mRNA_4307 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144546
Unique NamemRNA_4307
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A836CPH6_9STRA (Resolvase, holliday junction-type, YqgF-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPH6_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.500e-99
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 
Query:    1 MLRHVQRCSCLDPTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKREND 432
            MLRHVQRCSCLDPTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKREND
Sbjct:    1 MLRHVQRCSCLDPTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKREND 144
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A7S4D9E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9E5_HETAK)

HSP 1 Score: 73.6 bits (179), Expect = 2.290e-13
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1 
Query:   34 DPTRAA-LMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKREND 432
            D +R+  ++  D++ T IG+A +D T +F  PL + +      R      +  KL  ++ E    G V+GWP   DGS G +C  VL+ L  +H    ++ P++LWDER T+VDAR  +       +R+K+  D
Sbjct:   30 DQSRSTCVLGLDIAETNIGVAFSDATYSFASPLKKLQRMRPTYRQDSMQNISSKLQKVIAEQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMED 163
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A2E7K062_9RICK (Putative pre-16S rRNA nuclease n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7K062_9RICK)

HSP 1 Score: 70.9 bits (172), Expect = 9.800e-13
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 1 
Query:   37 PTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKR 423
            P +  L+A D+ S  IG+A++D  R     L     H + RR     +  D L   ++EH I G+VMG+P  +DGS G RC +    +R +     L  P LLWDER ++  A  E A L A   R KR
Sbjct:   14 PPKGRLLALDLGSKTIGLALSDELRGIANAL-----HTIKRRKFSQDI--DALQQAVKEHAIAGLVMGYPLNMDGSEGPRCQSTRQFVRNMEEHISL--PTLLWDERLSSYAA--EEAMLSADLSREKR 131
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A3M2EJP1_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2EJP1_9PROT)

HSP 1 Score: 70.9 bits (172), Expect = 1.550e-12
Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 1 
Query:   31 LDPTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKR 423
            L P  A L+  D  + +IG+AV+D  R+   PLT  +      R L P   +  ++ L    G    V+G P+ +DGS G RC +V S  R+L   +P   P+LLWDER +TV A   + A  A A R +R
Sbjct:   15 LLPEGAPLIGLDHGTRMIGVAVSDSRRSIASPLTTLRRS----RRLTPD--LQAIEALAAARGAAAFVLGLPRNMDGSEGARCDSVRSFARSLARVSPR--PILLWDERLSTVAAHAVLDATDARADRRRR 137
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A318SV05_9RHOB (Putative pre-16S rRNA nuclease n=1 Tax=Pseudoroseicyclus aestuarii TaxID=1795041 RepID=A0A318SV05_9RHOB)

HSP 1 Score: 68.6 bits (166), Expect = 8.240e-12
Identity = 48/126 (38.10%), Postives = 64/126 (50.79%), Query Frame = 1 
Query:   43 RAALMAWDVSSTVIGIAVTDRTRAFVRPLT--RTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARR 414
            R AL A D+ +  IG+AV+D  R    PLT  R K  GVD + L  A         +      G+V+G P+ +DGS G R  +  +  R L A  PL  P++LWDER +TV A   +    AS RR
Sbjct:   15 RGALAALDLGTKTIGLAVSDGMRHVATPLTTIRRKKFGVDAQALLAA---------LESRAPVGLVLGLPRNMDGSEGPRAQSTRAFARNLSALTPL--PMMLWDERLSTVAAERALIEADASRRR 129
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A845AA09_9SPHN (Putative pre-16S rRNA nuclease n=1 Tax=Qipengyuania algicida TaxID=1836209 RepID=A0A845AA09_9SPHN)

HSP 1 Score: 68.2 bits (165), Expect = 1.280e-11
Identity = 54/132 (40.91%), Postives = 67/132 (50.76%), Query Frame = 1 
Query:   37 PTRAALMAWDVSSTVIGIAVTDRTRAFVRP---LTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKR 423
            P   AL+A DV +  IGIA  D    F      L R K  G DR          KL  L+R  GI G+V+G P+ +DGS G R  A  S   A + A  L+ PVLLWDER++T+ A  E A +G    R KR
Sbjct:   19 PDGGALLALDVGTKTIGIATCDAGWRFATAGTTLPRGKF-GADRA---------KLGELVRARGITGLVIGLPRNMDGSEGPRAQA--SRAYARNCAEALKLPVLLWDERWSTLSA--ESAMIGQDMSRAKR 136
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: UPI001664D4FC (Holliday junction resolvase RuvX n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI001664D4FC)

