mRNA_4958 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A835Z0F3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F3_9STRA) HSP 1 Score: 434 bits (1117), Expect = 1.710e-152 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 Query: 1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG 648 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG Sbjct: 1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG 216
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A835Z1I3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I3_9STRA) HSP 1 Score: 313 bits (802), Expect = 2.890e-105 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 Query: 1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM 468 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM Sbjct: 1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM 156
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7W0ZQA6_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0ZQA6_9DELT) HSP 1 Score: 65.1 bits (157), Expect = 1.710e-8 Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGL 258 ++ P PW +S Y P+ YA D L+ A +G+ VDV CGPG A +AAQ+G V A DFS GM++ A+ LGL Sbjct: 7 MSTPVPWDLLSSAYADEVVPLLERYATDALRLAAPVTGARIVDVACGPGTLAILAAQQGHLVDAIDFSAGMIERFEARRLTLGL 90
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7W0Y884_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Y884_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 5.090e-7 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGL 258 L P PW ++ Y+ P+ YA LQ A +G+ VDV CGPG A +AAQ G V A DF+ M++ A++ LGL Sbjct: 6 LASPLPWDLVSTAYEAEVTPVFEGYARHALQLAAPANGTRLVDVACGPGTLAVLAAQAGHPVDAIDFAPRMIERLDARIAELGL 89
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: UPI001F59C105 (methyltransferase domain-containing protein n=1 Tax=Sphingobium sp. Sx8-8 TaxID=2933617 RepID=UPI001F59C105) HSP 1 Score: 59.3 bits (142), Expect = 1.480e-6 Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVM 279 P+ W A A Y+K P T+ +A + L GS +D+ G G A AA+ G HV+ATDFS GMV A++ A LP EA+VM Sbjct: 4 FENPNHWDAAAQHYEKTAHPFTAHFAQAAMARVALGPGSHVLDIAAGTGALALAAARTGAHVLATDFSPGMV----ARIAAARLPNVEARVM 91
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A3E2ESC3_9ACTN (Methyltransferase domain-containing protein n=13 Tax=Eggerthellaceae TaxID=1643826 RepID=A0A3E2ESC3_9ACTN) HSP 1 Score: 58.5 bits (140), Expect = 3.560e-6 Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 1 Query: 37 ASMYDKGFAPITS-----MYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVR 396 A+ +DK A T+ +Y L++A++ SG T D+GCG G A + G V+A DFSQGM+D A+L A G+ ++ + P F V E T V A+ + A +D +R Sbjct: 31 AAFWDKRSATFTTKDAPNLYVEKFLEYAEIRSGETVFDMGCGTGALAVPLGEAGHKVVAADFSQGMLDQMQARLDAAGVRTVFPKLMSWEDDWPAFGVREGM-TDV-AIASRSIATADLRDALLR 153
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: UPI0019D6BD85 (methyltransferase domain-containing protein n=1 Tax=Myxococcus sp. SCHIC003 TaxID=2813577 RepID=UPI0019D6BD85) HSP 1 Score: 58.2 bits (139), Expect = 4.130e-6 Identity = 32/98 (32.65%), Postives = 47/98 (47.96%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAEL 300 L P+PW A Y + P+ +A D L + G VDV GPG + +AA++G+HV A DFS M+ + L + ++ MA EL Sbjct: 8 LAAPEPWDLVAPEYVRELLPVFETFARDALSRTGIGPGQRVVDVAAGPGTLSLLAARKGIHVTAVDFSPQMMGFLRERASKEALSIDTRIGDGMALEL 105
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A4P7R127_9SPHN (Class I SAM-dependent methyltransferase n=1 Tax=Sphingomonas sp. PAMC26645 TaxID=2565555 RepID=A0A4P7R127_9SPHN) HSP 1 Score: 57.4 bits (137), Expect = 6.640e-6 Identity = 38/100 (38.00%), Postives = 48/100 (48.00%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVMVMMAAELP 303 N+ D W + A Y+ P T+ Y L L S +DV G G AA G HV+ATDFS GM+ A++ A LP EA VM A +LP Sbjct: 4 FNKVDHWDSTAERYETTAHPYTARYVDAALAGVPLTPASRVLDVAAGTGALTFAAAATGAHVVATDFSPGMI----ARIAAKALPNVEASVMDGQALDLP 99
