mRNA_4575 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349606
Unique NamemRNA_4575
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A836CC84_9STRA (Hypothetical UPF0043 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC84_9STRA)

HSP 1 Score: 733 bits (1891), Expect = 7.780e-265
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 1
Query:    1 MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQRNRSGXXXXXXXXXXXXXXXLTAAGGVDMGVYIAESWAFNGALFRALGEYSDPAKAPEPQ 1239
            MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQRNRSGXXXXXXXXXXXXXXXLTAAGGVDMGVYIAESWAFNGALFRALGEYSDPAKAPEPQ
Sbjct:    1 MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQRNRSGXXXXXXXXXXXXXXXLTAAGGVDMGVYIAESWAFNGALFRALGEYSDPAKAPEPQ 413          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: D7G0Q8_ECTSI (Hypothetical UPF0043 protein slr0305 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q8_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 7.070e-105
Identity = 199/430 (46.28%), Postives = 258/430 (60.00%), Query Frame = 1
Query:   22 HVKIWSSRRTMIRGALYTARAAAAVRGKFGG-DGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSS--------------------GGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQ-RNRSGXXXXXXXXXXXXXXXLTAAGG---------VDMGVYIAESWAFNGALFRALGEYSDP 1218
            H+++W SRR M R  L  A+A    R    G D + DS     K +++++A A+A  AAT+R+GGRAAL+S LGLDF  D+GIK +++  L F    G  +Y  F  GW+ +KT C DFLS++LAL SG++FGGV++GA  S  CAT+AS +GFQLART LR +V EQ+EKRPALRA+E+ VS+ GFKTV+TLRLAP+LPIPLGAYNYVYG TSL L  F +G  +GS+KPYLLDSYLGVFGK +VDG        D  L+GTF V VL+GT AS++A RTW+EL+AEA  S                    GGG GD     L W ++ GI R  LP     W  K +A    I GVV++E E ++ R  +                L   G           D+G Y++ES  F   L  +  EYS+P
Sbjct:   71 HIEVWDSRRDMTRATLSAAKALRGARESIAGEDVATDSLVEDGKGSLVISAIALAVAAATLRLGGRAALVSALGLDFGEDTGIKENVESFLAFFDGLGPVRYAYFLGGWVVAKTFCVDFLSIVLALGSGVVFGGVLQGALVSTACATIASGLGFQLARTTLRTQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGTTSLPLPVFLSGMAVGSLKPYLLDSYLGVFGKQMVDGEAGVG--GDLALVGTFFVVVLVGTFASQVASRTWEELNAEAEKSMPTAAETNTPPGGVPSASQEGGGGGDG----LEWLDLWGIERSSLPDWFTTWKAKDNAVRSKIRGVVKQEREYMEGREAAEGEGVDGAELPPKESGLPPPGPPLLDESGRFFDLGAYVSESTVFPFVLIESFWEYSNP 494          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A7S1T2A1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2A1_9CHLO)

HSP 1 Score: 269 bits (687), Expect = 2.720e-82
Identity = 161/309 (52.10%), Postives = 200/309 (64.72%), Query Frame = 1
Query:  145 AKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVY-KYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGV-TSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAE-------ASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEE 1044
            A  AV  TAFAVA GA  +R+GGRAALLSV GLDF+ D+G++  +D  + +    G Y K  +FA  W  +K  C D L V+LA+ SG+LFGGV +G  AS  CAT+ S   F L RT LR+RV  +VEKR ALRAVERAVS  GF+TVLTLRLAP+LPIPLG Y+YVYG  TSL+L EF AGT + S+KPY LD+YLG+F KS+VDG       NDAVLL TFAV VLIGTLAS++A RTW+E+ AE       A   G G          W  ++G   DE  P  R W    ++A   +W +++ E
