRLL-EAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 1340
            +SD+PF  P +      +++ LGLL ++  A++  GF +PS IQR AIPQI +GGN+V AA+TGSGKTLAYL+P+I  LK +E  ++    ++R+  RPRA+VLVPTRELA QVL V K+++ + K SSCG+ GGEDYGKQ++ LA   D+VVG+PGRLLKH + G  F+S+  +V++DEVDTMLTQGF  DI  L +PL+      D  QF+ V+AT+T A+R+LL E G++PKVR VET DVH  LP+++H M+D KGRDK+S L+++  QH             RTL+FCNTV S RA +  LR+  + A +YHGEVPS +R++ L  F+AG    LV TD+A+RGLD+P+V HV+MFDFPLNP+DYLHRSGRTARMGA+GRVTSLLAKRD VLAAAIE AV +G PLD L++RRTDY  GGKL    G +G
Sbjct:  119 VSDRPFRGPEAEAIEEVDFTGLGLLDDLVDAMEEFGFNSPSKIQRKAIPQILNGGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVIVDEVDTMLTQGFAADIEKLSRPLLANPNRRDTAQFIFVTATLTKAVRKLLGEDGDYPKVRQVETSDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHYKDFK--------RTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGAKGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGKLGPLFGRKG 545          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 7.140e-140
Identity = 235/415 (56.63%), Postives = 295/415 (71.08%), Query Frame = 3
Query:  102 EWSSLGLL-PEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLM-RRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLA-AKSGSR 1337
            E+  LGL+ P V+G  D MGF  PS IQ+ A+PQ     N+  AA+TGSGKTLAYLLP + ALK QE+L +   R P RPRALVLVPTRELA QVL V K+++H AK SSC + GG D+G+Q+R LA   DVVV SPGRLLKHR    +FLSQVTHV+IDEVDTML QGFGPDI  L+ P++   Q +  VQF+L +AT+T A++RLL+ G  P +R++ET D+H+A+P   H MV+ +GRDK+ +LLEV+                +TL+FCNTV S RAV+HALRDAG ++  YHGE+ SA R  +L AF+A   P LV TD+A+RGLD+P V  V+MFDFP NP+DYLHRSGRTAR G RG + SL+AKRD  L+ AIE A+  G PLD LT  R DY PGG+LA A +G+R
Sbjct:   80 EFRRLGLVEPLVKGLAD-MGFTAPSPIQQAAVPQALQKQNLAFAASTGSGKTLAYLLPTVQALKVQEEL-EGFERAPKRPRALVLVPTRELAVQVLSVAKRLSHNAKFSSCAVVGGGDHGQQRRALAGVVDVVVASPGRLLKHRLNDHVFLSQVTHVIIDEVDTMLVQGFGPDIKELLGPILFSPQRKSEVQFILATATMTQAVKRLLDEGGLPPMRILETSDLHQAVPTAMHRMVNAQGRDKIQLLLEVIRDTNLRNE--------QTLVFCNTVLSCRAVEHALRDAGCSSLGYHGEMNSAARLESLEAFKAADVPTLVCTDLASRGLDMPSVARVVMFDFPPNPIDYLHRSGRTARFGQRGEIVSLVAKRDLPLSTAIERAIAKGEPLDQLTNNRRDYQPGGRLAPATTGNR 484          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 8.030e-139
Identity = 226/442 (51.13%), Postives = 309/442 (69.91%), Query Frame = 3
Query:   51 ISDQPFASPASAPEATG------------EWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLL-EAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSR 1337
            IS QPF++PA+ P+ T             E+  LGL  E    +  +G   PS IQR+AIP    G ++  +A+TGSGKTLAYLLP++  LK QE + +   R+  RPRAL+LVPTREL  QVL V K ++H  K+SSCG+ GGED+G Q+R L    D+VV SPGRLL+H ++G +F SQVTHVV+DE+DTML  GFGPD+  L+ PL  +   + VQ+++ +AT+T A++RL+ E G FPK R +++ D H++LP M+H M+D KG DK+ +LL+V++Q   +G         R +IFCNTV S RA +HALR+  + +A YHG++ S +RAAAL  F++G    LV TD+A+RGLD+P V HV+MFDFPLNP++YLHRSGRTARMGA+G+VTSLL KRD+VLA+A++ AV  G PLD+L+AR+ DY  GGKL+  S  +
