mRNA_3907 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161053
Unique NamemRNA_3907
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A836CKW3_9STRA (C2H2 zinc finger protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW3_9STRA)

HSP 1 Score: 421 bits (1082), Expect = 2.930e-147
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
Query:    1 MPAFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNIDNFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQEKAPEXXXXXXXXXXXXXXXXPEAEDSSIAEGAMRLAELVAKRKAELVSALPRAAAA 786
            MPAFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNIDNFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQEKAPEXXXXXXXXXXXXXXXXPEAEDSSIAEGAMRLAELVAKRKAELVSALPRAAAA
Sbjct:    1 MPAFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNIDNFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQEKAPEXXXXXXXXXXXXXXXXPEAEDSSIAEGAMRLAELVAKRKAELVSALPRAAAA 262          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: D8LDB0_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB0_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 5.150e-32
Identity = 87/245 (35.51%), Postives = 127/245 (51.84%), Query Frame = 1
Query:    7 AFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKV----VPDGNIDNF-VKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDG-----------------------------TQQPPXXXXXXXA-------APVSATGAPDAA--IAHTCAECGKVFATSEYLDKHMARRHP 612
            AF+FRQR G ++W KLA++DVDEVV+EVD+A LQ +LD+  F +V    +P   +D+  VKL RLSQL +EY+LHVQ  Q+  +    ++L T              S K  + ++RE ++++ +++TCQ +LRQYGID  +++  L   VAG G                             +  PP       A       A VS  GA  +   +A  C  CGK F++ ++L KHM RRHP
Sbjct:   16 AFYFRQRHGKLDWKKLARIDVDEVVREVDIAVLQDLLDEVAFCEVSAEDIPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQGLVRQLETANNNNQRLKAYAELSAKDGRRMKRESVQHKHVLNTCQSVLRQYGIDPRAIWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMPSCGSHKPSAPPPPVEDSGVAQGGHNCGAAVSGGGASTSGTPVARVCGACGKAFSSEQFLRKHMDRRHP 260          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A7S2VWI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWI1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.110e-22
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNIDNFVK---LA----RLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPP 471
            F FRQR+G+M W+KL  +DV+ +V++VDL ALQS+LD  TF+K+ P+ +    VK   LA    +L QL++EY+L+VQ   +    +  QEL      +A           +NK+L+RE+  YQ ++ TC+ +L  YG+D++ +FL    S    G   PP
Sbjct:   41 FFFRQRAGSMPWNKLETLDVERIVRDVDLDALQSLLDILTFTKLNPNISAPRDVKGESLAIRGMQLQQLIVEYLLNVQESMNQSEQTLKQELRAAAHHVADLDSQLDRLNTRNKSLKRELKMYQAVVKTCENMLTYYGLDSAEIFLAARASAGHYGKNPPP 201          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A1Y1HL47_KLENI (C2H2-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HL47_KLENI)

HSP 1 Score: 82.8 bits (203), Expect = 3.100e-14
Identity = 66/211 (31.28%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNID----NFVKLARLSQLLLEYMLHVQSY-----QDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQ 615
