Trimin1|348391|estExt_Genemark1.C_Ctg_230096 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348391
Unique NameTrimin1|348391|estExt_Genemark1.C_Ctg_230096
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length217
Homology
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A835Z0F3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F3_9STRA)

HSP 1 Score: 435 bits (1118), Expect = 2.870e-154
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query:    1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG 216
            MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG
Sbjct:    1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVRNCIGHICIGTKPTAGG 216          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A835Z1I3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I3_9STRA)

HSP 1 Score: 313 bits (802), Expect = 8.230e-107
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM 156
            MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM
Sbjct:    1 MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAFADHPFM 156          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7W0ZQA6_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0ZQA6_9DELT)

HSP 1 Score: 65.1 bits (157), Expect = 4.710e-9
Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGL 86
            ++ P PW   +S Y     P+   YA D L+ A   +G+  VDV CGPG  A +AAQ+G  V A DFS GM++   A+   LGL
Sbjct:    7 MSTPVPWDLLSSAYADEVVPLLERYATDALRLAAPVTGARIVDVACGPGTLAILAAQQGHLVDAIDFSAGMIERFEARRLTLGL 90          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7W0Y884_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Y884_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 1.580e-7
Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGL 86
            L  P PW   ++ Y+    P+   YA   LQ A   +G+  VDV CGPG  A +AAQ G  V A DF+  M++   A++  LGL
Sbjct:    6 LASPLPWDLVSTAYEAEVTPVFEGYARHALQLAAPANGTRLVDVACGPGTLAVLAAQAGHPVDAIDFAPRMIERLDARIAELGL 89          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: UPI001F59C105 (methyltransferase domain-containing protein n=1 Tax=Sphingobium sp. Sx8-8 TaxID=2933617 RepID=UPI001F59C105)

HSP 1 Score: 59.3 bits (142), Expect = 4.870e-7
Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVM 93
               P+ W A A  Y+K   P T+ +A   +    L  GS  +D+  G G  A  AA+ G HV+ATDFS GMV    A++ A  LP  EA+VM
Sbjct:    4 FENPNHWDAAAQHYEKTAHPFTAHFAQAAMARVALGPGSHVLDIAAGTGALALAAARTGAHVLATDFSPGMV----ARIAAARLPNVEARVM 91          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A3E2ESC3_9ACTN (Methyltransferase domain-containing protein n=13 Tax=Eggerthellaceae TaxID=1643826 RepID=A0A3E2ESC3_9ACTN)

HSP 1 Score: 58.5 bits (140), Expect = 1.150e-6
Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 0
Query:   13 ASMYDKGFAPITS-----MYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAELPGFVVPEQFPTGVPALFKAEVEAAGFQDVTVR 132
            A+ +DK  A  T+     +Y    L++A++ SG T  D+GCG G  A    + G  V+A DFSQGM+D   A+L A G+      ++    + P F V E   T V A+    +  A  +D  +R
Sbjct:   31 AAFWDKRSATFTTKDAPNLYVEKFLEYAEIRSGETVFDMGCGTGALAVPLGEAGHKVVAADFSQGMLDQMQARLDAAGVRTVFPKLMSWEDDWPAFGVREGM-TDV-AIASRSIATADLRDALLR 153          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: UPI0019D6BD85 (methyltransferase domain-containing protein n=1 Tax=Myxococcus sp. SCHIC003 TaxID=2813577 RepID=UPI0019D6BD85)

HSP 1 Score: 58.2 bits (139), Expect = 1.380e-6
Identity = 32/98 (32.65%), Postives = 47/98 (47.96%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAEL 100
            L  P+PW   A  Y +   P+   +A D L    +  G   VDV  GPG  + +AA++G+HV A DFS  M+     +     L  + ++   MA EL
Sbjct:    8 LAAPEPWDLVAPEYVRELLPVFETFARDALSRTGIGPGQRVVDVAAGPGTLSLLAARKGIHVTAVDFSPQMMGFLRERASKEALSIDTRIGDGMALEL 105          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A4P7R127_9SPHN (Class I SAM-dependent methyltransferase n=1 Tax=Sphingomonas sp. PAMC26645 TaxID=2565555 RepID=A0A4P7R127_9SPHN)