Sbjct:  101 ISSQPFSTPATPPKTTSRSGDENAACDLAEFRRLGLGEETLEGLRKLGIKEPSVIQRLAIPAALKGDDVAFSASTGSGKTLAYLLPIMQELKWQEAV-EGKERQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPGRLLQHYEKGHVFFSQVTHVVVDEMDTMLKDGFGPDLKRLMVPLEAKSKREKVQYLMATATLTPAVKRLMAEEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQGRQNGE--------RAMIFCNTVQSCRAAEHALRELALPSACYHGDMRSEERAAALQKFKSGEVSFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGAKGKVTSLLTKRDKVLASAVQTAVAKGLPLDSLSARKRDYESGGKLSGLSSGK 533          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A7S2FKV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKV5_9STRA)

HSP 1 Score: 383 bits (983), Expect = 3.240e-124
Identity = 223/445 (50.11%), Postives = 285/445 (64.04%), Query Frame = 3
Query:   84 APEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKP-LMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVL-AQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRD-------------------------AGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSR 1337
            +P    E+  LGL   +  AV ++    PSSIQR A+PQ+  G N+ +AA+TGSGKTLAYLLP++ ALK QE +    + K  RPR LVLVPTRELA QVL V K + H +K SSC I GG D G+Q+R L   QDV V S GRLLKH++ G + LSQVTHVVIDEVDTML QGFGPD+  L+KP L+  +  + VQF++V+AT+T A+RRLLE G+ P++R +E  D+H+ALPN  H M++  G+DK+ VL +++  +H              TLIFCNTVAS RAV HALR+                         A     +YHGE+PS +R  AL  F+AG    LV TD+A RGLD+ +V  VI FDFP NP+DYLHR+GRTAR G +G + SL+ KRD  LA AIE AV  G PLD LT  + DY PGG+L+ K   +
Sbjct:   34 SPTDLPEFRKLGLTEGLLEAVADLELKEPSSIQRAAVPQVLQGQNIALAASTGSGKTLAYLLPIVQALKIQEDMGYDRLAK--RPRVLVLVPTRELATQVLSVAKHLGHYSKFSSCCIVGGGDNGQQRRALTGVQDVCVASAGRLLKHQELGHMHLSQVTHVVIDEVDTMLMQGFGPDLQKLLKPILLSPERRENVQFIVVTATMTKAVRRLLEDGDLPQMRTLEADDLHQALPNALHRMLNAAGQDKIEVLKDLVRGKHQKP-----------TLIFCNTVASCRAVTHALREETNNNFGDMDYDSDDAEGXXXXXXXASSPVRSYHGEMPSNERVEALGDFKAGDASILVCTDLAQRGLDIQDVAKVINFDFPRNPIDYLHRAGRTARAGRKGEILSLVLKRDLPLATAIERAVARGEPLDGLTNDKRDYAPGGRLSDKEAQK 465          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC)

HSP 1 Score: 399 bits (1025), Expect = 1.750e-122
Identity = 218/422 (51.66%), Postives = 291/422 (68.96%), Query Frame = 3
Query:  102 EWSSLGLLPEV-QGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLA-------QHGGSGSSAAAQAAAR-TLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 1340
            +W  LGL   + +G    +G   P++IQR+AIPQ+ SGGN+V AA TGSGKTLAYLLP++  LKS+E L   ++R+P RPRAL+L PTREL+ QVL V +  +  AK+SSC + GG+ + KQKR+L+   DVVVG+PGR+L H D+  L LS+V++VVIDEVDTML QGFGPDI  L++PL+ R   +  Q V  +AT+T A+RRLL+  + P VR VE   +H++LPN+++ M+D KG DKL  L E+L          GG G   A +   + TL+FCNTV S RA  HA+++AG  + AYHGEVP  QR A L AFR G  P LV TD+AARGLD+ +V  V+MFDFPLNP+D++HR+GRT R G++G V  LL +RDRVLA  ++ A+  GRPL  L++ R DY  GG+L   S + G
