Trimin1|162323|e_gw1.20.87.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162323
Unique NameTrimin1|162323|e_gw1.20.87.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length464
Homology
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835Z9Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q0_9STRA)

HSP 1 Score: 648 bits (1671), Expect = 2.510e-230
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query:    1 MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW 463
            MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW
Sbjct:    1 MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAAPTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAXXXXXXXXXXXLAVTEEFSPEADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFGDSXXXXXXXXXXXXXXXXXXXXXXGVWGAFKPPAGHWKCKVCCVYNRDGASKCQSCETPAADAAXXXXXXXXXARMSSAAATGGTIGPTGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRKRRTSIAPCNLTIW 463          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835Z233_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z233_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.890e-45
Identity = 142/186 (76.34%), Postives = 148/186 (79.57%), Query Frame = 0
Query:  127 EAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFG 312
            EAE   ERAKVR AFAAL++     SIAAAQF ELFE LGTTYNEEAHTKTL RLQDG+GRVP DAF++WY+EWLLG  XXXXXXXXXXXXXXXXXXXXXXXXXX     GFGDMFKA AGEWKCEACLVRN P A KC SCETP  G  A AXX XXXXXXXXXXXXXXX      IGPSGF FG
Sbjct:   79 EAEREEERAKVREAFAALDDATSGSSIAAAQFPELFEQLGTTYNEEAHTKTLLRLQDGSGRVPRDAFMEWYVEWLLGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGA---GFGDMFKAAAGEWKCEACLVRNAPGAAKCASCETPAAGGKAAAXXGXXXXXXXXXXXXXXXSG----IGPSGFSFG 257          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A835ZBV9_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.200e-31
Identity = 84/113 (74.34%), Postives = 87/113 (76.99%), Query Frame = 0
Query:  165 LGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAA 277
            LGTTYNEEAHTKTL+RLQD AGRV LDAF DWY+EWLLG         XXXXXXXXXXXXXXXXXX      GFGDMFKA AGEWKC+ACLVRN P A KC SCETP  GA A
Sbjct:    1 LGTTYNEEAHTKTLQRLQDAAGRVHLDAFTDWYVEWLLGGDDEASSDGXXXXXXXXXXXXXXXXXXGA----GFGDMFKAAAGEWKCDACLVRNAPGATKCASCETPAAGAVA 109          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S2L9X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9X9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-18
Identity = 83/154 (53.90%), Postives = 101/154 (65.58%), Query Frame = 0
Query:  128 AEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQ-------GFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPG 274
            AE   E  K+  AFA LN+G    SI  A F +L EA+GT Y EEAH +T+++L D +G +  DAF  WYI+WL GD   XXXXXXXXXXXXXXXXXXXXXXXXXX           +G +F   AG WKC++C+V+N P    CV+CETP PG
Sbjct:  306 AERAEELEKISVAFAELNDGKNVQSIKTADFGQLMEAMGTAYCEEAHRRTVKKL-DNSGIITQDAFTGWYIDWLFGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWGGIFATEAGSWKCDSCMVKNKPDVADCVACETPRPG 458          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4HSE8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSE8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.280e-16
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 0
Query:  126 VEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGE---WKCEACLVRNPPTAVKCVSCETPGPGAAAEA 279
            +E E   ER K   AFA+++      +I    F +L E +GTTY EE H +TLR+L    G+V  D F++WY++WL GD                             + +G+GD FK+  G+   WKC+ C+VRN P  VKC +CE   PG   EA
Sbjct:  755 MEEEKAEEREKALEAFASMSSDGE--AIPKEDFPKLIEGMGTTYCEEEHRRTLRKLAGPDGKVRKDEFVEWYLDWLFGDEDEDEEYSDKEDEEEPGEGTREGSVA---SNKGWGDAFKSTEGKEGSWKCDVCMVRNDPDLVKCAACEMVRPGHEEEA 906          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4E7X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 8.460e-16
Identity = 68/156 (43.59%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  118 ADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGP 273
            AD       E E   ER   R AF  + +G     + +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P
Sbjct:  114 ADASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 258          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S3ZVY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.000e-15
Identity = 67/161 (41.61%), Postives = 83/161 (51.55%), Query Frame = 0
Query:  152 SIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGPGAAAEAXXXXXXXXXXXXXXXXXXXXXXXXIGPSGFHFG 312
            S+ +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P A  +A                        +GP GF FG
Sbjct:  144 SVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNPAAPQKAAASGNAVSAPGS------------VGPGGFSFG 283          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7R9W639_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W639_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.520e-15
