mRNA_2533 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144701
Unique NamemRNA_2533
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A835YL65_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL65_9STRA)

HSP 1 Score: 483 bits (1243), Expect = 4.140e-171
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
Query:    1 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL
Sbjct:    1 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 283          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A6H5K3B8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B8_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.910e-61
Identity = 136/283 (48.06%), Postives = 169/283 (59.72%), Query Frame = 1
Query:    4 SGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQ---------------------DVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVR------------------EAAAADLEAAT--AHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMK 729
            S N++RL +LGHGA+G VYK VHA +L+LLAVKEV V DK +R QIGAE+R L                              A +VAF+DAFT    G VSIVMEYC+GGSLQ                     D+    G L  A++AS+A D  +GL  +H L +LHRDIKP+N+LLD  G VKLADFGLVR                  E  A   +A+   AH+FVGTA+YMSPERL+GE Y  S+DVWSLGLSLLTLA+G++PL +PK+NLYW+L+K
Sbjct:  628 SANVIRLEELGHGATGCVYKAVHATSLQLLAVKEVAVHDKTRRDQIGAELRLLKH----CRDDAAAREEAEDKSKQEDPDGNPASLVAFYDAFTLTRSGYVSIVMEYCSGGSLQVGLGMASVLVLWSFVLLVVVLDLINREGPLKEASIASIALDMAQGLRYMHSLDMLHRDIKPANILLDREGRVKLADFGLVRSLNDRGMNSNANDDGGDAEEGAGGRQASRGRAHSFVGTAIYMSPERLQGEPYGPSADVWSLGLSLLTLAIGKYPLEIPKNNLYWNLVK 906          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: D8LFF4_ECTSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF4_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 5.770e-61
Identity = 129/251 (51.39%), Postives = 158/251 (62.95%), Query Frame = 1
Query:    4 SGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVR------------------EAAAADLEAAT--AHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNV 696
            S N++RL +LGHGA+G VYK VHA +L+LLAVKEVPV DK +R QIGAE+R L                              A +VAF+DAFT    G VSIVMEYC+GGSLQD+    G L  A++AS+A D  +GL  +H L +LHRDIKP+N+LLD  G VKLADFGLVR                  E  A    A+   AH+FVGTA+YMSPERL+GE Y  S+DVWSLGLSLLTLA+G++PL +
Sbjct:   92 SANVIRLEELGHGATGCVYKAVHATSLQLLAVKEVPVHDKTRRDQIGAELRLLKH----CRADAAAREEEEDKNKQEDPDGNPASLVAFYDAFTLTRSGYVSIVMEYCSGGSLQDLINREGPLKEASIASIALDMAQGLRYMHSLNMLHRDIKPANILLDREGRVKLADFGLVRSLNDRGTNTNANDDGGDAEEGAGGRRASRGRAHSFVGTAIYMSPERLQGEPYGPSADVWSLGLSLLTLAIGKYPLEI 338          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7S1U8N0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N0_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.870e-56
Identity = 122/288 (42.36%), Postives = 169/288 (58.68%), Query Frame = 1
Query:   10 NIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKA--------LPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            +I+ LG+LG GASG VYK +H  TL ++AVK V V    +R+Q+  E+RAL +                            + V+ F+DAFT  +  AV IV+EY   G+LQD+  A   ++   LA+VA   L+GLA +H L  +HRDIKPSN+LL+  G +K++DFG+ RE      +A    TF GT +YMSPER+  +EYS++SD+WSLGL L+TLALGRFP++V     YW +++A        LPEN      C  DF+   L +DP +RP   +LL HPFL
