mRNA_3452 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347965
Unique NamemRNA_3452
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z6P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P7_9STRA)

HSP 1 Score: 822 bits (2123), Expect = 9.210e-300
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 1
Query:    1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH 1287
            MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH
Sbjct:    1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH 429          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835ZG12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG12_9STRA)

HSP 1 Score: 313 bits (802), Expect = 6.280e-98
Identity = 180/417 (43.17%), Postives = 240/417 (57.55%), Query Frame = 1
Query:   52 DSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVD--SDCWVFEVDDG---AFVQHIGYHV--DADAHGYFTR--IWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSL 1275
            D+ELYGLHA+AT+LSA G +F              D R      +     AQG   A L D ++LGH+LQF G+  W+YIAGVSPHWRG YMATCA  FG  HL +T+WRE L  VET + AADAGALE   Q AL+ QLGRWG+RA +ACATG GF + L G +LV AA +GR DWFV+LG LL +    G E    + AA   A RGD G ++ WIA      +P WIV GLA++AAR GHL TLRW++    DCW F++  G   A+  ++      +  A+G F    +  +G   Y  L ETA+R+G + IV ++   +      DTV LA+   +  +A+ LL+ W            + +LA    C VAL ++AR +    W  E L+ M+ +A  V+NA +A WLRS+
Sbjct:  121 DAELYGLHAIATRLSAVGGRFRGLEPILARLAAARDCRAEPAADRTDLCVAQGTPHAALGDRVILGHILQFTGKRSWVYIAGVSPHWRGAYMATCAMQFGLAHLCRTSWREVLTSVETFVAAADAGALEETHQPALQHQLGRWGSRALVACATGAGFDVPLHGPILVGAAETGRADWFVYLGQLLVKRGRLGIEDA--IKAAVAAARRGDSGEVMAWIASLKLAGVPRWIVAGLAAVAARHGHLATLRWMITHADDCWGFKLGLGVIEAYFDNLPQRSVEEGAAYGCFEPDVMTPDGDGEYHILTETAIRSGHMHIVDYIAAELHEYVIDDTVALAVQIGRVDMAQALLTTWDAAAEDLVEDV-LPALAREPSCPVALFEFARAYSTAVWPAEDLSAMLPAANEVQNAPLAAWLRSI 534          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836C7E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7E5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.260e-93
Identity = 183/431 (42.46%), Postives = 233/431 (54.06%), Query Frame = 1
Query:    1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVV-DSDCWVFEVDDGAFVQHIGYHVDADA---HGYFTR-IWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSP-ETLAIMVASAESVRNAAVATWLRSL 1275
            M+   + G A     G D+EL+GLHA+ATQLSA G +F                      KK +   AQ A    L D ++LGH+LQF     WL+IAG+SPHWRG YMATCA+H G   L +TAWRE L  V+T   AADAG L  + Q ALR QLG+WGTR  LACA+G GF + L+GSMLVSAA SGRPDWF+HLG LL          K+ L AA   A  GD G ML W+A  G  ++P W+V GLA+ AAR GHL TLRWVV  +  W   V D  F        D D     G F + +  +    Y  LV+TAVRAG L IV++++       S ++V LA+      VA  L   W   + H +       LA +R C V L    R   +  WS  + L+ ++ + E+  N  +A WLRSL
Sbjct:   27 MRQLAKGGPAAISSPGADAELHGLHAIATQLSALGGRFHGLEPILAGLAAARGCHAEPAAKKSKSCQAQSAAHTALGDRVILGHILQFTSNRSWLFIAGLSPHWRGAYMATCARHCGVARLFRTAWREALFSVDTFAAAADAGLLRKQHQHALRRQLGKWGTRVLLACASGAGFDVALEGSMLVSAAESGRPDWFIHLGRLLVTRGV--LSRKNALLAAVTAARCGDGGGMLGWLASLGITEMPDWLVLGLATAAARHGHLHTLRWVVAHARDWGMPVPDDFFDNFAVMSCDMDEGVLFGCFEQLVGSDEFPEYYNLVDTAVRAGHLHIVQYIVGQQVATVSTESVTLAVEMGLVDVAIALQDDW---DEHDAVELMTDVLANDRNCPVELFDNIRASSLPYWSAADNLSRLLTTVEAADNVPLAAWLRSL 452          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835YI62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI62_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.820e-76
Identity = 175/424 (41.27%), Postives = 223/424 (52.59%), Query Frame = 1
