mRNA_4033 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347777
Unique NamemRNA_4033
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A835Z8J8_9STRA (Flagellar associated protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J8_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 1.320e-166
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 3
Query:    6 MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK
Sbjct:    1 MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 231          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A835YXC5_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC5_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.480e-73
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 3
Query:  135 PFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 695
            PFCLRQF D +Y GTKI + P+     +N++       H+GYA FCKH+FM NF G+EG+IV IT ENE LLR+ Y+AR P EL VL R+FPRGSVP P A  LD+ILYS +QIRKE AA  ED  S  P WG+V IKAQ VD E+PMQPITMLRNALGR +GGSGV L+A  Y ESV FWS HA +
Sbjct:   16 PFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAP-WGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 201          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.470e-69
Identity = 117/222 (52.70%), Postives = 146/222 (65.77%), Query Frame = 3
Query:   36 PCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            PC +    A S      T   MS    + + +  F +RQFTD +Y GTK+ + P +F  +VNE + A GGKL EGYA FCKH+F+ NFAG++ S V IT ENE LL   YEAR   ELP+L R+F  G+V  P A  LDIILYS EQIRKE AA  ++    E  WGI+ +K+Q VD+EIPMQPITM+RNALG+ EGGSGV L  +KY +SVEFW  HA +K
Sbjct:   30 PCPLGFPAAASRRGYKSTTTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK)

HSP 1 Score: 219 bits (559), Expect = 1.690e-68
Identity = 115/205 (56.10%), Postives = 144/205 (70.24%), Query Frame = 3
Query:   87 TAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            T ++M+++  ++V + PFC+RQFTD  Y GTKI + PDDF  ++N+ + AG   L +GYA FCKHLF+ NFAG+ GSI  IT EN  LL++ YEAR   ELPVL+R+F    VP      LDIILYS EQIRKE  A  ED  S  P WGIV +KAQ ++YEIPMQPITM+RNALG  +GGSGV L+A  Y+ SV FW+ HA IK
Sbjct:   38 TTLRMASSEREIV-IDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMGEDSGSDAP-WGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATIK 240          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT)

HSP 1 Score: 212 bits (540), Expect = 3.650e-66
Identity = 117/201 (58.21%), Postives = 134/201 (66.67%), Query Frame = 3
Query:   99 MSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARV-NEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPA-APTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 695
            MS A+     L PFCLRQF D  Y GTK+ H   DF  R+   + AG   L +GYA FCKHLF+ NF       +PIT ENE LLRT Y+AR   ELPVL R+FP  +VPAP  A  LDIILYS EQIRKE  A    D   EP WGI+ +KAQ VDYE+PMQPITM+RNALG+SEGGSGV L  +KY+ESV FW  HA I
Sbjct:    1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTEP-WGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S1TVC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVC6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.630e-63
Identity = 114/209 (54.55%), Postives = 139/209 (66.51%), Query Frame = 3
Query:   84 RTAVKMSTAAADLVGLTPFCLRQFTDST--YPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSV-PAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            RT+ +M+ A+   + L  F LRQF D    Y GTK++    +F A++NE Y AGG  L +GYA FCKH+F+ NFAG++ S +PIT ENE LLR+ YEAR   ELPVL RYFP  +V   P    LDIILYS EQI KE A            WGI+ +KAQ VDYE+PMQPITM+RNALGR +GGSGV L  +KY ESV FWS +A IK