            F F +R   ++W KL  +DVD V++E D+  L+SILD   F  +  +   +    NFVK+ RLSQL++EY+LHVQ         L +  A+ +  TQK            +     A RR++ + +  +ST + LLR +G               G G                    AP +   H C  C K+F ++ YLD HMARRHP+
Sbjct:  129 FMFEKRRTRIDWRKLHGIDVDRVIREADIDTLESILDTIAFGDIEAEDTRNFTEFNFVKIFRLSQLMVEYLLHVQETLASHKSQLVVAGATVQRKTQKLHSTVSWHRDALA-----ATRRDLKQAKKTLSTYEILLRLHG--------------HGQGP-------------------APSSQQTHKCPTCDKLFESAYYLDLHMARRHPR 301          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A507EWM3_9FUNG (C2H2-type domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507EWM3_9FUNG)

HSP 1 Score: 81.6 bits (200), Expect = 8.120e-14
Identity = 63/204 (30.88%), Postives = 94/204 (46.08%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDG--NID-NFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHP 612
            F+F++R+  ++W  LA + VD V +EVD+ ALQ I+++ TF  +  +    +D NFVKL +++QL++EY++H Q Y      + S++L     R+A           +  AL++E         T +  L  Y         QL   V G     P                  D A  H C  C KVF +  YLD HM RRHP
Sbjct:  143 FYFKRRTERLDWRLLASLQVDRVQREVDILALQEIMENVTFCDLDSEDIRYVDPNFVKLIKIAQLIIEYLIHTQDYLAASQGALSKDLQDTSDRLALLTATYEKQDAELSALKKE-------NRTLKKTLYAY---------QLMARVPGHAPDTPNN----------------DVATYHRCGFCTKVFKSRAYLDNHMIRRHP 314          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: D8RH80_SELML (C2H2-type domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RH80_SELML)

HSP 1 Score: 76.3 bits (186), Expect = 4.920e-12
Identity = 57/211 (27.01%), Postives = 100/211 (47.39%), Query Frame = 1
Query:    4 PAFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGNID----NFVKLARLSQLLLEYMLHVQSY---QDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQ 615
            P F F++R   ++W  L  ++VD ++QE+D+  L+++LD   F  +  +   +    NF+KL RL+QL++EY+LHVQ+    Q  +L+ A      + +++         + KQ++   +++   +  + T +GLLR  G  A+               QQ                        H C  C K+F +S YLD H++RRHP+
Sbjct:   90 PPFCFQKRIARIDWRTLHAIEVDGLIQEIDIGKLETVLDTIAFGDIQGEDTRNFTEQNFIKLFRLAQLMIEYLLHVQTVLADQKSQLIGAVSGARRKGEKLRLRCLWQHDALKQSQ---KDLKHARKTLKTYEGLLRSNGKQAA--------------VQQQ----------------------VHHCPCCEKIFESSYYLDLHVSRRHPR 261          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A0L0RVW8_ALLM3 (C2H2-type domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RVW8_ALLM3)

HSP 1 Score: 75.1 bits (183), Expect = 1.250e-11
Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDG---NIDNFVKLARLSQLLLEYMLHVQSY---QDLRLLSASQELATQKKRIAXXXXXXXXS----QKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRH 609
            FHFR+R   +NW  +  VDV  V +E+DL ALQ ++D+  +  +  +       NFVKL +L+QL++EY+LH Q      D      + E A +   +              +K+ K+L++ +  YQ IM+   G                +T+ AG+GT           A  V++   P A   H C  C KVF +  YLD H+ RRH
Sbjct:   43 FHFRRRRDRINWRLIGAVDVARVQREIDLGALQEVMDNVAYCDIESEDLRYTDPNFVKLFQLAQLVIEYLLHCQDVLHSSDQGARRQATEFAAEVDHLQQQNEKQLLEIYALKKETKSLKKTIFAYQ-IMTKTPGF---------------HTAAAGNGT-----VVADRGAGRVTS---PIAVEFHRCRYCPKVFNSLGYLDGHLRRRH 228          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A507DK87_9FUNG (C2H2-type domain-containing protein n=3 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DK87_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 1.290e-11
