mRNA_4161 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A836CHI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI1_9STRA) HSP 1 Score: 727 bits (1876), Expect = 2.140e-256 Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 2 Query: 17 MERSFSASRDDTAFAPRGTRQPPIKNNGCSPLKKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVMELTPPSYSQRSDAXXXXXXXXXXXXXXAYGGEESQCSLTARYDGLALASQQSVGSQYGDQXXXXXXXXXXXXXXXXSDYGGAAFAAVSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPAPKRKRARLTPEEREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERAVATGRHVAQEVACVLDAGWLDAMAEPDRAALTEAAARQGDDKEAFKVLQARGAVRGAIWWTRRGLLDGGAAAEGDGVSIMQELRVVAVDPAEFADALAVPGAPPDTYPGVGALVDAVAARLCGXXXXXXXXXXXXXXXGVARELHXXXXXXXXXXXXXXXXXXXXXXACPGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAKVTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFTDPAQPQPAALLAHVMSERRELVLSERVYRFFTTRDPDMVVM 1858 MERSFSASRDDTAFAPRGTRQPPIKNNGCSPLKKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVMELTPPSYSQRSDAXXXXXXXXXXXXXXAYGGEESQCSLTARYDGLALASQQSVGSQYGDQXXXXXXXXXXXXXXXXSDYGGAAFAAVSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPAPKRKRARLTPEEREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERAVATGRHVAQEVACVLDAGWLDAMAEPDRAALTEAAARQGDDKEAFKVLQARGAVRGAIWWTRRGLLDGGAAAEGDGVSIMQELRVVAVDPAEFADALAVPGAPPDTYPGVGALVDAVAARLCGXXXXXXXXXXXXXXXGVARELHXXXXXXXXXXXXXXXXXXXXXXACPGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAKVTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFTDPAQPQPAALLAHVMSERRELVLSERVYRFFTTRDPDMVVM Sbjct: 1 MERSFSASRDDTAFAPRGTRQPPIKNNGCSPLKKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVMELTPPSYSQRSDAXXXXXXXXXXXXXXAYGGEESQCSLTARYDGLALASQQSVGSQYGDQXXXXXXXXXXXXXXXXSDYGGAAFAAVSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPAPKRKRARLTPEEREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERAVATGRHVAQEVACVLDAGWLDAMAEPDRAALTEAAARQGDDKEAFKVLQARGAVRGAIWWTRRGLLDGGAAAEGDGVSIMQELRVVAVDPAEFADALAVPGAPPDTYPGVGALVDAVAARLCGXXXXXXXXXXXXXXXGVARELHXXXXXXXXXXXXXXXXXXXXXXACPGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAKVTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFTDPAQPQPAALLAHVMSERRELVLSERVYRFFTTRDPDMVVM 614
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: D7FI47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI47_ECTSI) HSP 1 Score: 141 bits (355), Expect = 2.010e-31 Identity = 112/342 (32.75%), Postives = 150/342 (43.86%), Query Frame = 2 Query: 881 ATGRHVAQEVACVLDAGWLDAMAEPDRAALTEAAARQGDDKEAFKVLQARGAVRGAIWWTRRGLLDGGAAAEGDGVSIMQELRVVAVDPAEFADALAVPGA------------PPDTYPGVGALVDAVAARLCGXXXXXXXXXXXXXXXGVARELHXXXXXXXXXXXXXXXXXXXXXXACPGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAKVTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFTDPAQPQP--AALLAHVM---SERRELVLSERVYRFFTTRDPDMVV 1855 A G +EVACV++ + D+ A AA Q KE F V GA+WWTRR LDGGAA G GV + ++ VV V P D L PGA D + G+G VD + + G A+ C +D +D WL++ + VE R+T+ ETGQYLWDLT++L+ PY+ +T+LHCV+R+K G D W+R L QV VS KA I YP R LV A +DP+ P+ A LL M SE+R+ + RV+ FT D D V+ Sbjct: 453 ARGNFRDEEVACVMERHFFDSARN---ARARAGAAEQQGHKEKFMVAPGDCGAAGAVWWTRRAHLDGGAAVSGPGVQTL-DILVVVVPPETLLDRLGRPGAGGRGXXXXXXXXXSDLFRGLGQFVDGIRSSAAGFSRLVLVLEG-------AKAAIDKRWAASAHSSSSSGNGKGPAGRCARDDEFEDAQCWLLIHKEVETRLTKNSEETGQYLWDLTKSLSSMPYKDDVTELHCVARSKTEARGSERFPEKEK----ELMDTWVRMLEQVQHVSGNKAVEIAAHYPLPRDLVAALSDPSVPEGDRAGLLQRKMGSSSEQRKC--ARRVFELFTQEDGDFVI 777