Sbjct:   45 RTSTRMAMASTHELVLDEFALRQFNDRDPGYTGTKVSFDEAEFEAKINEAYDAGGKALVDGYAPFCKHIFVPNFAGVKASTLPITPENEHLLRSSYEARTEQELPVLSRYFPLAAVGEPPECKYLDIILYSREQIAKEAADMDRAAPDTTAPWGIISVKAQDVDYELPMQPITMMRNALGRDQGGSGVELVREKYDESVAFWSGNAPIK 253          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4I9S5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I9S5_9EUKA)

HSP 1 Score: 205 bits (522), Expect = 4.450e-63
Identity = 115/228 (50.44%), Postives = 147/228 (64.47%), Query Frame = 3
Query:   39 CIIL----CARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAP-AAPTLDIILYSGEQIRKERAA--RQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            C++L    C  A  +    + A+ MSTA      L PF +RQF D  Y GT+I H    F A++NE Y +G   L +GYA FCKH+F+ NF   + +++PIT ENE LLR+ YEAR   EL VL+R+FP  +VP P  A  LDIILYS EQI KE  A  R E D    P WGI+ +KAQ VDYE+PMQPITM+RN LG+ EGGSGV ++ ++Y+ SV FWS HA +K
Sbjct:    1 CMLLRAGGCGAARGAALRPQIALLMSTAKVPTFNLDPFAMRQFDDPNYTGTRIDHDKTGFAAKINELYDSGDYPLVDGYAPFCKHIFVPNFTPAQLNVLPITKENEHLLRSGYEARTEQELEVLVRWFPVDAVPRPPVAKYLDIILYSREQINKEATAMGRDEHDDGGSP-WGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPMDRERYTASVAFWSGHAPLK 227          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A0L0GAW9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAW9_9EUKA)

HSP 1 Score: 203 bits (516), Expect = 2.880e-62
Identity = 105/188 (55.85%), Postives = 122/188 (64.89%), Query Frame = 3
Query:  138 FCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            F +RQF D  Y GT+I   P +F A+VNE Y +G   L +GYA FCKHLF+ NF G++     ITA+N  LL+T YEAR   ELPVL+R+F    V AP A  LDIILYS EQI KE  A           WGI+ +K Q  DYE+PMQPITMLRNALGR EGGSGV L  +KYSESV FW  HA  K
Sbjct:   33 FAMRQFDDPNYTGTRIKFDPSEFEAKVNEFYTSGEATLKDGYAPFCKHLFIPNFCGVKCGYARITADNRSLLQTEYEARSEKELPVLVRFFKTEDVTAPDATHLDIILYSKEQIIKENEAMGNPGKIMSAPWGIISVKGQTKDYELPMQPITMLRNALGRDEGGSGVKLEREKYSESVNFWKEHASFK 220          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S4A4J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4J5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 8.270e-61
Identity = 109/191 (57.07%), Postives = 132/191 (69.11%), Query Frame = 3
Query:  135 PFCLRQFTDSTYPGTKITHPPDDFNARVNE-YLAGGGK--LHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAIIK 698
            PFCLRQF  ++     +  P  DF  RVNE Y A GG+  L +GYA FCKH+F++NF   +G++  IT ENE LLR+ Y AR   EL VL R+FP+ S+ AP A  LD+ILYS EQIR E AA  ED  S  P WGIV +KAQ VD E+PMQPITM+RNALG  EGGSGVAL+A KY ESV +W+ HA I+
Sbjct:   27 PFCLRQFDKTSGKAPFLDVPVADFEKRVNELYEAAGGEACLVDGYAPFCKHVFVENFVNAKGAVAAITPENEHLLRSGYSARTEKELAVLSRWFPKESIAAPTAKYLDLILYSREQIRIENAAMGEDSGSDAP-WGIVSVKAQDVDSELPMQPITMMRNALGADEGGSGVALDAAKYRESVAYWAGHAPIQ 216          
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.710e-60
Identity = 99/186 (53.23%), Postives = 124/186 (66.67%), Query Frame = 3
Query:  138 FCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 695
            FC+RQF D  Y GT + +    F  +VNEY   G  L +GYA FCKHLF+ NFAG+E SIV IT EN  L+++ Y+AR   EL VL+R+ P+  V    A  LDIILYS EQI KE  A  ++    +  WGI+ +KAQ VD+EIPMQPITM+RNALG+  GGSGV L+  KY+ESV FW +H  I
Sbjct:   76 FCIRQFDDDNYTGTNVYYDKQQFQDKVNEYHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347777 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8J8_9STRA1.320e-166100.00Flagellar associated protein n=2 Tax=Tribonema min... [more]
A0A835YXC5_9STRA5.480e-7361.50Flagellar associated protein (Fragment) n=1 Tax=Tr... [more]