Sbjct:   82 DIILLGELGRGASGTVYKAMHVPTLSIVAVKMVFVNQDEKRRQMVRELRALRA------------------LGKGLGAEGESSVIKFYDAFTDMERNAVCIVLEYMNAGTLQDLVNAQVPVNEHMLAAVASSVLKGLAQVHALKQIHRDIKPSNILLNRSGHIKISDFGVARELMETIEKA---QTFTGTVLYMSPERITAQEYSYASDIWSLGLCLVTLALGRFPISVTGGAGYWGIVQAIQDKPPPSLPENLFSEDLC--DFVALCLRKDPDQRPPAHELLEHPFL 346          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7S1G7U4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7U4_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.090e-56
Identity = 123/281 (43.77%), Postives = 160/281 (56.94%), Query Frame = 1
Query:   25 GDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAAT-LASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGM-----SPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            GDLG GASG V K VH  TL+L+A+K V + D+ +RQ +  E++ L  +                             VV F+DA+T+ D G VSIVMEY  GGSLQ +  A G   +   LAS+A  AL GLA +H    +HRDIKP+N+L    GAVKLADFG+ R+ A      A A TFVGT +YM+PER+  E YS+ SD+WSLGLSLLT+A G FP +   S  YW L +A+ ++ A +     S   RDF+   L + P  RP    LL HPF+
Sbjct:   28 GDLGKGASGVVRKAVHLPTLQLVAIKHVRIHDREKRQLMVRELKTLYQNIVPIDARAPKATASPAPLPASPF------VVEFYDAYTAVDAGMVSIVMEYMNGGSLQGLVEARGPRPSEPQLASIAYQALEGLAFLHARHQIHRDIKPANLLCSRDGAVKLADFGIARQLADTW---AQAKTFVGTLIYMAPERIESEAYSYPSDIWSLGLSLLTIAHGEFPYST--SGGYWTLSRAIKDDPAPVVRPEFSDAFRDFVAQCLEKSPMARPRAIDLLDHPFV 297          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A2R5GP08_9STRA (Mitogen-activated protein kinase kinase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP08_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.220e-55
Identity = 119/306 (38.89%), Postives = 170/306 (55.56%), Query Frame = 1
Query:   13 IVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAG---------------------VVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPEN------AAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            ++RL  LG GASG VY+ +H  T  L+AVK +P  ++G+R+Q+  E++AL ++                            G                     +VAFHDAF +   G+V+IVMEY  GGSLQDV +A G      L+ V  +  RGL  +H    +HRDIKPSN+LL+ +G VK++DFG+VR+ +    +    +TFVGT VYMSPER+ GE YSF+SDVWSLGL+L+T ALG FP    +   YW ++ ++  +      A   SP   D +   L +DPA+RP+  ++L HPF+
Sbjct:  200 LIRLSILGRGASGVVYEMLHEPTFSLVAVKSIPCFEQGKRKQMIKELKALYANLVPIRTPGSATTRNASRPVSAGAQPRDRGDSMPEADTVAPAIEQGPACPYIVAFHDAFVNPQEGSVNIVMEYMDGGSLQDVVSAGGCDSEDVLSVVTENVARGLLFLHNRRQIHRDIKPSNLLLNGKGEVKISDFGIVRDVSE---DQTNVNTFVGTMVYMSPERINGEPYSFASDVWSLGLTLMTCALGAFPFR--EGGSYWDMLHSINNDPIPQLPADQFSPAFADLVNQCLQKDPAKRPTAAEILCHPFV 500          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A2R5GRK5_9STRA (Mitogen-activated protein kinase kinase 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRK5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.430e-55
Identity = 122/285 (42.81%), Postives = 162/285 (56.84%), Query Frame = 1