Identity = 60/153 (39.22%), Postives = 85/153 (55.56%), Query Frame = 0
Query:  129 EXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVA---GEWKCEACLVRNPPTAVKCVSCETPGPGAAAE 278
            E   ER +    F++L+      SI   +F +L EA+GTTY EE H +T++++    G+V  DAF++WY++WL G+         XXXXXXX             A QG+GD FK++    G WKCE CLV+N P ++KC +CE   PG   E
Sbjct:  121 EQADERNRAHEVFSSLSSDGD--SIPKEKFVDLIEAMGTTYCEEEHRRTIKKIAV-EGKVHRDAFVEWYVDWLFGEGEEDDEYSEXXXXXXXARDASKA------AKQGWGDTFKSMGTKPGSWKCEFCLVQNDPDSIKCAACEAVKPGCEEE 264          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A7S4HSG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSG7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.310e-15
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 0
Query:  126 VEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGE---WKCEACLVRNPPTAVKCVSCETPGPGAAAEA 279
            +E E   ER +    F++L+      SI A  F  L EA+GTTY EE H +TLR+L  G  +V  DAF++WY+ W+  +                                G+GD FK++ GE   WKC+ C+VRN    V+C +CET  PG   EA
Sbjct:  111 LEEEKVEERNRAHEVFSSLSADGD--SIPAEDFGVLIEAMGTTYCEEEHRRTLRQLDGGDEKVHRDAFVEWYVAWVFSEGDEDEEYCEGEEEEPGEDSKEAPAPTKG----GWGDAFKSIEGEAGSWKCDTCMVRNKSGTVQCAACETVRPGHEEEA 261          
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Match: A0A8J2SJ63_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ63_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.090e-15
Identity = 68/156 (43.59%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  118 ADXXXXXXVEAEXXXERAKVRGAFAALNEGXXXXSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEWLLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQGFGDMFKAVAGEWKCEACLVRNPPTAVKCVSCETPGP 273
            AD       E E   ER   R AF  + +G     + +++F  L EALGTTY EE H +TLR+L  G G V  DAF++WY++W+LGD    XXXXXXXXXXX              A   +  +  A  G WKCE C VRN   A KC +CETP P
Sbjct:  954 ADASDDSGDEEEREEERGNAREAFDTVADGKT--EVPSSKFQALMEALGTTYCEEEHRRTLRKLAPG-GTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESK--------AAATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 1098          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162323 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9Q0_9STRA2.510e-230100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z233_9STRA2.890e-4576.34RanBP2-type domain-containing protein (Fragment) n... [more]
A0A835ZBV9_9STRA1.200e-3174.34RanBP2-type domain-containing protein (Fragment) n... [more]
A0A7S2L9X9_9STRA1.500e-1853.90Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4HSE8_9STRA2.280e-1635.67Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7S4E7X3_9STRA8.460e-1643.59Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A7S3ZVY8_9STRA1.000e-1541.61Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A7R9W639_9STRA1.520e-1539.22Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4HSG7_9STRA3.310e-1535.03Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A8J2SJ63_9STRA6.090e-1543.59Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 347..371
e-value: 0.0036
score: 26.5
coord: 247..271
e-value: 1.6E-7
score: 41.0
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 246..273
e-value: 8.6E-11
score: 41.0
coord: 345..372
e-value: 9.3E-7
score: 28.1
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 349..368
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 249..268
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 345..374
score: 9.359745
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 245..274
score: 10.455089
NoneNo IPR availableGENE3D4.10.1060.10coord: 340..381
e-value: 1.5E-7
score: 32.5
NoneNo IPR availableGENE3D4.10.1060.10coord: 243..280
e-value: 7.2E-13
score: 49.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..134
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 346..371
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 247..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:552485..554802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162323mRNA_4104Tribonema minus UTEX_B_3156 mRNAContig_20 552485..554802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162323|e_gw1.20.87.1 ID=Trimin1|162323|e_gw1.20.87.1|Name=jgi.p|Trimin1|162323|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp
MASLLLLYARGRASTSAQNLKSALLLDVAGGAPASGGGFTFATLSAATAA
PTGGADAPEEQPSSGAGFVFAHKEPVAFGSLSLSAASTGDGGSGHAAAAS
SGGDEGALAVTEEFSPEADDGGSDDVEAEREEERAKVRGAFAALNEGGGG
GSIAAAQFAELFEALGTTYNEEAHTKTLRRLQDGAGRVPLDAFLDWYIEW
LLGDDDDASDDGSAAAADDGGSGSGGGGGSGAAATQGFGDMFKAVAGEWK
CEACLVRNPPTAVKCVSCETPGPGAAAEAAPAAAAPPGAARAGGRETAAA
GGGIGPSGFHFGDSSGGTGSSGGGGGGGGSSGAAGGGVWGAFKPPAGHWK
CKVCCVYNRDGASKCQSCETPAADAAAAGAGAGASARMSSAAATGGTIGP
TGFSFAAAGANVAGCESLLPAFVKMSLVLWSPPLQAYASFSHHVGQAVRK
RRTSIAPCNLTIW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf