mRNA_2533 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A835YL65_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL65_9STRA) HSP 1 Score: 483 bits (1243), Expect = 4.140e-171 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 Query: 1 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL Sbjct: 1 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 283
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A6H5K3B8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B8_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.910e-61 Identity = 136/283 (48.06%), Postives = 169/283 (59.72%), Query Frame = 1 Query: 4 SGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQ---------------------DVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVR------------------EAAAADLEAAT--AHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMK 729 S N++RL +LGHGA+G VYK VHA +L+LLAVKEV V DK +R QIGAE+R L A +VAF+DAFT G VSIVMEYC+GGSLQ D+ G L A++AS+A D +GL +H L +LHRDIKP+N+LLD G VKLADFGLVR E A +A+ AH+FVGTA+YMSPERL+GE Y S+DVWSLGLSLLTLA+G++PL +PK+NLYW+L+K Sbjct: 628 SANVIRLEELGHGATGCVYKAVHATSLQLLAVKEVAVHDKTRRDQIGAELRLLKH----CRDDAAAREEAEDKSKQEDPDGNPASLVAFYDAFTLTRSGYVSIVMEYCSGGSLQVGLGMASVLVLWSFVLLVVVLDLINREGPLKEASIASIALDMAQGLRYMHSLDMLHRDIKPANILLDREGRVKLADFGLVRSLNDRGMNSNANDDGGDAEEGAGGRQASRGRAHSFVGTAIYMSPERLQGEPYGPSADVWSLGLSLLTLAIGKYPLEIPKNNLYWNLVK 906
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: D8LFF4_ECTSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF4_ECTSI) HSP 1 Score: 215 bits (547), Expect = 5.770e-61 Identity = 129/251 (51.39%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 4 SGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVR------------------EAAAADLEAAT--AHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNV 696 S N++RL +LGHGA+G VYK VHA +L+LLAVKEVPV DK +R QIGAE+R L A +VAF+DAFT G VSIVMEYC+GGSLQD+ G L A++AS+A D +GL +H L +LHRDIKP+N+LLD G VKLADFGLVR E A A+ AH+FVGTA+YMSPERL+GE Y S+DVWSLGLSLLTLA+G++PL + Sbjct: 92 SANVIRLEELGHGATGCVYKAVHATSLQLLAVKEVPVHDKTRRDQIGAELRLLKH----CRADAAAREEEEDKNKQEDPDGNPASLVAFYDAFTLTRSGYVSIVMEYCSGGSLQDLINREGPLKEASIASIALDMAQGLRYMHSLNMLHRDIKPANILLDREGRVKLADFGLVRSLNDRGTNTNANDDGGDAEEGAGGRRASRGRAHSFVGTAIYMSPERLQGEPYGPSADVWSLGLSLLTLAIGKYPLEI 338
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7S1U8N0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N0_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.870e-56 Identity = 122/288 (42.36%), Postives = 169/288 (58.68%), Query Frame = 1 Query: 10 NIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKA--------LPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 +I+ LG+LG GASG VYK +H TL ++AVK V V +R+Q+ E+RAL + + V+ F+DAFT + AV IV+EY G+LQD+ A ++ LA+VA L+GLA +H L +HRDIKPSN+LL+ G +K++DFG+ RE +A TF GT +YMSPER+ +EYS++SD+WSLGL L+TLALGRFP++V YW +++A LPEN C DF+ L +DP +RP +LL HPFL Sbjct: 82 DIILLGELGRGASGTVYKAMHVPTLSIVAVKMVFVNQDEKRRQMVRELRALRA------------------LGKGLGAEGESSVIKFYDAFTDMERNAVCIVLEYMNAGTLQDLVNAQVPVNEHMLAAVASSVLKGLAQVHALKQIHRDIKPSNILLNRSGHIKISDFGVARELMETIEKA---QTFTGTVLYMSPERITAQEYSYASDIWSLGLCLVTLALGRFPISVTGGAGYWGIVQAIQDKPPPSLPENLFSEDLC--DFVALCLRKDPDQRPPAHELLEHPFL 346
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7S1G7U4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7U4_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.090e-56 Identity = 123/281 (43.77%), Postives = 160/281 (56.94%), Query Frame = 1 Query: 25 GDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAAT-LASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGM-----SPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 GDLG GASG V K VH TL+L+A+K V + D+ +RQ + E++ L + VV F+DA+T+ D G VSIVMEY GGSLQ + A G + LAS+A AL GLA +H +HRDIKP+N+L GAVKLADFG+ R+ A A A TFVGT +YM+PER+ E YS+ SD+WSLGLSLLT+A G FP + S YW L +A+ ++ A + S RDF+ L + P RP LL HPF+ Sbjct: 28 GDLGKGASGVVRKAVHLPTLQLVAIKHVRIHDREKRQLMVRELKTLYQNIVPIDARAPKATASPAPLPASPF------VVEFYDAYTAVDAGMVSIVMEYMNGGSLQGLVEARGPRPSEPQLASIAYQALEGLAFLHARHQIHRDIKPANLLCSRDGAVKLADFGIARQLADTW---AQAKTFVGTLIYMAPERIESEAYSYPSDIWSLGLSLLTIAHGEFPYST--SGGYWTLSRAIKDDPAPVVRPEFSDAFRDFVAQCLEKSPMARPRAIDLLDHPFV 297
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A2R5GP08_9STRA (Mitogen-activated protein kinase kinase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP08_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.220e-55 Identity = 119/306 (38.89%), Postives = 170/306 (55.56%), Query Frame = 1 Query: 13 IVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAG---------------------VVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPEN------AAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 ++RL LG GASG VY+ +H T L+AVK +P ++G+R+Q+ E++AL ++ G +VAFHDAF + G+V+IVMEY GGSLQDV +A G L+ V + RGL +H +HRDIKPSN+LL+ +G VK++DFG+VR+ + + +TFVGT VYMSPER+ GE YSF+SDVWSLGL+L+T ALG FP + YW ++ ++ + A SP D + L +DPA+RP+ ++L HPF+ Sbjct: 200 LIRLSILGRGASGVVYEMLHEPTFSLVAVKSIPCFEQGKRKQMIKELKALYANLVPIRTPGSATTRNASRPVSAGAQPRDRGDSMPEADTVAPAIEQGPACPYIVAFHDAFVNPQEGSVNIVMEYMDGGSLQDVVSAGGCDSEDVLSVVTENVARGLLFLHNRRQIHRDIKPSNLLLNGKGEVKISDFGIVRDVSE---DQTNVNTFVGTMVYMSPERINGEPYSFASDVWSLGLTLMTCALGAFPFR--EGGSYWDMLHSINNDPIPQLPADQFSPAFADLVNQCLQKDPAKRPTAAEILCHPFV 500
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A2R5GRK5_9STRA (Mitogen-activated protein kinase kinase 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRK5_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.430e-55 Identity = 122/285 (42.81%), Postives = 162/285 (56.84%), Query Frame = 1 Query: 13 IVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAG------MSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 +V + LG GA G VYK VH TLRL+AVK +PV D +R Q+ E++AL + +V FHDAF + + V++V+EY GGSLQD+ G + L+ +A LRGL IH +HRDIKPSN+L++ RG VK++DFG+VRE + A A TFVGT YMSPER+ G Y+ +SDVWS GLSL+++ALG +PL YW L+ +L E SP + DF+ L RDP +RPS EQLL HPF+ Sbjct: 197 LVMMAALGQGAGGIVYKAVHRPTLRLVAVKTIPVYDPTKRSQMLKELKALYENMAPIGYRDKAPLLDTSTPAPCPF------IVTFHDAFINPEMANVAMVVEYMDGGSLQDIIDGGGCENEDILSQIAYRVLRGLQFIHERHQIHRDIKPSNLLINHRGEVKISDFGIVRELESTQ---AMASTFVGTLTYMSPERISGLAYNANSDVWSFGLSLMSVALGTYPLATAGG--YWALLSSLNEGPVPRLPEDRFSPIMIDFVAQCLTRDPHQRPSCEQLLQHPFV 470
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7R9UB23_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB23_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.010e-54 Identity = 122/287 (42.51%), Postives = 163/287 (56.79%), Query Frame = 1 Query: 10 NIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNL--YWHLMKAL-----PENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 ++V LG LG G SG V+K +H TLRL+AVKE+PV + QRQQ+ E+ L + +V F+DAF + V+IV+EY GGSLQD+ A G D LAS+ LRGLA +H +HRDIKPSN+L++ G VK DFGL RE D A A TFVGT YMSPER+ G+ Y+ SSD+W+ GL+++ LALGRFP +++ YW ++ AL P+ S DF+ L++ P +RPS E+LL HPFL Sbjct: 404 SLVTLGLLGRGTSGTVHKALHVPTLRLVAVKEIPVFEATQRQQMVRELHTLYENLAPLDDSKGDTTPTRPSSKACPH------IVTFYDAFMTTSDCVVAIVVEYMDGGSLQDIVKAGGCQDEQILASIGFQMLRGLAFLHSRRKMHRDIKPSNVLINHLGDVKYCDFGLAREL---DNAVAEAETFVGTYPYMSPERIIGQPYTTSSDIWAFGLTMMALALGRFPYAGGATDVRDYWSMLHALTQAPVPKLGDDFSAAFSDFVSQCLNKAPEQRPSAEELLQHPFL 681
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: F0WJK7_9STRA (Serine/threonine protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJK7_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.840e-53 Identity = 116/284 (40.85%), Postives = 162/284 (57.04%), Query Frame = 1 Query: 16 VRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSP------CLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 ++L LG GASG V+K +H +L L+A+K++PV + +R Q+ EI+ L ++ +V +DAF + + G VSIV+EY GGSLQD+ + G LA++A+ LRGL+ +H LHRDIKPSN+L++ G VK++DFG+ RE + A A TFVGT YMSPER+ EEYS+ SDVWSLGLSLLT ALG FP + N YW L+ + + P RDF+ L ++ R +V+QLL HPF+ Sbjct: 102 IKLSVLGRGASGVVHKVIHLPSLMLVAIKDIPVYECAKRHQLITEIKTLYNNLSTLSDESTTKAPRTLAPCPE--------IVCLYDAFMNPNEGYVSIVVEYMDGGSLQDIVDSGGCKSERVLANIAQCVLRGLSHLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREM---EDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSLLTCALGEFPYS--SRNGYWELLHKIRNEPPPILPRGSFSVTFRDFMEKCLAKNEVERWNVKQLLDHPFI 372
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A024G2F5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2F5_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.540e-52 Identity = 117/284 (41.20%), Postives = 165/284 (58.10%), Query Frame = 1 Query: 16 VRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSP------CLRDFLRGTLHRDPARRPSVEQLLAHPFL 849 ++LG LG GASG V+K +H +L L+A+K++PV + +R Q+ AEI+ L + ++ +DA+ + + G VSIV+EY GGSLQD+ + G LA++AR L+GL+ +H LHRDIKPSN+L++ G VK++DFG+ RE + A A TFVGT YMSPER+ EEYS+ SDVWSLGLS+LT ALG+FP + N YW L+ + M P RDF+ L ++ A R +V+QLL HPF+ Sbjct: 591 LKLGVLGRGASGVVHKAIHLPSLMLVAIKDIPVYECAKRHQLIAEIKTLYDNLSTLSDDNTTKALRTLAPCPE--------ILCLYDAYMNPNEGYVSIVVEYMDGGSLQDIVDSGGCNSELVLANIARCVLKGLSYLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREM---EDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSILTCALGKFPYS--SKNGYWELLHKIRNEPPPMLPKDSFSNTFRDFMAKCLAKNEAERWTVQQLLLHPFV 861 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=849bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCCGGCAACATCGTGCGGCTCGGGGACCTCGGGCACGGCGCGTCCGGback to top protein sequence of jgi.p|Trimin1|144701 >Trimin1|144701|gw1.7.177.1 ID=Trimin1|144701|gw1.7.177.1|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=283bp MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEback to top mRNA from alignment at Contig_7:559014..560102+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1089bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_7:559014..560102+ >mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=849bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )back to top |