Query:   13 IVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAG------MSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            +V +  LG GA G VYK VH  TLRL+AVK +PV D  +R Q+  E++AL  +                             +V FHDAF + +   V++V+EY  GGSLQD+    G  +   L+ +A   LRGL  IH    +HRDIKPSN+L++ RG VK++DFG+VRE  +     A A TFVGT  YMSPER+ G  Y+ +SDVWS GLSL+++ALG +PL       YW L+ +L E           SP + DF+   L RDP +RPS EQLL HPF+
Sbjct:  197 LVMMAALGQGAGGIVYKAVHRPTLRLVAVKTIPVYDPTKRSQMLKELKALYENMAPIGYRDKAPLLDTSTPAPCPF------IVTFHDAFINPEMANVAMVVEYMDGGSLQDIIDGGGCENEDILSQIAYRVLRGLQFIHERHQIHRDIKPSNLLINHRGEVKISDFGIVRELESTQ---AMASTFVGTLTYMSPERISGLAYNANSDVWSFGLSLMSVALGTYPLATAGG--YWALLSSLNEGPVPRLPEDRFSPIMIDFVAQCLTRDPHQRPSCEQLLQHPFV 470          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A7R9UB23_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB23_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.010e-54
Identity = 122/287 (42.51%), Postives = 163/287 (56.79%), Query Frame = 1
Query:   10 NIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNL--YWHLMKAL-----PENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            ++V LG LG G SG V+K +H  TLRL+AVKE+PV +  QRQQ+  E+  L  +                             +V F+DAF +     V+IV+EY  GGSLQD+  A G  D   LAS+    LRGLA +H    +HRDIKPSN+L++  G VK  DFGL RE    D   A A TFVGT  YMSPER+ G+ Y+ SSD+W+ GL+++ LALGRFP     +++  YW ++ AL     P+     S    DF+   L++ P +RPS E+LL HPFL
Sbjct:  404 SLVTLGLLGRGTSGTVHKALHVPTLRLVAVKEIPVFEATQRQQMVRELHTLYENLAPLDDSKGDTTPTRPSSKACPH------IVTFYDAFMTTSDCVVAIVVEYMDGGSLQDIVKAGGCQDEQILASIGFQMLRGLAFLHSRRKMHRDIKPSNVLINHLGDVKYCDFGLAREL---DNAVAEAETFVGTYPYMSPERIIGQPYTTSSDIWAFGLTMMALALGRFPYAGGATDVRDYWSMLHALTQAPVPKLGDDFSAAFSDFVSQCLNKAPEQRPSAEELLQHPFL 681          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: F0WJK7_9STRA (Serine/threonine protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJK7_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.840e-53
Identity = 116/284 (40.85%), Postives = 162/284 (57.04%), Query Frame = 1
Query:   16 VRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSP------CLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            ++L  LG GASG V+K +H  +L L+A+K++PV +  +R Q+  EI+ L ++                             +V  +DAF + + G VSIV+EY  GGSLQD+  + G      LA++A+  LRGL+ +H    LHRDIKPSN+L++  G VK++DFG+ RE    +   A A TFVGT  YMSPER+  EEYS+ SDVWSLGLSLLT ALG FP +    N YW L+  +      + P        RDF+   L ++   R +V+QLL HPF+
Sbjct:  102 IKLSVLGRGASGVVHKVIHLPSLMLVAIKDIPVYECAKRHQLITEIKTLYNNLSTLSDESTTKAPRTLAPCPE--------IVCLYDAFMNPNEGYVSIVVEYMDGGSLQDIVDSGGCKSERVLANIAQCVLRGLSHLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREM---EDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSLLTCALGEFPYS--SRNGYWELLHKIRNEPPPILPRGSFSVTFRDFMEKCLAKNEVERWNVKQLLDHPFI 372          
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Match: A0A024G2F5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2F5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.540e-52