Sbjct:  845 KWRRLGLEESIARGTASMLGDVEPTAIQRLAIPQVLSGGNIVFAAETGSGKTLAYLLPMMQHLKSEE-LDGRSLRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPGRVLFHWDKSNLALSEVSYVVIDEVDTMLMQGFGPDINKLLQPLITRPDTEQPQLVFATATLTKAVRRLLDQEDLPAVRYVEAPGLHKSLPNVRYEMIDTKGEDKLDALRELLKVRGPQRPAEGGDGQRGAGEVYRKSTLVFCNTVNSCRACQHAIQEAGFTSLAYHGEVPQEQRKANLEAFRHGQVPYLVCTDLAARGLDIAQVDQVVMFDFPLNPIDFIHRAGRTGRAGSKGSVLCLLQRRDRVLATGVQRAIRLGRPLSDLSSSRKDYEKGGRLEQLSQAGG 1265          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A7S3XYE8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE8_HETAK)

HSP 1 Score: 355 bits (910), Expect = 3.580e-115
Identity = 201/339 (59.29%), Postives = 245/339 (72.27%), Query Frame = 3
Query:  333 RPRALVLVPTRELAAQVLGVTKQVAHT-AKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEF--PKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSRG 1340
            RPRALVLVPTRELA QVL V K + H  A+V+S  + GG DYG+Q+R L   QDV+V +PGRLL+HR++G  + S+VTHVVIDE+DTML QGFGP+I  L++ L R    D  QF+L +AT+T A+RR LE   +     R+VE  DVHR+LPN++HAMVD KGRDK++VLL+VL QH              T++FCNTV SA+ +DH+L +AG+ A  YHGEV   +R   LA F+ G    LVATD+AARGLD+P+V HV+MFDFPLNPVDYLHRSGRTARMGA G VTS+LAKRDRVLA AIEAAV  G PLD LTA + DY  G KLA   G RG
Sbjct:   10 RPRALVLVPTRELALQVLEVVKGLGHGGARVASAAVTGGGDYGQQRRVLERVQDVIVATPGRLLQHREKGHFYGSRVTHVVIDEMDTMLMQGFGPEIKKLIQTLDR----DRCQFLLCTATLTKAVRRFLEEENYIPGPPRVVEASDVHRSLPNLRHAMVDTKGRDKVTVLLDVLFQHREK----------TTIVFCNTVKSAQMLDHSLAEAGLRALCYHGEVRGDERRENLARFKRGEVRFLVATDIAARGLDVPDVEHVVMFDFPLNPVDYLHRSGRTARMGASGMVTSVLAKRDRVLAGAIEAAVRKGLPLDTLTASKRDYQEGKKLAEVVGRRG 334          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A7S4LLS1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS1_9EUGL)

HSP 1 Score: 350 bits (899), Expect = 1.040e-111
Identity = 194/408 (47.55%), Postives = 269/408 (65.93%), Query Frame = 3
Query:  114 LGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKSGSR 1337
            +G++ E+Q  +  MG  TPS IQ++ IP++  G ++  AA TGSGKTLAYLLPVI  LK+QE       R P RPRA+V VPTREL  QVL V K ++H AK+SS  + GGEDYGKQ+R L    DVVV +PGRL +H  +G  ++S+V  VVIDEVDTMLTQGF  D+   + P++     D +Q +  +AT+T  +R+ L+  +F  V ++E  D+HR +P+M+H +V  KGRDK+ VL EVL  +         Q   +T+IFCN++A+  AVD+ L++ GV   +YH ++P   RAA L  F++G+   LV TD+  RGLD+ +V HVI+FDFP +P+D+LHR+GRTARMG  G VTS++ K++  LA AI+ A+    PLD LT    DY  GG+LAA  G +
Sbjct:   68 MGVITELQEGLRGMGITTPSPIQQMVIPRLMRGESLAYAATTGSGKTLAYLLPVIQELKAQELAG--VERLPKRPRAIVFVPTRELGQQVLSVLKALSHHAKISSTLVVGGEDYGKQRRALDRPVDVVVATPGRLREHWKKGHFYMSEVKEVVIDEVDTMLTQGFTGDVMQFLNPIILNDDRD-LQVIFATATMTRPVRKFLQESKFADVEILEAADLHRVVPSMRHVIVQTKGRDKMDVLEEVLNAN---------QMMKKTMIFCNSLAAVHAVDNTLQEFGVDVVSYHKDLPVGDRAANLEKFKSGAVSTLVCTDIGQRGLDI-DVDHVILFDFPRSPIDFLHRAGRTARMGKTGTVTSIIHKKEYTLARAIDFAIKKDLPLDGLTTNPNDYKDGGRLAAIVGRK 462          
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Match: A0A7S4R250_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R250_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.000e-107