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7S0XJS5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XJS5_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.170e-8 Identity = 50/172 (29.07%), Postives = 81/172 (47.09%), Query Frame = 2 Query: 1385 PGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAKVTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFT------------DPAQPQPAALLAHVMSE--RRELVLSERVYRFFTTRDPDMVVM 1858 P LQD + W++V VE+ + ++ + R LA PY T+L C+ + K A D+ A DVWLRQL Q+PG+SE +A++IV +P+ + L A+ A + ++LL S +R LS+ +YR T+ DP +++ Sbjct: 67 PTVKELQDAMQWVLVQFQVESILCPNDEFLQSTVFKMARGLAEKPYIKQATELECIKKIKQGCA-------DSNNPLEKATDVWLRQLQQLPGLSETRAQHIVEHFPTIQSLWQAYQWEHHRXXXXXXXXDADERCSSLLEDKFSAGGKRYKKLSDSLYRVITSNDPHEMIL 231
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A1E7FB83_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB83_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.250e-6 Identity = 51/175 (29.14%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 1385 PGEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTDLHCVSRAK--VTVAGGALCGADNAGGGATAADVWLRQLMQVPGVSEPKARNIVRAYPSARRLVHAFT-------------DPAQPQPAALLAHVMS--ERRELVLSERVYRFFTTRDPDMVVM 1858 P L+D + WL+V VE + + + +TR+LA Y +T+L C+ + K T L A DVW+RQL Q+PG+SE +A++ V YP+ + L A+ + A +ALL S R LS+ VYR T+ DP+ +++ Sbjct: 366 PTVKELEDAMQWLLVQFQVECILCSSIELMQLTIHKMTRSLAEKRYTNQVTELECIKKIKQGCTALDSKL---------EKAKDVWIRQLQQLPGMSESRAQHAVFHYPTCQSLWQAYQREHYQQQHDNDNKNDADSSCSALLEDKFSGDNTRYRKLSDSVYRVMTSNDPNEMIL 531
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7R9UC98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC98_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 3.850e-5 Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 2 Query: 1388 GEDALQDCLAWLMVARGVEARVTRTPAETGQYLWDLTRALAHGPYRAALTD---LHCVSRAKVTVAGGALCGADNA---GGGATAADVWLRQLMQVPGVSEPKARNIVRAYP 1705 G + ++ LAW+ G+ A+ E +YL D A+A Y +LTD L + + KV+ C + G A + ++R LM +P VSEPKA+ IV+ YP Sbjct: 36 GPEDVRHALAWMYARLGIAAQTFEAEQEVAEYLVDTASAVAKARYDPSLTDRYDLRTLPKLKVS------CNISHEFPEGAAEDAINTFMRMLMMIPNVSEPKAQAIVQKYP 141
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA) HSP 1 Score: 957 bits (2473), Expect = 0.000e+0 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 Query: 55 MMVAEESSSAGMVDVQQYLLTAEADPKEEWRVLHRGLVATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNAGLQEPVASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQVYISADVLKDWTKSQ 1638 MMVAEESSSAGMVDVQQYLLTAEADPKEEWRVLHRGLVATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNAGLQEPVASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQVYISADVLKDWTKSQ Sbjct: 1 MMVAEESSSAGMVDVQQYLLTAEADPKEEWRVLHRGLVATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNAGLQEPVASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQVYISADVLKDWTKSQ 528
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: L1IRC9_GUITC (PRORP domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IRC9_GUITC) HSP 1 Score: 146 bits (368), Expect = 1.980e-36 Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 967 DTLLNFAQWLRERAK-FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFA---RLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYF-----PRVALEGSTESLEVDLFDPPPFTRDIQ 1593 +++LNF W+RE ++ F+ VVD PNVAY QNF GCF Q+D VV KL GE+VLV+ P +Y++ IIPN R + V++ + II W +G C P + NDDWYWM TV + V VV+ND MRDHRLALL+P PF+RWK T+ +R+ F P G+++ +V L PP + +IQ Sbjct: 12 ESILNFLDWMRETSQQFSVVVDGPNVAYSKQNFETGCFSYHQIDIVVNKLREEGEKVLVLLPYKYVQPIIPNHARHQGHLNFSTAQHVVTGDEMEIIDRWNAEG------------CLKISP-------HGSNDDWYWMLSTVIDEGET--VRVVTNDQMRDHRLALLDPRPFLRWKTTRIIRFDFSHAWEPEKIANGTSDIPQVTLIQPPVISPEIQ 208