Identity = 60/214 (28.04%), Postives = 96/214 (44.86%), Query Frame = 1
Query:    7 AFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGN--ID-NFVKLARLSQLLLEYMLHVQSY--QDLRLLS-----ASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQE 618
            AF+FR+R   +NW  LA V +D++++EVDL +LQ ++++  F  +  +    +D NFVKL ++SQL++EY+LH Q Y  +D + ++     AS   A   K            +K N+ LR+ +  YQ +     G                                      P  +   P  A  + C  C KVF +  +LD H+ RRHP +
Sbjct:   58 AFYFRKRRERLNWRALASVSLDKIIKEVDLDSLQDVMENIAFCDIEAEDLRFVDPNFVKLFKISQLMVEYLLHSQDYLVKDRQCMADELQKASISAANAAKISEAHMNELALFKKDNRMLRKSLFAYQIMAKLPNG--------------------------------------PGHSASGPVPASYNRCPYCPKVFNSQCFLDAHLCRRHPDQ 233          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A177WFB0_BATDL (C2H2-type domain-containing protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WFB0_BATDL)

HSP 1 Score: 73.9 bits (180), Expect = 1.860e-11
Identity = 60/210 (28.57%), Postives = 95/210 (45.24%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGN--ID-NFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRI-------AXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRH 609
            FHF++R   +NW  LA V+V+++++E+D+ ALQ I+ + TF  +  +    ID NFVKL +LSQL++E++LH Q +   +    S EL   K +                 ++K+ +ALR+ +  YQ +     G+ +             N S+A                           A  H C  C K F +  +LD HM RRH
Sbjct:  103 FHFKRRRERLNWRMLASVNVEKIMEELDIDALQDIMKNITFCDIEAEDLRCIDSNFVKLFQLSQLIVEFLLHSQDFLVDQRNECSSELELFKSKYNKTFELNEKLTTEAAQTKKEMRALRKTLYAYQLVAKLPGGISQ-------------NASIA---------------------------ATYHRCIHCTKSFTSQHFLDLHMQRRH 272          
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Match: A0A507C479_9FUNG (C2H2-type domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C479_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 2.360e-11
Identity = 60/214 (28.04%), Postives = 93/214 (43.46%), Query Frame = 1
Query:   10 FHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPDGN--ID-NFVKLARLSQLLLEYMLHVQSY--QDLRLLSASQELATQKKRIAXXXXXXXXSQ-----KQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDGTQQPPXXXXXXXAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHPQEK 621
            F+FR+R   +NW  LA V +D +++EVDL +LQ + ++  F  +  +    +D NFVKL +LSQL++EY+LH Q Y  +D R ++   E A+     A        ++     K N+ LR+ +  YQ +     G                                      P      P  A  + C  C KVF +  +LD H+ RRHP  +
Sbjct:   51 FYFRRRRERLNWRALAGVQLDNIIREVDLDSLQEVTENIAFCDIEAEDLRFVDPNFVKLFKLSQLMVEYLLHTQDYLVEDRRCVAEELERASASAADAIKVTDSHLNEIAVLRKDNRMLRKSLFAYQIMAKLPNG--------------------------------------PGHPGSGPVPASYNRCRYCPKVFNSEHFLDAHLRRRHPDNE 226          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161053 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKW3_9STRA2.930e-147100.00C2H2 zinc finger protein n=1 Tax=Tribonema minus T... [more]