HSP 1 Score: 67.0 bits (162), Expect = 4.230e-11
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 1 
Query:   10 HVQRCSCLD-PTRAALMAWDVSSTVIGIAVTDRTRAFVRPLT---RTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRA-PVLLWDERFTTV 369
            HV     LD P +A L+  D+ +  IG+A++D TR    PL    RTK           A L+D    L  +HG+ G+V+GWP  +DGS G R  A  + +R L   A L A P+ LWDER +TV
Sbjct:   10 HVPLADLLDLPGKARLLGLDLGTKTIGLALSDVTRRVASPLETIRRTKFSA------DAARLLD----LAEQHGVGGLVIGWPLNMDGSEGPRTQATGAFVRNL---AKLTAVPMALWDERLSTV 121
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A1G3KJW0_9SPHN (Putative pre-16S rRNA nuclease n=20 Tax=Sphingomonadales TaxID=204457 RepID=A0A1G3KJW0_9SPHN)

HSP 1 Score: 66.2 bits (160), Expect = 5.950e-11
Identity = 46/132 (34.85%), Postives = 64/132 (48.48%), Query Frame = 1 
Query:   37 PTRAALMAWDVSSTVIGIAVTDRTRAFVRP---LTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKR 423
            P    LM  DV +  IG+A  D   +F  P   + R K              ++ L  L+ +HGI G+V+G P  +DGS   R  +  +  R L   APL  P+LLWDER++T  A +E A + A   R KR
Sbjct:   14 PAGGRLMGLDVGTKTIGVAFCDTNWSFATPDKTIIRNKFSAD----------LETLKALVAQHGIVGIVVGLPLNMDGSDSPRTQSTRAFARNL---APLALPLLLWDERWST--AAVERAMIAADVSRAKR 130
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A849L4F2_9RHOB (Putative pre-16S rRNA nuclease n=1 Tax=Halovulum dunhuangense TaxID=1505036 RepID=A0A849L4F2_9RHOB)

HSP 1 Score: 66.2 bits (160), Expect = 6.860e-11
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 1 
Query:   37 PTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARR 414
            P  A ++  D+    IG+A++DR      PL   +     RR          L+ +M E G  G+V+G P  +DGS G R  +  +  R L A  P+  PV+LWDER TTV A   +    AS RR
Sbjct:   14 PRDAPILGLDLGEKTIGVAISDRRLGIATPLLTIR-----RRKFTQDATA--LEAIMAERGAAGLVLGLPLNMDGSEGPRAQSTRAFARNLMARRPV--PVILWDERLTTVAAERALLEADASRRR 130
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BLAST of jgi.p|Trimin1|144546 vs. uniprot
Match: A0A2E6QIU7_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QIU7_9PROT)