Identity = 227/537 (42.27%), Postives = 310/537 (57.73%), Query Frame = 3
Query:   42 RMSISDQPFASPASA---PEATGEWSSLGLLPEVQGAVDN-MGFAT-PSSIQRIAIPQITS-GGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATV--------------------RKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQ-DVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLMRRQG-----------EDAVQFVLVSATVTAALRRLLEAGEFP---------------------------------KVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAAR-----------TLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFR-AGS-------PPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGA------------------RGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYLPGGKLAAKS 1328
            R S  D   +SP +A     A   WS LGL  ++   + N +GF   P+ +Q++A+P + S   ++  AA+TGSGKTLAYLLP+I  LKS+E L  +T+                    R+P RPRA+VL PTRELA Q+L V K ++H AK+S+  + GGED GKQ++ L +   D++V +PGRL+KHRD   +FL  V HVVIDE+DTML QGF  DI +L+ P++ +Q            E A + +L SAT+T A++RLL   + P                                  +R++    +HRA+P ++   VD    DKLS+L++V+A+ GG GS+ + +   +           TL+FCNTV+S RA +HAL ++GV +  YHG + S  RAA L  FR  GS       P  LV TD+AARGLD+PEV HV+MFDFPLNP+DYLHR+GRTAR GA                   GRVT+L+AKRDRVLA AIE AV  G P+D L++R++DYLPGG+L A S
Sbjct:  117 RGSYDDSSSSSPTNAGTEESADIAWSKLGLTSDITTVLTNKLGFLDGPTPVQKMAVPALLSESASVAFAASTGSGKTLAYLLPIIQCLKSEELLLTSTITTPGEDAAAANEAAAALSKLRRPKRPRAIVLAPTRELAQQILSVLKVLSHQAKISAELLVGGEDNGKQRKRLESRPVDILVATPGRLVKHRDNSNVFLGSVKHVVIDEMDTMLEQGFQSDIGSLLHPMLYKQKVVREGDELELVEGAPRLILTSATMTNAVKRLLNHPDLPFKARRDPPRKKDDGDENSKDESILKIALPTKQTNMRILTAPGLHRAVPRLRQTFVDVGQADKLSLLVDVVARSGGEGSALSTKDKQQSIDNESHRRPLTLVFCNTVSSCRAAEHALAESGVNSLCYHGGLNSVDRAANLKTFREVGSSNDDEEAPTVLVCTDIAARGLDVPEVDHVVMFDFPLNPIDYLHRAGRTARGGADRDRSGKSEGQRRGVRPGNGRVTALVAKRDRVLAMAIENAVRNGEPIDGLSSRKSDYLPGGRLGAGS 653          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348706 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEI1_9STRA1.870e-297100.00DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
D7FZQ1_ECTSI8.580e-15456.09DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY63_9PHAE2.630e-15255.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WDP9_9STRA7.140e-14056.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D2M2_9STRA8.030e-13951.13Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2FKV5_9STRA3.240e-12450.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0G4F3L1_VITBC1.750e-12251.66Uncharacterized protein n=4 Tax=Vitrella brassicaf... [more]
A0A7S3XYE8_HETAK3.580e-11559.29Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4LLS1_9EUGL1.040e-11147.55Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4R250_9STRA1.000e-10742.27Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:274554..279220 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348706|estExt_Genemark1.C_Ctg_300044
