Trimin1|163056|e_gw1.23.34.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163056
Unique NameTrimin1|163056|e_gw1.23.34.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length159
Homology
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A835YZU4_9STRA (Putative ubiquitin-conjugating enzyme E2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU4_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.250e-118
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query:    1 MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM
Sbjct:    1 MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.370e-79
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A++R+NKEL+DL  DPPA CSA PIGDDLFHWQ TIMGP+DSPYAGGVF L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT PNPD+PLVPEI     S+R  HDA AREWTAKYAM
Sbjct:    2 ALKRINKELQDLGKDPPANCSAGPIGDDLFHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQALKSNRTTHDATAREWTAKYAM 147          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A397APW7_9STRA (UBC core domain-containing protein n=15 Tax=Stramenopiles TaxID=33634 RepID=A0A397APW7_9STRA)

HSP 1 Score: 238 bits (607), Expect = 4.800e-78
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A++R+NKEL DL  DPPA CSA P+GDDLFHWQ TIMGPEDSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT  NPD+PLVPEI  +Y +DRA HD  AREWTAKYAM
Sbjct:   29 ALKRINKELLDLGKDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRAKHDGTAREWTAKYAM 174          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS)

HSP 1 Score: 236 bits (603), Expect = 7.920e-78
Identity = 105/146 (71.92%), Postives = 123/146 (84.25%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            +++R+NKEL DL  DPPA CSA P+GDD+FHWQ TIMGP++SPYAGGVF LDI  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT PNPD+PLVP+I  L  +DRA HD+ AREWT+KYAM
Sbjct:    2 SLKRINKELVDLGKDPPANCSAGPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQLLKTDRARHDSTAREWTSKYAM 147          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A0G4EH01_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EH01_VITBC)

HSP 1 Score: 236 bits (603), Expect = 7.920e-78
Identity = 107/146 (73.29%), Postives = 121/146 (82.88%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A++R+NKEL+DL  DPPA CSA PIGDD+FHWQ TIMGP DSPYAGGV+ L+I  PSDYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSI S LT  NPD+PLVPEI  LY +DR  HDA+AREWT KYAM
Sbjct:    2 ALKRINKELQDLGKDPPANCSAGPIGDDMFHWQATIMGPSDSPYAGGVYFLNITFPSDYPFKPPKVNFTTRIYHCNINSNGSICLDILKDQWSPALTISKVLLSISSLLTDANPDDPLVPEIAHLYKTDRTRHDAVAREWTQKYAM 147          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S1U2N7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2N7_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.010e-76
Identity = 105/146 (71.92%), Postives = 123/146 (84.25%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A++R++KEL+DL SDPPA CSA P+G+DLFHWQ TIMGPEDSPYAGGVF L I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LT++KVLLSICS LT PNPD+PLVPEI  ++  DR  HD++A EWTAKYAM
Sbjct:   68 ALKRIHKELRDLGSDPPANCSAGPVGEDLFHWQATIMGPEDSPYAGGVFFLHIAFPADYPFKPPKVHFTTKIYHCNINSNGGICLDILKDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAGIFKDDRDQHDSIASEWTAKYAM 213          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.310e-76
Identity = 102/146 (69.86%), Postives = 123/146 (84.25%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A++R+N+EL+DL  DPPA CSA P+ DDLFHWQ TIMGP+DSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LT++KVLLSICS LT PNPD+PLVPEI  +Y +D+  HD +AREWTAKYAM
Sbjct:    2 ALKRINRELQDLGGDPPANCSAGPVQDDLFHWQATIMGPDDSPYSGGVYFLNIHFPADYPFKPPKVAFTTKIYHCNINANGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAQIYRNDKTRHDQVAREWTAKYAM 147          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: R1E9A4_EMIHU (UBC core domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=R1E9A4_EMIHU)

