mRNA_4858 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163056
Unique NamemRNA_4858
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A835YZU4_9STRA (Putative ubiquitin-conjugating enzyme E2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU4_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.250e-118
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 
Query:    1 MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM
Sbjct:    1 MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.370e-79
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A++R+NKEL+DL  DPPA CSA PIGDDLFHWQ TIMGP+DSPYAGGVF L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT PNPD+PLVPEI     S+R  HDA AREWTAKYAM
Sbjct:    2 ALKRINKELQDLGKDPPANCSAGPIGDDLFHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQALKSNRTTHDATAREWTAKYAM 147
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A397APW7_9STRA (UBC core domain-containing protein n=15 Tax=Stramenopiles TaxID=33634 RepID=A0A397APW7_9STRA)

HSP 1 Score: 238 bits (607), Expect = 4.800e-78
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A++R+NKEL DL  DPPA CSA P+GDDLFHWQ TIMGPEDSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT  NPD+PLVPEI  +Y +DRA HD  AREWTAKYAM
Sbjct:   29 ALKRINKELLDLGKDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRAKHDGTAREWTAKYAM 174
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS)

HSP 1 Score: 236 bits (603), Expect = 7.920e-78
Identity = 105/146 (71.92%), Postives = 123/146 (84.25%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            +++R+NKEL DL  DPPA CSA P+GDD+FHWQ TIMGP++SPYAGGVF LDI  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT PNPD+PLVP+I  L  +DRA HD+ AREWT+KYAM
Sbjct:    2 SLKRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A0G4EH01_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EH01_VITBC)

HSP 1 Score: 236 bits (603), Expect = 7.920e-78
Identity = 107/146 (73.29%), Postives = 121/146 (82.88%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A++R+NKEL+DL  DPPA CSA PIGDD+FHWQ TIMGP DSPYAGGV+ L+I  PSDYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSI S LT  NPD+PLVPEI  LY +DR  HDA+AREWT KYAM
Sbjct:    2 ALKRINKELQDLGKDPPANCSAGPIGDDMFHWQATIMGPSDSPYAGGVYFLNITFPSDYPFKPPKVNFTTRIYHCNINSNGSICLDILKDQWSPALTISKVLLSISSLLTDANPDDPLVPEIAHLYKTDRTRHDAVAREWTQKYAM 147
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S1U2N7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2N7_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.010e-76
Identity = 105/146 (71.92%), Postives = 123/146 (84.25%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A++R++KEL+DL SDPPA CSA P+G+DLFHWQ TIMGPEDSPYAGGVF L I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LT++KVLLSICS LT PNPD+PLVPEI  ++  DR  HD++A EWTAKYAM
Sbjct:   68 ALKRIHKELRDLGSDPPANCSAGPVGEDLFHWQATIMGPEDSPYAGGVFFLHIAFPADYPFKPPKVHFTTKIYHCNINSNGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAGIFKDDRDQHDSIASEWTAKYAM 213
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.310e-76
Identity = 102/146 (69.86%), Postives = 123/146 (84.25%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A++R+N+EL+DL  DPPA CSA P+ DDLFHWQ TIMGP+DSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LT++KVLLSICS LT PNPD+PLVPEI  +Y +D+  HD +AREWTAKYAM
Sbjct:    2 ALKRINRELQDLGGDPPANCSAGPVQDDLFHWQATIMGPDDSPYSGGVYFLNIHFPADYPFKPPKVAFTTKIYHCNINANGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAQIYRNDKTRHDQVAREWTAKYAM 147
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: R1E9A4_EMIHU (UBC core domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=R1E9A4_EMIHU)

HSP 1 Score: 232 bits (592), Expect = 3.880e-76
Identity = 100/146 (68.49%), Postives = 119/146 (81.51%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A +R+NKEL+DL  DPP+ CSA P+GDDLFHWQ TIMGP++SPY GG+F L+I  PSDYPFKPPKVTFTT +YHCN++  G IC DIL+ QWSP+LT++KVLLS+CS LT PNPD+PLVPEI  LY  DR  HD  A+EWT KYAM
Sbjct:    3 ATKRINKELQDLTKDPPSTCSAGPVGDDLFHWQSTIMGPKESPYEGGIFFLNINFPSDYPFKPPKVTFTTKIYHCNVNSNGSICLDILQSQWSPALTVSKVLLSVCSLLTDPNPDDPLVPEIARLYKQDRGKHDETAKEWTRKYAM 148
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S4C240_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C240_CHRCT)