BRITEko00000,ko01000,ko03009
KEGG koko:K20096
EC3.6.4.13
Descriptionhelicase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0513@1|root,KOG0331@2759|Eukaryota
Evalue1.22e-154
Seed ortholog2880.D7FZQ1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-08_001040.1
TranscriptId349028
TrackFilteredModels1
ProteinId348706
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348706gene_5344Tribonema minus UTEX_B_3156 geneContig_30 274554..279220 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348706Trimin1|348706|estExt_Genemark1.C_Ctg_300044Tribonema minus UTEX_B_3156 polypeptideContig_30 274598..279220 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5344_1exon_5344_1Tribonema minus UTEX_B_3156 exonContig_30 274554..275110 +
exon_5344_2exon_5344_2Tribonema minus UTEX_B_3156 exonContig_30 275782..276036 +
exon_5344_3exon_5344_3Tribonema minus UTEX_B_3156 exonContig_30 277568..278288 +
exon_5344_4exon_5344_4Tribonema minus UTEX_B_3156 exonContig_30 279189..279220 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5344UTR5_5344Tribonema minus UTEX_B_3156 five_prime_UTRContig_30 274554..274597 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5344CDS_5344Tribonema minus UTEX_B_3156 CDSContig_30 274598..275110 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5344 ID=mRNA_5344|Name=jgi.p|Trimin1|348706|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1565bp|location=Sequence derived from alignment at Contig_30:274554..279220+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCTGCTGCGCTCCCGCGTGCTGCAGACCATCCATGTCAGCAGAATGAGC
ATATCAGATCAGCCCTTCGCCTCTCCCGCCAGCGCACCGGAGGCCACGGG
TGAGTGGAGCAGCCTGGGGCTGCTACCTGAAGTCCAGGGAGCGGTGGACA
ACATGGGCTTCGCCACCCCCTCTTCCATCCAGCGCATAGCCATACCGCAG
ATCACCTCTGGAGGGAACATGGTAGTGGCGGCAGCCACTGGCTCCGGCAA
AACCCTCGCCTATCTGCTTCCTGTCATCAACGCCCTCAAGTCACAAGAAC
AGTTGTCCGATGCCACCGTCCGCAAGCCTGGCCGGCCCCGGGCTCTGGTG
CTGGTCCCCACTCGGGAGCTTGCAGCGCAGGTGCTTGGCGTCACGAAGCA
GGTGGCACACACTGCCAAGGTGTCGTCGTGTGGCATCTTTGGGGGAGAGG
ACTACGGAAAGCAGAAACGGGAGCTGGCTGCCTGCCAAGACGTAGTGGTA
GGCAGCCCGGGGAGGCTGCTCAAGCACAGAGACCAAGGCACCTTGTTCCT
GAGCCAGGTCACCCACGTGGTAATCGACGAGGTCGACACCATGCTCACGC
AGGGCTTCGGACCCGACATAACGGCGCTGGTGAAACCGCTAATGCGGCGC
CAGGGCGAGGACGCCGTGCAGTTTGTGCTGGTTTCGGCGACAGTTACAGC
AGCGCTCAGGCGGTTGCTGGAGGCGGGGGAGTTCCCCAAGGTGCGCATGG
TGGAGACGCGCGACGTTCACCGCGCGCTGCCGAACATGAAGCACGCCATG
GTCGACTGCAAGGGCCGCGACAAGCTCTCCGTCCTGCTGGAGGTGCTCGC
GCAGCACGGCGGCAGCGGCAGCAGCGCGGCGGCGCAGGCGGCGGCGCGCA
CGCTCATCTTCTGCAACACGGTCGCGTCCGCGCGCGCCGTCGACCACGCG
CTGCGCGACGCCGGCGTCGCCGCCGCCGCCTACCACGGCGAGGTCCCCAG
CGCTCAGCGCGCGGCGGCGCTTGCGGCGTTCCGCGCGGGGTCTCCTCCGC
GGCTCGTGGCGACTGATGTCGCCGCGCGCGGCCTCGATCTGCCGGAGGTT
GGCCATGTGATTATGTTTGACTTCCCGCTGAACCCGGTGGACTACCTGCA