Identity = 117/284 (41.20%), Postives = 165/284 (58.10%), Query Frame = 1
Query:   16 VRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAAGMSP------CLRDFLRGTLHRDPARRPSVEQLLAHPFL 849
            ++LG LG GASG V+K +H  +L L+A+K++PV +  +R Q+ AEI+ L  +                             ++  +DA+ + + G VSIV+EY  GGSLQD+  + G      LA++AR  L+GL+ +H    LHRDIKPSN+L++  G VK++DFG+ RE    +   A A TFVGT  YMSPER+  EEYS+ SDVWSLGLS+LT ALG+FP +    N YW L+  +      M P        RDF+   L ++ A R +V+QLL HPF+
Sbjct:  591 LKLGVLGRGASGVVHKAIHLPSLMLVAIKDIPVYECAKRHQLIAEIKTLYDNLSTLSDDNTTKALRTLAPCPE--------ILCLYDAYMNPNEGYVSIVVEYMDGGSLQDIVDSGGCNSELVLANIARCVLKGLSYLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREM---EDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSILTCALGKFPYS--SKNGYWELLHKIRNEPPPMLPKDSFSNTFRDFMAKCLAKNEAERWTVQQLLLHPFV 861          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144701 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL65_9STRA4.140e-171100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A6H5K3B8_9PHAE1.910e-6148.06Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LFF4_ECTSI5.770e-6151.39Protein kinase domain-containing protein (Fragment... [more]
A0A7S1U8N0_9STRA1.870e-5642.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1G7U4_9STRA2.090e-5643.77Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GP08_9STRA1.220e-5538.89Mitogen-activated protein kinase kinase 1 n=1 Tax=... [more]
A0A2R5GRK5_9STRA1.430e-5542.81Mitogen-activated protein kinase kinase 3 n=1 Tax=... [more]
A0A7R9UB23_9STRA2.010e-5442.51Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
F0WJK7_9STRA3.840e-5340.85Serine/threonine protein kinase putative n=1 Tax=A... [more]
A0A024G2F5_9STRA1.540e-5241.20Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:559014..560102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144701|gw1.7.177.1
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko04131
KEGG ModuleM00683
KEGG Pathwayko04010,ko04214,ko04390,ko04391,ko04392,map04010,map04214,map04390,map04391,map04392
KEGG koko:K04412,ko:K08838,ko:K16288,ko:K17546
EC2.7.11.1
GOsGO:0007154,GO:0007165,GO:0007186,GO:0007212,GO:0008150,GO:0009987,GO:0023052,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007
Descriptionhippo signaling
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0574@1|root,KOG0574@2759|Eukaryota
Evalue9.46e-62
Seed ortholog2880.D8LFF4
Hectar predicted targeting categoryother localisation
TranscriptId145023
TrackFilteredModels1
ProteinId144701
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144701gene_2533Tribonema minus UTEX_B_3156 geneContig_7 559014..560102 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2533_1exon_2533_1Tribonema minus UTEX_B_3156 exonContig_7 559014..559541 +
exon_2533_2exon_2533_2Tribonema minus UTEX_B_3156 exonContig_7 559602..559807 +
