mRNA_3908 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A836CKS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS5_9STRA) HSP 1 Score: 525 bits (1352), Expect = 1.530e-188 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 Query: 1 MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS 774 MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS Sbjct: 1 MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS 258
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1V9YAP2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAP2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.890e-20 Identity = 69/252 (27.38%), Postives = 115/252 (45.63%), Query Frame = 1 Query: 58 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEG--QLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLT------------------------EWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 + IA DP P+ + +M+ V + + + PD ++YKDEG ++KC+ V + D H L ++ VVP +L+Y++G ++Q+IL ++ +S R A A V+ RIE+ + + +G + R+T + R P AE + + DA S + W + L AL L+W+ VG+E+G+DG D P+YRCPSC ++KD Sbjct: 95 VAIAPEDPTSTVAPVVSSEMVAVRHHLVVQNALPD-VWYKDEGSRDKCLEFAVHLVD--------HSGALVQSRVVPLRISLVYDNGVTVFKQDILKVAPESQRCTDPAGRALVKVRIEDVSRNHQSQPFRLLVAPDGLADVAPDRTTPVTVRSKRNKRPAEPRPAELVSAD-DSGDAASSASASPPRWAREKRPRLAADSTIGRVLSWTRSVLQALELLEWQQVGFEIGRDGAADFGRPLYRCPSCWRYKD 336
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1V9YPE3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPE3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 5.350e-15 Identity = 68/272 (25.00%), Postives = 115/272 (42.28%), Query Frame = 1 Query: 58 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTAKARIT--------NREDAPQAC-----LVAEHL--------------------------------GMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 L I+ A P+ + M TV R++L + + ++YKDEGG++KCM + V + D H + + VP TL+YE+ + +Q+IL +S DS R + A ++ RIE+ + G A ++V Q + A T N+ PQ L A H+ +++ +++S+ W + L L+W+ +G+E DG D P+YRCP+C ++KD Sbjct: 103 LSISPAGGGHEMNPVLSNDM-TVIRHRLVIQEELPELWYKDEGGRDKCMLLPVHLVD--------HNNNTVGSRPVPLRVTLLYENEHPVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAFDLSTTISVRSKRNKRRGPQTSSALGGLKAPHIITGEGHSSPTNLDLVSPSDVDHRKRARQELDVPSSTKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 365
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A6G0WPZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPZ0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 7.140e-15 Identity = 65/250 (26.00%), Postives = 107/250 (42.80%), Query Frame = 1 Query: 97 PITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAP--------QACLVAEHLGMQREVSD-------------------AVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 PI + M T ++L + + ++YKDEGG++KCM + V + D +P VP TL+YE + +Q+IL LS DS R + + A ++ RIE+ + G A ++V Q A +++ R P + + L RE D +++S+ W + L +L+W+ +GYE DG D P+YRCP+C ++KD Sbjct: 119 PIMSTDM-TCITHRLMIQEELPELWYKDEGGRDKCMNLPVHLVDATNQPVPR---------AVPLRVTLLYESEHPVLKQDILKLSPDSQRLIDSHGQALLKLRIEDVSKNHQGQAFRLKVEPDTAQSPLFFDVAPDWSTPISVRSKRNKRRGGPIPSPHVIASSSSGIDPLDSPREGEDPRPVKRTISPSTASGPLHPSMESILRWTSSVVQGLQQLEWQPIGYETRLDGGIDKDRPIYRCPACWRYKD 358