CCGCAGCGGGCGCACGGCGCGCATGGGCGCGCGCGGCCGCGTGACTTCCC
TGCTCGCCAAGCGCGACCGTGTGCTCGCCGCCGCCATCGAGGCAGCAGTG
CTCGCCGGCCGCCCCCTCGACGCCCTCACCGCGCGCCGCACCGACTACCT
CCCTGGCGGCAAGCTCGCCGCCAAGAGCGGCAGCAGAGGCGGCGGCGGCG
GCGGCAGCGGCAGCAGCGCTCGTCGTACTGGCAGCAGCGATGCGTCGGCG
CGGCGGCCGCGGTCGGCGGCAGGGGGGGGGGGCAGGGGGGCGGCGGCGGG
GGGAGGAGGGGGGCCTAGGGGAAAGGGGGTGCCAAGGCGCAGGCGGCGGG
GCGGGGGCGGGCCGGGCGATGACTCGACTGGCGTCGAGTCCTCGCTGATG
CTGGTGGCCTTTTGA
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protein sequence of jgi.p|Trimin1|348706

>Trimin1|348706|estExt_Genemark1.C_Ctg_300044 ID=Trimin1|348706|estExt_Genemark1.C_Ctg_300044|Name=jgi.p|Trimin1|348706|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=507bp
MSISDQPFASPASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAI
PQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDATVRKPGRPRA
LVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDV
VVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQGFGPDITALVKPLM
RRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKH
AMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVD
HALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLP
EVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEA
AVLAGRPLDALTARRTDYLPGGKLAAKSGSRGGGGGGSGSSARRTGSSDA
SARRPRSAAGGGGRGAAAGGGGGPRGKGVPRRRRRGGGGPGDDSTGVESS
LMLVAF*
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mRNA from alignment at Contig_30:274554..279220+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5344 ID=mRNA_5344|Name=jgi.p|Trimin1|348706|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4667bp|location=Sequence derived from alignment at Contig_30:274554..279220+ (Tribonema minus UTEX_B_3156 )
CGCTGCTGCGCTCCCGCGTGCTGCAGACCATCCATGTCAGCAGAATGAGC ATATCAGATCAGCCCTTCGCCTCTCCCGCCAGCGCACCGGAGGCCACGGG TGAGTGGAGCAGCCTGGGGCTGCTACCTGAAGTCCAGGGAGCGGTGGACA ACATGGGCTTCGCCACCCCCTCTTCCATCCAGCGCATAGCCATACCGCAG ATCACCTCTGGAGGGAACATGGTAGTGGCGGCAGCCACTGGCTCCGGCAA AACCCTCGCCTATCTGCTTCCTGTCATCAACGCCCTCAAGTCACAAGAAC AGTTGTCCGATGCCACCGTCCGCAAGCCTGGCCGGCCCCGGGCTCTGGTG CTGGTCCCCACTCGGGAGCTTGCAGCGCAGGTGCTTGGCGTCACGAAGCA GGTGGCACACACTGCCAAGGTGTCGTCGTGTGGCATCTTTGGGGGAGAGG ACTACGGAAAGCAGAAACGGGAGCTGGCTGCCTGCCAAGACGTAGTGGTA GGCAGCCCGGGGAGGCTGCTCAAGCACAGAGACCAAGGCACCTTGTTCCT GAGCCAGGTCAGTGCTTTGCTGTGTTCAATAAACATGTTCCACTTCACAG CAGAAGTTACTGCTTCCAATGGCTCTGTGCTACTTCAACTCAGTGGCACT TCAAAGCAGGTCCATATGTGAACGTGCATGTATCCATCCAGCTCATATCT GGTCCTGTGATAGTTTCCAGTCCTCACCTGACATAATGCTGGAGTGCGAT GTCAATGCCTGGACGATTTTCACTCGTTGCACGTCATAAACATTGTACTG GTAGTTTTTAGTCTGCCATTGAACAGTAGACCGTTGCACTTCGTGTTTGA TCATTGGACTTCAGGTCAGTGCTGTCGATGCTGGCTTGCAGCGTACATGA TACTGTTGCTCTGCGGTGAATAGAACGCTCCCAGTTTCGTGCGGGTAGTA TAGTGCACCTTCACGAAATACCTACACTTATTATTATATTAATTCGTCAT TGCTCTGCAGGTGTGGCTATAGTTGAGTGCTTGAAGCATCACTTGCTTGC TCGATGACTTTTGATACGCTTCTTGAAGCCGGACAGAGGCTTTGCACCCC