HSP 1 Score: 57.4 bits (137), Expect = 2.300e-6
Identity = 38/100 (38.00%), Postives = 48/100 (48.00%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVMVMMAAELP 101
             N+ D W + A  Y+    P T+ Y    L    L   S  +DV  G G     AA  G HV+ATDFS GM+    A++ A  LP  EA VM   A +LP
Sbjct:    4 FNKVDHWDSTAERYETTAHPYTARYVDAALAGVPLTPASRVLDVAAGTGALTFAAAATGAHVVATDFSPGMI----ARIAAKALPNVEASVMDGQALDLP 99          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A7U4J6S0_9SPHN (Ubiquinone biosynthesis protein UbiE n=1 Tax=Sphingomonas hengshuiensis TaxID=1609977 RepID=A0A7U4J6S0_9SPHN)

HSP 1 Score: 56.2 bits (134), Expect = 5.830e-6
Identity = 38/100 (38.00%), Postives = 48/100 (48.00%), Query Frame = 0
Query:    3 LNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLP-FEAKVMVMMAAELP 101
             N+ D W + A  Y+K   P T+ Y    L    L   S  +DV  G G     AA  G HV+ATDFS GMV    A++ A  LP  +  VM   A +LP
Sbjct:    4 FNKADHWDSAAERYEKTAHPYTTRYVDAALAGVPLTPASRVLDVAAGTGALTFAAAATGAHVLATDFSPGMV----ARIAAKALPNVDTCVMDGQALDLP 99          
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Match: A0A520G566_9BURK (Methyltransferase domain-containing protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520G566_9BURK)

HSP 1 Score: 56.2 bits (134), Expect = 6.500e-6
Identity = 32/76 (42.11%), Postives = 39/76 (51.32%), Query Frame = 0
Query:    9 WGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGPGVAAAIAAQRGVHVIATDFSQGMVDMATAKLKAL 84
            W   A  Y   F  ITS++A  +L       G   +DV CG G  AA+AA+ G  V A DFS  MVD AT +  AL
Sbjct:   20 WERAAPSYGGSFEAITSLFAKQLLDAVGAGPGIKLLDVACGSGYMAAMAAESGAQVEAVDFSPNMVDAATTRYPAL 95          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348391 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835Z0F3_9STRA2.870e-154100.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835Z1I3_9STRA8.230e-107100.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7W0ZQA6_9DELT4.710e-941.67Class I SAM-dependent methyltransferase n=1 Tax=De... [more]
A0A7W0Y884_9DELT1.580e-739.29Class I SAM-dependent methyltransferase n=1 Tax=De... [more]
UPI001F59C1054.870e-740.22methyltransferase domain-containing protein n=1 Ta... [more]
A0A3E2ESC3_9ACTN1.150e-632.80Methyltransferase domain-containing protein n=13 T... [more]
UPI0019D6BD851.380e-632.65methyltransferase domain-containing protein n=1 Ta... [more]
A0A4P7R127_9SPHN2.300e-638.00Class I SAM-dependent methyltransferase n=1 Tax=Sp... [more]
A0A7U4J6S0_9SPHN5.830e-638.00Ubiquinone biosynthesis protein UbiE n=1 Tax=Sphin... [more]
A0A520G566_9BURK6.500e-642.11Methyltransferase domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041698Methyltransferase domain 25PFAMPF13649Methyltransf_25coord: 44..101
e-value: 2.3E-8
score: 34.6
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 11..110
e-value: 3.0E-15
score: 57.9
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 9..106
NoneNo IPR availablePIRSRPIRSR015852-1PIRSR015852-1coord: 34..99
e-value: 0.0033
score: 14.4
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 42..87
e-value: 4.46972E-4
score: 36.6391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:837390..839524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348391mRNA_4958Tribonema minus UTEX_B_3156 mRNAContig_23 837390..839808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348391|estExt_Genemark1.C_Ctg_230096 ID=Trimin1|348391|estExt_Genemark1.C_Ctg_230096|Name=jgi.p|Trimin1|348391|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
MLLNQPDPWGAHASMYDKGFAPITSMYAFDMLQFAQLPSGSTCVDVGCGP
GVAAAIAAQRGVHVIATDFSQGMVDMATAKLKALGLPFEAKVMVMMAAEL
PGFVVPEQFPTGVPALFKAEVEAAGFQDVTVRSVSHDVVFESGKDMIDAF
ADHPFMKAVPAAMVPRAKRVIYETVTGTSIADEDGAIETLPQLREPVHVR
NCIGHICIGTKPTAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041698Methyltransf_25
IPR029063SAM-dependent_MTases_sf