HSP 1 Score: 233 bits (593), Expect = 4.360e-76
Identity = 102/146 (69.86%), Postives = 119/146 (81.51%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 474
            A +R+NKEL DL  DPP+ CSA P+GDDLFHWQ TIMGP+DSPY GG+F L+I  P+DYPFKPPKV F T +YHCN++  G IC DIL+ QWSP+LTI+KVLLS+CS LT PNPD+PLVPEI  LY SDRA HDA A+EWT KYAM
Sbjct:   17 ATKRINKELSDLSKDPPSTCSAGPVGDDLFHWQSTIMGPKDSPYDGGIFFLNIHFPTDYPFKPPKVQFQTKIYHCNVNGNGSICLDILQSQWSPALTISKVLLSVCSLLTDPNPDDPLVPEIAKLYKSDRAKHDATAKEWTRKYAM 162
[Close]
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: M4BZ46_HYAAE (UBC core domain-containing protein n=27 Tax=Stramenopiles TaxID=33634 RepID=M4BZ46_HYAAE)

HSP 1 Score: 233 bits (593), Expect = 8.210e-76
Identity = 104/144 (72.22%), Postives = 120/144 (83.33%), Query Frame = 1 
Query:   37 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKY 468
            A +R+NKEL+DL  DPPA CSA P+GDDLFHWQ TIMGPEDSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT  NPD+PLVPEI  +Y +DRA HDA AREWTA +
Sbjct:    2 ASKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIYFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRARHDASAREWTANW 145
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZU4_9STRA2.250e-118100.00Putative ubiquitin-conjugating enzyme E2 n=1 Tax=T... [more]
A0A835ZQ60_9STRA3.370e-7974.66Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A397APW7_9STRA4.800e-7873.29UBC core domain-containing protein n=15 Tax=Strame... [more]
B8C0C0_THAPS7.920e-7871.92Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A0G4EH01_VITBC7.920e-7873.29UBC core domain-containing protein n=1 Tax=Vitrell... [more]
A0A7S1U2N7_9STRA1.010e-7671.92Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2BUY0_9STRA1.310e-7669.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
R1E9A4_EMIHU3.880e-7668.49UBC core domain-containing protein n=3 Tax=Eukaryo... [more]
A0A7S4C240_CHRCT4.360e-7669.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
M4BZ46_HYAAE8.210e-7672.22UBC core domain-containing protein n=27 Tax=Strame... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:99289..101882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163056|e_gw1.23.34.1
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400,ko04121
KEGG rclassRC00052,RC00156
KEGG ReactionR02487,R02488,R10074
KEGG ModuleM00032
KEGG Pathwayko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,ko03430,ko04013,ko04120,ko04141,ko04624,map00071,map00310,map00362,map00380,map01100,map01120,map01130,map03430,map04013,map04120,map04141,map04624
KEGG koko:K00252,ko:K06689,ko:K10746
EC1.3.8.6,2.3.2.23
GOsGO:0000151,GO:0000152,GO:0000209,GO:0000502,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006515,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007088,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009896,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010559,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010965,GO:0016485,GO:0016567,GO:0016740,GO:0019005,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0023052,GO:0030071,GO:0030163,GO:0030674,GO:0031146,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031331,GO:0031399,GO:0031461,GO:0032182,GO:0032268,GO:0032270,GO:0032436,GO:0032446,GO:0032933,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034605,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0042221,GO:0043130,GO:0043161,GO:0043162,GO:0043170,GO:0043224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045893,GO:0045931,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051603,GO:0051604,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051983,GO:0051984,GO:0060049,GO:0060090,GO:0060255,GO:0061631,GO:0061650,GO:0062033,GO:0065007,GO:0070647,GO:0070887,GO:0071218,GO:0071310,GO:0071501,GO:0071629,GO:0071704,GO:0080090,GO:0090068,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902680,GO:1903018,GO:1903052,GO:1903364,GO:1903506,GO:1903508,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990234,GO:2000112,GO:2001141,GO:2001252
Preferred nameUBC4
Descriptionprotein modification by small protein conjugation
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5078@1|root,KOG0417@2759|Eukaryota
Evalue3.89e-80
Seed ortholog112098.XP_008610774.1
Hectar predicted targeting categoryother localisation
TranscriptId163378
TrackFilteredModels1
ProteinId163056
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163056gene_4858Tribonema minus UTEX_B_3156 geneContig_23 99289..101882 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4858_1exon_4858_1Tribonema minus UTEX_B_3156 exonContig_23 99289..99463 +
exon_4858_2exon_4858_2Tribonema minus UTEX_B_3156 exonContig_23 100483..100643 +
exon_4858_3exon_4858_3Tribonema minus UTEX_B_3156 exonContig_23 101742..101882 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4858CDS_4858Tribonema minus UTEX_B_3156 CDSContig_23 99289..99463 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163056Trimin1|163056|e_gw1.23.34.1Tribonema minus UTEX_B_3156 polypeptideContig_23 99289..101882 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4858 ID=mRNA_4858|Name=jgi.p|Trimin1|163056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_23:99289..101882+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCTGTGCTATATTTTGAATCCATAAAGGGAGCCGTAAGGCGGTT
GAATAAGGAGTTGAAGGACCTGAAAAGCGACCCGCCTGCATACTGCAGCG
CGTGCCCCATCGGAGATGACCTGTTTCACTGGCAGGGGACCATCATGGGG
CCCGAAGACAGCCCATATGCTGGGGGTGTCTTCTGTCTGGACATTATTAT
CCCCTCGGATTACCCCTTCAAGCCGCCCAAGGTGACCTTCACGACGCACG
TCTACCATTGCAACATTGACGATAAAGGCTTCATCTGTGCGGACATTCTT
AAGGACCAGTGGAGTCCATCGCTCACAATAACCAAGGTGCTTTTGTCAAT
CTGCTCGTTCCTGACCACCCCGAACCCCGACGAACCCCTCGTGCCGGAAA
TTGGGCTCTTGTACAACAGCGATCGCGCCCTGCACGACGCGATGGCGCGC
GAGTGGACTGCCAAGTATGCCATGTGA
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protein sequence of jgi.p|Trimin1|163056