TTTTATCGCTGACATTTGGCATTATACTGTGATTGTAAATCAGTGTTGAA TCGGCTCGACAGAGACTACACACTTGCAACTGCTGACACAGCCAACTCTT TCATTGCGCTGCCACGGGTCACTCGCAGGTCACCCACGTGGTAATCGACG AGGTCGACACCATGCTCACGCAGGGCTTCGGACCCGACATAACGGCGCTG GTGAAACCGCTAATGCGGCGCCAGGGCGAGGACGCCGTGCAGTTTGTGCT GGTTTCGGCGACAGTTACAGCAGCGCTCAGGCGGTTGCTGGAGGCGGGGG AGTTCCCCAAGGTGCGCATGGTGGAGACGCGCGACGTTCACCGCGCGCTG CCGAACATGAAGCACGCCATGGTCGACTGCAAGGTGAGCGCGTGAATTCA TGAAGCTGCGTGTGAATTTACTCATGAAATCGTGATGATGTGAAGACGCG GGATGTTAACCGCGCGCTGCCAAGCATAAAGCACGCCATGGTTGTCTGCA ATGACAGTTTGAATTCATGTAATGTTTCATGAAACTGCACATGCAGCCAC AATTCATGACATTAAATCCCTCGTCACCCAGAGCTCTACGTTTTTGATTC GTTTCCATCAAAACAATGAAGCCGCAAGACGCGCAAGCTACGCAATGGTT GGGTGCATGTGGGTGCGGTGACTGCAGCTGAATGATGATTGAATTTCAAC CAAGATCTGTTCTGAACCTATGTGAAGAACTATCATTCAGCCTTCAATCT GACAGCTCTTTCCCACGCCAGCAGCTGTGATGCCTGCACCGGTGCCGGTT ATGCTGTGGTGCCGCCAACTACTACAGTTGACGCCTGTTGGTAAAGTTTA CATGATGTGCATACATCAAAATACATCGAGAGCGTTGCTATGGGGTTGTA CGCAATGCGGATGATCGCCATCAGCCATTTGTTTACTGGCTTCCAGAGAA CCATACTTCCAAGTATATTGCAATGCGAGTTCTTTCAAGTTAAAACTGCG TGGCATTGAATGTTTTTCACTGCGTTGTGCTTGGCAAGTGTCTTCAAAGC TCTTGATCGGTGCTGGGGAACCCTGTCGACAACATGTGTGTCATGACTGG TGTGTTGGCGCGTAGGCAATGGTTATATGTGCCTACACCAGTGCAACAGC GCTCCAACGCATGGAGCATGTGATAGCTGCTGCATGATGATTGAATTTCA ACCAAGATCTGTTCTGAGCCTACGTGAAGAACTATCATTCAGCCTTCAAT CTGACAGCTCTGCTCTGCTCCTGGGCTCTGGTGATTTGCCAAACGTCAAT TTCCTGCAATTGGTGGGACATTCGATGGTCACGCCAACATCTGGCTCTGT TTCTGTACTTCCAGTCAATTCACACCGCCTTTGACCAGCTCTTGATGTAC TTCGAAGTTGCACGTAAGCAAATCTTGCAAATATTGCGGACACGTTTTGT GCTGCGGGTGGTGCGCCTTGCTGTGACTCAGATACATACGTACACCATTG TCAAGATCACGTCACATGCATTCACTATGAACTCACGCGCACGCCCTTGG ACAGGCCTCAATGCACCTAGTCAGCACTTGGCAATCTCGTGGTCAAAATG TGTGTTGCGAATGGTGCGCTGTGACTCTGATAAATTCCTACACCGATGGT ACAGTGCAGTACTTTGACGGTCTGGGAAGGTGGCCACTGCTGCATGATGA TTGAATCACAAACCAAGATCTGTTCTGACTCTATGTGAAGAACAGCCATT CAGCCTTCAATCTGACAGCAGACCCCCCTTCCTCCCAGTCAAACCGTGAT CCCACCCCCAACACCTCCCCCCTCTGTGCGCATCATGCCGTTCTCTTCGA GGGGCACTGACCCCCCAGAGCCCCCCCCCTCTCCCTCTGTCGCGCGCCAC CGGCGCCACCGCAGGGCCGCGACAAGCTCTCCGTCCTGCTGGAGGTGCTC GCGCAGCACGGCGGCAGCGGCAGCAGCGCGGCGGCGCAGGCGGCGGCGCG CACGCTCATCTTCTGCAACACGGTCGCGTCCGCGCGCGCCGTCGACCACG CGCTGCGCGACGCCGGCGTCGCCGCCGCCGCCTACCACGGCGAGGTCCCC AGCGCTCAGCGCGCGGCGGCGCTTGCGGCGTTCCGCGCGGGGTCTCCTCC GCGGCTCGTGGCGACTGATGTCGCCGCGCGCGGCCTCGATCTGCCGGAGG TTGGCCATGTGATTATGTTTGACTTCCCGCTGAACCCGGTGGACTACCTG CACCGCAGCGGGCGCACGGCGCGCATGGGCGCGCGCGGCCGCGTGACTTC CCTGCTCGCCAAGCGCGACCGTGTGCTCGCCGCCGCCATCGAGGCAGCAG TGCTCGCCGGCCGCCCCCTCGACGCCCTCACCGCGCGCCGCACCGACTAC CTCCCTGGCGGCAAGCTCGCCGCCAAGAGCGGCAGCAGAGGCGGCGGCGG CGGCGGCAGCGGCAGCAGCGCTCGTCGTACTGGCAGCAGCGATGCGTCGG CGCGGCGGCCGCGGTCGGCGGCAGGGGGGGGGGGCAGGGGGGCGGCGGCG GGGGGAGGAGGGGGGCCTAGGGGAAAGGGGGTGCCAAGGCGCAGGCGGCG GGGCGGGGGCGGGCCGGGCGATGACTCGACTGGCGGTGTTTTGAGATGTG TATGTAGTAGAGGCGGTAGAGGCTGGGTACGTTTTTGCTTAATGTCAATA TCAGTGGGTTGTGTTTTTGTGTACATGCACGGCTGGTTGACTTGGCCTCA TGCTGCTGATGTTGTGCGGGTTGTAGGGCGCTGGTGCTTTGTATGCGGTC TCTGCTGGCCAGCTTCTCAATCATCGTGAATTGGATTGCACATGTGTACT GGATTATTTGTGGCATTGTTTGCTGGAAACATCCTAAATCATGCTGGCGA CACTTCTAGGCATTGTTCACGTCAAATATCGGTGCGTTTGACCATTACTC TCTGTCACGAGAAGGGATAATGTTGAAGTTGCTGCACTGAACTGTGCAAC GTTGCACTGAGTGACTCGCCTCTGGCACCATCTTGTCGTCTGGTTGTGAG TTTCAGGCCAAGGGCACAACAAGCAAACCCACATGACTGCATGCACAATC AACCCCAAGAGCCACCGCCCTCTCAACAAAAGTACCAATACCAACCAGCA TACATGTAAGCATCAGCAACAGGGCTTCACTGACGGCAAACACAAGACTG TAGCGTAAAAGCTGTGAAGCAGAGTAGATCAACACTGTCATGAAGGTAGA GAGAGACACAGCAAAGCCAGCATAATTTAATGTTTGGATTGAAATGTCAG AATGTGTCTCTGCAGGACATCTTTGCCCATGTCCTTTAACTCATCTTTGC CCATGTCCATTAACTACACTCTTCCACCGGCGGTGCAACATGCGTTCACA CCACAGCATGTGCTGTGCCAAATCGCTTACGCCGATGCCGATGGCAGACA GAGAGATGCATTGAAACTGCCTCTACGTGGCGCTGCGCGGTGCAGCACGA GCAGTGTCGGGTACTCCTGCCGCCACCCCCCTGAGTCGAGTCCTCGCTGA TGCTGGTGGCCTTTTGA
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Coding sequence (CDS) from alignment at Contig_30:274554..279220+

>mRNA_5344 ID=mRNA_5344|Name=jgi.p|Trimin1|348706|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1521bp|location=Sequence derived from alignment at Contig_30:274554..279220+ (Tribonema minus UTEX_B_3156 )
ATGAGCATATCAGATCAGCCCTTCGCCTCTCCCGCCAGCGCACCGGAGGC
CACGGGTGAGTGGAGCAGCCTGGGGCTGCTACCTGAAGTCCAGGGAGCGG
TGGACAACATGGGCTTCGCCACCCCCTCTTCCATCCAGCGCATAGCCATA
CCGCAGATCACCTCTGGAGGGAACATGGTAGTGGCGGCAGCCACTGGCTC
CGGCAAAACCCTCGCCTATCTGCTTCCTGTCATCAACGCCCTCAAGTCAC
AAGAACAGTTGTCCGATGCCACCGTCCGCAAGCCTGGCCGGCCCCGGGCT
CTGGTGCTGGTCCCCACTCGGGAGCTTGCAGCGCAGGTGCTTGGCGTCAC
GAAGCAGGTGGCACACACTGCCAAGGTGTCGTCGTGTGGCATCTTTGGGG
GAGAGGACTACGGAAAGCAGAAACGGGAGCTGGCTGCCTGCCAAGACGTA
GTGGTAGGCAGCCCGGGGAGGCTGCTCAAGCACAGAGACCAAGGCACCTT
GTTCCTGAGCCAGGTCACCCACGTGGTAATCGACGAGGTCGACACCATGC
TCACGCAGGGCTTCGGACCCGACATAACGGCGCTGGTGAAACCGCTAATG
CGGCGCCAGGGCGAGGACGCCGTGCAGTTTGTGCTGGTTTCGGCGACAGT
TACAGCAGCGCTCAGGCGGTTGCTGGAGGCGGGGGAGTTCCCCAAGGTGC
GCATGGTGGAGACGCGCGACGTTCACCGCGCGCTGCCGAACATGAAGCAC
GCCATGGTCGACTGCAAGGGCCGCGACAAGCTCTCCGTCCTGCTGGAGGT
GCTCGCGCAGCACGGCGGCAGCGGCAGCAGCGCGGCGGCGCAGGCGGCGG
CGCGCACGCTCATCTTCTGCAACACGGTCGCGTCCGCGCGCGCCGTCGAC
CACGCGCTGCGCGACGCCGGCGTCGCCGCCGCCGCCTACCACGGCGAGGT
CCCCAGCGCTCAGCGCGCGGCGGCGCTTGCGGCGTTCCGCGCGGGGTCTC
CTCCGCGGCTCGTGGCGACTGATGTCGCCGCGCGCGGCCTCGATCTGCCG
GAGGTTGGCCATGTGATTATGTTTGACTTCCCGCTGAACCCGGTGGACTA
CCTGCACCGCAGCGGGCGCACGGCGCGCATGGGCGCGCGCGGCCGCGTGA
CTTCCCTGCTCGCCAAGCGCGACCGTGTGCTCGCCGCCGCCATCGAGGCA
GCAGTGCTCGCCGGCCGCCCCCTCGACGCCCTCACCGCGCGCCGCACCGA
CTACCTCCCTGGCGGCAAGCTCGCCGCCAAGAGCGGCAGCAGAGGCGGCG
GCGGCGGCGGCAGCGGCAGCAGCGCTCGTCGTACTGGCAGCAGCGATGCG
TCGGCGCGGCGGCCGCGGTCGGCGGCAGGGGGGGGGGGCAGGGGGGCGGC
GGCGGGGGGAGGAGGGGGGCCTAGGGGAAAGGGGGTGCCAAGGCGCAGGC
GGCGGGGCGGGGGCGGGCCGGGCGATGACTCGACTGGCGTCGAGTCCTCG
CTGATGCTGGTGGCCTTTTGA
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