Query:   82 ATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRT-------KKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGD----------EGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVD-SDCW--VFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYA--TLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASR-SAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGV 1284
            A QLSA G +F              DR             K+P+   A+ A    L D  +L HVLQFA R  W++IAGVS HWRGVYMATCA HFG  HL +TAWRE    V+  I AADAGAL+ ++Q AL  QLGRWGTRA LACATGV F + LDGSMLV AA+SG PDWF+HLG LL +        K  + AA   A  GD          +G ML WI       +P WIV G+A++AA  GHL TL WV +  D W     V D   +        A ++G F R  D  A  +A   +++ AVRAG   IV++V+       S   + LA+  R+  +A++LL   S E+    R    + +LA  R C V      R      WSPE L+ ++  AE V+NA +A WL S+  V
Sbjct:   59 AIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRL--VTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGA-SYGCFQR--DETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLD--SLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAV 475          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CCY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.290e-63
Identity = 162/431 (37.59%), Postives = 205/431 (47.56%), Query Frame = 1
Query:   16 RSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRT--KKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTR----ATLACATGVGFGLELDGSMLVSAARSGRPDWFVHL-GNLLKESDDDGFETKHLLA----AAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFE-VDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKW-SFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLR 1269
            R    TP +   D+EL+GL A+ TQLSA G  F                R    T  +K     A+ + S  L D  +LGH+LQF GR  WLYIAGV PHWRG YMATCA HFGF HL +TAWRE    V+  I AADA ALE R + ALR  LGRW T+      LACA G G    L GSML SAA SGRPDWFVHL G L++         + LL     +      RG+ G  +                        +  H + L      D W+ E V  G F   + +H+D D              +Y  L ETAVRAG L IVR+++D +    S D V LAL   +  +A+ L+  W  FEE        +  LA  R   V L     ++  G W  ETL +++ +A+   NA +  WLR
Sbjct:   31 RPAAVTPSM---DAELHGLRAIVTQLSATGSCFRGLKLVLFQLAVVEKCRTAPATAARKSELPMARSSASLALSDRSMLGHILQFVGRRSWLYIAGVGPHWRGTYMATCAMHFGFAHLLRTAWREAFSSVDAFIAAADAAALEERHRHALRRHLGRWRTQEVLACALACAAGAGVDSPLHGSMLASAAESGRPDWFVHLRGQLVR---------RQLLVWRTPSEQPLRRRGNWGFDI------------------------KRNHFDALP-----DEWLDEGVLHGCFTPDV-FHLDED-------------DKYHILSETAVRAGHLHIVRYIVDAMPRCISADAVALALRMERLDIAKALMRSWRGFEEE--LMDDVMPMLARQRNSPVELFALGWDYIDG-WRYETLLMVLRTAQESGNAPLVAWLR 403          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835ZFI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.460e-55
Identity = 149/435 (34.25%), Postives = 199/435 (45.75%), Query Frame = 1
Query:   28 ATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQ-RALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQE--GSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEV-------------DDGAFVQHIGYHVD---ADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSL 1275
            AT G +   +ELYGL A+A QL  AG+Q+                        P+  S              L  VLQF G  RWLYIAGVS HWR V MATCA+  G +HLAKT + E +  VE   VAADAG L      R ++  LG+ G+R  L+CATG+ F LELD  +L+ AA SG  +W   +G L++E+         L+ AA   A  GD+G ML WI ++  G   +P WI  GLA++AAR GH  T+ W ++     F+              DD AF     + +D   A+AH Y              L++TAV+A                                                  SA VASL   R  +VAL +WARE+  G W PET++ M+ +AE V+N  +  WL+SL
