mRNA_2944 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347795
Unique NamemRNA_2944
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A835Z8L6_9STRA (Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L6_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.820e-102
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 2
Query:  104 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPMLLGERRGAQS 562
            MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPMLLGERRGAQS
Sbjct:    1 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPMLLGERRGAQS 153          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 6.450e-49
Identity = 82/136 (60.29%), Postives = 108/136 (79.41%), Query Frame = 2
Query:  104 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDK 511
            MRK++    + R+GR  +HR+AML+NMVTS I HERI+TTVP+AK L+ +AD MVT AK GT H +R AQ  +++  A+ KLF+VLGPRY++RPGGYTR++KL  PR GD+ADM +IEFVDR+GELRPAR VG+ +
Sbjct:    1 MRKRV---NMHRLGRDMSHRLAMLRNMVTSFIYHERIRTTVPRAKELRKVADNMVTLAKKGTPHHQRQAQGVVRENAAVVKLFEVLGPRYKDRPGGYTRVMKLQKPRKGDQADMAIIEFVDREGELRPARQVGQTR 133          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.220e-44
Identity = 73/120 (60.83%), Postives = 98/120 (81.67%), Query Frame = 2
Query:  137 RMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARP 496
            ++GR  +HR AML+NMVTSLI HERI TTVPKAK ++ LA++++ HAK G+LHSRRLA   ++++ A+ KLF+VLGPRY++R GGYTR+LKL+ PR GD A M ++E+VDR GE+R ARP
Sbjct:    9 KLGRTASHRWAMLRNMVTSLIYHERIVTTVPKAKEVRHLAEKIIKHAKNGSLHSRRLADKVVREEPAVTKLFEVLGPRYQDREGGYTRVLKLSKPRQGDNAPMAVLEYVDRPGEIRAARP 128          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.750e-44
Identity = 82/147 (55.78%), Postives = 107/147 (72.79%), Query Frame = 2
Query:  101 AMRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPMLLG 541
            AM+K+L      ++GR  AH+ AML+NMVTSLI HERI TT+PKAK L+ LAD+MV   K+G+LHSRR A + I+++  L KLF++LGPRYEER GGYTR+LKL+ PR GD AD+ +IE+VDR GE+R ARP    +E  +     G
Sbjct:   38 AMKKRLA---FRKLGRQPAHKWAMLRNMVTSLIKHERIVTTLPKAKELRKLADKMVGLGKSGSLHSRRQAGAVIRERPVLTKLFEILGPRYEEREGGYTRVLKLSRPREGDNADLAVIEYVDRPGEVRAARPPRARRERLLATTTHG 181          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.490e-41
Identity = 76/144 (52.78%), Postives = 101/144 (70.14%), Query Frame = 2
Query:  104 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPML 535
            MRK++      ++ R   H+ AML+NMVTSLI HERI TT PKAK LK LA+ M+   K G+LH+RR A + +++K AL KLF+VLGPRY ER GGYTR+L+LA PR GD A M +IE+VDR GE+R A+P    ++  +  +L
Sbjct:    1 MRKRIA---FRKLSRTPTHKWAMLRNMVTSLIYHERIVTTTPKAKELKRLAEWMIGFGKDGSLHARRQADAILREKPALTKLFEVLGPRYAERDGGYTRVLQLAKPRTGDNAPMSIIEYVDRPGEIRAAKPPASKQKSVLADVL 141          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A6T7JZV4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T7JZV4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 7.440e-41
Identity = 74/139 (53.24%), Postives = 104/139 (74.82%), Query Frame = 2
Query:  104 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPF 520
            MRK+L +    ++GR   H+ AML+NMVTSLI HERI TT+PKAK L+ LAD++V +AK G +H+++LA   +++K  + KLF+V+GPRYE+R GGYTR++KL+ PR GD A M +IE+VDR GE+R AR   K K+ +