Sbjct:   37 AVGAVATTAFAVAVGATVLRVGGRAALLSVAGLDFIRDTGLRDQVDQAVAYADGLGPYGKVAVFAGAWCVTKIACLDALGVVLAISSGVLFGGVWQGGLASATCATIGSAAAFGLGRTVLRERVAPEVEKRAALRAVERAVSTDGFRTVLTLRLAPVLPIPLGMYSYVYGASTSLALPEFLAGTLVASLKPYTLDAYLGIFAKSVVDGEPGD---NDAVLLATFAVVVLIGTLASQIATRTWEEVQAELALEEEQAKKDGKGVEAEDGGGFAWMGLLGQKADEDGP--RLW---LTSAWDRLWAILELE 337          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A8J9SGT0_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SGT0_PHATR)

HSP 1 Score: 242 bits (617), Expect = 1.590e-72
Identity = 148/307 (48.21%), Postives = 187/307 (60.91%), Query Frame = 1
Query:    1 MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVR------GKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAG-----VYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR--TQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAE 882
            + K E   +++W SRR  IR  L +A      R       + G DG P  +    K A+ LTAF +AAGA  +RIGGRAAL+S LGLDF+ ++     L   LD V N       V K LLF A W A K LC D   V LAL SGILFGGV++GA  S   AT  S V F LA+  T LR + +  +++ P+LR +E+ V+K GFK +LTLRLAPLLPIP+GAYNY+Y +T++ L +F  G F+GS+KPYLLDSYLG FGKSLVDG        D +LL     +VLIG  AS+LA  TWD +  E
Sbjct:   69 LMKEESVRLQVWKSRRNQIRQTLKSADQVRIFRLQQGWVPELGDDGKPLKSDG--KVALTLTAFVIAAGAIALRIGGRAALVSTLGLDFVTENP---ELKANLDIVLNTADSMDPVTKLLLFTASWTAVKVLCFDAAGVALALSSGILFGGVLQGAVVSAAAATFGSTVAFGLAKLDTPLRKKGLGLLDEYPSLRGIEKVVAKEGFKAILTLRLAPLLPIPIGAYNYIYSITNVPLLDFCGGIFIGSLKPYLLDSYLGYFGKSLVDGTADQNGWQDTLLLAALGFSVLIGVFASQLASETWDSVLEE 370          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A4D9CWB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWB6_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.010e-72
Identity = 141/315 (44.76%), Postives = 199/315 (63.17%), Query Frame = 1
Query:  148 KNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAG-VYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLP-IPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLV-------DGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQRN 1065
            KNAV+ TA  VA   A  R+GGRAA++S++GLD +AD+G+ G L   LD V+  G   + L+F + W+ +K LC D L+++L L SGILFGGV EGA +S VCAT AS +GF LART LR++V+ Q+ KRP LRA+ERAV++ G K V T RL+PL+P +P+G YNY+YGV+S+S+ +F  G F GS+KPY LD+YLGV+GK L+       +G          +L GTF + VL+G LA ++AGR +DE   EA ++         A   W  MMG+ R +      +W        G +   V++EW++L  +
Sbjct:   16 KNAVVATALLVAVVTAVARLGGRAAVMSMMGLDILADAGVTGKLTSVLDMVEGMGEAERLLIFFSLWVVAKNLCLDGLALVLGLSSGILFGGVWEGALSSTVCATGASFIGFMLARTYLREQVLSQLNKRPLLRALERAVARDGLKAVFTFRLSPLVPALPIGGYNYLYGVSSVSIFDFLVGIFAGSLKPYFLDAYLGVWGKDLLSVNEAGGEGGGGVDIAQTVILSGTFFLLVLVGALAGQIAGRAFDEAKHEALTTVPLKEGETEAQWDWWTMMGVERPKGNVWTEEW--------GRLETAVEDEWKKLMED 322          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: B5Y532_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y532_PHATC)

HSP 1 Score: 243 bits (619), Expect = 6.070e-71