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI) HSP 1 Score: 154 bits (388), Expect = 7.090e-36 Identity = 124/413 (30.02%), Postives = 181/413 (43.83%), Query Frame = 1 Query: 565 DLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNA------------------------GLQE------PVASMVSVESGGK---------------------GSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAK-----ASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLR-ERAK---FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQ--QMRYYFPRVALEGS--------TESLEVDLFDPPPFTRDIQ 1593 + YV L G S++G+LW +G++D L E+SY L +EQL++ FNA + E P+A V V G + SCPAC L+A+GLT ER ++R L +A + + ++ A S + L F WL +RA +TAV+D+ NVAYH + F + QVD +VQ LEA+GER LV+ E+Y+ + R + +P AI++ W K LY C++ +DDWYWMY TVAFD++ P+TV+SND RDHR++L E P++RW+ TQ Q +P + G +V + PP FTRD+Q Sbjct: 382 EQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPLAATPSIPINGDAGAVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPHSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRHTKMLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGS--AFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRAKSQLYE-------------------CSDEASDDWYWMYATVAFDDI--PMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYPLKDIMGKGLNPQGWPANPPQVAIQPPPAFTRDVQ 771
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7S0LY20_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY20_9CRYP) HSP 1 Score: 121 bits (303), Expect = 8.880e-29 Identity = 73/161 (45.34%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 1012 FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRF----ARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRW 1482 FT +VD PNVAY QNF GG F Q+D V+ L A GERVL+V P +Y + ++PN R+ A Q + +S + A++ W +GIL V T G NDDWYWM +V DNV A VVSND MRDHRLALLEP P +RW Sbjct: 10 FTVIVDGPNVAYARQNFVGGGFSYHQIDLVIAGLRAEGERVLLVLPHKYTQTVVPNHARYTGSGACAQHE---VSVEERALLDKWTAEGIL--------------VVTPIGA-----NDDWYWMLGSVCRDNVQA--RVVSNDQMRDHRLALLEPRPVLRW 146
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7R9U7R6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R6_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.170e-27 Identity = 93/305 (30.49%), Postives = 141/305 (46.23%), Query Frame = 1 Query: 718 NAGLQEPVASMVS-----VESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAK----FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTV--LSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAF--DNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQ 1593 N L+ PVA V+ +G CPACT + L+ ++R +R A+ +A P+N + AS F++WLR +A+ F ++D N+AY QN+ G F + Q+ V LE G +VLV+ P++Y +++PN R RK + L ++++W+E LY V T +DD+ WM TVA D + VVSNDLMR+HR LL F+RW+ TQ + + +E EV +F+PPPF+R+IQ Sbjct: 3 NQNLESPVAPSPRYTGQVVDFSSEGKCPACTREASQVSLSTKDRAALRSAILKLAAASGPSNLQSVAS-------------------------FSRWLRRKAREGHHFDYILDGANIAYTKQNYAEGRFSVVQIALVKHHLEQLGAKVLVLLPQKYCGSVVPNHIRRKGKDRKFEMVELDEDEQQLLQAWQETNQLYS------------VETGV-------HDDYLWMLATVANEQDRMQNLTRVVSNDLMRNHRKWLLNSRDFLRWRFTQVVHFELSH-GIEEYAPLPEVVIFEPPPFSREIQ 262
