mRNA_5095 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A836CPX4_9STRA (Putative nuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPX4_9STRA) HSP 1 Score: 303 bits (776), Expect = 2.880e-104 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 Query: 1 MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTSFT 453 MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTSFT Sbjct: 1 MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTSFT 151
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A835YYA9_9STRA (Putative nuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA9_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.060e-70 Identity = 106/148 (71.62%), Postives = 124/148 (83.78%), Query Frame = 1 Query: 1 MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKT 444 M LRKLS L+ + W +VTYD+C+KYLPAHDGD+AKV+RVIDGDTVHLALK+NG F R+ CRL GID AE+ SKD EK L E+AKS+LA ACDNKLVTLSNV LEKYGRLLADLTV G++VTLSQVML +P++CHAYDGGKK+ Sbjct: 1 MRLRKLSNLISRA-GSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKS 147
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: B5LWN7_9PHYC (Putative nuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN7_9PHYC) HSP 1 Score: 108 bits (270), Expect = 2.320e-27 Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 58 QDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLA-LKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKT 444 + + + C +YLP H+GDI V RV DGDT LA + + G VR SCR++ IDT EMR K +E+ +A AK L A K VT+ S +KYGR+LADL+ S ++S ML +P++C +Y GGKKT Sbjct: 9 EPLCFRECVRYLPVHEGDIVFVCRVYDGDTCTLAWVDHAGRSVRSSCRIRDIDTPEMRGKSPEERKMASLAKERLQSAILEKFVTVWRPSSDKYGRILADLSTE-SIRSVSTYMLEMPDICKSYTGGKKT 137
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A6C0FAJ1_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAJ1_9ZZZZ) HSP 1 Score: 102 bits (253), Expect = 1.560e-24 Identity = 58/138 (42.03%), Postives = 90/138 (65.22%), Query Frame = 1 Query: 43 NGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLA--LKNNGNFV-RLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTS 447 +G DW DV+Y + E + P AKV++V DGDT+ +A L+ G+ V R S RL+GID E+R+KD+DEK ++A+ ++ NK+V +SN+ +KYGR+LAD+++ G +VT + + NL + Y+GGKK S Sbjct: 11 SGFDWSDVSYKTTEVFRPVFSK--AKVVKVYDGDTITVATPLQFTGSPVYRFSVRLRGIDCPEIRTKDADEKVCGQKARKIMLDQVMNKVVDVSNIDYDKYGRILADVSIDGVNVTEALITQNLAVV---YNGGKKNS 143
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A6C0CYL5_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CYL5_9ZZZZ) HSP 1 Score: 87.8 bits (216), Expect = 8.580e-19 Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 52 DWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKN---NGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKT 444 D+ +V +D+ ++P VI+V DGDT+ +A K N R S RL+GID E++SK EK+LA A+ LA K V L NVSLEKYGRLLAD+ G + ++Q MLN + YDGGKKT Sbjct: 49 DFSNVEWDNTTPFVPPIKS--GYVIKVYDGDTITIAAKMPYMNSPIYRFSVRLKGIDCPEIKSKSLIEKELALNARDALANKIMRKNVILHNVSLEKYGRLLADVYCEG--IHMNQWMLN-NKFALPYDGGKKT 177
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A6C0LVU8_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LVU8_9ZZZZ) HSP 1 Score: 84.0 bits (206), Expect = 1.560e-17 Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 19 SALVCGSHNGIDW--------QDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALK---NNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKK 441 SA + + ID+ ++ Y ++P G KVI+V DGDT+ +A K +N + R S R+ GID E++ K +EK A A+ + + K+V L NVSLEKYGR+LAD+ + G V + Q +L L +YDGGKK Sbjct: 7 SACISNKNKAIDYISEEDNLLTEIKYKETIPFIPPVTG--GKVIKVYDGDTITIASKMPWDNSPYYRFSVRINGIDCPEIKGKTENEKQCAILAREHVDHLVNGKIVHLENVSLEKYGRILADVFIEG--VNIGQSLLE-KRLAVSYDGGKK 153
