mRNA_4104 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|162323
Unique Name	mRNA_4104
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835Z9Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q0_9STRA)

HSP 1 Score: 648 bits (1671), Expect = 2.510e-230
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1

Query:    1 MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW 1389
            MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW
Sbjct:    1 MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW 463

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835Z233_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z233_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.890e-45
Identity = 142/186 (76.34%), Postives = 148/186 (79.57%), Query Frame = 1

Query:  379 EAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFG 936
            EAE   ERAKVR AFAAL++     SIAAAQF ELFE LGTTYNEEAHTKTL RLQDG+GRVP DAF++WY+EWLLG  XXXXXXXXXXXXXXXXXXXXXXXXXX     GFGDMFKA AGEWKCEACLVRN P A KC SCETP  G  A AXX XXXXXXXXXXXXXXX      IGPSGF FG
Sbjct:   79 EAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGA---GFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSG----IGPSGFSFG 257

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835ZBV9_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.200e-31
Identity = 84/113 (74.34%), Postives = 87/113 (76.99%), Query Frame = 1

Query:  493 LGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAA 831
            LGTTYNEEAHTKTL+RLQD AGRV LDAF DWY+EWLLG         XXXXXXXXXXXXXXXXXX      GFGDMFKA AGEWKC+ACLVRN P A KC SCETP  GA A
Sbjct:    1 LGTTYNEEAHTKTLQRLQDAAGRVHLDAFTDWYVEWLLGGDDEASSDGXXXXXXXXXXXXXXXXXXGA----GFGDMFKAAAGEWKCDACLVRNAPGATKCASCETPAAGAVA 109

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S2L9X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9X9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-18
Identity = 83/154 (53.90%), Postives = 101/154 (65.58%), Query Frame = 1

Query:  382 AEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQ-------GFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPG 822
            AE   E  K+  AFA LN+G    SI  A F +L EA+GT Y EEAH +T+++L D +G +  DAF  WYI+WL GD   XXXXXXXXXXXXXXXXXXXXXXXXXX           +G +F   AG WKC++C+V+N P    CV+CETP PG
Sbjct:  306 AERAEELEKISVAFAELNDGKNVQSIKTADFGQLMEAMGTAYCEEAHRRTVKKL-DNSGIITQDAFTGWYIDWLFGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWGGIFATEAGSWKCDSCMVKNKPDVADCVACETPRPG 458

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4HSE8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSE8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.280e-16
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 1

Query:  376 VEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGE---WKCEACLVRNPPTAVKCVSCETPGPGAAAEA 837
            +E E   ER K   AFA+++      +I    F +L E +GTTY EE H +TLR+L    G+V  D F++WY++WL GD                             + +G+GD FK+  G+   WKC+ C+VRN P  VKC +CE   PG   EA
Sbjct:  755 MEEEKAEEREKALEAFASMSSDGE--AIPKEDFPKLIEGMGTTYCEEEHRRTLRKLAGPDGKVRKDEFVEWYLDWLFGDEDEDEEYSDKEDEEEPGEGTREGSVA---SNKGWGDAFKSTEGKEGSWKCDVCMVRNDPDLVKCAACEMVRPGHEEEA 906

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4E7X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 8.460e-16
Identity = 68/156 (43.59%), Postives = 84/156 (53.85%), Query Frame = 1

Query:  352 ADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGP 819
            AD       E E   ER   R AF  + +G     + +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P
Sbjct:  114 ADASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 258

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S3ZVY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.000e-15
Identity = 67/161 (41.61%), Postives = 83/161 (51.55%), Query Frame = 1

Query:  454 SIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFG 936
            S+ +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P A  +A                        +GP GF FG
Sbjct:  144 SVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNPAAPQKAAASGNAVSAPGS------------VGPGGFSFG 283

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7R9W639_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W639_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.520e-15
Identity = 60/153 (39.22%), Postives = 85/153 (55.56%), Query Frame = 1