HSP 1 Score: 232 bits (592), Expect = 3.880e-76
Identity = 100/146 (68.49%), Postives = 119/146 (81.51%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A +R+NKEL+DL  DPP+ CSA P+GDDLFHWQ TIMGP++SPY GG+F L+I  PSDYPFKPPKVTFTT +YHCN++  G IC DIL+ QWSP+LT++KVLLS+CS LT PNPD+PLVPEI  LY  DR  HD  A+EWT KYAM
Sbjct:    3 ATKRINKELQDLTKDPPSTCSAGPVGDDLFHWQSTIMGPKESPYEGGIFFLNINFPSDYPFKPPKVTFTTKIYHCNVNSNGSICLDILQSQWSPALTVSKVLLSVCSLLTDPNPDDPLVPEIARLYKQDRGKHDETAKEWTRKYAM 148          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: A0A7S4C240_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C240_CHRCT)

HSP 1 Score: 233 bits (593), Expect = 4.360e-76
Identity = 102/146 (69.86%), Postives = 119/146 (81.51%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKYAM 158
            A +R+NKEL DL  DPP+ CSA P+GDDLFHWQ TIMGP+DSPY GG+F L+I  P+DYPFKPPKV F T +YHCN++  G IC DIL+ QWSP+LTI+KVLLS+CS LT PNPD+PLVPEI  LY SDRA HDA A+EWT KYAM
Sbjct:   17 ATKRINKELSDLSKDPPSTCSAGPVGDDLFHWQSTIMGPKDSPYDGGIFFLNIHFPTDYPFKPPKVQFQTKIYHCNVNGNGSICLDILQSQWSPALTISKVLLSVCSLLTDPNPDDPLVPEIAKLYKSDRAKHDATAKEWTRKYAM 162          
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Match: M4BZ46_HYAAE (UBC core domain-containing protein n=27 Tax=Stramenopiles TaxID=33634 RepID=M4BZ46_HYAAE)

HSP 1 Score: 233 bits (593), Expect = 8.210e-76
Identity = 104/144 (72.22%), Postives = 120/144 (83.33%), Query Frame = 0
Query:   13 AVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMGPEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADILKDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAREWTAKY 156
            A +R+NKEL+DL  DPPA CSA P+GDDLFHWQ TIMGPEDSPY+GGV+ L+I  P+DYPFKPPKV FTT +YHCNI+  G IC DILKDQWSP+LTI+KVLLSICS LT  NPD+PLVPEI  +Y +DRA HDA AREWTA +
Sbjct:    2 ASKRINKELQDLGRDPPANCSAGPVGDDLFHWQATIMGPEDSPYSGGVYFLNIYFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQIYRTDRARHDASAREWTANW 145          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163056 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZU4_9STRA2.250e-118100.00Putative ubiquitin-conjugating enzyme E2 n=1 Tax=T... [more]
A0A835ZQ60_9STRA3.370e-7974.66Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A397APW7_9STRA4.800e-7873.29UBC core domain-containing protein n=15 Tax=Strame... [more]
B8C0C0_THAPS7.920e-7871.92Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A0G4EH01_VITBC7.920e-7873.29UBC core domain-containing protein n=1 Tax=Vitrell... [more]
A0A7S1U2N7_9STRA1.010e-7671.92Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2BUY0_9STRA1.310e-7669.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
R1E9A4_EMIHU3.880e-7668.49UBC core domain-containing protein n=3 Tax=Eukaryo... [more]
A0A7S4C240_CHRCT4.360e-7669.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
M4BZ46_HYAAE8.210e-7672.22UBC core domain-containing protein n=27 Tax=Strame... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availableSMARTSM00212ubc_7coord: 15..158
e-value: 3.6E-61
score: 219.2
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 14..156
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 14..156
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 5..158
e-value: 1.9E-63
score: 214.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 11..158
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 16..152
e-value: 2.5E-45
score: 153.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 12..158
score: 50.876476
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 14..153
e-value: 1.11078E-63
score: 190.106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:99289..101882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163056mRNA_4858Tribonema minus UTEX_B_3156 mRNAContig_23 99289..101882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163056|e_gw1.23.34.1 ID=Trimin1|163056|e_gw1.23.34.1|Name=jgi.p|Trimin1|163056|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
MAAVLYFESIKGAVRRLNKELKDLKSDPPAYCSACPIGDDLFHWQGTIMG
PEDSPYAGGVFCLDIIIPSDYPFKPPKVTFTTHVYHCNIDDKGFICADIL
KDQWSPSLTITKVLLSICSFLTTPNPDEPLVPEIGLLYNSDRALHDAMAR
EWTAKYAM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2