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A6C0ET05_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ET05_9ZZZZ) HSP 1 Score: 82.8 bits (203), Expect = 2.210e-17 Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 1 Query: 61 DVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALK---NNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKK 441 +V Y++ ++P + KVI+V DGDT + K N R S R+ GID+ E++ K ++EK+LA++++ L+ K+VTL NVS EKYGR+LAD+ + DV +++ ML+ YDGG K Sbjct: 8 NVVYENTVPFVPPIT--VGKVIKVYDGDTFTIVSKLPYNGSPIYRFSVRINGIDSPEIKGKTANEKELAKKSRDALSNLILGKIVTLQNVSTEKYGRILADVYL--GDVCINEWMLS-NNYAVKYDGGTK 132
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A2E9UET5_9BACT (TNase-like domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E9UET5_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 9.630e-17 Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 25 LVCGSHNGIDWQDVTYDSCEKYLP-------AHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTSF 450 ++CG + + + + +DS +P HDG KV+ V DGDTV + +K G F R +CR++G+DT E+R+++ EK + + + L +K+V + +KYGRLL D+ + + +T L + +YDGG K S+ Sbjct: 7 VLCGCFSVCNVETMDWDSVNNDVPMFGFEGETHDG---KVVNVYDGDTVKIVMKMFGKFYRFNCRIEGVDTPELRTRNKKEKAMGIKVRDELRKKILDKMVQVKCGEFDKYGRLLVDIIIDNTSITK---WLIENKFAFSYDGGTKKSW 149
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: A0A6C0IRR9_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IRR9_9ZZZZ) HSP 1 Score: 81.3 bits (199), Expect = 2.010e-16 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 121 VIRVIDGDTVHLALK---NNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKTSF 450 VI+V DGDT+ +A K N R S RL GID E+R+K ++EK LA A+ L+ K ++L N+++EKYGR+LAD+ + G + +S+ ML +L YDGG K +F Sbjct: 58 VIKVYDGDTITIASKLPYNGSPLYRFSVRLNGIDAPEIRAKITEEKKLAIIARDTLSNQIMGKTISLENIAVEKYGRILADVIIDGQN--MSEYMLE-QKLAVKYDGGTKGTF 167
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Match: X0WYP8_9ZZZZ (TNase-like domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0WYP8_9ZZZZ) HSP 1 Score: 79.3 bits (194), Expect = 4.010e-16 Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 121 VIRVIDGDTVHLALK---NNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKK 441 VI+V DGDT+ +A K N R S RL GIDTAEM++KD DE ++A+ A+ L+ NK V L ++ EKYGRLLA+ V + L++ ML +L +YDGG K Sbjct: 10 VIKVYDGDTITIASKLPYRNSPMYRFSVRLFGIDTAEMKTKDKDELEMAKLARDKLSEKILNKTVILKDIRREKYGRLLAN--VYCDKICLNEWMLE-KKLAVSYDGGTK 116 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174778 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5095 ID=mRNA_5095|Name=jgi.p|Trimin1|174778|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=456bp|location=Sequence derived from alignment at Contig_117:291544..291999- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTTCTGCGTAAGCTGAGTGCGCTAGTATGCGGGTCGCATAACGGCATback to top protein sequence of jgi.p|Trimin1|174778 >Trimin1|174778|e_gw1.117.130.1 ID=Trimin1|174778|e_gw1.117.130.1|Name=jgi.p|Trimin1|174778|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=152bp MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVback to top mRNA from alignment at Contig_117:291544..291999- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5095 ID=mRNA_5095|Name=jgi.p|Trimin1|174778|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=456bp|location=Sequence derived from alignment at Contig_117:291544..291999- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_117:291544..291999- >mRNA_5095 ID=mRNA_5095|Name=jgi.p|Trimin1|174778|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=456bp|location=Sequence derived from alignment at Contig_117:291544..291999- (Tribonema minus UTEX_B_3156 )back to top |