Query:  385 EXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVA---GEWKCEACLVRNPPTAVKCVSCETPGPGAAAE 834
            E   ER +    F++L+      SI   +F +L EA+GTTY EE H +T++++    G+V  DAF++WY++WL G+         XXXXXXX             A QG+GD FK++    G WKCE CLV+N P ++KC +CE   PG   E
Sbjct:  121 EQADERNRAHEVFSSLSSDGD--SIPKEKFVDLIEAMGTTYCEEEHRRTIKKIAV-EGKVHRDAFVEWYVDWLFGEGEEDDEYSEXXXXXXXARDASKA------AKQGWGDTFKSMGTKPGSWKCEFCLVQNDPDSIKCAACEAVKPGCEEE 264

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4HSG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSG7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.310e-15
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 1

Query:  376 VEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGE---WKCEACLVRNPPTAVKCVSCETPGPGAAAEA 837
            +E E   ER +    F++L+      SI A  F  L EA+GTTY EE H +TLR+L  G  +V  DAF++WY+ W+  +                                G+GD FK++ GE   WKC+ C+VRN    V+C +CET  PG   EA
Sbjct:  111 LEEEKVEERNRAHEVFSSLSADGD--SIPAEDFGVLIEAMGTTYCEEEHRRTLRQLDGGDEKVHRDAFVEWYVAWVFSEGDEDEEYCEGEEEEPGEDSKEAPAPTKG----GWGDAFKSIEGEAGSWKCDTCMVRNKSGTVQCAACETVRPGHEEEA 261

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A8J2SJ63_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ63_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.090e-15
Identity = 68/156 (43.59%), Postives = 84/156 (53.85%), Query Frame = 1

Query:  352 ADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGP 819
            AD       E E   ER   R AF  + +G     + +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P
Sbjct:  954 ADASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 1098

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835Z8J0_9STRA (Putative myosin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J0_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.310e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLGRYLSLPFVVDSCSLLRTCLGFSM 390
            MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLGRYLSLPFVVDSCSLLRTCLGFSM
Sbjct:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLGRYLSLPFVVDSCSLLRTCLGFSM 130

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: D7FPS0_ECTSI (Myosin heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS0_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.780e-47
Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLG 321
            M RVREEH+ +Q V+ +LN KIS VL+KQEGDFLAAYRAHMYTVQKELQ+LRQRV++AE  LQ+NDKVQ+LED C+WYR+EALRLDSFN+AMKKDLK M  K+ +LG
Sbjct:    1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILG 107

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S2XXS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.330e-39
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 1

Query:   52 LNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVL 318
            LN KIS VLSKQE DFLAAYRAHMY VQKELQ+LRQR VDAE ALQ+NDK+Q+LE+ CEWYR+EALRLDSFN+AMKKDLK M +K+ +L
Sbjct:    4 LNDKISGVLSKQESDFLAAYRAHMYNVQKELQALRQRAVDAENALQKNDKIQKLEEECEWYRKEALRLDSFNTAMKKDLKYMKEKLEIL 92

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A3F2RK62_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK62_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.950e-28
Identity = 54/106 (50.94%), Postives = 79/106 (74.53%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVL 318
            M  VRE+H  +  V+G+L+ KISAVL++QE DFLAAYRAHMYTVQKEL  +R+++   E    +++K++++ED  +WYR+EALRLD+F + M KDLK M + +  +
Sbjct:    1 MAVVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAI 106

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S3XVS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVS7_HETAK)

HSP 1 Score: 108 bits (269), Expect = 1.150e-27
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALR 252
            M RV +EH  +Q V+G LN +ISAVL +QE  FLAAYRAHMY VQKELQ+L+ R   AE  LQ+NDK+Q+LE+ CEWYR+EALR
Sbjct:    1 MKRVDDEHRKVQEVIGQLNERISAVLGQQEAGFLAAYRAHMYNVQKELQALKARAARAENELQKNDKIQKLEEECEWYRKEALR 84