D8LDB0_ECTSI5.150e-3235.51C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A7S2VWI1_9STRA8.110e-2237.89Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A1Y1HL47_KLENI3.100e-1431.28C2H2-type domain-containing protein n=1 Tax=Klebso... [more]
A0A507EWM3_9FUNG8.120e-1430.88C2H2-type domain-containing protein n=1 Tax=Chytri... [more]
D8RH80_SELML4.920e-1227.01C2H2-type domain-containing protein n=2 Tax=Selagi... [more]
A0A0L0RVW8_ALLM31.250e-1130.48C2H2-type domain-containing protein n=2 Tax=Allomy... [more]
A0A507DK87_9FUNG1.290e-1128.04C2H2-type domain-containing protein n=3 Tax=Synchy... [more]
A0A177WFB0_BATDL1.860e-1128.57C2H2-type domain-containing protein n=1 Tax=Batrac... [more]
A0A507C479_9FUNG2.360e-1128.04C2H2-type domain-containing protein n=1 Tax=Synchy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:512345..513271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161053|e_gw1.15.118.1
DescriptionIguana/Dzip1-like DAZ-interacting protein N-terminal
COG categoryS
Max annot lvl4751|Fungi
EggNOG OGs28IYV@1|root,2QRAI@2759|Eukaryota,38BJA@33154|Opisthokonta,3PE0T@4751|Fungi
Evalue1.79e-13
Seed ortholog28583.AMAG_19436T0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-25_001890.1
TranscriptId161375
TrackFilteredModels1
ProteinId161053
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161053gene_3907Tribonema minus UTEX_B_3156 geneContig_15 512345..513271 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161053Trimin1|161053|e_gw1.15.118.1Tribonema minus UTEX_B_3156 polypeptideContig_15 512345..513271 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3907_2exon_3907_2Tribonema minus UTEX_B_3156 exonContig_15 512345..512752 -
exon_3907_1exon_3907_1Tribonema minus UTEX_B_3156 exonContig_15 512891..513271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3907CDS_3907Tribonema minus UTEX_B_3156 CDSContig_15 512891..513271 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3907 ID=mRNA_3907|Name=jgi.p|Trimin1|161053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=789bp|location=Sequence derived from alignment at Contig_15:512345..513271- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGCTTTCCACTTCAGACAGCGTTCTGGCGCCATGAATTGGAGCAA
GCTGGCGAAAGTGGATGTGGACGAGGTGGTTCAGGAAGTTGACCTGGCTG
CATTGCAGAGCATACTCGACGATTGTACTTTCAGCAAGGTTGTCCCTGAC
GGCAACATCGACAACTTCGTCAAGCTGGCGAGGCTTAGCCAGCTGCTTCT
GGAATACATGCTGCATGTGCAGTCTTATCAGGACTTGAGACTGCTGTCGG
CGTCCCAGGAACTAGCCACCCAAAAGAAAAGGATTGCCACAGTGCAGAAA
AGTCTGGCAGCATCTCAGAAGCAGAACAAGGCGTTGCGTCGGGAAGTGCT
TCGCTATCAGACCATCATGAGCACATGCCAGGGTCTACTTCGCCAGTACG
GCATCGATGCGTCGTCGCTGTTCCTACAGCTGAACACATCCGTAGCAGGG
GATGGCACTCAGCAGCCACCACCAGTGCCGCCGCCGCCACCAGCAGCGCC
AGTTTCAGCTACTGGTGCACCTGATGCAGCGATTGCTCATACGTGTGCTG
AATGCGGCAAGGTGTTTGCGACCTCAGAGTATCTGGACAAGCATATGGCC
AGGCGACACCCACAGGAAAAGGCACCGGAAGCGCCTCCACCACCAGCAGC
GCCACCTGCGCCAGTGGAACCAACACCTCCAGAAGCTGAGGACAGTTCCA
TTGCAGAGGGGGCCATGAGACTTGCAGAACTAGTGGCAAAGCGGAAGGCT
GAGCTGGTGAGTGCGTTGCCCAGAGCTGCTGCTGCATGA