Sbjct:   17 ATLGQLAQRAELYGLQAIAAQLETAGDQYRGL---------------------PQLLSQ-------------LKTVLQFEGGGRWLYIAGVSRHWRAVLMATCARSLGLQHLAKTRYTEAVGSVEAFAVAADAGVLNDESSARHIKRALGKRGSRVILSCATGIAFKLELDMHVLLCAAESGDFEWLKLVGKLMQETQ--ALSRFELINAAVSAARSGDDGDMLGWILEQDWGEGGMPQWIGAGLATVAARHGHEFTMGWCLEDGVDRFDFPSYAEHYDDIDLDDDWAFAMQNCFEIDQRSAEAHVY-------------GLLDTAVKAD-------------------------------------------------SAVVASLTV-RSASVALFKWARENHKGQWFPETISEMLTAAERVKNKPLKAWLKSL 352          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z4A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.080e-5
Identity = 58/209 (27.75%), Postives = 82/209 (39.23%), Query Frame = 1
Query:  223 VLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAW-RETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAAR-----------GDEGVMLEWIAQEGS-DDLPTWIVPGLASIAARCGHLETLRWVVDS 810
            VLD+  L   VL+F GR  WLYIA VS   R  YMA          LA++ W    LCR      +    A E      L E + R              +G +L                +  L ++       G    H + AA   AA            GD+G  L W  Q  S +++P++++P L S+A   GHL TL+ ++ S
Sbjct:   85 VLDNTKLCSAVLEFVGRGHWLYIAAVSRGVRATYMAM---------LAQSGWDARWLCRTTVYAASQSLAAFEYAIAHGLNEPVLRT-------------YGKDLQ---------------YKPLLDIDSVQASIGATCSHDIMAAAADAADKHHEGDADFMCGDDGSALTWFLQLLSQENVPSFLLPFLCSVAVEAGHLHTLQVLLSS 256          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CK79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK79_9STRA)

HSP 1 Score: 1102 bits (2850), Expect = 0.000e+0
Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1
Query:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
            MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 618          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z1A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A9_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.070e-43
Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 1
Query: 1588 VKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
             KD A++M LDGVALWKM+PEAVKDLAIDEKGTSVTG AGLTKGKALAVVM RYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:    7 AKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835YTA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.820e-35
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 1
Query:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDAL 318
            MLAFAAARDSSSSKRH+KLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQ+WEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ ARDAL
Sbjct:    1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDAL 106          
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CKF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKF5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.320e-10
Identity = 47/96 (48.96%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 1291 ANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRG--RESRVC 1572
            ANWV+G +VP   L+RVR IV+ +AA  +AL GLTL+    E G Y L TA N+ A    Y  VL A       G+ AFKTHLGS+RG  + SR C
Sbjct:  558 ANWVEGADVPAQHLERVRTIVKAIAALDEALRGLTLTAVPGETGVYHLSTATNQRATPEVYIAVLAAA------GSSAFKTHLGSRRGGYKSSRDC 647          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z6P7_9STRA9.210e-300100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG12_9STRA6.280e-9843.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7E5_9STRA4.260e-9342.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YI62_9STRA1.820e-7641.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCY8_9STRA3.290e-6337.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFI4_9STRA1.460e-5534.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4A3_9STRA3.080e-527.