Trimin1|347719|estExt_Genemark1.C_Ctg_150055 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347719
Unique NameTrimin1|347719|estExt_Genemark1.C_Ctg_150055
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length259
Homology
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A836CKS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS5_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 1.530e-188
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS 258
            MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS
Sbjct:    1 MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNSTTHRTSGS 258          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1V9YAP2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAP2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.890e-20
Identity = 69/252 (27.38%), Postives = 115/252 (45.63%), Query Frame = 0
Query:   20 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEG--QLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLT------------------------EWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            + IA  DP     P+ + +M+ V  + +  +  PD ++YKDEG ++KC+   V + D        H   L ++ VVP   +L+Y++G   ++Q+IL ++ +S R    A  A V+ RIE+  +         +   +G   +   R+T     + R   P     AE +    +  DA  S +                         W +  L AL  L+W+ VG+E+G+DG  D   P+YRCPSC ++KD
Sbjct:   95 VAIAPEDPTSTVAPVVSSEMVAVRHHLVVQNALPD-VWYKDEGSRDKCLEFAVHLVD--------HSGALVQSRVVPLRISLVYDNGVTVFKQDILKVAPESQRCTDPAGRALVKVRIEDVSRNHQSQPFRLLVAPDGLADVAPDRTTPVTVRSKRNKRPAEPRPAELVSAD-DSGDAASSASASPPRWAREKRPRLAADSTIGRVLSWTRSVLQALELLEWQQVGFEIGRDGAADFGRPLYRCPSCWRYKD 336          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1V9YPE3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPE3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.350e-15
Identity = 68/272 (25.00%), Postives = 115/272 (42.28%), Query Frame = 0
Query:   20 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTAKARIT--------NREDAPQAC-----LVAEHL--------------------------------GMQREVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            L I+ A       P+ +  M TV R++L +  +   ++YKDEGG++KCM + V + D        H  +   +  VP   TL+YE+ +   +Q+IL +S DS R +     A ++ RIE+  +   G A  ++V     Q   +   A    T        N+   PQ       L A H+                                    +++ +++S+  W    +  L  L+W+ +G+E   DG  D   P+YRCP+C ++KD
Sbjct:  103 LSISPAGGGHEMNPVLSNDM-TVIRHRLVIQEELPELWYKDEGGRDKCMLLPVHLVD--------HNNNTVGSRPVPLRVTLLYENEHPVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAFDLSTTISVRSKRNKRRGPQTSSALGGLKAPHIITGEGHSSPTNLDLVSPSDVDHRKRARQELDVPSSTKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 365          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A6G0WPZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPZ0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.140e-15
Identity = 65/250 (26.00%), Postives = 107/250 (42.80%), Query Frame = 0
Query:   33 PITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAP--------QACLVAEHLGMQREVSD-------------------AVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            PI +  M T   ++L +  +   ++YKDEGG++KCM + V + D     +P           VP   TL+YE  +   +Q+IL LS DS R + +   A ++ RIE+  +   G A  ++V     Q       A         +++   R   P         +    + L   RE  D                   +++S+  W    +  L +L+W+ +GYE   DG  D   P+YRCP+C ++KD
Sbjct:  119 PIMSTDM-TCITHRLMIQEELPELWYKDEGGRDKCMNLPVHLVDATNQPVPR---------AVPLRVTLLYESEHPVLKQDILKLSPDSQRLIDSHGQALLKLRIEDVSKNHQGQAFRLKVEPDTAQSPLFFDVAPDWSTPISVRSKRNKRRGGPIPSPHVIASSSSGIDPLDSPREGEDPRPVKRTISPSTASGPLHPSMESILRWTSSVVQGLQQLEWQPIGYETRLDGGIDKDRPIYRCPACWRYKD 358          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A485LTJ6_9STRA (Aste57867_25083 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTJ6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 7.310e-15