Identity = 148/304 (48.68%), Postives = 190/304 (62.50%), Query Frame = 1
Query:    1 MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVR------GKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSG-IKGSLDGGLDFVQNAG-VYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR--TQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAE 882
            + K E   +++W SRR  IR  L +A      R       + G DG P  +    K A+ LTAF +AAGA  +RIGGRAAL+S LGLDF+ ++  +K +LD  L+   N   V K LLF A W A K LC D   V LAL SGILFGGV++GA  S   AT  S V F LA+  T LR + +  +++ P+LR +E+ V+K GFK +LTLRLAPLLPIP+GAYNY+Y +T++ L +F  G F+GS+KPYLLDSYLG FGKSLVDG        D +LL     +VLIG  AS+LA  TWD +  E
Sbjct:  232 LMKEESVRLQVWKSRRNQIRQTLKSADQVRIFRLQQGWVPELGDDGKPLKSDG--KVALTLTAFVIAAGAIALRIGGRAALVSTLGLDFVTENPELKANLDIVLNTADNMDPVTKLLLFTASWTAVKVLCFDAAGVALALSSGILFGGVLQGAVVSAAAATFGSTVAFGLAKLDTPLRKKGLGLLDEYPSLRGIEKVVAKEGFKAILTLRLAPLLPIPIGAYNYIYSITNVPLLDFCGGIFIGSLKPYLLDSYLGYFGKSLVDGTADQNGWQDTLLLAALGFSVLIGVFASQLASETWDSVLEE 533          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A7S1TUG8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUG8_9STRA)

HSP 1 Score: 231 bits (590), Expect = 8.510e-69
Identity = 122/234 (52.14%), Postives = 160/234 (68.38%), Query Frame = 1
Query:  151 NAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELA 852
            +A+   AF  A  A  +R+GGRAALL++LGLD + D GIK +LD  L    + GV+K + F A W  +K LC DFL V+LA  +GILFGGV++GA AS  CA + SV  F + R+ L ++V  ++++ P LRA+E AV+  G++ V TLRLAP+LP+P+GAY Y+YG+T L+L +F  GTFLGSIKPYLLDSYLGVFGKSLVD         D +L+GTFA  V     AS LA
Sbjct:  113 SAIAAAAFVAAGSAVLLRVGGRAALLNMLGLDMLQDEGIKANLDQLLHTADDLGVFKIVFFTAAWTVAKVLCFDFLGVLLAFSAGILFGGVLQGAFASCACAAIGSVAAFGITRSLLAEKVRGRLDEAPGLRAIENAVADEGYRAVFTLRLAPILPLPVGAYAYIYGLTRLTLPDFMVGTFLGSIKPYLLDSYLGVFGKSLVDAPEAAGSMTDVLLVGTFAAVVXXXXXASRLA 346          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: A0A448ZP55_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP55_9STRA)

HSP 1 Score: 236 bits (603), Expect = 3.380e-68
Identity = 145/302 (48.01%), Postives = 196/302 (64.90%), Query Frame = 1
Query:    7 KIEDEHVKIWSSRR----TMIRGA--LYTARAAAAVRGKFGGDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSG-IKGSLDGGLDFVQNAG-VYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR--TQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAE 882
            +IE+  ++IW++RR    +M++GA  L   R A     +   DG+P  T A  K AV LTAFAVAAGA  +R+GGRAAL+S +GLDF+ D+  ++  ++  L + ++   V K  LF  GW   KTLC D   ++LA  SGILFGGV++GA  S + AT+ S V F LA+  T +R++ IE VE+ P+LR +E+ V+  G K VLT RLAP+LPIPLG YNYVYG+T++   +F  G FLGS+KPY LDSYLG  GKSLVDG        D VL+G   ++VLIG  AS+LA  TW+ +  E
Sbjct:   52 QIEEARLRIWNNRRGEVRSMLKGAESLRNFRLANGFTPELDEDGNP--TKADGKTAVTLTAFAVAAGAIVLRVGGRAALVSAVGLDFVNDNPEMQEQINQVLQYAESVDPVLKTGLFWLGWTFVKTLCFDAGGIVLAFASGILFGGVLQGAIMSALGATIGSSVAFALAKADTPVREKAIEIVEENPSLRGLEKVVADEGLKAVLTFRLAPVLPIPLGMYNYVYGITNVRFVDFAGGIFLGSLKPYFLDSYLGYVGKSLVDGSASEGGLQDYVLIGVLGLSVLIGVFASQLASETWEAIQKE 351          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: K0R0H6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0H6_THAOC)