D7FP80_ECTSI1.470e-6952.70Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3Y2J4_HETAK1.690e-6856.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4FA99_CHRCT3.650e-6658.21Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1TVC6_9STRA3.630e-6354.55Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4I9S5_9EUKA4.450e-6350.44Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A0L0GAW9_9EUKA2.880e-6255.85Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S4A4J5_9STRA8.270e-6157.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UWN7_9STRA1.710e-6053.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:1494640..1496543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347777|estExt_Genemark1.C_Ctg_150175
DescriptionProtein of unknown function (DUF3228)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs29VSF@1|root,2RXMS@2759|Eukaryota
Evalue1.87e-70
Seed ortholog2880.D7FP80
Hectar predicted targeting categorysignal peptide
TranscriptId348099
TrackFilteredModels1
ProteinId347777
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347777gene_4033Tribonema minus UTEX_B_3156 geneContig_15 1494640..1496543 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347777Trimin1|347777|estExt_Genemark1.C_Ctg_150175Tribonema minus UTEX_B_3156 polypeptideContig_15 1494658..1496538 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4033_3exon_4033_3Tribonema minus UTEX_B_3156 exonContig_15 1494640..1494859 -
exon_4033_2exon_4033_2Tribonema minus UTEX_B_3156 exonContig_15 1495556..1495736 -
exon_4033_1exon_4033_1Tribonema minus UTEX_B_3156 exonContig_15 1496226..1496543 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4033UTR3_4033Tribonema minus UTEX_B_3156 three_prime_UTRContig_15 1494640..1494657 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4033CDS_4033Tribonema minus UTEX_B_3156 CDSContig_15 1496226..1496538 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4033UTR5_4033Tribonema minus UTEX_B_3156 five_prime_UTRContig_15 1496539..1496543 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4033 ID=mRNA_4033|Name=jgi.p|Trimin1|347777|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=719bp|location=Sequence derived from alignment at Contig_15:1494640..1496543- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACGACATGCACGGTATACACAGCCTGGGCGTGCTACCCTGCATCATTCTG
TGCGCCAGAGCTTTCAGCAGCCATACTGCTAGCCGCACGGCAGTCAAGAT
GTCAACGGCAGCAGCAGATCTTGTAGGGTTGACTCCCTTTTGTTTGCGCC
AGTTTACAGACTCGACATACCCTGGCACCAAGATCACACACCCACCAGAT
GATTTCAATGCAAGGGTGAATGAGTACCTTGCTGGTGGGGGCAAGCTGCA
CGAAGGATACGCCGAGTTCTGCAAGCATCTGTTCATGAAAAACTTCGCAG
GCATCGAAGGATCCATAGTCCCCATCACTGCGGAGAACGAGCCGCTTCTC
CGCACCTGCTACGAAGCGCGCAGGCCTGCGGAGCTGCCGGTGCTGCTGCG
CTACTTCCCCAGGGGCAGCGTGCCCGCGCCCGCCGCCCCCACTCTCGACA
TCATCCTCTACAGCGGCGAGCAGATCCGCAAGGAGAGGGCTGCGCGACAA
GAGGACGACACCTCCTGGGAGCCGCAGTGGGGGATCGTTGGCATCAAAGC
GCAGGCCGTAGACTACGAGATACCCATGCAGCCCATCACCATGCTGCGCA
ACGCGCTCGGCAGGAGCGAGGGCGGCAGCGGCGTCGCGCTCAACGCGCAA
AAGTACTCGGAGAGCGTGGAGTTCTGGAGCGCGCACGCCATCATCAAATG
ACACACAATCAGTGCTCAA
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protein sequence of jgi.p|Trimin1|347777

>Trimin1|347777|estExt_Genemark1.C_Ctg_150175 ID=Trimin1|347777|estExt_Genemark1.C_Ctg_150175|Name=jgi.p|Trimin1|347777|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=232bp
MHGIHSLGVLPCIILCARAFSSHTASRTAVKMSTAAADLVGLTPFCLRQF
TDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGI
EGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDII
LYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNA
LGRSEGGSGVALNAQKYSESVEFWSAHAIIK*
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mRNA from alignment at Contig_15:1494640..1496543-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4033 ID=mRNA_4033|Name=jgi.p|Trimin1|347777|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1904bp|location=Sequence derived from alignment at Contig_15:1494640..1496543- (Tribonema minus UTEX_B_3156 )
ACGACATGCACGGTATACACAGCCTGGGCGTGCTACCCTGCATCATTCTG TGCGCCAGAGCTTTCAGCAGCCATACTGCTAGCCGCACGGCAGTCAAGAT GTCAACGGCAGCAGCAGATCTTGTAGGGTTGACTCCCTTTTGTTTGCGCC AGTTTACAGACTCGACATACCCTGGCACCAAGATCACACACCCACCAGAT GATTTCAATGCAAGGGTGAATGAGTACCTTGCTGGTGGGGGCAAGCTGCA CGAAGGATACGCCGAGTTCTGCAAGCATCTGTTCATGAAAAACTTCGCAG GCATCGAAGGATCCATAGGTGAGACATCCGCAATGATAAAACCCGTTCCT TCTTGGCCTTTCGATGTTGCACTGATGCCGTCAGTTGTGTACTGAAGTCA ACGCCTGCTGCCCGCTGCTGGCAGCGCATCAAACGCTGAGAGCCATAAAC CCTCTCGGATGGAGTGCAATGCTATCTTGTCTTGTCTCTCAATTGTTCTC TGATGAACAGCAGAGGTTGCGGTCATTGCACTCATGCGCACTCTTGAACA CAGGCTGCGCTGTAGTTCACGTTCATTGCCCGACAACCATTGAGCCGAGC ATGCTACACTCATCGTCAAGCTGCTTGTGGCCAGACCTCAGCACCAGCGT CGCTCACATGATCCGTCGTATACTATAGTTCACGATAATCGAGCCTGGCG TGCTACGCTCATCAAGCTGCTCGTGGCCAGACCTCTGCACCAACCATCAT GTTGCTGATCTGATCACTTGCCACACTCTTCACTCTCGGTCCCGCTGCGT GCGGCAGTCCCCATCACTGCGGAGAACGAGCCGCTTCTCCGCACCTGCTA CGAAGCGCGCAGGCCTGCGGAGCTGCCGGTGCTGCTGCGCTACTTCCCCA GGGGCAGCGTGCCCGCGCCCGCCGCCCCCACTCTCGACATCATCCTCTAC AGCGGCGAGCAGATCCGCAAGGAGAGGGCTGCGCGACAGTGAGTACTTCA ATTACATGCTGGGCTGTAATTTTGCGTTTGTGCTGAATGTGTCACCCGCT TCAGAGATGTGCACAGGCGCAAGCAACGAGCGTCGCCGCATGCAAATGGT GCCTTGCTGGTAGTATTAGGGGGGAGGGAGCGCTGTCGGTGTGTGTGGCT GCATATGAGGAGGCAGCATCACGCCGCTCTGCGCACGCAAGGGGCGCTGC TGCTGTTGCCACGTGCAGGTGCCGCTGCGGCGCGCCCTGCTGGTCGCAGC ACCTCCGCTTTGCGTACGCCACGACATGACATCAGCTGCCATGGCATTGC GCGTCGTCGTGTGGCCGCAAGGCACATCCAGCGAACTGCAGTGTTCGTTG AGTGCGAGGCACAAGCCGGCTCGTGCGCTGCTCACTCAAAGCGCTGGAAG CCCACGGCCTGCTGCGGATGTTTGACACAGCGGCGTCGCGGTATATGCAA CATGCAGATGCCTGCAATAGTCCTGGCACAGCAGCAGGTCTCCTGTGTCT CGCAACGTATGACGTCTAATCCCCCGTGTCATGCGATGCATTTATGTACA AGTCTCGGCGCGTACCGCACGAAGCCCACCACACGCGCACTCTCCTGCGC GCACCGGCCGCACTGAAGTCTTGGCGCGTACCGCACGAAGCCCACCACAT GCGCACTCTCCTGCCCGCACCGGCCGCACTGCAGAGAGGACGACACCTCC TGGGAGCCGCAGTGGGGGATCGTTGGCATCAAAGCGCAGGCCGTAGACTA CGAGATACCCATGCAGCCCATCACCATGCTGCGCAACGCGCTCGGCAGGA GCGAGGGCGGCAGCGGCGTCGCGCTCAACGCGCAAAAGTACTCGGAGAGC GTGGAGTTCTGGAGCGCGCACGCCATCATCAAATGACACACAATCAGTGC TCAA
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Coding sequence (CDS) from alignment at Contig_15:1494640..1496543-

>mRNA_4033 ID=mRNA_4033|Name=jgi.p|Trimin1|347777|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=696bp|location=Sequence derived from alignment at Contig_15:1494640..1496543- (Tribonema minus UTEX_B_3156 )
ATGCACGGTATACACAGCCTGGGCGTGCTACCCTGCATCATTCTGTGCGC
CAGAGCTTTCAGCAGCCATACTGCTAGCCGCACGGCAGTCAAGATGTCAA
CGGCAGCAGCAGATCTTGTAGGGTTGACTCCCTTTTGTTTGCGCCAGTTT
ACAGACTCGACATACCCTGGCACCAAGATCACACACCCACCAGATGATTT
CAATGCAAGGGTGAATGAGTACCTTGCTGGTGGGGGCAAGCTGCACGAAG
GATACGCCGAGTTCTGCAAGCATCTGTTCATGAAAAACTTCGCAGGCATC
GAAGGATCCATAGTCCCCATCACTGCGGAGAACGAGCCGCTTCTCCGCAC
CTGCTACGAAGCGCGCAGGCCTGCGGAGCTGCCGGTGCTGCTGCGCTACT
TCCCCAGGGGCAGCGTGCCCGCGCCCGCCGCCCCCACTCTCGACATCATC
CTCTACAGCGGCGAGCAGATCCGCAAGGAGAGGGCTGCGCGACAAGAGGA
CGACACCTCCTGGGAGCCGCAGTGGGGGATCGTTGGCATCAAAGCGCAGG
CCGTAGACTACGAGATACCCATGCAGCCCATCACCATGCTGCGCAACGCG
CTCGGCAGGAGCGAGGGCGGCAGCGGCGTCGCGCTCAACGCGCAAAAGTA
CTCGGAGAGCGTGGAGTTCTGGAGCGCGCACGCCATCATCAAATGA
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