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A329RSS2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RSS2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.340e-26
Identity = 50/97 (51.55%), Postives = 74/97 (76.29%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLK 291
            M  VR++H  +  V+G+L+ KIS+VL++QE DFLAAYRAHMY VQKEL  +R+++   E    +++K++++ED  +WYR+EALRLD+F + M KDLK
Sbjct:    1 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTKMTKDLK 97

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A8J5J7K0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J7K0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.250e-26
Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRM 297
            M  VR++H  +  V+G+L+ KIS+VL++QE DFLAAYRAHMY VQKEL  +R+++   E    +++K++++ED  +WYR+EALRLD+F + M KDLK M
Sbjct:   45 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYM 143

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A2R5GNU1_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNU1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.370e-26
Identity = 55/103 (53.40%), Postives = 82/103 (79.61%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKV 309
            MGRV++ H  + SV+G+L+ K+S VL KQE +FL+AYRAHMY VQKELQ LR +V +AE  LQR++K+++L    +W+R+EALRLD++ ++MKK++K M +K+
Sbjct:   57 MGRVQDLHHQLSSVVGSLSDKVSDVLKKQESEFLSAYRAHMYNVQKELQELRTKVQNAELELQRDEKIKQLTQERDWFRKEALRLDAYATSMKKEIKFMEEKL 159

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A6A3F344_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F344_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.250e-26
Identity = 53/106 (50.00%), Postives = 78/106 (73.58%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVL 318
            M  VRE+H  +  V+G+L+ KISAVL++QE DFLAAYRAHMY VQKEL  +R+++   E    +++K++++ED  +WYR+EALRLD+F + M KDLK M + +  +
Sbjct:   42 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAI 147

[Close]

BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A8K1CGJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGJ7_PYTOL)

HSP 1 Score: 110 bits (274), Expect = 7.220e-26
Identity = 55/99 (55.56%), Postives = 75/99 (75.76%), Query Frame = 1

Query:    1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRM 297
            M  VRE+H  +  V+G+L+ KISAVL +QE DFLAAYRAHMY VQKEL  LR+++   E    +++K++++E+  +WYRREALRLD+F +AM KDLK M
Sbjct:   43 MAMVREKHAQLHEVVGSLSDKISAVLGRQEKDFLAAYRAHMYNVQKELHELREKIHRNETVENKSEKIKKIEEERDWYRREALRLDAFTTAMTKDLKYM 141

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|162323 vs. uniprot
BLAST of jgi.p|Trimin1|162323 vs. uniprot

BLAST of jgi.p|Trimin1|162323 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z9Q0_9STRA	2.510e-230	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z233_9STRA	2.890e-45	76.34	RanBP2-type domain-containing protein (Fragment) n...	[more]
A0A835ZBV9_9STRA	1.200e-31	74.34	RanBP2-type domain-containing protein (Fragment) n...	[more]
A0A7S2L9X9_9STRA	1.500e-18	53.90	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
A0A7S4HSE8_9STRA	2.280e-16	35.67	Hypothetical protein (Fragment) n=2 Tax=Odontella ...	[more]
A0A7S4E7X3_9STRA	8.460e-16	43.59	Hypothetical protein (Fragment) n=1 Tax=Pelagomona...	[more]
A0A7S3ZVY8_9STRA	1.000e-15	41.61	Hypothetical protein (Fragment) n=1 Tax=Pelagomona...	[more]
A0A7R9W639_9STRA	1.520e-15	39.22	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S4HSG7_9STRA	3.310e-15	35.03	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]
A0A8J2SJ63_9STRA	6.090e-15	43.59	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]

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BLAST of jgi.p|Trimin1|162323 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z8J0_9STRA	3.310e-84	100.00	Putative myosin heavy chain n=1 Tax=Tribonema minu...	[more]
D7FPS0_ECTSI	1.780e-47	73.83	Myosin heavy chain, putative n=1 Tax=Ectocarpus si...	[more]
A0A7S2XXS8_9STRA	5.330e-39	77.53	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A3F2RK62_9STRA	2.950e-28	50.94	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A7S3XVS7_HETAK	1.150e-27	64.29	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A329RSS2_9STRA	2.340e-26	51.55	Uncharacterized protein n=1 Tax=Phytophthora cacto...	[more]
A0A8J5J7K0_9STRA	3.250e-26	51.52	Uncharacterized protein n=1 Tax=Phytophthora aleat...	[more]
A0A2R5GNU1_9STRA	4.370e-26	53.40	Uncharacterized protein n=1 Tax=Hondaea fermentalg...	[more]
A0A6A3F344_9STRA	5.250e-26	50.00	Uncharacterized protein n=2 Tax=Phytophthora fraga...	[more]
A0A8K1CGJ7_PYTOL	7.220e-26	55.56	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_20	contig	Contig_20:552485..554802 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|162323\|e_gw1.20.87.1
Description	RNA transport
COG category	S
Max annot lvl	4776\|Peronosporales
EggNOG OGs	KOG3630@1\|root,KOG3630@2759\|Eukaryota,3Q8A6@4776\|Peronosporales
Evalue	5.14e-13
Seed ortholog	67593.Physo128959
Hectar predicted targeting category	other localisation
TranscriptId	162645
Track	FilteredModels1
ProteinId	162323

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162323	gene_4104	Tribonema minus UTEX_B_3156	gene	Contig_20 552485..554802 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162323	Trimin1\|162323\|e_gw1.20.87.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_20 552485..554802 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4104_2	exon_4104_2	Tribonema minus UTEX_B_3156	exon	Contig_20 552485..552938 -
exon_4104_1	exon_4104_1	Tribonema minus UTEX_B_3156	exon	Contig_20 553865..554802 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4104	CDS_4104	Tribonema minus UTEX_B_3156	CDS	Contig_20 553865..554802 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_20:552485..554802-
coding sequence from alignment at Contig_20:552485..554802-

spliced messenger RNA

>mRNA_4104 ID=mRNA_4104|Name=jgi.p|Trimin1|162323|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1392bp|location=Sequence derived from alignment at Contig_20:552485..554802- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTCACTGCTGTTGCTGTACGCAAGAGGCCGTGCTTCAACGAGCGC
CCAGAATTTGAAGTCTGCTTTGCTGCTCGACGTTGCAGGCGGCGCACCCG
CAAGCGGCGGCGGTTTCACTTTTGCAACGCTCAGCGCTGCAACTGCTGCA
CCAACTGGTGGCGCTGATGCACCCGAGGAGCAGCCGTCTTCTGGCGCTGG
CTTTGTGTTTGCGCACAAGGAGCCCGTTGCATTCGGCAGCCTGTCCCTGA
GCGCTGCTTCAACTGGCGACGGCGGCAGCGGCCACGCCGCGGCAGCGAGC
AGCGGCGGCGATGAGGGCGCGCTGGCAGTTACAGAGGAGTTCTCTCCTGA
AGCCGATGACGGCGGCTCTGACGACGTGGAGGCTGAGCGGGAGGAGGAGA
GGGCCAAAGTCAGGGGCGCGTTTGCCGCGCTAAATGAGGGCGGCGGCGGC
GGCAGCATCGCAGCAGCGCAGTTCGCGGAGCTCTTCGAGGCGCTCGGCAC
CACGTACAACGAGGAGGCGCACACCAAGACGCTGCGGCGCCTGCAGGACG
GTGCAGGCAGGGTGCCGCTTGACGCCTTCTTGGACTGGTACATTGAGTGG
CTGCTCGGCGATGATGACGACGCCAGTGATGACGGCAGCGCGGCGGCGGC
GGACGATGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCAGCGGAGCTGCAG
CGACGCAGGGGTTCGGGGACATGTTCAAGGCCGTTGCTGGGGAGTGGAAG
TGCGAGGCGTGCCTGGTGCGCAATCCGCCCACCGCAGTGAAGTGCGTGTC
ATGCGAGACACCAGGGCCCGGGGCGGCAGCAGAGGCGGCGCCGGCGGCAG
CAGCACCGCCGGGCGCAGCGCGGGCTGGCGGCAGGGAGACTGCAGCAGCA
GGAGGCGGTATCGGGCCATCTGGGTTCCACTTTGGTGACAGCAGCGGCGG
TACGGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGCAG
CAGGGGGCGGGGTATGGGGCGCTTTCAAGCCACCCGCGGGGCACTGGAAG
TGCAAGGTGTGCTGCGTGTACAATCGCGATGGTGCGTCAAAGTGCCAGTC
GTGCGAAACGCCGGCGGCGGACGCGGCTGCTGCGGGAGCGGGAGCGGGAG
CTTCGGCGCGCATGAGCTCAGCTGCTGCTACGGGAGGGACCATCGGTCCA
ACTGGTTTCAGCTTCGCTGCTGCAGGTGCGAATGTGGCAGGATGTGAGTC
ACTACTTCCTGCGTTTGTCAAGATGTCACTTGTGTTGTGGAGCCCACCAT
TACAGGCGTATGCCTCTTTTAGCCATCATGTCGGTCAAGCTGTGCGCAAG
CGGCGCACTTCAATAGCACCGTGCAATCTGACCATATGGTGA

protein sequence of jgi.p|Trimin1|162323

>Trimin1|162323|e_gw1.20.87.1 ID=Trimin1|162323|e_gw1.20.87.1|Name=jgi.p|Trimin1|162323|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp
MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAA
PTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAAAAS
SGGDEGALAVTEEFSPEADDGGSDDVEAEREEERAKVRGAFAALNEGGGG
GSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEW
LLGDDDDASDDGSAAAADDGGSGSGGGGGSGAAATQGFGDMFKAVAGEWK
CEACLVRNPPTAVKCVSCETPGPGAAAEAAPAAAAPPGAARAGGRETAAA
GGGIGPSGFHFGDSSGGTGSSGGGGGGGGSSGAAGGGVWGAFKPPAGHWK
CKVCCVYNRDGASKCQSCETPAADAAAAGAGAGASARMSSAAATGGTIGP
TGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRK
RRTSIAPCNLTIW*

mRNA from alignment at Contig_20:552485..554802-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4104 ID=mRNA_4104|Name=jgi.p|Trimin1|162323|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2318bp|location=Sequence derived from alignment at Contig_20:552485..554802- (Tribonema minus UTEX_B_3156 )
ATGGCTTCACTGCTGTTGCTGTACGCAAGAGGCCGTGCTTCAACGAGCGC
CCAGAATTTGAAGTCTGCTTTGCTGCTCGACGTTGCAGGCGGCGCACCCG
CAAGCGGCGGCGGTTTCACTTTTGCAACGCTCAGCGCTGCAACTGCTGCA
CCAACTGGTGGCGCTGATGCACCCGAGGAGCAGCCGTCTTCTGGCGCTGG
CTTTGTGTTTGCGCACAAGGAGCCCGTTGCATTCGGCAGCCTGTCCCTGA
GCGCTGCTTCAACTGGCGACGGCGGCAGCGGCCACGCCGCGGCAGCGAGC
AGCGGCGGCGATGAGGGCGCGCTGGCAGTTACAGAGGAGTTCTCTCCTGA
AGCCGATGACGGCGGCTCTGACGACGTGGAGGCTGAGCGGGAGGAGGAGA
GGGCCAAAGTCAGGGGCGCGTTTGCCGCGCTAAATGAGGGCGGCGGCGGC
GGCAGCATCGCAGCAGCGCAGTTCGCGGAGCTCTTCGAGGCGCTCGGCAC
CACGTACAACGAGGAGGCGCACACCAAGACGCTGCGGCGCCTGCAGGACG
GTGCAGGCAGGGTGCCGCTTGACGCCTTCTTGGACTGGTACATTGAGTGG
CTGCTCGGCGATGATGACGACGCCAGTGATGACGGCAGCGCGGCGGCGGC
GGACGATGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCAGCGGAGCTGCAG
CGACGCAGGGGTTCGGGGACATGTTCAAGGCCGTTGCTGGGGAGTGGAAG
TGCGAGGCGTGCCTGGTGCGCAATCCGCCCACCGCAGTGAAGTGCGTGTC
ATGCGAGACACCAGGGCCCGGGGCGGCAGCAGAGGCGGCGCCGGCGGCAG
CAGCACCGCCGGGCGCAGCGCGGGCTGGCGGCAGGGAGACTGCAGCAGCA
GGAGGCGGTATCGGGCCATCTGGGTTCCACTTTGGTGAGTCGCCGCGGTG
AATTGTGGTGGTCTCCACTGGAGGCACTCGAGTCATTCAATGGCGTCCCT
GTCGCATACTTGAAGTGTGTGGTACATGAGCGGCCTTAGCATCTGGCAGA
GTCTGGCGTCTCCAGCAATCAAACATGTTACGGAGGCCTGAGAGGCGCAG
AAGCAGCTTTGTCCACACTGCTGCTACACGTAATGGCTGCACACGCATAA
TCTTGCATGATGGACATAGGGTTACTCGTCAGCCGACATGGGTTGTCAAG
AGTGCTGTCCGGGATAGTAGACCTTCTGGTCCCATTCATTCTTGTACTTT
GAAGTAGTATGGTGTCACGACATTGGCAACTTGAAAGCAGCGCCGCCAAG
TGCAGTACGTTGTGTTCAAAGCAGAATGTGCAGTCGGCTGCAGACCAGGC
TTTGATTACTGACTGTGCATTCACAGAACAGGTGTGCTCACATGCTGCTC
ACAAGAGCAACAAGTTCAAGGTATTCATCCTGGCACACACTGCCCTGCTG
TCATTTTGAGGCAACCCTTGCAGTTGAGCACTGCCCACATCAGACTTTTC
TTCTACCGCATTAGGAGACACGCTTGTTGAAGTTCATGAGCTGCCGTACT
TCAAAATTGCCTCCTGCAGGAAGCGCACCTGTTGCCAGCGGCGGCGGCGG
ATTCTCCTTCTCCGCGACCACCGTCAGCAGCACTACGCCTCTACGGCCAC
CTGTGTCCACGGAAACACAAGTACCTTCGATGAGCAGCACCGCTCAGCAA
GGGGGGTTCCTGTTTGGCGGCGCCACTCCTGCCGCCAGCAATGCTCAGCC
ATCAGCTGAGCACAAGGGCGGCTTCGCATTCCGCCCATCGCCGCCCGCTT
TGACTCCGCCCATGCCAGCTGCGACGCGCAGCGACGCAGGCAGTGGCGGC
GACGGCGGCGCCAGCAGCAGCGGCGGTACGGGCAGCAGCGGCGGCGGCGG
CGGCGGCGGCGGCAGCAGCGGCGCAGCAGGGGGCGGGGTATGGGGCGCTT
TCAAGCCACCCGCGGGGCACTGGAAGTGCAAGGTGTGCTGCGTGTACAAT
CGCGATGGTGCGTCAAAGTGCCAGTCGTGCGAAACGCCGGCGGCGGACGC
GGCTGCTGCGGGAGCGGGAGCGGGAGCTTCGGCGCGCATGAGCTCAGCTG
CTGCTACGGGAGGGACCATCGGTCCAACTGGTTTCAGCTTCGCTGCTGCA
GGTGCGAATGTGGCAGGATGTGAGTCACTACTTCCTGCGTTTGTCAAGAT
GTCACTTGTGTTGTGGAGCCCACCATTACAGGCGTATGCCTCTTTTAGCC
ATCATGTCGGTCAAGCTGTGCGCAAGCGGCGCACTTCAATAGCACCGTGC
AATCTGACCATATGGTGA