HSP 1 Score: 234 bits (597), Expect = 2.330e-67
Identity = 165/427 (38.64%), Postives = 230/427 (53.86%), Query Frame = 1
Query:   10 IEDEHVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPD---STG----AAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSG-IKGSLDGGLDFVQNAGVYKYL-LFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR--TQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWD----ELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWE---------RLQRNRSGXXXXXXXXXXXXXXXLTAAGGVDMGVYIAESWAFNGALFRALGEYSDP 1218
            +E+  +K++S RR  IR  L  A +    R     D  P+    TG    +  K+AV +TAF VA GA  +R+GGRAAL+S LGLDF +++  +K  L+  L +    G    L LF   W   K  C D   V+LAL SGILFGGV++GA  S   AT+ S   F LA+  T +R + ++ VE+ P+LR +E+ V+K G K +LTLRLAP+LPIP+G YNYVYGVT++   +F  G FLGS+KPYLLDSYLGVFGK +VDG        D +LL    V+VLIG  AS+LA  TWD    E+ A+ +     + D     +   E MG+    LP  + ++     AA+  +  +++EE E          L+ N                  L A  G ++G  I      + AL +A  +Y+DP
Sbjct:   75 VEEARLKVFSDRRRTIRWVLKNAESTKNYR--IANDLVPELDPETGKPIKSDGKSAVTITAFVVAGGAVLLRLGGRAALVSALGLDFASENPELKDGLESVLGYANTMGTESELFLFILAWTVVKVFCFDAGGVVLALASGILFGGVIQGAVVSAFAATVGSSAAFGLAKIDTPVRKKALDLVEEYPSLRGIEKVVAKDGLKAILTLRLAPVLPIPIGLYNYVYGVTNVPYLQFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTTQDGGLQDFLLLVALGVSVLIGVFASQLAEETWDSINEEVEAKKAEISESEDDEEGGVM--TEFMGVG---LPQFIVKFQQALQAADERVNKLIEEEMEAKVWNCTMAELEENPKNPAKQPDSIEV-----LEANQGFNIGADICNGLCLSPALLKAYLKYADP 489          
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Match: B8CC46_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC46_THAPS)

HSP 1 Score: 233 bits (593), Expect = 2.450e-67
Identity = 163/425 (38.35%), Postives = 227/425 (53.41%), Query Frame = 1
Query:   13 EDEHVKIWSSRRTMIRGALYTARAAAAVRGKFG-------GDGSPDSTGAAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSG-IKGSLDGGLDFVQNAGVYKYL-LFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR--TQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXX-NDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGGGDGDAAAAPLRWNEMMGIARDELPPPVRQW----DDKTSAAEGLIWGVVQEEWERLQRNRSGXXXXXXXXXXXXXXX-------LTAAGGVDMGVYIAESWAFNGALFRALGEYSDP 1218
            E+  +K+ + RR  IRG L  A ++   R + G         G P S+ +  K+AV +TAF VAAGA  +RIGGRAAL+S LGLDF  ++  ++  L+  L +    G    L LF   W A K  C D   V+LAL SGILFGGV +GA  S   AT+ S + F +A+  T +R + +E V++ P+LR +E+ V+K G K +LTLRLAP+LPIPLG YNYVYGVT++   +F  G FLGS+KPYLLDSYLGVFGK +VDG         DA+LL    V+VLIG  AS+LA  TW+ ++ E          A       ++  GI R+ +   V +W         AA+  +  ++++E+     N +                       + A  G D G  I +    + AL  A   Y+DP