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protein sequence of jgi.p|Trimin1|161053

>Trimin1|161053|e_gw1.15.118.1 ID=Trimin1|161053|e_gw1.15.118.1|Name=jgi.p|Trimin1|161053|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MPAFHFRQRSGAMNWSKLAKVDVDEVVQEVDLAALQSILDDCTFSKVVPD
GNIDNFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIATVQK
SLAASQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAG
DGTQQPPPVPPPPPAAPVSATGAPDAAIAHTCAECGKVFATSEYLDKHMA
RRHPQEKAPEAPPPPAAPPAPVEPTPPEAEDSSIAEGAMRLAELVAKRKA
ELVSALPRAAAA*
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mRNA from alignment at Contig_15:512345..513271-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3907 ID=mRNA_3907|Name=jgi.p|Trimin1|161053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=927bp|location=Sequence derived from alignment at Contig_15:512345..513271- (Tribonema minus UTEX_B_3156 )
ATGCCCGCTTTCCACTTCAGACAGCGTTCTGGCGCCATGAATTGGAGCAA GCTGGCGAAAGTGGATGTGGACGAGGTGGTTCAGGAAGTTGACCTGGCTG CATTGCAGAGCATACTCGACGATTGTACTTTCAGCAAGGTTGTCCCTGAC GGCAACATCGACAACTTCGTCAAGCTGGCGAGGCTTAGCCAGCTGCTTCT GGAATACATGCTGCATGTGCAGTCTTATCAGGACTTGAGACTGCTGTCGG CGTCCCAGGAACTAGCCACCCAAAAGAAAAGGATTGCCACAGTGCAGAAA AGTCTGGCAGCATCTCAGAAGCAGAACAAGGCGTTGCGTCGGGAAGTGCT TCGCTATCAGACCATCATGAGCACATGCCAGGTAGGTCGTGCTTCTGCTT CAGACATGTTCCCGTGAAAGATTCTGTTGTCATTGTTGTAGCTCCTCATA GTTTGAATTCTTTCATTATCTTATACCTTGCTCCGTCTTTTGCATCGCAC ATCACGTGTTCCGGTGCAGGGTCTACTTCGCCAGTACGGCATCGATGCGT CGTCGCTGTTCCTACAGCTGAACACATCCGTAGCAGGGGATGGCACTCAG CAGCCACCACCAGTGCCGCCGCCGCCACCAGCAGCGCCAGTTTCAGCTAC TGGTGCACCTGATGCAGCGATTGCTCATACGTGTGCTGAATGCGGCAAGG TGTTTGCGACCTCAGAGTATCTGGACAAGCATATGGCCAGGCGACACCCA CAGGAAAAGGCACCGGAAGCGCCTCCACCACCAGCAGCGCCACCTGCGCC AGTGGAACCAACACCTCCAGAAGCTGAGGACAGTTCCATTGCAGAGGGGG CCATGAGACTTGCAGAACTAGTGGCAAAGCGGAAGGCTGAGCTGGTGAGT GCGTTGCCCAGAGCTGCTGCTGCATGA
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Coding sequence (CDS) from alignment at Contig_15:512345..513271-

>mRNA_3907 ID=mRNA_3907|Name=jgi.p|Trimin1|161053|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=789bp|location=Sequence derived from alignment at Contig_15:512345..513271- (Tribonema minus UTEX_B_3156 )
ATGCCCGCTTTCCACTTCAGACAGCGTTCTGGCGCCATGAATTGGAGCAA
GCTGGCGAAAGTGGATGTGGACGAGGTGGTTCAGGAAGTTGACCTGGCTG
CATTGCAGAGCATACTCGACGATTGTACTTTCAGCAAGGTTGTCCCTGAC
GGCAACATCGACAACTTCGTCAAGCTGGCGAGGCTTAGCCAGCTGCTTCT
GGAATACATGCTGCATGTGCAGTCTTATCAGGACTTGAGACTGCTGTCGG
CGTCCCAGGAACTAGCCACCCAAAAGAAAAGGATTGCCACAGTGCAGAAA
AGTCTGGCAGCATCTCAGAAGCAGAACAAGGCGTTGCGTCGGGAAGTGCT
TCGCTATCAGACCATCATGAGCACATGCCAGGGTCTACTTCGCCAGTACG
GCATCGATGCGTCGTCGCTGTTCCTACAGCTGAACACATCCGTAGCAGGG
GATGGCACTCAGCAGCCACCACCAGTGCCGCCGCCGCCACCAGCAGCGCC
AGTTTCAGCTACTGGTGCACCTGATGCAGCGATTGCTCATACGTGTGCTG
AATGCGGCAAGGTGTTTGCGACCTCAGAGTATCTGGACAAGCATATGGCC
AGGCGACACCCACAGGAAAAGGCACCGGAAGCGCCTCCACCACCAGCAGC
GCCACCTGCGCCAGTGGAACCAACACCTCCAGAAGCTGAGGACAGTTCCA
TTGCAGAGGGGGCCATGAGACTTGCAGAACTAGTGGCAAAGCGGAAGGCT
GAGCTGGTGAGTGCGTTGCCCAGAGCTGCTGCTGCATGA
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