Identity = 67/254 (26.38%), Postives = 107/254 (42.13%), Query Frame = 0
Query:   40 ITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAPQACLVAEHLGMQ----------REVSD------------------------AVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            +T  R++L +      ++YKDEGG++KCM             LP+H  D S   V    VP   TL+YE+ +A  +Q+IL LS DS R + +   A ++ RIE+  +   G A  ++V     Q       A         +++   R         +  LG            RE  D                        +++ + +W    +  L +L+W+L+GYE   DG  D   P+YRCP+C ++KD
Sbjct:  125 MTCIRHRLIIQEDLPDLWYKDEGGRDKCMN------------LPVHLVDASNQTVGHRPVPLRVTLLYENEHAVLKQDILKLSPDSQRVIDSNGQALLKLRIEDVSKNHQGQAFRLKVEPDTAQSPLFFDVAPDWSTPISVRSKRNKRXXXXXXXXSSHGLGASGIDPLGPDSPRENDDHGRPAKRQIMTANGGGVGSQPLHPSMEGVLQWTGSVINGLQQLEWQLIGYETKLDGSLDRDRPLYRCPACWRYKD 366          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: T0QE37_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QE37_SAPDV)

HSP 1 Score: 84.0 bits (206), Expect = 9.910e-15
Identity = 66/272 (24.26%), Postives = 118/272 (43.38%), Query Frame = 0
Query:   20 LCIAAADPDGICGPITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTA---------KARITNREDAPQACLVA--------------------------------EHLGMQR----EVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            L I+ A       PI + +M TV R++L +  +   ++YKDEGG++KCM + V + D        H  +   +  VP   TL+YE+ +   +Q+IL +S DS R +     A ++ RIE+  +   G A  ++V     Q   +   A         +++   R   P +  +                                 +HL +      +++ +++S+  W    +  L  L+W+ +G+E   DG  D   P+YRCP+C ++KD
Sbjct:  104 LSISPASSGLDVTPILSNEM-TVIRHRLVIQEELPELWYKDEGGRDKCMLLPVHLVD--------HNNNPVGSRPVPLRVTLLYENEHPVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAFDLSTTISVRSKRNKRRGPPTSSALGGLKAPHIITGESHGSPTHLDLVSPSDAKRSRQDHLDVPTSSAAKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 366          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1W0A8H7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8H7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.000e-13
Identity = 67/257 (26.07%), Postives = 109/257 (42.41%), Query Frame = 0
Query:   40 ITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-AHSMEVAEQEGQLTHHRSTAKARIT--------NREDAPQAC-----LVAEHL-----------------------GMQRE----------VSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKD 245
            +TV R++L +  +   ++YKDEGG++KCM             LP+H  D S   V    VP   TL+Y++ +A  +Q+IL +S DS R +     A ++ RIE+  +   G A  ++V     Q   +   A    T        N+   P        L   HL                         QR+          ++ +++S+  W    +  L  L+W+ +G+E   DG  D   P+YRCP+C ++KD
Sbjct:  121 MTVIRHRLVIQEELPDLWYKDEGGRDKCML------------LPVHLVDQSNNPVGTRPVPLRVTLLYDNEHAVLKQDILKMSPDSQRVIDQHGKAVLKLRIEDVSKNHQGQAFRLKVEADTAQSPINFDVAYDLSTPISVRSKRNKRRGPSTTSASLSLKTSHLLPGEPHGSSPTNLDLISPSEEQRKRQRQDLEIPTSSAKMNPSMESVLSWTGSVVQGLQHLEWQPIGFETKPDGSMDRDRPIYRCPACWRYKD 365          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A1Z5K3I1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3I1_FISSO)

HSP 1 Score: 73.9 bits (180), Expect = 2.390e-11
Identity = 69/256 (26.95%), Postives = 111/256 (43.36%), Query Frame = 0
Query:   13 KQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVHTQ---PDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDG-----NAPYQQEILTLSQDSD-RQVTTAKSATVRFRIEEAQQQQLGAHSMEVAEQEGQL--------------THHRSTAKARITN-REDAPQACLVAEHLGMQRE-VSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQF 243
            +  F++RL  A  D  G     T   +I V R KLN+ T    PD ++YKDEGG++KCM + V + D  + RL  H+        VP    L YE        A   Q+IL L   S   ++ T+    +RFR+E+  +   G + +   + + ++              +      ++  TN  ED P     A       E + +AV  +T W +E +  ++ LQW+++GY    DG  D   P +   +   F