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A485LTJ6_9STRA (Aste57867_25083 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTJ6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 7.310e-15 Identity = 67/254 (26.38%), Postives = 107/254 (42.13%), Query Frame = 1 Query: 118 ITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAPQACLVAEHLGMQ----------REVSD------------------------AVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 +T R++L + ++YKDEGG++KCM LP+H D S V VP TL+YE+ +A +Q+IL LS DS R + + A ++ RIE+ + G A ++V Q A +++ R + LG RE D +++ + +W + L +L+W+L+GYE DG D P+YRCP+C ++KD Sbjct: 125 MTCIRHRLIIQEDLPDLWYKDEGGRDKCMN------------LPVHLVDASNQTVGHRPVPLRVTLLYENEHAVLKQDILKLSPDSQRVIDSNGQALLKLRIEDVSKNHQGQAFRLKVEPDTAQSPLFFDVAPDWSTPISVRSKRNKRXXXXXXXXSSHGLGASGIDPLGPDSPRENDDHGRPAKRQIMTANGGGVGSQPLHPSMEGVLQWTGSVINGLQQLEWQLIGYETKLDGSLDRDRPLYRCPACWRYKD 366
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: T0QE37_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QE37_SAPDV) HSP 1 Score: 84.0 bits (206), Expect = 9.910e-15 Identity = 66/272 (24.26%), Postives = 118/272 (43.38%), Query Frame = 1 Query: 58 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAPQACLVA--------------------------------EHLGMQR----EVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 L I+ A PI + +M TV R++L + + ++YKDEGG++KCM + V + D H + + VP TL+YE+ + +Q+IL +S DS R + A ++ RIE+ + G A ++V Q + A +++ R P + + +HL + +++ +++S+ W + L L+W+ +G+E DG D P+YRCP+C ++KD Sbjct: 104 LSISPASSGLDVTPILSNEM-TVIRHRLVIQEELPELWYKDEGGRDKCMLLPVHLVD--------HNNNPVGSRPVPLRVTLLYENEHPVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAFDLSTTISVRSKRNKRRGPPTSSALGGLKAPHIITGESHGSPTHLDLVSPSDAKRSRQDHLDVPTSSAAKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 366
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1W0A8H7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8H7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.000e-13 Identity = 67/257 (26.07%), Postives = 109/257 (42.41%), Query Frame = 1 Query: 118 ITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTAKARIT--------NREDAPQAC-----LVAEHL-----------------------GMQRE----------VSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 735 +TV R++L + + ++YKDEGG++KCM LP+H D S V VP TL+Y++ +A +Q+IL +S DS R + A ++ RIE+ + G A ++V Q + A T N+ P L HL QR+ ++ +++S+ W + L L+W+ +G+E DG D P+YRCP+C ++KD Sbjct: 121 MTVIRHRLVIQEELPDLWYKDEGGRDKCML------------LPVHLVDQSNNPVGTRPVPLRVTLLYDNEHAVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAYDLSTPISVRSKRNKRRGPSTTSASLSLKTSHLLPGEPHGSSPTNLDLISPSEEQRKRQRQDLEIPTSSAKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 365
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1Z5K3I1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3I1_FISSO) HSP 1 Score: 73.9 bits (180), Expect = 2.390e-11 Identity = 69/256 (26.95%), Postives = 111/256 (43.36%), Query Frame = 1 Query: 37 KQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQ---PDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDG-----NAPYQQEILTLSQDSD-RQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQL--------------THHRSTAKARITN-REDAPQACLVAEHLGMQRE-VSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQF 729 + F++RL A D G T +I V R KLN+ T PD ++YKDEGG++KCM + V + D + RL H+ VP L YE A Q+IL L S ++ T+ +RFR+E+ + G + + + + ++ + ++ TN ED P A E + +AV +T W +E + ++ LQW+++GY DG D P + + F Sbjct: 116 RNAFVIRLD-AKGDVQG-----TQSAVIYVVRAKLNITTPSDWPDPVWYKDEGGRDKCMEVTVTITDKDSQRL--HES-------VPLRIELFYEAKPSGRPTAVLNQDILRLLGSSRILELDTSGQTKLRFRVEDVSKNHQGQNFVLKIQPKAEIVDIAPAWTPAVAIRSKRNKRQRSHTTNPTEDFPSPLATAPQPPHHNERLREAVNGITRWSEEVVNGIYPLQWQVMGYAQNADGSYDYNRPYHNMQNPNAF 356