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7U4J6S0_9SPHN (Ubiquinone biosynthesis protein UbiE n=1 Tax=Sphingomonas hengshuiensis TaxID=1609977 RepID=A0A7U4J6S0_9SPHN) HSP 1 Score: 56.2 bits (134), Expect = 1.630e-5 Identity = 38/100 (38.00%), Postives = 48/100 (48.00%), Query Frame = 1 Query: 7 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVMVMMAAELP 303 N+ D W + A Y+K P T+ Y L L S +DV G G AA G HV+ATDFS GMV A++ A LP + VM A +LP Sbjct: 4 FNKADHWDSAAERYEKTAHPYTTRYVDAALAGVPLTPASRVLDVAAGTGALTFAAAATGAHVLATDFSPGMV----ARIAAKALPNVDTCVMDGQALDLP 99
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A520G566_9BURK (Methyltransferase domain-containing protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520G566_9BURK) HSP 1 Score: 56.2 bits (134), Expect = 1.850e-5 Identity = 32/76 (42.11%), Postives = 39/76 (51.32%), Query Frame = 1 Query: 25 WGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKAL 252 W A Y F ITS++A +L G +DV CG G AA+AA+ G V A DFS MVD AT + AL Sbjct: 20 WERAAPSYGGSFEAITSLFAKQLLDAVGAGPGIKLLDVACGSGYMAAMAAESGAQVEAVDFSPNMVDAATTRYPAL 95
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A835Z725_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z725_9STRA) HSP 1 Score: 835 bits (2157), Expect = 4.000e-304 Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 1 Query: 1 MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ 1392 MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ Sbjct: 1 MGRALPRPWDTVAAAPRGGEDVLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASIGAPGRGFSSGXXXXXXXXXXXXXXXGGSGGLDEDXXXXXXXXSGEEGEWDDFGEGVPPAGYGALDDGSDTDAGAASPSSDAHLPVDDGGDHGGFVDEAAVAXXXXXXXXXXXXAAGESYTTTVPGIINFTVQREKRDPGCVTLALLALLLQEAHVDTGAAQAQADTATPPAPPQHSGGATAGAGDPLSRALGVMLDADDGGEEQGQGDEGGVEFERLLSAVHSVRRSVQDLPDAQRRDQAAAMALRIMGMMGMGADEEDSSDEDDTHMTASDSRQQ 464
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A6H5L249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L249_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.900e-27 Identity = 71/197 (36.04%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 64 VLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRE--LPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRK---------------LQMADLFADGDE-------------MERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 564 VLLE A A+F + TKYY+ QI FW Q + +P + A+ +A G+EGII +FD+ Q+ F+ +W ++R+ A R+ V SK L + L+ A+ +GD + RR + WCLDHGFEY+EA+C + GG+ REKEGVPR+VEALQS W + Sbjct: 62 VLLEQANAKFDVFPASITTKYYNAQISFWRQAQAAVPIL-------ALRSAEQLEGLEGIIVLFDLRQESGFDEASQWAALMEDREECAFRVCVGSKLDLLPQDPGDGAGFGTGAETTLEPAESGLEGDAAXXXXXXXXXXEGLRERRRRCLGWCLDHGFEYVEADCRDSNTGGELREKEGVPRIVEALQSNVWTDM 251
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: D7FHG9_ECTSI (IRC6, uncharacterized protein interacting with AP adaptor complexes n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG9_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.460e-20 Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 130 STQIRFWEQRE--LPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRK----------------------LQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 564 S I FW Q + +P + A+ +A G+EGII VFD+ Q+ + + V +W ++R+ A R+ V SK L + L+ D A + ++ RR + WCLDHGFEY+EA+C GG+ REKEGVPR+VEALQS W + Sbjct: 4 SLTISFWRQAQAAVPVL-------ALRSAEQLEGLEGIIVVFDLRQESSLDEVAQWAALVEDREECAFRVCVGSKLDLLPEDPGDGTGFGTGAETAPEPAESGLEGGDAAA-AEGLQERRSRCLGWCLDHGFEYVEADCRDSYTGGELREKEGVPRIVEALQSNVWTGM 164
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7J7Q817_9CHLO (Alpha and gamma adaptin binding protein p34-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q817_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 4.400e-9 Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = 1 Query: 94 AQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGA---IHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIH----WCLDHGFEYIEANCCRPDLGGDTR---EKEGVPRVVEALQSTAWASI 564 A + L TKYY+ + L H+ + A A E ++ ++ VFD + + +F S R W E D++ ++LLVA+KA L++ A R ++H WC+D GFEY+EA +P + E++GV RV+ ALQ+ W + Sbjct: 52 ADYTLRLDTKYYTADV-------LVRALGTHQQDKQQQLPAHAWEQ-LQALVLVFDASSEASFVSARSWAD-ARETDSIEVKLLVANKADRLQQQSTRASSAAAGAAGSCRAPWLHDAVSWCVDKGFEYVEAAAGKPAVDAALHLEGEQQGVVRVLAALQAHLWPGM 209