HSP 1 Score: 66.2 bits (160), Expect = 6.860e-11
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1 
Query:   49 ALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHGVDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTLRALHAAAPLRAPVLLWDERFTT 366
            +L+  D     +G+A++DR R    PL      G+ R     + ++  L+ L+ EHG+ G+V+G P  ++G+ G RC +V    R +    PL  PVLLWDER +T
Sbjct:   19 SLLGVDTGEKTVGLALSDRLRVIASPLI-----GLRRSKF--SAMLSALEALIAEHGVVGMVVGLPVNMNGTEGPRCQSVRQFARNVEG--PLGLPVLLWDERLST 115
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144546 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPH6_9STRA2.500e-99100.00Resolvase, holliday junction-type, YqgF-like prote... [more]
A0A7S4D9E5_HETAK2.290e-1332.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2E7K062_9RICK9.800e-1336.43Putative pre-16S rRNA nuclease n=1 Tax=Rickettsial... [more]
A0A3M2EJP1_9PROT1.550e-1236.64Putative pre-16S rRNA nuclease n=1 Tax=Alphaproteo... [more]
A0A318SV05_9RHOB8.240e-1238.10Putative pre-16S rRNA nuclease n=1 Tax=Pseudorosei... [more]
A0A845AA09_9SPHN1.280e-1140.91Putative pre-16S rRNA nuclease n=1 Tax=Qipengyuani... [more]
UPI001664D4FC4.230e-1139.20Holliday junction resolvase RuvX n=1 Tax=Chelatoco... [more]
A0A1G3KJW0_9SPHN5.950e-1134.85Putative pre-16S rRNA nuclease n=20 Tax=Sphingomon... [more]
A0A849L4F2_9RHOB6.860e-1134.92Putative pre-16S rRNA nuclease n=1 Tax=Halovulum d... [more]
A0A2E6QIU7_9PROT6.860e-1134.91Putative pre-16S rRNA nuclease n=1 Tax=Rhodospiril... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:891846..894757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144546|gw1.10.148.1
BRITEko00000,ko01000
KEGG koko:K07447
GOsGO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
Preferred nameruvX
DescriptionCould be a nuclease involved in processing of the 5'-end of pre-16S rRNA
COG categoryL
Max annot lvl28211|Alphaproteobacteria
EggNOG OGsCOG0816@1|root,COG0816@2|Bacteria,1RDHZ@1224|Proteobacteria,2U98Y@28211|Alphaproteobacteria
Evalue2.78e-12
Seed ortholog266809.PM03_04205
Hectar predicted targeting categoryother localisation
TranscriptId144868
TrackFilteredModels1
ProteinId144546
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144546gene_4307Tribonema minus UTEX_B_3156 geneContig_10 891846..894757 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4307_1exon_4307_1Tribonema minus UTEX_B_3156 exonContig_10 891846..892094 +
exon_4307_2exon_4307_2Tribonema minus UTEX_B_3156 exonContig_10 894575..894757 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4307CDS_4307Tribonema minus UTEX_B_3156 CDSContig_10 891846..892094 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144546Trimin1|144546|gw1.10.148.1Tribonema minus UTEX_B_3156 polypeptideContig_10 891846..894757 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4307 ID=mRNA_4307|Name=jgi.p|Trimin1|144546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=432bp|location=Sequence derived from alignment at Contig_10:891846..894757+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCCGGCACGTGCAGCGCTGCAGTTGCCTGGACCCCACCAGAGCAGC
GCTAATGGCCTGGGACGTCAGCAGCACAGTGATAGGCATCGCGGTCACCG
ACAGGACCAGGGCGTTCGTCCGGCCTCTGACGAGGACAAAGCTGCACGGC
GTGGACAGGAGGCCGCTGCCGCCTGCGGTGCTGATGGACAAGCTGGACGG
ACTGATGAGGGAGCACGGCATATGTGGGGTTGTGATGGGGTGGCCCCAGG
AGCTCGACGGCAGCGCAGGCCGCCGCTGCCACGCCGTGCTCTCCACGCTG
CGCGCGCTGCACGCCGCCGCGCCGCTGCGCGCGCCCGTGCTGCTGTGGGA
CGAGCGCTTCACGACGGTGGACGCGCGCTTGGAGATGGCAGCGCTCGGCG
CCAGCGCGCGCCGCGTCAAACGCGAGAACGAC
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protein sequence of jgi.p|Trimin1|144546