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S1VP05_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VP05_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.450e-11 Identity = 69/248 (27.82%), Postives = 108/248 (43.55%), Query Frame = 1 Query: 106 AFKMITVYRYKLNVHTQPD--AMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQ---QEIL-TLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-------------------------AHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVA--EHLGMQR-----------EVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPS 717 A + I+V R+K+ V + D ++YKDEGG++KCM++ V M D ++L M +Q VP TL Y +G+ P + Q+IL TL T+ AT+RFRIE+ + G A S+ + T + AK + + QA L + E R + DA+K + +W E + L+ LQW+++GY DG D P + P+ Sbjct: 179 ATRAISVVRHKIRVTPESDWEKIWYKDEGGRDKCMSVSVSMYDK-NEQLYMGEQ-------VPLQMTLYYANGDEPIKVIKQDILKTLGAAKMYIEKTSGKATLRFRIEDVSKNHQGQDFKVEIAPDARVKGFGDVAPGFTPAVSIRSKRNKRHRTFSSTEAKQEARYQPGSRQAGLYSLPEEAARGRGEAAISTADLPRLRDAIKGVMQWTDEVVNGLYPLQWQVIGYAQNPDGSHDYNRPYHSMPN 418
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S4D5X0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5X0_HETAK) HSP 1 Score: 69.7 bits (169), Expect = 6.210e-10 Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 97 PITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG 438 P + +++T+ L V P +YKDEGGK C+T+ V ++ + LP ++A VP L+YEDG A QQ IL L++DS V AT+RFR+ E Q+ G Sbjct: 129 PPASSELMTICSALLEVVADPPTKWYKDEGGKGNCITLNVRLKGPAGEGLPEEGGPAARARPAAQEVPLFVALLYEDGKAVGQQGILQLARDSRLAVGPGAPATLRFRVGEVSQRHQG 246
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A836CMK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK8_9STRA) HSP 1 Score: 776 bits (2004), Expect = 6.310e-281 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1 Query: 1 MQPGTVFVFQMPTHREHVVYEAHAVADAVQRHRVAGWTAEDLLDGFEDAFVLWSIAAAPSGAAAEESAARGNRILPCAGAWQELSKVAAIFGELKGTTVSAXXXXXXXXXXXXXXAVAACALPASLESSHRQLLNVCMQVWSVGYARALGMASTHRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPEGETLVQQVAPLNLQLDTTLEAGGEHGASGSAQQRGSAEIIITPQLFNFMGSFHGGAICAAAEQMAAATAPAEVDGKPTWIQHMETQYFTAQKKRAALTGEYRAGGLAAGCSDVTFLSGGLKMAGSRMQWGEPPWPERACVVSELEGAVRKF 1266 MQPGTVFVFQMPTHREHVVYEAHAVADAVQRHRVAGWTAEDLLDGFEDAFVLWSIAAAPSGAAAEESAARGNRILPCAGAWQELSKVAAIFGELKGTTVSAXXXXXXXXXXXXXXAVAACALPASLESSHRQLLNVCMQVWSVGYARALGMASTHRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPEGETLVQQVAPLNLQLDTTLEAGGEHGASGSAQQRGSAEIIITPQLFNFMGSFHGGAICAAAEQMAAATAPAEVDGKPTWIQHMETQYFTAQKKRAALTGEYRAGGLAAGCSDVTFLSGGLKMAGSRMQWGEPPWPERACVVSELEGAVRKF Sbjct: 1 MQPGTVFVFQMPTHREHVVYEAHAVADAVQRHRVAGWTAEDLLDGFEDAFVLWSIAAAPSGAAAEESAARGNRILPCAGAWQELSKVAAIFGELKGTTVSAXXXXXXXXXXXXXXAVAACALPASLESSHRQLLNVCMQVWSVGYARALGMASTHRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPEGETLVQQVAPLNLQLDTTLEAGGEHGASGSAQQRGSAEIIITPQLFNFMGSFHGGAICAAAEQMAAATAPAEVDGKPTWIQHMETQYFTAQKKRAALTGEYRAGGLAAGCSDVTFLSGGLKMAGSRMQWGEPPWPERACVVSELEGAVRKF 422