>Trimin1|163056|e_gw1.23.34.1 ID=Trimin1|163056|e_gw1.23.34.1|Name=jgi.p|Trimin1|163056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMG
PEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADIL
KDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAR
EWTAKYAM*
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mRNA from alignment at Contig_23:99289..101882+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4858 ID=mRNA_4858|Name=jgi.p|Trimin1|163056|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2594bp|location=Sequence derived from alignment at Contig_23:99289..101882+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCTGTGCTATATTTTGAATCCATAAAGGGAGCCGTAAGGCGGTT
GAATAAGGAGTTGAAGGACCTGAAAAGCGACCCGCCTGCATACTGCAGCG
CGTGCCCCATCGGAGATGACCTGTTTCACTGGCAGGGGACCATCATGGGG
CCCGAAGACAGCCCATATGCTGGGGGTGAGATGTTGATCCAGAAAACGTA
TATTCGCCACTGAGCTGGCCAACCAGCGCACGCCTGCATGGCTATTTGGA
CTTTCATGACCCCTTCTTGTGCCACGGTATCGAGTTGTGAGTTTGGATTT
GTCCTTGTAGCAAATGTAGGTTGTGAGAATGCCACTATTTTGACTCGAGT
CCTCCAAATGGCAGTGTATACCTTCTAGTACCAAACGCAGCGCCCCAGCC
ACGTGGCCGAGCGCCAGCCTCACAATTAAGGTCCACTCGTTATTCGATAC
CCAACCGGTCCGCATGTCCTATTCCTGCACCAGTCGCATAAACGTCTTGT
TGCTGAGTAAGTGCAGCTACTTGCAACGACTACAAAAAGGTACTTCAATG
TCTTGGCACACTGGCAGTTGCAGGCTGGTGTCGTGTACATAACAACGCAG
CGACTGCAATGTTTTTTCTGTATGTTGCCAGAAGCGCCAGCGGTCAAGGA
CCTGCGTTCAAGAACGCTCGCCTGTTTGCGAGATTTGCACGATACACCAA
CACATGGCGCGAATGCTGCATGCCGCTCTCACCTACGTGGCTGACATGAT
GCTCCTGCCATGTGTAACAATGTCAACACTCACACAATGCAGGGTGGCTG
ATAGTATGCACTTTCACATGGACAAGCCCTGATACATCCGTCATCCCTGC
AACGGATACGCCGCTAAACATAGAACATTCCCATCACACATGAAAGGATG
GGTGCTAAGCGTGGGGCCATGCGCTGCCATGTTAATCGCATTCGCATTCA
TGTGCTGCTGAACATGAACATGCCGATCACATATGCAGCGTCAACCAATT
TGCACGCCCTATGGAGAAACCGCTCACATGTCAATCGCACCTGACCCAAA
TGCGCTACCCCTACTCAAACTTCTGGTGCCCATTGAGCAGAATGAGTGGT
GACATTCCTGTCACACCTGAAAGATGTGCGGAGCAACACAAATCAAATGC
TGCTTTCCTTTCAACATTTTTATCTTGCCGCCCACCACTCTCAGGTGTCT
TCTGTCTGGACATTATTATCCCCTCGGATTACCCCTTCAAGCCGCCCAAG
GTGACCTTCACGACGCACGTCTACCATTGCAACATTGACGATAAAGGCTT
CATCTGTGCGGACATTCTTAAGGACCAGTGGAGTCCATCGCTCACAATAA
CCAAGGTGCGAGCGTTTGTGAGATATGACGAATTGGAATAAAGATTGCAG