>Trimin1|144546|gw1.10.148.1 ID=Trimin1|144546|gw1.10.148.1|Name=jgi.p|Trimin1|144546|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=144bp
MLRHVQRCSCLDPTRAALMAWDVSSTVIGIAVTDRTRAFVRPLTRTKLHG
VDRRPLPPAVLMDKLDGLMREHGICGVVMGWPQELDGSAGRRCHAVLSTL
RALHAAAPLRAPVLLWDERFTTVDARLEMAALGASARRVKREND
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mRNA from alignment at Contig_10:891846..894757+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4307 ID=mRNA_4307|Name=jgi.p|Trimin1|144546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2912bp|location=Sequence derived from alignment at Contig_10:891846..894757+ (Tribonema minus UTEX_B_3156 )
ATGCTCCGGCACGTGCAGCGCTGCAGTTGCCTGGACCCCACCAGAGCAGC
GCTAATGGCCTGGGACGTCAGCAGCACAGTGATAGGCATCGCGGTCACCG
ACAGGACCAGGGCGTTCGTCCGGCCTCTGACGAGGACAAAGCTGCACGGC
GTGGACAGGAGGCCGCTGCCGCCTGCGGTGCTGATGGACAAGCTGGACGG
ACTGATGAGGGAGCACGGCATATGTGGGGTTGTGATGGGGTGGCCCCAGG
TCAGTTGACGAGGCTCATTGTTTCACAAATCTTGTTAGTTGACGAGGCTA
ACTGGTACTGTTTCACAAACCTTTTCAGCCCATTATGAGTCACAGGAGAC
AGGCTATGCGTGACACCTGCGTACCAGTGCAGCCGTACCTGATGCGCTGG
ACGCGGTCATGAACGCCCGCGGTAGTCGCGTGACGAAGCTCACTCAAACT
ACTGCTTCTTACCACATGGTGAAAGCTTGCTACGTCGGGCTCGTTCTGTG
CAGAATGACACAGTGCTCTGTCAAGCTGTGCACTGCAGCGCATGCGCATG
CGAGCACCACACAGGAATGGCGGGCAGCAGACGCCACCGTCACTAGTGGT
AGCAGCAGTGGCAGTGAGGAACACGGCTAGGGCTAGGGTTGATATGTGCT
GATTGCGCAGTGCCGCCCTCGTGTGCATGCCTGCATCCTCACTTCAAATG
TGCGCACAACGCACACCACCACCCGCGCGGTGCATCGTCCATATTGCCAG
CCCCACCACTTTGAAACTGACTGTATCTGGGCATAAGCAGGGTTCGGGTA
AACCCTCGGCTAACCATTATTGTAGGGTTTGAGGTCGTTGCCGGAATTTC
AAATCAGCGCACCGGCGCGTGCTCATCGCAGCAACGCAACGTTCGTCTGC
GCGCTAGGAAGTCGATGGATGGCTGCCGTAGCCACGCCGCCGCCGCGGCA
CTCAGCCCACGCCTCGCTACTGTGCTGCTCTGGAGTAGCAGACACTCTAT
TACCGTATTATCTATAATTAAGCCCATGGGGCGAGTTTTTTATGAGAGCG
AAAAAAGGGGGGTGGGGCGCCATTAATATATGGAGATAAGAAGGGTGGGG
TGCATTAAATGAATGTTTGAGCCATTTTAGCTCATCTATTACCATCATGA
GGTGCCAGCACGCTTCTACGCCGCTCCTGAAACCGGTTCAACTTCTTGAA
AGTCTGCTGCTGCTGCTGGAAGCCTTTTTTTGAGTTTGGCTACATTGTTG
GCTGTCTTTCTGTTTTAGACGCTCTGCACGTTGCTGACAGTGCATGCATG
CGCACACGCAATGTGATGATGTAGCATGAGTCACTGAGTGCGCAGAGTAC
ATGTACGCAGATAATACATGCTGCGTATGCATGTGAGAAAAGGGGGGGGG
GGGCACATTTTCATGAGCGAAAAATAAGGGTGGGGCGTCATTTTGTGAGG
GCTCGGAAATTCATAAAAAAACTCGCCCCATGGGCTTAATTATAGATAAT
ACGGTACAAGTGTTTGTCTGCGACAAACTTCGACAAACTTCGTCATCGAC