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: L1J370_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J370_GUITC) HSP 1 Score: 69.7 bits (169), Expect = 5.770e-9 Identity = 44/162 (27.16%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 85 ARFAQHAWPLHT--KYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 564 +R A+ + LH KY++ +++ + VH + GE +EG+I V+D +Q++ F+S ++W + D+ D L L + VA+K L+ GD E ++ +WC+ H E++ + + D R+ EG+ RVVEA+ + W+++ Sbjct: 46 SRAARDSTVLHVENKYFNAEVK---------VKVVHSVDEVREERGEKEIEGLILVYDSSQEEGFQSFQQWLSLLDQLD-LDLLICVANKTDLLK----------GDPSELLQDAE-NWCILHQIEFVHCSALQDRFTYD-RDSEGLDRVVEAVGNHTWSNL 185
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A0D2MZC2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MZC2_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 5.200e-7 Identity = 44/120 (36.67%), Postives = 55/120 (45.83%), Query Frame = 1 Query: 223 GVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPD------LGGDTREKEGVPRVVEALQSTAWASI 564 G E +I V D T F + R W D A +RLL+A+KA A A G E WCLD GFEY+EA P L GD ++GV RV+EALQ+ W + Sbjct: 108 GAEAVILVCDATNPSTFAAARRWAAAVDSSGA-GVRLLIANKAD------AAPRAAAGGSGAALPEA-AGWCLDEGFEYVEAAAGAPAADAALALDGD---RQGVVRVLEALQAHMWPGL 216
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7S0F5E3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5E3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.620e-7 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 1 Query: 427 IHWCLDHGFEYIEANCCRPDL--GGDTREKEGVPRVVEALQSTAWAS 561 I WCLDHG+EY+EAN G D R+KEG R++EA+Q T WAS Sbjct: 1 IMWCLDHGYEYVEANLSAEGQAKGHDDRDKEGFARIIEAIQGTVWAS 47
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7S2S1P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1P7_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 6.840e-7 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 1 Query: 400 EMERRREVYIHWCLDHGFEYIEANCCRP--DLGGDTREKEGVPRVVEALQSTAWAS 561 E E+ + WCLD G+EY+EA+ G D REK+G PR++EA+Q T W+S Sbjct: 1 EYEKEYSRRVLWCLDRGYEYVEADLSEKGQSTGHDVREKDGFPRIIEAIQGTVWSS 56
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7S2K1K1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1K1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.030e-6 Identity = 30/47 (63.83%), Postives = 32/47 (68.09%), Query Frame = 1 Query: 433 WCLDHGFEYIEANCCRPD----LGGDTREKEGVPRVVEALQSTAWAS 561 WCLDHGFEYIEA C D +G D REKEG RVVEA+ ST W S Sbjct: 60 WCLDHGFEYIEA-CNLSDTSVLVGHDVREKEGFARVVEAIGSTIWTS 105
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7S1D022_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D022_CYCTE) HSP 1 Score: 59.7 bits (143), Expect = 4.140e-6 Identity = 45/154 (29.22%), Postives = 69/154 (44.81%), Query Frame = 1 Query: 112 LHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALA--LRLLVASKASHLRKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDL--GGDTREKEGVPRVVEALQSTAWAS 561 + +Y++ I E P EDG I + + + D++ AF+ + + + D LRL V H+ +L +L E E R V WCLDHG+EY+EA+ G D R+K+G R+VEA+ T W+S Sbjct: 43 ISNRYFTANISLEEIGSGPQDDNCQEDGIILV------FDSLKSNPDLSDVSAFDGLTDAHASAETLDQCGDLLRLCVGV---HIGELSPTELRGKKHEDEYSRRVL--WCLDHGYEYVEADLSDEGRHKGHDERDKDGYARIVEAIAGTVWSS 185 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4958 ID=mRNA_4958|Name=jgi.p|Trimin1|348391|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=935bp|location=Sequence derived from alignment at Contig_23:837390..839808+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTCCTGAATCAGCCCGACCCGTGGGGCGCGCACGCATCCATGTACGAback to top protein sequence of jgi.p|Trimin1|348391 >Trimin1|348391|estExt_Genemark1.C_Ctg_230096 ID=Trimin1|348391|estExt_Genemark1.C_Ctg_230096|Name=jgi.p|Trimin1|348391|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPback to top mRNA from alignment at Contig_23:837390..839808+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4958 ID=mRNA_4958|Name=jgi.p|Trimin1|348391|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2419bp|location=Sequence derived from alignment at Contig_23:837390..839808+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_23:837390..839808+ >mRNA_4958 ID=mRNA_4958|Name=jgi.p|Trimin1|348391|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_23:837390..839808+ (Tribonema minus UTEX_B_3156 )back to top |