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A0G4EL33_VITBC (Ribonuclease P n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EL33_VITBC) HSP 1 Score: 111 bits (277), Expect = 5.280e-22 Identity = 130/526 (24.71%), Postives = 203/526 (38.59%), Query Frame = 1 Query: 241 VPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLR-----GASLSGD-LWSMVATGEVDALLAELSYEVFELDGDLIEQL------QQAFNAGLQEP----VASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYL--RAIIPNSTR-----FAR-LQRKRTV----LSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFD----------NVAA---------------------------------PVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESL----EVDLFDPPPFTRDIQ 1593 V R Y ++N+C + L ++ M A E Y L+R A + QG D+ + + HMK Q + + + LR G SGD LW ++ L+ E S + D + +L + A + G QEP A +VS+E G CPAC L+ + L RE ++R A+ +A P L F ++L R FT ++DAPN+AY QN G F Q++ V ++L RGER L+V P Y R +PN ++ AR + +RTV L+P+ +++ WE++G L+ C++ +DD+YW+ T+ D N+ A PV +V+NDL+RDH L +LEP F RW+ + + + F R +SL + + PP F+R+ Q Sbjct: 235 VNRDCYTVLLNVCALDHDITRTLTVYSKMVNANLDLTEPDYVALIRAYAKNSQLKEAFQIALSM--------------IQQG-----DLDGIFDLLQHMKHQALFPAHEEILLTLRTLKDHGLLFSGDALWQERVNFLMNLLIEETSDLHVRVAEDFVRELAPTAPREGATSTGGQEPPPRAAARIVSIED---GWCPACGERLETVRLDSREGRRLRLAVLKLAALSHPKEVCG-------------------------LEIFRRFLMSRGPFTMILDAPNIAYQRQNTNRGHFSYLQIEMVKEELVRRGERPLIVLPRHYYWDRVKVPNCSKGTIRTLAREVYSERTVNWDVLAPEDKELVKKWEDEGCLF---------VCNFKA----------HDDYYWILATLMEDTTLLHESVPNNMKAQFLRRLDDYRASRGEGGGAGGETAVSTIGRNHPPVYIVTNDLLRDHHLTMLEPRAFRRWRSSTLINFDFERPISHLDPQSLSRRPDFHVQWPPTFSREPQ 694
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7S2XQX1_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQX1_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.340e-19 Identity = 90/312 (28.85%), Postives = 134/312 (42.95%), Query Frame = 1 Query: 730 QEPVASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERA--KFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVT----------------------VVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQ 1593 +E V S V+V+ G CP + L+ + L ++ K+ AL MATE++ AK +L+FA+ +++R FTA++DAPNVAY+ QNF G F Q+ VV L+ E L++ P +Y T + + TV + AI+ W E+GIL+ + RC DD+YWM + A A T VV+NDLMRDH+L L+EP F RW+ + Y F + G + + P F+R+IQ Sbjct: 604 EELVVSRVTVDES-TGKCPRTGATLRLLVLDQHQKAKLGNALLKMATEQY-----AKFMGGHRGVDPKFAK--------QQMLSFAELMKKRKGPPFTAIIDAPNVAYYMQNFDQGRFNFFQIQFVVNALKRMNEHPLIIIPSKYSSDSF-YMTLWTGTGKHHTVTDEEK-AIMEKWREEGILF---------------VVPARCL----DDYYWMLASFADQTNACKATGGVMVDVPTNDKSGRWPGKRPMVVTNDLMRDHQLELMEPRIFRRWRSCHIVNYNF-TAFVNGESVDRGIGFSTPDFFSREIQ 879
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7S3T454_9SPIT (Ribonuclease P (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T454_9SPIT) HSP 1 Score: 96.7 bits (239), Expect = 1.470e-18 Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 766 GGKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILY 1275 G G CP C + L+ + L+ ER++VR+ L A E+ +GS D L F++WL ++ F V+D PNV Y NQNF GG F+ QV AV+Q L+ +G+RVL++ P +Y + +IPN T + T +S I+ W+ + I+Y Sbjct: 140 GPDGKCPCCGAQLQLLTLSNSERDEVRKVLLARAAERQGESGS------------------------DQLRTFSKWLEKQPPFDYVIDGPNVGYANQNFEGGRFEFTQVAAVLQLLQRKGKRVLLILPRKYAKDVIPNHTSSTE---RDTRISKVDRDILEEWKRQNIVY 282
