mRNA_3452 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z6P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P7_9STRA) HSP 1 Score: 822 bits (2123), Expect = 9.210e-300 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 1
Query: 1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH 1287
MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH
Sbjct: 1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGVH 429
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835ZG12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG12_9STRA) HSP 1 Score: 313 bits (802), Expect = 6.280e-98 Identity = 180/417 (43.17%), Postives = 240/417 (57.55%), Query Frame = 1
Query: 52 DSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVD--SDCWVFEVDDG---AFVQHIGYHV--DADAHGYFTR--IWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSL 1275
D+ELYGLHA+AT+LSA G +F D R + AQG A L D ++LGH+LQF G+ W+YIAGVSPHWRG YMATCA FG HL +T+WRE L VET + AADAGALE Q AL+ QLGRWG+RA +ACATG GF + L G +LV AA +GR DWFV+LG LL + G E + AA A RGD G ++ WIA +P WIV GLA++AAR GHL TLRW++ DCW F++ G A+ ++ + A+G F + +G Y L ETA+R+G + IV ++ + DTV LA+ + +A+ LL+ W + +LA C VAL ++AR + W E L+ M+ +A V+NA +A WLRS+
Sbjct: 121 DAELYGLHAIATRLSAVGGRFRGLEPILARLAAARDCRAEPAADRTDLCVAQGTPHAALGDRVILGHILQFTGKRSWVYIAGVSPHWRGAYMATCAMQFGLAHLCRTSWREVLTSVETFVAAADAGALEETHQPALQHQLGRWGSRALVACATGAGFDVPLHGPILVGAAETGRADWFVYLGQLLVKRGRLGIEDA--IKAAVAAARRGDSGEVMAWIASLKLAGVPRWIVAGLAAVAARHGHLATLRWMITHADDCWGFKLGLGVIEAYFDNLPQRSVEEGAAYGCFEPDVMTPDGDGEYHILTETAIRSGHMHIVDYIAAELHEYVIDDTVALAVQIGRVDMAQALLTTWDAAAEDLVEDV-LPALAREPSCPVALFEFARAYSTAVWPAEDLSAMLPAANEVQNAPLAAWLRSI 534
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836C7E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7E5_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.260e-93 Identity = 183/431 (42.46%), Postives = 233/431 (54.06%), Query Frame = 1
Query: 1 MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVV-DSDCWVFEVDDGAFVQHIGYHVDADA---HGYFTR-IWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSP-ETLAIMVASAESVRNAAVATWLRSL 1275
M+ + G A G D+EL+GLHA+ATQLSA G +F KK + AQ A L D ++LGH+LQF WL+IAG+SPHWRG YMATCA+H G L +TAWRE L V+T AADAG L + Q ALR QLG+WGTR LACA+G GF + L+GSMLVSAA SGRPDWF+HLG LL K+ L AA A GD G ML W+A G ++P W+V GLA+ AAR GHL TLRWVV + W V D F D D G F + + + Y LV+TAVRAG L IV++++ S ++V LA+ VA L W + H + LA +R C V L R + WS + L+ ++ + E+ N +A WLRSL
Sbjct: 27 MRQLAKGGPAAISSPGADAELHGLHAIATQLSALGGRFHGLEPILAGLAAARGCHAEPAAKKSKSCQAQSAAHTALGDRVILGHILQFTSNRSWLFIAGLSPHWRGAYMATCARHCGVARLFRTAWREALFSVDTFAAAADAGLLRKQHQHALRRQLGKWGTRVLLACASGAGFDVALEGSMLVSAAESGRPDWFIHLGRLLVTRGV--LSRKNALLAAVTAARCGDGGGMLGWLASLGITEMPDWLVLGLATAAARHGHLHTLRWVVAHARDWGMPVPDDFFDNFAVMSCDMDEGVLFGCFEQLVGSDEFPEYYNLVDTAVRAGHLHIVQYIVGQQVATVSTESVTLAVEMGLVDVAIALQDDW---DEHDAVELMTDVLANDRNCPVELFDNIRASSLPYWSAADNLSRLLTTVEAADNVPLAAWLRSL 452
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835YI62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI62_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.820e-76 Identity = 175/424 (41.27%), Postives = 223/424 (52.59%), Query Frame = 1
Query: 82 ATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRT-------KKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGD----------EGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVD-SDCW--VFEVDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYA--TLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASR-SAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSLDGV 1284