Sbjct:   14 EESRMKVLTDRRKSIRGILKAAESSKNFRLQNGYVPELDPDTGKPISSDS--KSAVAITAFVVAAGAVALRIGGRAALVSALGLDFATENPELREGLNSVLQYADTVGTETELALFILAWTAVKVFCFDAGGVVLALASGILFGGVWQGAVVSAFAATVGSSIAFGMAKLDTPVRKKALEVVDEYPSLRGIEKVVAKDGLKAILTLRLAPVLPIPLGIYNYVYGVTNVPYLDFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTAGEVGSLQDALLLVALGVSVLIGVFASQLANETWESINEEVEREKAEKAAAEGEGGEIDDYDGITREFMGMDVPKWIIGFQLALQAADKRVNTMIEDEYHAKVWNYTAEELESPSSTVINPATQPDSPEVVNANTGFDFGASICDGLVLSPALLGAYLRYADP 436          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349606 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC84_9STRA7.780e-265100.00Hypothetical UPF0043 protein n=1 Tax=Tribonema min... [more]
D7G0Q8_ECTSI7.070e-10546.28Hypothetical UPF0043 protein slr0305 n=2 Tax=Ectoc... [more]
A0A7S1T2A1_9CHLO2.720e-8252.10Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A8J9SGT0_PHATR1.590e-7248.21Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A4D9CWB6_9STRA2.010e-7244.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B5Y532_PHATC6.070e-7148.68Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7S1TUG8_9STRA8.510e-6952.14Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A448ZP55_9STRA3.380e-6848.01Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
K0R0H6_THAOC2.330e-6738.64Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8CC46_THAPS2.450e-6738.35Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:179846..181750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349606|estExt_Genemark1.C_Ctg_460033
Descriptioncanonical Wnt signaling pathway involved in osteoblast differentiation
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0398@1|root,KOG3140@2759|Eukaryota
Evalue2.37e-106
Seed ortholog2880.D7G0Q8
Hectar predicted targeting categoryother localisation
TranscriptId349928
TrackFilteredModels1
ProteinId349606
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349606gene_4575Tribonema minus UTEX_B_3156 geneContig_46 179846..181750 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4575_3exon_4575_3Tribonema minus UTEX_B_3156 exonContig_46 179846..180549 -
exon_4575_2exon_4575_2Tribonema minus UTEX_B_3156 exonContig_46 180857..180930 -
exon_4575_1exon_4575_1Tribonema minus UTEX_B_3156 exonContig_46 181176..181750 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4575UTR3_4575Tribonema minus UTEX_B_3156 three_prime_UTRContig_46 179846..179956 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4575CDS_4575Tribonema minus UTEX_B_3156 CDSContig_46 181176..181750 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349606Trimin1|349606|estExt_Genemark1.C_Ctg_460033Tribonema minus UTEX_B_3156 polypeptideContig_46 179957..181750 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4575 ID=mRNA_4575|Name=jgi.p|Trimin1|349606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1353bp|location=Sequence derived from alignment at Contig_46:179846..181750- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAAAATAGAGGATGAGCACGTCAAGATCTGGAGCAGCCGTCGCAC
CATGATCAGAGGTGCCCTGTACACAGCGCGCGCAGCAGCGGCGGTGCGGG
GCAAGTTCGGCGGCGACGGCAGCCCCGATAGCACCGGCGCCGCCGCCAAA
AACGCCGTGCTGCTCACCGCCTTTGCGGTGGCCGCCGGCGCCGCCACCAT
ACGGATAGGCGGCCGCGCCGCTCTCCTGAGCGTGCTGGGTCTAGACTTCA