Sbjct:  116 RNAFVIRLD-AKGDVQG-----TQSAVIYVVRAKLNITTPSDWPDPVWYKDEGGRDKCMEVTVTITDKDSQRL--HES-------VPLRIELFYEAKPSGRPTAVLNQDILRLLGSSRILELDTSGQTKLRFRVEDVSKNHQGQNFVLKIQPKAEIVDIAPAWTPAVAIRSKRNKRQRSHTTNPTEDFPSPLATAPQPPHHNERLREAVNGITRWSEEVVNGIYPLQWQVMGYAQNADGSYDYNRPYHNMQNPNAF 356          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S1VP05_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VP05_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.450e-11
Identity = 69/248 (27.82%), Postives = 108/248 (43.55%), Query Frame = 0
Query:   36 AFKMITVYRYKLNVHTQPD--AMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTTLIYEDGNAPYQ---QEIL-TLSQDSDRQVTTAKSATVRFRIEEAQQQQLG-------------------------AHSMEVAEQEGQLTHHRSTAKARITNREDAPQACLVA--EHLGMQR-----------EVSDAVKSLTEWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPS 239
            A + I+V R+K+ V  + D   ++YKDEGG++KCM++ V M D   ++L M +Q       VP   TL Y +G+ P +   Q+IL TL         T+  AT+RFRIE+  +   G                         A S+     +   T   + AK     +  + QA L +  E     R            + DA+K + +W  E +  L+ LQW+++GY    DG  D   P +  P+
Sbjct:  179 ATRAISVVRHKIRVTPESDWEKIWYKDEGGRDKCMSVSVSMYDK-NEQLYMGEQ-------VPLQMTLYYANGDEPIKVIKQDILKTLGAAKMYIEKTSGKATLRFRIEDVSKNHQGQDFKVEIAPDARVKGFGDVAPGFTPAVSIRSKRNKRHRTFSSTEAKQEARYQPGSRQAGLYSLPEEAARGRGEAAISTADLPRLRDAIKGVMQWTDEVVNGLYPLQWQVIGYAQNPDGSHDYNRPYHSMPN 418          
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Match: A0A7S4D5X0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5X0_HETAK)

HSP 1 Score: 69.7 bits (169), Expect = 6.210e-10
Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   33 PITAFKMITVYRYKLNVHTQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALV----VPFTTTLIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLG 146
            P  + +++T+    L V   P   +YKDEGGK  C+T+ V ++    + LP      ++A      VP    L+YEDG A  QQ IL L++DS   V     AT+RFR+ E  Q+  G
Sbjct:  129 PPASSELMTICSALLEVVADPPTKWYKDEGGKGNCITLNVRLKGPAGEGLPEEGGPAARARPAAQEVPLFVALLYEDGKAVGQQGILQLARDSRLAVGPGAPATLRFRVGEVSQRHQG 246          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347719 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKS5_9STRA1.530e-188100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9YAP2_9STRA2.890e-2027.38Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9YPE3_9STRA5.350e-1525.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0WPZ0_9STRA7.140e-1526.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LTJ6_9STRA7.310e-1526.38Aste57867_25083 protein n=1 Tax=Aphanomyces stella... [more]
T0QE37_SAPDV9.910e-1524.26Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1W0A8H7_9STRA2.000e-1326.07Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1Z5K3I1_FISSO2.390e-1126.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1VP05_9STRA3.450e-1127.82Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4D5X0_HETAK6.210e-1035.59Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:517963..523997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347719mRNA_3908Tribonema minus UTEX_B_3156 mRNAContig_15 517963..523997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347719|estExt_Genemark1.C_Ctg_150055 ID=Trimin1|347719|estExt_Genemark1.C_Ctg_150055|Name=jgi.p|Trimin1|347719|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
MDKGSVRFWLVVKQGFMVRLCIAAADPDGICGPITAFKMITVYRYKLNVH
TQPDAMFYKDEGGKNKCMTIEVGMEDVLADRLPMHQQDLSKALVVPFTTT
LIYEDGNAPYQQEILTLSQDSDRQVTTAKSATVRFRIEEAQQQQLGAHSM
EVAEQEGQLTHHRSTAKARITNREDAPQACLVAEHLGMQREVSDAVKSLT
EWIKEALAALHELQWELVGYEVGKDGKPDTKWPMYRCPSCKQFKDPANNS
TTHRTSGS*
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