Coding sequence (CDS) from alignment at Contig_20:552485..554802-

>mRNA_4104 ID=mRNA_4104|Name=jgi.p|Trimin1|162323|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_20:552485..554802- (Tribonema minus UTEX_B_3156 )
ATGGCTTCACTGCTGTTGCTGTACGCAAGAGGCCGTGCTTCAACGAGCGC
CCAGAATTTGAAGTCTGCTTTGCTGCTCGACGTTGCAGGCGGCGCACCCG
CAAGCGGCGGCGGTTTCACTTTTGCAACGCTCAGCGCTGCAACTGCTGCA
CCAACTGGTGGCGCTGATGCACCCGAGGAGCAGCCGTCTTCTGGCGCTGG
CTTTGTGTTTGCGCACAAGGAGCCCGTTGCATTCGGCAGCCTGTCCCTGA
GCGCTGCTTCAACTGGCGACGGCGGCAGCGGCCACGCCGCGGCAGCGAGC
AGCGGCGGCGATGAGGGCGCGCTGGCAGTTACAGAGGAGTTCTCTCCTGA
AGCCGATGACGGCGGCTCTGACGACGTGGAGGCTGAGCGGGAGGAGGAGA
GGGCCAAAGTCAGGGGCGCGTTTGCCGCGCTAAATGAGGGCGGCGGCGGC
GGCAGCATCGCAGCAGCGCAGTTCGCGGAGCTCTTCGAGGCGCTCGGCAC
CACGTACAACGAGGAGGCGCACACCAAGACGCTGCGGCGCCTGCAGGACG
GTGCAGGCAGGGTGCCGCTTGACGCCTTCTTGGACTGGTACATTGAGTGG
CTGCTCGGCGATGATGACGACGCCAGTGATGACGGCAGCGCGGCGGCGGC
GGACGATGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCAGCGGAGCTGCAG
CGACGCAGGGGTTCGGGGACATGTTCAAGGCCGTTGCTGGGGAGTGGAAG
TGCGAGGCGTGCCTGGTGCGCAATCCGCCCACCGCAGTGAAGTGCGTGTC
ATGCGAGACACCAGGGCCCGGGGCGGCAGCAGAGGCGGCGCCGGCGGCAG
CAGCACCGCCGGGCGCAGCGCGGGCTGGCGGCAGGGAGACTGCAGCAGCA
GGAGGCGGTATCGGGCCATCTGGGTTCCACTTTGGTGACAGCAGCGGCGG
TACGGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGCAG
CAGGGGGCGGGGTATGGGGCGCTTTCAAGCCACCCGCGGGGCACTGGAAG
TGCAAGGTGTGCTGCGTGTACAATCGCGATGGTGCGTCAAAGTGCCAGTC
GTGCGAAACGCCGGCGGCGGACGCGGCTGCTGCGGGAGCGGGAGCGGGAG
CTTCGGCGCGCATGAGCTCAGCTGCTGCTACGGGAGGGACCATCGGTCCA
ACTGGTTTCAGCTTCGCTGCTGCAGGTGCGAATGTGGCAGGATGTGAGTC
ACTACTTCCTGCGTTTGTCAAGATGTCACTTGTGTTGTGGAGCCCACCAT
TACAGGCGTATGCCTCTTTTAGCCATCATGTCGGTCAAGCTGTGCGCAAG
CGGCGCACTTCAATAGCACCGTGCAATCTGACCATATGGTGA