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|347965 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CK79_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z1A9_9STRA1.070e-4391.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTA4_9STRA3.820e-3597.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKF5_9STRA1.320e-1048.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:1070769..1072246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347965|estExt_Genemark1.C_Ctg_170138
Hectar predicted targeting categoryother localisation
TranscriptId348287
TrackFilteredModels1
ProteinId347965
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347965gene_3452Tribonema minus UTEX_B_3156 geneContig_17 1070769..1072246 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3452_2exon_3452_2Tribonema minus UTEX_B_3156 exonContig_17 1070769..1072134 -
exon_3452_1exon_3452_1Tribonema minus UTEX_B_3156 exonContig_17 1072231..1072246 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3452UTR3_3452Tribonema minus UTEX_B_3156 three_prime_UTRContig_17 1070769..1070860 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3452CDS_3452Tribonema minus UTEX_B_3156 CDSContig_17 1072231..1072246 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347965Trimin1|347965|estExt_Genemark1.C_Ctg_170138Tribonema minus UTEX_B_3156 polypeptideContig_17 1070861..1072246 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1382bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGACGATGGGCGAAGTGGCACCGCGACTCCTGGCCTGGTAGGGCT
CGACTCCGAGCTTTACGGGCTGCACGCTGTCGCCACGCAGCTGAGTGCAG
CTGGCGAACAGTTCAGCGGTATGGAGGCTGTACTCGCTCAGCTACCAGCT
GCGAGGGACCGCAGGCTCGGTGTTAGGACGAAAAAGCCAAGATTCAGCTC
AGCTCAGGGTGCCAGAAGCGCGGTTCTGGACGACCCGCTGCTGCTCGGCC
ACGTCCTGCAGTTTGCGGGCAGGTCGAGGTGGCTATACATCGCGGGCGTC
AGCCCCCACTGGCGCGGCGTCTACATGGCGACGTGCGCGCAGCACTTCGG
CTTCGAGCACCTCGCGAAGACCGCGTGGCGCGAAACCCTCTGCCGCGTCG
AAACCCTCATCGTGGCGGCGGATGCGGGAGCGCTGGAGCCCAGGCAACAG
CGTGCCTTGCGCGAGCAGCTCGGCCGGTGGGGCACGCGCGCGACGCTCGC
CTGCGCCACCGGCGTCGGCTTCGGACTGGAGCTCGACGGCAGCATGCTCG
TGAGCGCCGCGCGCAGCGGGCGCCCCGACTGGTTCGTCCATCTCGGCAAC
CTGCTGAAGGAGTCCGACGACGACGGGTTCGAGACGAAGCACCTGCTGGC
GGCGGCCGCGGCGGCCGCCGCGCGCGGAGACGAGGGCGTCATGCTGGAGT
GGATCGCGCAGGAAGGGTCAGACGACCTGCCCACGTGGATCGTGCCGGGA
CTGGCCAGCATCGCGGCGCGCTGCGGCCACCTGGAAACGCTGCGCTGGGT
CGTGGATTCCGATTGCTGGGTTTTTGAGGTTGACGACGGCGCCTTCGTGC
AGCACATCGGCTATCATGTCGACGCCGACGCGCACGGCTACTTCACGAGG
ATCTGGGACAATGGCGCATCCAGGTACGCGACGCTCGTGGAGACGGCGGT
GAGGGCAGGGCGTCTGCAAATTGTGCGGTGGGTGCTGGACCACGTAGATG
TCGAGCAGTCGGTCGACACTGTAATTCTGGCGCTGAGCAGCAGGAAACCA
GCGGTGGCGCGGCTGCTGCTCTCTAAGTGGAGCTTTGAGGAGTCGCACGC
CTCGCGGAGCGCGGCGGTCGCGTCCCTCGCTGCAAACCGCTTCTGCACCG
TCGCGCTGCTGCAGTGGGCCAGGGAGCACGGCATGGGCGACTGGTCGCCG
GAGACGCTGGCGATCATGGTGGCGTCGGCAGAGAGCGTCCGCAACGCCGC
CGTCGCGACCTGGCTGCGGTCTCTCGATGGGGTGCACTGACGCGAATTAG
GTCGCCCTCTCGCGCATTGTAGCGCACGACCCGAATTCGATCGCCCTTTT
CGCTTAACGTAATGTACCACTTTTGCCCCTTT
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protein sequence of jgi.p|Trimin1|347965

>Trimin1|347965|estExt_Genemark1.C_Ctg_170138 ID=Trimin1|347965|estExt_Genemark1.C_Ctg_170138|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=430bp
MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSGMEAVLAQLPA
ARDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGV
SPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQ
RALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGN
LLKESDDDGFETKHLLAAAAAAAARGDEGVMLEWIAQEGSDDLPTWIVPG
LASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTR
IWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKP
AVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSP
ETLAIMVASAESVRNAAVATWLRSLDGVH*
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mRNA from alignment at Contig_17:1070769..1072246-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1478bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )
ATGAAGGACGATGGGCGTTTGTTGTGGGGGCTGTTTGTTTTGTTGTGTAT GTATGAAGTATGCGTTGCGCTTCTGCACCGACCACTTGCACGTGTCCATG CCACGCCCGCAGGAAGTGGCACCGCGACTCCTGGCCTGGTAGGGCTCGAC TCCGAGCTTTACGGGCTGCACGCTGTCGCCACGCAGCTGAGTGCAGCTGG CGAACAGTTCAGCGGTATGGAGGCTGTACTCGCTCAGCTACCAGCTGCGA GGGACCGCAGGCTCGGTGTTAGGACGAAAAAGCCAAGATTCAGCTCAGCT CAGGGTGCCAGAAGCGCGGTTCTGGACGACCCGCTGCTGCTCGGCCACGT CCTGCAGTTTGCGGGCAGGTCGAGGTGGCTATACATCGCGGGCGTCAGCC CCCACTGGCGCGGCGTCTACATGGCGACGTGCGCGCAGCACTTCGGCTTC GAGCACCTCGCGAAGACCGCGTGGCGCGAAACCCTCTGCCGCGTCGAAAC CCTCATCGTGGCGGCGGATGCGGGAGCGCTGGAGCCCAGGCAACAGCGTG CCTTGCGCGAGCAGCTCGGCCGGTGGGGCACGCGCGCGACGCTCGCCTGC GCCACCGGCGTCGGCTTCGGACTGGAGCTCGACGGCAGCATGCTCGTGAG CGCCGCGCGCAGCGGGCGCCCCGACTGGTTCGTCCATCTCGGCAACCTGC TGAAGGAGTCCGACGACGACGGGTTCGAGACGAAGCACCTGCTGGCGGCG GCCGCGGCGGCCGCCGCGCGCGGAGACGAGGGCGTCATGCTGGAGTGGAT CGCGCAGGAAGGGTCAGACGACCTGCCCACGTGGATCGTGCCGGGACTGG CCAGCATCGCGGCGCGCTGCGGCCACCTGGAAACGCTGCGCTGGGTCGTG GATTCCGATTGCTGGGTTTTTGAGGTTGACGACGGCGCCTTCGTGCAGCA CATCGGCTATCATGTCGACGCCGACGCGCACGGCTACTTCACGAGGATCT GGGACAATGGCGCATCCAGGTACGCGACGCTCGTGGAGACGGCGGTGAGG GCAGGGCGTCTGCAAATTGTGCGGTGGGTGCTGGACCACGTAGATGTCGA GCAGTCGGTCGACACTGTAATTCTGGCGCTGAGCAGCAGGAAACCAGCGG TGGCGCGGCTGCTGCTCTCTAAGTGGAGCTTTGAGGAGTCGCACGCCTCG CGGAGCGCGGCGGTCGCGTCCCTCGCTGCAAACCGCTTCTGCACCGTCGC GCTGCTGCAGTGGGCCAGGGAGCACGGCATGGGCGACTGGTCGCCGGAGA CGCTGGCGATCATGGTGGCGTCGGCAGAGAGCGTCCGCAACGCCGCCGTC GCGACCTGGCTGCGGTCTCTCGATGGGGTGCACTGACGCGAATTAGGTCG CCCTCTCGCGCATTGTAGCGCACGACCCGAATTCGATCGCCCTTTTCGCT TAACGTAATGTACCACTTTTGCCCCTTT
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Coding sequence (CDS) from alignment at Contig_17:1070769..1072246-

>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1290bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )
ATGAAGGACGATGGGCGAAGTGGCACCGCGACTCCTGGCCTGGTAGGGCT
CGACTCCGAGCTTTACGGGCTGCACGCTGTCGCCACGCAGCTGAGTGCAG
CTGGCGAACAGTTCAGCGGTATGGAGGCTGTACTCGCTCAGCTACCAGCT
GCGAGGGACCGCAGGCTCGGTGTTAGGACGAAAAAGCCAAGATTCAGCTC
AGCTCAGGGTGCCAGAAGCGCGGTTCTGGACGACCCGCTGCTGCTCGGCC
ACGTCCTGCAGTTTGCGGGCAGGTCGAGGTGGCTATACATCGCGGGCGTC
AGCCCCCACTGGCGCGGCGTCTACATGGCGACGTGCGCGCAGCACTTCGG
CTTCGAGCACCTCGCGAAGACCGCGTGGCGCGAAACCCTCTGCCGCGTCG
AAACCCTCATCGTGGCGGCGGATGCGGGAGCGCTGGAGCCCAGGCAACAG
CGTGCCTTGCGCGAGCAGCTCGGCCGGTGGGGCACGCGCGCGACGCTCGC
CTGCGCCACCGGCGTCGGCTTCGGACTGGAGCTCGACGGCAGCATGCTCG
TGAGCGCCGCGCGCAGCGGGCGCCCCGACTGGTTCGTCCATCTCGGCAAC
CTGCTGAAGGAGTCCGACGACGACGGGTTCGAGACGAAGCACCTGCTGGC
GGCGGCCGCGGCGGCCGCCGCGCGCGGAGACGAGGGCGTCATGCTGGAGT
GGATCGCGCAGGAAGGGTCAGACGACCTGCCCACGTGGATCGTGCCGGGA
CTGGCCAGCATCGCGGCGCGCTGCGGCCACCTGGAAACGCTGCGCTGGGT
CGTGGATTCCGATTGCTGGGTTTTTGAGGTTGACGACGGCGCCTTCGTGC
AGCACATCGGCTATCATGTCGACGCCGACGCGCACGGCTACTTCACGAGG
ATCTGGGACAATGGCGCATCCAGGTACGCGACGCTCGTGGAGACGGCGGT
GAGGGCAGGGCGTCTGCAAATTGTGCGGTGGGTGCTGGACCACGTAGATG
TCGAGCAGTCGGTCGACACTGTAATTCTGGCGCTGAGCAGCAGGAAACCA
GCGGTGGCGCGGCTGCTGCTCTCTAAGTGGAGCTTTGAGGAGTCGCACGC
CTCGCGGAGCGCGGCGGTCGCGTCCCTCGCTGCAAACCGCTTCTGCACCG
TCGCGCTGCTGCAGTGGGCCAGGGAGCACGGCATGGGCGACTGGTCGCCG
GAGACGCTGGCGATCATGGTGGCGTCGGCAGAGAGCGTCCGCAACGCCGC
CGTCGCGACCTGGCTGCGGTCTCTCGATGGGGTGCACTGA
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