Sbjct:    1 MRKRLAQ--FRKLGRTPDHKWAMLRNMVTSLIKHERIVTTLPKAKELRHLADKVVGYAKKGDVHAKQLALRVVREKPMVTKLFEVMGPRYEDRDGGYTRVMKLSRPRRGDNAPMAVIEYVDRPGEIRAARVPEKRKQKY 137          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.770e-41
Identity = 73/124 (58.87%), Postives = 98/124 (79.03%), Query Frame = 2
Query:  137 RMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKD 508
            ++ R ++HR AML+NMVTSLI +ERIKTTVPKAK L+ +AD MVT  K G+LH+RR +   ++DK A+ KLF VLGPRY  RPGG+TRI+++   R GD ADMC++EFVD++GELR A+PV ++
Sbjct:    9 KLNRTSSHRWAMLRNMVTSLIHYERIKTTVPKAKELRRVADWMVTLGKKGSLHARRQSLKVVRDKAAMHKLFDVLGPRYINRPGGFTRIVRVGHRR-GDAADMCVMEFVDKEGELRKAKPVDEN 131          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: A0A7S3M8Y7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Y7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.190e-40
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 2
Query:  104 MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARP 496
            MRK+ L   + ++G    HR AML+NMVTSLI HERI TTV +AK ++  A++MVTHAK G L  RRLA   +++K AL KLF++LGPRY ER GGYTR++KL  PR GD A M  +EFVDR+GELR ARP
Sbjct:    1 MRKRNL---IKQLGFDDTHRRAMLRNMVTSLIKHERIMTTVARAKVMRRFAEKMVTHAKKGNLTHRRLAAGFVREKPALVKLFEILGPRYAEREGGYTRVMKLMKPRRGDSAAMAYVEFVDREGELRKARP 128          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: W7U3L1_9STRA (Ribosomal protein l17 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3L1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.890e-40
Identity = 76/120 (63.33%), Postives = 91/120 (75.83%), Query Frame = 2
Query:  137 RMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARP 496
            ++GR ++HR AML+NMVTSL+ HERI+TT  KAK L+ +AD+MVT AK G+LH+RR A   I+ K  L KLF VLGPRY  R GGYTR+LKL   R GD A+M LIEFV R GELRPARP
Sbjct:    5 KLGRTSSHRWAMLRNMVTSLVEHERIRTTTAKAKELRRVADRMVTWAKDGSLHARRQAAMVIRTKEHLKKLFDVLGPRYLTRAGGYTRVLKLQRFRPGDAAEMSLIEFVGRPGELRPARP 124          
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Match: F0Y9R6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9R6_AURAN)

HSP 1 Score: 142 bits (359), Expect = 3.640e-40
Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  137 RMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELR 484
            ++ R ++HR+AML+NMVTSLI  ERI+TT PKAK L+  A++++T+AK G LH  RLA   ++++ AL KLF+VLGPRY  R GGYTRILKL  PR GDKA M +IEFVDR GELR
Sbjct:    4 KLNRTSSHRLAMLRNMVTSLIKWERIRTTTPKAKTLRPYAERLITYAKKGDLHGMRLAARVVREQSALRKLFEVLGPRYAARRGGYTRILKLNEPRAGDKAPMSVIEFVDRDGELR 119          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347795 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8L6_9STRA2.820e-102100.00Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribo... [more]
D7G6X7_ECTSI6.450e-4960.29Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectoc... [more]
A0A7S3QJX6_9STRA2.220e-4460.83Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0ASE6_9STRA2.750e-4455.78Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2LPJ0_9STRA3.490e-4152.78Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6T7JZV4_9STRA7.440e-4153.24Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PMY3_9STRA8.770e-4158.87Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3M8Y7_9STRA1.190e-4058.78Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7U3L1_9STRA2.890e-4063.33Ribosomal protein l17 n=1 Tax=Nannochloropsis gadi... [more]
F0Y9R6_AURAN3.640e-4061.21Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:253724..255117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347795|estExt_Genemark1.C_Ctg_160033
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
KEGG rclassRC00293,RC01792,RC01815,RC02504
KEGG ReactionR00425,R07281
KEGG ModuleM00125,M00178,M00840
KEGG Pathwayko00740,ko00790,ko01100,ko01110,ko03010,map00740,map00790,map01100,map01110,map03010
KEGG koko:K02879,ko:K14652
EC3.5.4.25,4.1.99.12
GOsGO:0000002,GO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005829,GO:0005840,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022625,GO:0022626,GO:0031974,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070013,GO:0071840,GO:0098798,GO:1990904
Descriptionstructural constituent of ribosome
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0203@1|root,KOG3280@2759|Eukaryota
Evalue6.68e-51
Seed ortholog2880.D7G6X7
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionRibosomal protein L17
Ec32 orthologEc-01_011850.1
TranscriptId348117
TrackFilteredModels1
ProteinId347795
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347795gene_2944Tribonema minus UTEX_B_3156 geneContig_16 253724..255117 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347795Trimin1|347795|estExt_Genemark1.C_Ctg_160033Tribonema minus UTEX_B_3156 polypeptideContig_16 253827..255016 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2944_1exon_2944_1Tribonema minus UTEX_B_3156 exonContig_16 253724..254020 +
exon_2944_2exon_2944_2Tribonema minus UTEX_B_3156 exonContig_16 254296..254374 +
exon_2944_3exon_2944_3Tribonema minus UTEX_B_3156 exonContig_16 254828..255117 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_2944UTR5_2944Tribonema minus UTEX_B_3156 five_prime_UTRContig_16 253724..253826 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2944CDS_2944Tribonema minus UTEX_B_3156 CDSContig_16 253827..254020 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_2944UTR3_2944Tribonema minus UTEX_B_3156 three_prime_UTRContig_16 255017..255117 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2944 ID=mRNA_2944|Name=jgi.p|Trimin1|347795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=666bp|location=Sequence derived from alignment at Contig_16:253724..255117+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCTGCTGCCAGCCTTTGCGCAACAGCTGCTTCTCAATCTGATCGCAGAG
TCCTCAAACCAAAGGCGCAGGAGTTGCTCCCTGGACCCCAGCGCGGAGGT
GCCATGAGGAAGCAGCTGTTGAAAGGAGGCCTCAGCCGCATGGGCAGGGG
CACCGCGCACAGGATAGCCATGCTCAAAAACATGGTGACCTCGCTGATCA
CACACGAGCGCATAAAGACCACGGTACCCAAGGCGAAGAACCTGAAGGTT
TTGGCAGATCAAATGGTGACACACGCAAAGACCGGGACGCTGCACAGTCG
GCGCCTGGCGCAGAGCACAATACAAGACAAGGGCGCCCTGGACAAGCTCT
TCAAGGTGCTGGGCCCACGATACGAGGAGCGACCAGGCGGCTACACGCGA
ATACTCAAGCTGGCGACGCCGCGCCTGGGCGACAAGGCGGACATGTGCCT
CATTGAGTTTGTAGACAGGCAGGGGGAGCTGCGGCCGGCGCGGCCCGTAG
GCAAGGACAAGGAGCCGTTCATGCTGCCGATGCTGCTCGGCGAGCGGCGG
GGTGCCCAATCTTGAGGAGCGCGTGTGCGTGAGCGTCGCGCACAGCGGCA