A QLSA G +F DR K+P+ A+ A L D +L HVLQFA R W++IAGVS HWRGVYMATCA HFG HL +TAWRE V+ I AADAGAL+ ++Q AL QLGRWGTRA LACATGV F + LDGSMLV AA+SG PDWF+HLG LL + K + AA A GD +G ML WI +P WIV G+A++AA GHL TL WV + D W V D + A ++G F R D A +A +++ AVRAG IV++V+ S + LA+ R+ +A++LL S E+ R + +LA R C V R WSPE L+ ++ AE V+NA +A WL S+ V
Sbjct: 59 AIQLSAVGGRFRGLEPLVAGLAAARDRWAEAAVNGNKAAAKQPKSCEARSAALKALGDRTILSHVLQFASRRSWVFIAGVSSHWRGVYMATCALHFGLAHLLRTAWREAFSSVDMFIAAADAGALDKKEQPALCHQLGRWGTRALLACATGVEFNVSLDGSMLVGAAKSGCPDWFMHLGRLLVKRRL--VTLKAAVKAAVAAARCGDNAXXXXXXXXDGSMLGWITSLKLAGMPEWIVAGMAAVAAWRGHLHTLWWVNEHKDDWGVANAVMDCYDLPRKSLEEGA-SYGCFQR--DETAEHFAYYDIIDMAVRAGHWHIVQYVVSEQVACPSGAAIALAVQLRRVDMAKVLLD--SLEDIEYERFDDVMPALARERSCPVKFFLLIRARSTFTWSPEFLSEVLTMAEEVQNATLAAWLLSIGAV 475
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CCY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY8_9STRA) HSP 1 Score: 219 bits (558), Expect = 3.290e-63 Identity = 162/431 (37.59%), Postives = 205/431 (47.56%), Query Frame = 1
Query: 16 RSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRT--KKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQRALREQLGRWGTR----ATLACATGVGFGLELDGSMLVSAARSGRPDWFVHL-GNLLKESDDDGFETKHLLA----AAXXXAARGDEGVMLEWIAQEGSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFE-VDDGAFVQHIGYHVDADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKW-SFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLR 1269
R TP + D+EL+GL A+ TQLSA G F R T +K A+ + S L D +LGH+LQF GR WLYIAGV PHWRG YMATCA HFGF HL +TAWRE V+ I AADA ALE R + ALR LGRW T+ LACA G G L GSML SAA SGRPDWFVHL G L++ + LL + RG+ G + + H + L D W+ E V G F + +H+D D +Y L ETAVRAG L IVR+++D + S D V LAL + +A+ L+ W FEE + LA R V L ++ G W ETL +++ +A+ NA + WLR
Sbjct: 31 RPAAVTPSM---DAELHGLRAIVTQLSATGSCFRGLKLVLFQLAVVEKCRTAPATAARKSELPMARSSASLALSDRSMLGHILQFVGRRSWLYIAGVGPHWRGTYMATCAMHFGFAHLLRTAWREAFSSVDAFIAAADAAALEERHRHALRRHLGRWRTQEVLACALACAAGAGVDSPLHGSMLASAAESGRPDWFVHLRGQLVR---------RQLLVWRTPSEQPLRRRGNWGFDI------------------------KRNHFDALP-----DEWLDEGVLHGCFTPDV-FHLDED-------------DKYHILSETAVRAGHLHIVRYIVDAMPRCISADAVALALRMERLDIAKALMRSWRGFEEE--LMDDVMPMLARQRNSPVELFALGWDYIDG-WRYETLLMVLRTAQESGNAPLVAWLR 403
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835ZFI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI4_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.460e-55 Identity = 149/435 (34.25%), Postives = 199/435 (45.75%), Query Frame = 1
Query: 28 ATPGLVGLDSELYGLHAVATQLSAAGEQFSXXXXXXXXXXXXXDRRLGVRTKKPRFSSAQGARSAVLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAWRETLCRVETLIVAADAGALEPRQQ-RALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAARGDEGVMLEWIAQE--GSDDLPTWIVPGLASIAARCGHLETLRWVVDSDCWVFEV-------------DDGAFVQHIGYHVD---ADAHGYFTRIWDNGASRYATLVETAVRAGRLQIVRWVLDHVDVEQSVDTVILALSSRKPAVARLLLSKWSFEESHASRSAAVASLAANRFCTVALLQWAREHGMGDWSPETLAIMVASAESVRNAAVATWLRSL 1275
AT G + +ELYGL A+A QL AG+Q+ P+ S L VLQF G RWLYIAGVS HWR V MATCA+ G +HLAKT + E + VE VAADAG L R ++ LG+ G+R L+CATG+ F LELD +L+ AA SG +W +G L++E+ L+ AA A GD+G ML WI ++ G +P WI GLA++AAR GH T+ W ++ F+ DD AF + +D A+AH Y L++TAV+A SA VASL R +VAL +WARE+ G W PET++ M+ +AE V+N + WL+SL
Sbjct: 17 ATLGQLAQRAELYGLQAIAAQLETAGDQYRGL---------------------PQLLSQ-------------LKTVLQFEGGGRWLYIAGVSRHWRAVLMATCARSLGLQHLAKTRYTEAVGSVEAFAVAADAGVLNDESSARHIKRALGKRGSRVILSCATGIAFKLELDMHVLLCAAESGDFEWLKLVGKLMQETQ--ALSRFELINAAVSAARSGDDGDMLGWILEQDWGEGGMPQWIGAGLATVAARHGHEFTMGWCLEDGVDRFDFPSYAEHYDDIDLDDDWAFAMQNCFEIDQRSAEAHVY-------------GLLDTAVKAD-------------------------------------------------SAVVASLTV-RSASVALFKWARENHKGQWFPETISEMLTAAERVKNKPLKAWLKSL 352