TGGCAGACTCTGGCATCAAAGGCAGCCTGGACGGCGGCCTCGACTTCGTG
CAGAACGCGGGCGTCTACAAGTACCTGCTCTTCGCGGCGGGCTGGCTCGC
CAGCAAGACGCTGTGCGCCGACTTCCTGTCCGTCATACTCGCGCTGATCA
GCGGCATCCTGTTTGGGGGGGTGGTGGAGGGGGCCGCGGCGAGCGTCGTG
TGCGCGACGCTGGCGTCCGTGGTGGGCTTCCAGCTGGCGCGCACGCAGCT
GCGGGACAGGGTGATCGAGCAGGTGGAGAAGCGCCCGGCGCTGCGCGCGG
TGGAGCGCGCGGTGTCCAAGGGCGGGTTCAAGACGGTGCTGACGTTGCGG
TTGGCACCCCTGCTGCCAATCCCCCTTGGCGCATACAACTATGTGTACGG
CGTCACATCCCTCTCCCTGGGCGAGTTCACGGCGGGCACCTTCCTGGGCT
CCATCAAGCCCTACCTCCTGGACAGCTACCTGGGCGTCTTTGGAAAGTCC
CTCGTGGACGGCGGCGGCGGCGGCGGCGGCGGCAATGACGCCGTACTACT
TGGCACCTTTGCGGTGGCAGTGCTCATAGGGACGCTCGCGTCGGAGCTCG
CGGGTCGCACGTGGGACGAGCTGTCCGCGGAGGCGAGCAGCAGCGGCGGC
GGCGACGGCGACGCCGCCGCCGCGCCGCTGCGGTGGAACGAGATGATGGG
GATCGCGCGCGACGAGCTGCCGCCGCCCGTGCGCCAGTGGGACGACAAGA
CGAGCGCCGCGGAGGGGCTCATCTGGGGGGTCGTGCAGGAGGAGTGGGAG
CGGTTACAGCGTAACCGCAGCGGCGGTGAGGAGGAGGAGGAGGAGCCGCC
ACCGCCGTGCCCCCCGCCGCTGACGGCGGCGGGCGGCGTTGACATGGGCG
TCTACATAGCTGAGAGCTGGGCGTTCAACGGGGCCTTGTTTAGAGCTTTG
GGGGAATACAGTGATCCAGCTAAAGCTCCGGAGCCGCAATGACACAGGCT
TCCTGAGTGCGATGCGGCGGCAGCCCTCTCTATGCTGCCGTGCCGGCTTG
TTGCTGGACGCTCGCTGAGCTGTTGAGCGCTGGTGACGTCGGTGTGCTCC
CTC
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protein sequence of jgi.p|Trimin1|349606

>Trimin1|349606|estExt_Genemark1.C_Ctg_460033 ID=Trimin1|349606|estExt_Genemark1.C_Ctg_460033|Name=jgi.p|Trimin1|349606|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=414bp
MAKIEDEHVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPDSTGAAAK
NAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFV
QNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVV
CATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLR
LAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKS
LVDGGGGGGGGNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEASSSGG
GDGDAAAAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWE
RLQRNRSGGEEEEEEPPPPCPPPLTAAGGVDMGVYIAESWAFNGALFRAL
GEYSDPAKAPEPQ*
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mRNA from alignment at Contig_46:179846..181750-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4575 ID=mRNA_4575|Name=jgi.p|Trimin1|349606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1905bp|location=Sequence derived from alignment at Contig_46:179846..181750- (Tribonema minus UTEX_B_3156 )
ATGGCCAAAATAGAGGATGAGCACGTCAAGATCTGGAGCAGCCGTCGCAC CATGATCAGAGGTGCCCTGTACACAGCGCGCGCAGCAGCGGCGGTGCGGG GCAAGTTCGGCGGCGACGGCAGCCCCGATAGCACCGGCGCCGCCGCCAAA AACGCCGTGCTGCTCACCGCCTTTGCGGTGGCCGCCGGCGCCGCCACCAT ACGGATAGGCGGCCGCGCCGCTCTCCTGAGCGTGCTGGGTCTAGACTTCA TGGCAGACTCTGGCATCAAAGGCAGCCTGGACGGCGGCCTCGACTTCGTG CAGAACGCGGGCGTCTACAAGTACCTGCTCTTCGCGGCGGGCTGGCTCGC CAGCAAGACGCTGTGCGCCGACTTCCTGTCCGTCATACTCGCGCTGATCA GCGGCATCCTGTTTGGGGGGGTGGTGGAGGGGGCCGCGGCGAGCGTCGTG TGCGCGACGCTGGCGTCCGTGGTGGGCTTCCAGCTGGCGCGCACGCAGCT GCGGGACAGGGTGATCGAGCAGGTGGAGAAGCGCCCGGCGCTGCGCGCGG TGGAGCGCGCGGTGTCCAAGGGCGGGTGAGCGCGTGTGTGGTGTCCCCGC GGCATCTGGTCGTTTGACAGGACAGCAGGGCCGAGCGGTGCACGCGGCCC GCTGCTGTCTGGCATGCCAATCTGCTCTTACTTCTGCGGATGGCAGGTAT CATTCAAGTTGCTGAGCAGCCGAGAGCGCTGAGATGCATGAAGCGCTTGA CGTTGATGTGGATGCGCACTCAATAGTCTGGTCGCTGAACACTGGCACTG CTCCCTGCTATCCGTTGCAGGTTCAAGACGGTGCTGACGTTGCGGTTGGC ACCCCTGCTGCCAATCCCCCTTGGCGCATACAACTATGTGTACGGTGAGT GACACTGGATGTGCGTGAATTGCTATGAAGCACGAACGCATGGTGATCAC CGGCATCTGCCCTGTCTGTGCGCTGTGAGAACTGTCTTCAGCAGGCCGGC ATCAACATGGCGCCGTCCCCACCGCATTTGAAACACCTTCCTAGTCATTA TATGTGTTGATGACGGCTGGTCCGCTTCTGCGTCTCGCCGCCTCCGCGCT GCCGTTGACATGAAGGCTTACCACGCGCAACAACAAAGTTCCAACAGCTC CAATGCGTGCTCATCTTCTGCTCAAATTCCTATGCATGCTATTCTCGCCA GGCGTCACATCCCTCTCCCTGGGCGAGTTCACGGCGGGCACCTTCCTGGG CTCCATCAAGCCCTACCTCCTGGACAGCTACCTGGGCGTCTTTGGAAAGT CCCTCGTGGACGGCGGCGGCGGCGGCGGCGGCGGCAATGACGCCGTACTA CTTGGCACCTTTGCGGTGGCAGTGCTCATAGGGACGCTCGCGTCGGAGCT CGCGGGTCGCACGTGGGACGAGCTGTCCGCGGAGGCGAGCAGCAGCGGCG GCGGCGACGGCGACGCCGCCGCCGCGCCGCTGCGGTGGAACGAGATGATG GGGATCGCGCGCGACGAGCTGCCGCCGCCCGTGCGCCAGTGGGACGACAA GACGAGCGCCGCGGAGGGGCTCATCTGGGGGGTCGTGCAGGAGGAGTGGG AGCGGTTACAGCGTAACCGCAGCGGCGGTGAGGAGGAGGAGGAGGAGCCG CCACCGCCGTGCCCCCCGCCGCTGACGGCGGCGGGCGGCGTTGACATGGG CGTCTACATAGCTGAGAGCTGGGCGTTCAACGGGGCCTTGTTTAGAGCTT TGGGGGAATACAGTGATCCAGCTAAAGCTCCGGAGCCGCAATGACACAGG CTTCCTGAGTGCGATGCGGCGGCAGCCCTCTCTATGCTGCCGTGCCGGCT TGTTGCTGGACGCTCGCTGAGCTGTTGAGCGCTGGTGACGTCGGTGTGCT CCCTC
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Coding sequence (CDS) from alignment at Contig_46:179846..181750-

>mRNA_4575 ID=mRNA_4575|Name=jgi.p|Trimin1|349606|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1242bp|location=Sequence derived from alignment at Contig_46:179846..181750- (Tribonema minus UTEX_B_3156 )
ATGGCCAAAATAGAGGATGAGCACGTCAAGATCTGGAGCAGCCGTCGCAC
CATGATCAGAGGTGCCCTGTACACAGCGCGCGCAGCAGCGGCGGTGCGGG
GCAAGTTCGGCGGCGACGGCAGCCCCGATAGCACCGGCGCCGCCGCCAAA
AACGCCGTGCTGCTCACCGCCTTTGCGGTGGCCGCCGGCGCCGCCACCAT
ACGGATAGGCGGCCGCGCCGCTCTCCTGAGCGTGCTGGGTCTAGACTTCA
TGGCAGACTCTGGCATCAAAGGCAGCCTGGACGGCGGCCTCGACTTCGTG
CAGAACGCGGGCGTCTACAAGTACCTGCTCTTCGCGGCGGGCTGGCTCGC
CAGCAAGACGCTGTGCGCCGACTTCCTGTCCGTCATACTCGCGCTGATCA
GCGGCATCCTGTTTGGGGGGGTGGTGGAGGGGGCCGCGGCGAGCGTCGTG
TGCGCGACGCTGGCGTCCGTGGTGGGCTTCCAGCTGGCGCGCACGCAGCT
GCGGGACAGGGTGATCGAGCAGGTGGAGAAGCGCCCGGCGCTGCGCGCGG
TGGAGCGCGCGGTGTCCAAGGGCGGGTTCAAGACGGTGCTGACGTTGCGG
TTGGCACCCCTGCTGCCAATCCCCCTTGGCGCATACAACTATGTGTACGG
CGTCACATCCCTCTCCCTGGGCGAGTTCACGGCGGGCACCTTCCTGGGCT
CCATCAAGCCCTACCTCCTGGACAGCTACCTGGGCGTCTTTGGAAAGTCC
CTCGTGGACGGCGGCGGCGGCGGCGGCGGCGGCAATGACGCCGTACTACT
TGGCACCTTTGCGGTGGCAGTGCTCATAGGGACGCTCGCGTCGGAGCTCG
CGGGTCGCACGTGGGACGAGCTGTCCGCGGAGGCGAGCAGCAGCGGCGGC
GGCGACGGCGACGCCGCCGCCGCGCCGCTGCGGTGGAACGAGATGATGGG
GATCGCGCGCGACGAGCTGCCGCCGCCCGTGCGCCAGTGGGACGACAAGA
CGAGCGCCGCGGAGGGGCTCATCTGGGGGGTCGTGCAGGAGGAGTGGGAG
CGGTTACAGCGTAACCGCAGCGGCGGTGAGGAGGAGGAGGAGGAGCCGCC
ACCGCCGTGCCCCCCGCCGCTGACGGCGGCGGGCGGCGTTGACATGGGCG
TCTACATAGCTGAGAGCTGGGCGTTCAACGGGGCCTTGTTTAGAGCTTTG
GGGGAATACAGTGATCCAGCTAAAGCTCCGGAGCCGCAATGA
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