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A1Z5KPE3_FISSO (Ribonuclease P n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPE3_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 5.280e-18 Identity = 122/429 (28.44%), Postives = 181/429 (42.19%), Query Frame = 1 Query: 475 LLQGLCAVPDMTMAWRVWAHM-KGQGVVATPDLYVTMLRGASLSG----------------------DLWSMVATGEVDALLAELSYEVFE--LDGDLIEQLQ--QAFNAGLQ-EP-VASMVSVESGGKGSCPACTSHLKAIGLTPREREKVRRALRVMAT---EKFPANGSAKASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRER-AKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVA---------------FDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRV--------ALEGSTESLEVDLFDPPPFTRDIQ 1593 +LQ C + + A R++ HM K GV+ D+Y +L + G +LW+ + T + LL EL+ EV + +G L++ + +A +Q +P V V +++ G CPA L+ + LTP +R++V L MA E++ A A+ + + L F+ WL++R +TA+VD PNVAY F G +QV VVQ+L+ GER LVV P++YL S ++Q LS Q AII ++ C YV +T DD+YWM +VA F +++ND MRDHRLALLEP F RW + Y A+ G S E F F+ +IQ Sbjct: 217 ILQYYC-LDKLADALRLFRHMRKAPGVILDADVYGLLLNALARHGVFTTTSNSLEGIQKYGYSQDRRELWNQLVTEMAEDLL-ELTPEVAQQIAEGFLLDAARSAEAMEHVIQTDPLVVGRVQIDAT-TGKCPATGVTLRLMALTPPQRQQVHDTLLEMAGTQHEEYGAKLQARGKAMEEKRNGQFAQ--------EQLRQFSDWLKQRETSYTAIVDGPNVAY----FGHGNVHYSQVWEVVQELQRLGERPLVVMPQKYLSRSFWLSG-LGKVQE----LSDQDQAIIDKLKD---------------CMYVVQ------STCLDDYYWMIASVADQGSTDFATLQKDQTFQLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKDGDGKAVNGEECSYETKFFPAQLFSGEIQ 604
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Match: A0A7S3XLJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ8_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 1.070e-17 Identity = 61/180 (33.89%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 1111 LEARGERVLVVCPERYL-RAIIPNSTRFARLQRKR-------TVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAF----------DNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVDLFDPPPFTRDIQV 1596 +E+ G RVLVV PERY+ R IPN+TR + R ++ + I+ W +G +Y ++ +NDDWYWMY TV D + VV+ND MRDHRL+LL P PF RW+ TQ M + + E L + DPP F+R++Q+ Sbjct: 1 MESMGHRVLVVIPERYMDREKIPNTTRIKKSNRASGKFYHPSEPVTDEQREIMDKWTAQGDIYTVAKH-------------------NNDDWYWMYATVVNRDGQAEEEEEDKEGHRLMVVTNDKMRDHRLSLLTPRPFFRWRSTQIMNF---DIRKEQDIPYLVATVLDPPVFSREVQM 158 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
BLAST of jgi.p|Trimin1|348172 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4161 ID=mRNA_4161|Name=jgi.p|Trimin1|348172|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1888bp|location=Sequence derived from alignment at Contig_20:915992..918394+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACATCAGCACCAATGGAGCGGAGCTTCTCAGCATCACGTGATGACAback to top protein sequence of jgi.p|Trimin1|348172 >Trimin1|348172|estExt_Genemark1.C_Ctg_200125 ID=Trimin1|348172|estExt_Genemark1.C_Ctg_200125|Name=jgi.p|Trimin1|348172|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=615bp MERSFSASRDDTAFAPRGTRQPPIKNNGCSPLKKSSSSSSANGNGGGRVVback to top mRNA from alignment at Contig_20:915992..918394+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4161 ID=mRNA_4161|Name=jgi.p|Trimin1|348172|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2403bp|location=Sequence derived from alignment at Contig_20:915992..918394+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_20:915992..918394+ >mRNA_4161 ID=mRNA_4161|Name=jgi.p|Trimin1|348172|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1845bp|location=Sequence derived from alignment at Contig_20:915992..918394+ (Tribonema minus UTEX_B_3156 )back to top |