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z4A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A3_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 3.080e-5 Identity = 58/209 (27.75%), Postives = 82/209 (39.23%), Query Frame = 1
Query: 223 VLDDPLLLGHVLQFAGRSRWLYIAGVSPHWRGVYMATCAQHFGFEHLAKTAW-RETLCRVETLIVAADAGALEPRQQRALREQLGRWGTRATLACATGVGFGLELDGSMLVSAARSGRPDWFVHLGNLLKESDDDGFETKHLLAAAXXXAAR-----------GDEGVMLEWIAQEGS-DDLPTWIVPGLASIAARCGHLETLRWVVDS 810
VLD+ L VL+F GR WLYIA VS R YMA LA++ W LCR + A E L E + R +G +L + L ++ G H + AA AA GD+G L W Q S +++P++++P L S+A GHL TL+ ++ S
Sbjct: 85 VLDNTKLCSAVLEFVGRGHWLYIAAVSRGVRATYMAM---------LAQSGWDARWLCRTTVYAASQSLAAFEYAIAHGLNEPVLRT-------------YGKDLQ---------------YKPLLDIDSVQASIGATCSHDIMAAAADAADKHHEGDADFMCGDDGSALTWFLQLLSQENVPSFLLPFLCSVAVEAGHLHTLQVLLSS 256
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CK79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK79_9STRA) HSP 1 Score: 1102 bits (2850), Expect = 0.000e+0 Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1
Query: 1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct: 1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 618
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835Z1A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A9_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.070e-43 Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 1
Query: 1588 VKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
KD A++M LDGVALWKM+PEAVKDLAIDEKGTSVTG AGLTKGKALAVVM RYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct: 7 AKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A835YTA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA4_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.820e-35 Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 1
Query: 1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDAL 318
MLAFAAARDSSSSKRH+KLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQ+WEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ ARDAL
Sbjct: 1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDAL 106
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Match: A0A836CKF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKF5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.320e-10 Identity = 47/96 (48.96%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 1291 ANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRG--RESRVC 1572
ANWV+G +VP L+RVR IV+ +AA +AL GLTL+ E G Y L TA N+ A Y VL A G+ AFKTHLGS+RG + SR C
Sbjct: 558 ANWVEGADVPAQHLERVRTIVKAIAALDEALRGLTLTAVPGETGVYHLSTATNQRATPEVYIAVLAAA------GSSAFKTHLGSRRGGYKSSRDC 647 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
BLAST of jgi.p|Trimin1|347965 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1382bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAGGACGATGGGCGAAGTGGCACCGCGACTCCTGGCCTGGTAGGGCTback to top protein sequence of jgi.p|Trimin1|347965 >Trimin1|347965|estExt_Genemark1.C_Ctg_170138 ID=Trimin1|347965|estExt_Genemark1.C_Ctg_170138|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=430bp MKDDGRSGTATPGLVGLDSELYGLHAVATQLSAAGEQFSGMEAVLAQLPAback to top mRNA from alignment at Contig_17:1070769..1072246- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1478bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_17:1070769..1072246- >mRNA_3452 ID=mRNA_3452|Name=jgi.p|Trimin1|347965|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1290bp|location=Sequence derived from alignment at Contig_17:1070769..1072246- (Tribonema minus UTEX_B_3156 )back to top |