GGTGCTTTCAAAAGGTGGCAGAGTGTTACCATAGCCAATTTGCCCGCAAT
GGAGATGACCAGCACATGGTAGCGGTAAGCACTATGTACTGCATATTGAA
GCTCCCCTATAAAGTTCCATGCAGAGCTGCACGAAGGTACCTCACTCTCA
GAACAGAATGGTCTGCAAGGAGGACGGCCGATGGTCAGAGACCGTATGAA
GTGCTTGGAGACTTGCAGTACTACGAGAGGGCAAGCTGGAGACCAAGAGC
TGTGGGTATTTCTAGTATGTGTACATTGACGACCCAAAATTCAATAACTT
CAAGTCATGACCTGAACATAGTGATATACACTTAAGAGGTACACGTAAGC
ATCTCGAGCTTCTTGGTCCATTTTCATGAAGGCACGCAGTTGTCATTACC
CATGATCCCTGATTTGTAGAAAATGTGGCTAAAGAGAGAGCATCTTCCAC
AAGTACTCTCTGACTTAACGAAAGACGTAGAACCAACTGCTTTGACGAGC
TCAGAGAAGGATCAGGCTGCAACAACATTACAACATGGCTGCAACGCACA
TTTCATTGCAAGTTTTCACGAAAGTACACACCATTCACTAAAAAAAGTAC
ACCTTAGGGTAACCCTTTCACTGCACTCAGATGTGGCACTTGTGCGTATT
CCGTCTGCCACCGTGAGCTCTGCTGCTGGTCTTGACAAGTGTGTATGCGC
AACCTGTAGAGCACGGTACCCTATGTATGCGCGCACAATGAACTAAAGTG
GAACGGGCTTCACAACAAGTTATCACCGCTGCTGCTGCTTCTGCTGCATT
GCCTAGGTGCTACTTTCAGTCTGCTCCTCGCTGCCCAATACATATTCACA
ACAATCCCACACTGCTCCTGCAGCGCTGCTGCCGCAGCGCTCTGGTACTT
CCGTCGATCTGCTTCTTGCTGACCGGCCCGCACCCGCAACGTTTCCATCA
TGCTGCTGCTGCTGCTGCTGCTTACCGGCCCGCACCCGCAACGTTTCCAT
CGTGCTTCTGCTGCTGCTGCTTCTGCTGCTGCTGCTGCTGCTTCGTTCTC
TAGGTGCTTTTGTCAATCTGCTCGTTCCTGACCACCCCGAACCCCGACGA
ACCCCTCGTGCCGGAAATTGGGCTCTTGTACAACAGCGATCGCGCCCTGC
ACGACGCGATGGCGCGCGAGTGGACTGCCAAGTATGCCATGTGA
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Coding sequence (CDS) from alignment at Contig_23:99289..101882+

>mRNA_4858 ID=mRNA_4858|Name=jgi.p|Trimin1|163056|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_23:99289..101882+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCTGTGCTATATTTTGAATCCATAAAGGGAGCCGTAAGGCGGTT
GAATAAGGAGTTGAAGGACCTGAAAAGCGACCCGCCTGCATACTGCAGCG
CGTGCCCCATCGGAGATGACCTGTTTCACTGGCAGGGGACCATCATGGGG
CCCGAAGACAGCCCATATGCTGGGGGTGTCTTCTGTCTGGACATTATTAT
CCCCTCGGATTACCCCTTCAAGCCGCCCAAGGTGACCTTCACGACGCACG
TCTACCATTGCAACATTGACGATAAAGGCTTCATCTGTGCGGACATTCTT
AAGGACCAGTGGAGTCCATCGCTCACAATAACCAAGGTGCTTTTGTCAAT
CTGCTCGTTCCTGACCACCCCGAACCCCGACGAACCCCTCGTGCCGGAAA
TTGGGCTCTTGTACAACAGCGATCGCGCCCTGCACGACGCGATGGCGCGC
GAGTGGACTGCCAAGTATGCCATGTGA
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