AAAGTGGGCGGCGACACCGCAAAAGTCGGCAGCAAGGCCGCGTCAAATGT
TTGATATTCCAGAGGT
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protein sequence of jgi.p|Trimin1|347795

>Trimin1|347795|estExt_Genemark1.C_Ctg_160033 ID=Trimin1|347795|estExt_Genemark1.C_Ctg_160033|Name=jgi.p|Trimin1|347795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=154bp
MRKQLLKGGLSRMGRGTAHRIAMLKNMVTSLITHERIKTTVPKAKNLKVL
ADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRI
LKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDKEPFMLPMLLGERRG
AQS*
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mRNA from alignment at Contig_16:253724..255117+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2944 ID=mRNA_2944|Name=jgi.p|Trimin1|347795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1394bp|location=Sequence derived from alignment at Contig_16:253724..255117+ (Tribonema minus UTEX_B_3156 )
GCCTGCTGCCAGCCTTTGCGCAACAGCTGCTTCTCAATCTGATCGCAGAG TCCTCAAACCAAAGGCGCAGGAGTTGCTCCCTGGACCCCAGCGCGGAGGT GCCATGAGGAAGCAGCTGTTGAAAGGAGGCCTCAGCCGCATGGGCAGGGG CACCGCGCACAGGATAGCCATGCTCAAAAACATGGTGACCTCGCTGATCA CACACGAGCGCATAAAGACCACGGTACCCAAGGCGAAGAACCTGAAGGTT TTGGCAGATCAAATGGTGACACACGCAAAGACCGGGACGCTGCACAGGTG TGTACCTCGAGTGTTTGTCATGACACGAATGACTTGTTCGCGTCATCCAA TGGTGCAGCTTTGCGCATGCCCGTGCTGCCGAGGCCAATGTTATCTCCAG CATAGATCAAGATCCATGCTGCCGATGCCAATGTTGTCTCCAGCATATTT CAAGATGATCGCATTGTCTATGAACCCCACGCGAGCAGTGCTTGTCTGCC ACTACATACTGCGCCACACCTAACGGTCAGCTGCTCTGCTCTCTGCGCTG TGTCATTCCGCTGCTGCTGCAGTCGGCGCCTGGCGCAGAGCACAATACAA GACAAGGGCGCCCTGGACAAGCTCTTCAAGGTGCTGGGCCCACGATACGA GGTGAGTTCAAGTGCCGCACGTGTATAATACAGGCGTACTTGCAAAATAT CCCACCCTTGTGGCAGCTTGATGCTATGCAATGGATGCTTCACAACTCTG GCGGCTTGCGAGCATGGCATGGTGATTAGGTGCCACGATGATGCTTAACT GTTGACCCTCGCTCCTCACACTCGCGTGCACGAAAAACCTCGAGAATGCA ATAACCAGAGCTATGCGCAGTGCGCCGTATCGTGCGGCGCTGCAGAGCGC TGCTGCTGGCTCGCTGACGCGCTCATCATTTCCACAAACCGTGCATCCCA ATGCTGCTGCTGCACGCACACACTGCCGCAATCTCATGCCACTGTAAATT CGTCCAAGCCGCCGATCAGAGCACCCCCTGGCGTCCTCTCTGATCCGCCG CCGCCGCCGCTGCTGCCGCTGCTGCTGCTGCTGCTACCGCCCCGGCCGCT ACAGGAGCGACCAGGCGGCTACACGCGAATACTCAAGCTGGCGACGCCGC GCCTGGGCGACAAGGCGGACATGTGCCTCATTGAGTTTGTAGACAGGCAG GGGGAGCTGCGGCCGGCGCGGCCCGTAGGCAAGGACAAGGAGCCGTTCAT GCTGCCGATGCTGCTCGGCGAGCGGCGGGGTGCCCAATCTTGAGGAGCGC GTGTGCGTGAGCGTCGCGCACAGCGGCAAAAGTGGGCGGCGACACCGCAA AAGTCGGCAGCAAGGCCGCGTCAAATGTTTGATATTCCAGAGGT
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Coding sequence (CDS) from alignment at Contig_16:253724..255117+

>mRNA_2944 ID=mRNA_2944|Name=jgi.p|Trimin1|347795|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=462bp|location=Sequence derived from alignment at Contig_16:253724..255117+ (Tribonema minus UTEX_B_3156 )
ATGAGGAAGCAGCTGTTGAAAGGAGGCCTCAGCCGCATGGGCAGGGGCAC
CGCGCACAGGATAGCCATGCTCAAAAACATGGTGACCTCGCTGATCACAC
ACGAGCGCATAAAGACCACGGTACCCAAGGCGAAGAACCTGAAGGTTTTG
GCAGATCAAATGGTGACACACGCAAAGACCGGGACGCTGCACAGTCGGCG
CCTGGCGCAGAGCACAATACAAGACAAGGGCGCCCTGGACAAGCTCTTCA
AGGTGCTGGGCCCACGATACGAGGAGCGACCAGGCGGCTACACGCGAATA
CTCAAGCTGGCGACGCCGCGCCTGGGCGACAAGGCGGACATGTGCCTCAT
TGAGTTTGTAGACAGGCAGGGGGAGCTGCGGCCGGCGCGGCCCGTAGGCA
AGGACAAGGAGCCGTTCATGCTGCCGATGCTGCTCGGCGAGCGGCGGGGT
GCCCAATCTTGA
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