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S3H750_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H750_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 4.600e-11 Identity = 67/244 (27.46%), Postives = 100/244 (40.98%), Query Frame = 1 Query: 460 THRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPE-----------GETLVQ-----QVAPLNLQLDTTLEAGGEHGASGSAQQRGSAEIIITPQLFNFMGSFHGGAICAAAEQMAAAT------------APAEVDGKPTWIQHMETQYFTAQKKRAALT 1107 THRPGL++ L+TE+ + GD++ + K GK LG+ M +N G LVARG+H++YL MG +DL+ P P AL +E ++ PE G T V Q P + +L E G + AQ + + P + N +GS HGGA+ A EQ + PA V ++ +E +Y +A K +T Sbjct: 90 THRPGLSLHLSTEIIKNVNAGDEVTFLTHADKLGKTLGFCSMEMLNSK-GELVARGKHIRYLQMGFSFDLIT-KPWALPWALKFYETFYGKKTDAMATTGETAGKGEHIFRKPLHFPELDGLGRVFELLGLTKVDPTETAQALPAVRSAEDSLLYCSEDGRADPAQVAVYG-LTVRPIVCNMLGSMHGGAVACAVEQACLLSRARNTNQKGELSGPAGVYETDCFVSSVEVRYISAMKGDLQIT 330
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A836CKF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKF5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 7.410e-9 Identity = 45/109 (41.28%), Postives = 53/109 (48.62%), Query Frame = -2 Query: 67 SALQLAKDGGDLRKLLPGARAGEYAVATRSALLSGGTA----------------------------------RSSGNGPQDECVFEPIEEVLCRPPGDTVPLHRIRDGV 291 +AL DG D K+L AR G YA+ATRSAL G+ + G+GPQ +CVF PIEEVLC PG TVPLHRIRDG+ Sbjct: 159 AALGQLYDGVDPLKVLLDARQGGYAIATRSALRGDGSCSPEVVLGLRLELQRRGGGGSGTEFVCTWAEIQRFQQFGDGPQSQCVFGPIEEVLCGEPGATVPLHRIRDGL 267
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S3HAL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAL1_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.900e-7 Identity = 32/93 (34.41%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 463 HRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMA 741 HRPG++V L TE+ + GD++ + + K G L + M +++ G+LVA+G+H+K+LPMG + ++ PL+ P L +E R+ A Sbjct: 5 HRPGVSVHLETEVVKSVCAGDEVSILTHTDKIGNTLAFSTMEILDKD-GALVAKGKHIKFLPMGTHFSVIT-HPLVLPWTLNFYEMLQKRKGA 95
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A482STT1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STT1_9ARCH) HSP 1 Score: 61.6 bits (148), Expect = 1.080e-6 Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 463 HRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHE 717 +R G++V LTTE+ + A + + + + K GK LG+ M ++ G+L+A+G+H+K+LPMG WDLV P + P+AL ++ Sbjct: 85 YRGGVSVHLTTELIKPASLNEDVVIHTTADKIGKVLGFCSMEMRSKE-GTLLAKGKHIKFLPMGWLWDLV-SHPAILPIALYFYQ 167 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|347719 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3908 ID=mRNA_3908|Name=jgi.p|Trimin1|347719|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_15:517963..523997- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGATAAGGGATCCGTTCGCTTCTGGCTTGTCGTCAAGCAAGGGTTCATback to top protein sequence of jgi.p|Trimin1|347719 >Trimin1|347719|estExt_Genemark1.C_Ctg_150055 ID=Trimin1|347719|estExt_Genemark1.C_Ctg_150055|Name=jgi.p|Trimin1|347719|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHback to top mRNA from alignment at Contig_15:517963..523997- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3908 ID=mRNA_3908|Name=jgi.p|Trimin1|347719|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6035bp|location=Sequence derived from alignment at Contig_15:517963..523997- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_15:517963..523997- >mRNA_3908 ID=mRNA_3908|Name=jgi.p|Trimin1|347719|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_15:517963..523997- (Tribonema minus UTEX_B_3156 )back to top |