AAATTTGCATTGATGATGATGTGTGGTACATTTTCGGTCTCGAACCTCAT
CTCGTCGCATTCTTCGGTGCCAGGCGCATGCGCGCAGGAGCGCGCTGCGC
CCCAGCCCACGCCGCTTGAGAATTCAATGAAAACTCATCATCGGACTTTC
ATGACTGCTGAGCGCTGCGTCGCCACGGTACGCGCCCTCTCCGCGCGCGA
GCGCGCAGCAGCAGCGCCGGCCGCGGGTGCCCCGCCATCCTATCGATGCT
GCGCGCGCTGCCCTGCGCTGCTACCCACTCCATCACGCCAAGAACTCAAT
GGATGCTCAGTGTTTAACGTTGCTCTTGCAGGCTCTCGCTGCGCTGCGCG
CCGCCATCCGACCACGCTGGGAGTTCGATTAGAGTGCTGAGTGCTGCCGC
GCGCGCACAAGCCGTTGCAGAGGGGGGCGCCCATCGCGGCCTTTGGATGC
GTCAAGCAAATGGCCTGGCCCACGCCGCGTGAGAACTCGATGCATTACAC
ATAACTTCAATTAGCGCTGAGCGTTGCGATATGCTGAGGGCGGACTCTTG
GCGCCGCGCAGAGCCCGACACCGAGCCCGTGCCGCATGAGAACTCGATGA
ATCACACAGAACTTGAATGATCGCTGAAGCGCTGTGATACGCGCCCCGCC
GCGCCGAGCGCTGCCGCAAGCACTCGCTGCACTTCAACATGAGAATTTGA
TGAACTAAGTACACAGGAGACTTGCATGATCGCTGAGCGTGGCGCCGCCG
CTATGTACACCCGCCCGCGCAGGAGCTCGGCGGCAGCGCCGGCCGCCGCT
CCCACGCCGTCCTTTCCACGCTGCACGCCGCCGCAAGCTGCTCCTGTGCG
CTAGGATTTCAATCGATGCTCAGCGTTCAGCGTTGCTCACGCGGGCTCCT
CTCGCTGCTGTGTTGCTCACGCGGGCTCCTCTCGCTGCGCTCCGCCATCT
GCTCACACTGCGCCCACCATCTGGCCCACGCCATGACAATGCGATGAACG
ACATAGAACAATCATGGTCGCTGAGCGCTGCATCGCCGCGATAGCACGCA
CCCTTCCCCGCGCGCAGGAGCTTACACCTGGCCCGCGCCGCGCGCAAACA
TGGCGAATTACACACAGTGTAGCTTTAAACTTGATCGCTGAGCATTGCTA
TACCCGCCCCTCTCTGCGCGCGCGCGCAGGAGCTCGACGGCAGCGCAGGC
CGCCGCTGCCACGCCGTGCTCTCCACGCTGCGCGCGCTGCACGCCGCCGC
GCCGCTGCGCGCGCCCGTGCTGCTGTGGGACGAGCGCTTCACGACGGTGG
ACGCGCGCTTGGAGATGGCAGCGCTCGGCGCCAGCGCGCGCCGCGTCAAA
CGCGAGAACGAC
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Coding sequence (CDS) from alignment at Contig_10:891846..894757+

>mRNA_4307 ID=mRNA_4307|Name=jgi.p|Trimin1|144546|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=432bp|location=Sequence derived from alignment at Contig_10:891846..894757+ (Tribonema minus UTEX_B_3156 )
ATGCTCCGGCACGTGCAGCGCTGCAGTTGCCTGGACCCCACCAGAGCAGC
GCTAATGGCCTGGGACGTCAGCAGCACAGTGATAGGCATCGCGGTCACCG
ACAGGACCAGGGCGTTCGTCCGGCCTCTGACGAGGACAAAGCTGCACGGC
GTGGACAGGAGGCCGCTGCCGCCTGCGGTGCTGATGGACAAGCTGGACGG
ACTGATGAGGGAGCACGGCATATGTGGGGTTGTGATGGGGTGGCCCCAGG
AGCTCGACGGCAGCGCAGGCCGCCGCTGCCACGCCGTGCTCTCCACGCTG
CGCGCGCTGCACGCCGCCGCGCCGCTGCGCGCGCCCGTGCTGCTGTGGGA
CGAGCGCTTCACGACGGTGGACGCGCGCTTGGAGATGGCAGCGCTCGGCG
CCAGCGCGCGCCGCGTCAAACGCGAGAACGAC
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