exon_2533_3exon_2533_3Tribonema minus UTEX_B_3156 exonContig_7 559988..560102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2533CDS_2533Tribonema minus UTEX_B_3156 CDSContig_7 559014..559541 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144701Trimin1|144701|gw1.7.177.1Tribonema minus UTEX_B_3156 polypeptideContig_7 559014..560102 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=849bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCGGCAACATCGTGCGGCTCGGGGACCTCGGGCACGGCGCGTCCGG
CGCCGTCTACAAGGGCGTCCACGCGTGCACGCTGCGCCTGCTCGCCGTCA
AGGAGGTCCCCGTGCGCGACAAGGGGCAGCGGCAGCAGATCGGCGCGGAG
ATCCGTGCGCTGAGCTCGCACGCCGCCGCCGCCGCCGGCGCCGCCGCTGG
CGATGGCGCCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCCGCCGCCGC
CCGCCGGCGTCGTCGCCTTCCACGACGCCTTCACGTCCGCGGACGGCGGC
GCCGTGTCGATCGTCATGGAGTACTGCGCGGGCGGGTCGCTGCAGGACGT
CGCCGCCGCGGCGGGCGCGCTCGACGCGGCGACGCTCGCGTCCGTCGCGC
GCGACGCGCTGCGCGGCCTCGCCTCCATCCACCGCCTCGGCCTCCTCCAC
CGCGACATCAAACCGTCCAACATGCTCCTCGACGCGCGCGGCGCCGTCAA
GCTCGCGGACTTCGGGCTCGTGCGCGAGGCGGCGGCGGCGGACCTCGAGG
CGGCGACCGCGCACACGTTCGTCGGCACGGCCGTGTACATGTCGCCGGAG
CGGCTGCGCGGCGAGGAGTACTCGTTCAGCAGCGACGTGTGGAGCCTCGG
GCTGTCGCTGCTGACGCTCGCGCTCGGGCGCTTCCCCCTCAACGTCCCCA
AGAGCAACCTGTACTGGCACCTCATGAAGGCGCTCCCGGAAAATGCGGCG
GGGATGTCGCCGTGCCTGCGCGACTTCCTGCGCGGGACGCTGCACCGCGA
CCCCGCGCGCCGTCCGAGCGTCGAGCAGCTGCTCGCGCACCCCTTTCTC
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protein sequence of jgi.p|Trimin1|144701

>Trimin1|144701|gw1.7.177.1 ID=Trimin1|144701|gw1.7.177.1|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=283bp
MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAE
IRALSSHAAAAAGAAAGDGAAAAAAAAPPPPPPPAGVVAFHDAFTSADGG
AVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLH
RDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPE
RLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHLMKALPENAA
GMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL
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mRNA from alignment at Contig_7:559014..560102+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1089bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )
ATGTCCGGCAACATCGTGCGGCTCGGGGACCTCGGGCACGGCGCGTCCGG CGCCGTCTACAAGGGCGTCCACGCGTGCACGCTGCGCCTGCTCGCCGTCA AGGAGGTCCCCGTGCGCGACAAGGGGCAGCGGCAGCAGATCGGCGCGGAG ATCCGTGCGCTGAGCTCGCACGCCGCCGCCGCCGCCGGCGCCGCCGCTGG CGATGGCGCCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCCGCCGCCGC CCGCCGGCGTCGTCGCCTTCCACGACGCCTTCACGTCCGCGGACGGCGGC GCCGTGTCGATCGTCATGGAGTACTGCGCGGGCGGGTCGCTGCAGGACGT CGCCGCCGCGGCGGGCGCGCTCGACGCGGCGACGCTCGCGTCCGTCGCGC GCGACGCGCTGCGCGGCCTCGCCTCCATCCACCGCCTCGGCCTCCTCCAC CGCGACATCAAACCGTCCAACATGCTCCTCGACGCGCGCGGCGCCGTCAA GCTCGCGGACTTCGGGCTCGTGCGCGAGGTCGCGGCGGCGGCGCCGCGGG CGGCGGGCGGCGCGGCGGCGGCGGCGGCGGCGGCGGAGGCGGCGGCGGCG GACCTCGAGGCGGCGACCGCGCACACGTTCGTCGGCACGGCCGTGTACAT GTCGCCGGAGCGGCTGCGCGGCGAGGAGTACTCGTTCAGCAGCGACGTGT GGAGCCTCGGGCTGTCGCTGCTGACGCTCGCGCTCGGGCGCTTCCCCCTC AACGTCCCCAAGAGCAACCTGTACTGGCACCTCATGAAGGCGCTGTGCCT GCCCGACGCGCAGCCCGCGGCGCGCGGCGGCGGCAGCAGCGGCGGCGGCG GCGGCGGCGAAGCTGGCGGAGAACCCAGTGGCGGCAGCGGCGGCGGCGGT GGCGCCGAGAGCGCGACAGGTGGCGAGACCGCCGCTGCTTCCGCGCCAAC AGACGCTGCAGACCTGTTCCTGAGCCCGGAAAATGCGGCGGGGATGTCGC CGTGCCTGCGCGACTTCCTGCGCGGGACGCTGCACCGCGACCCCGCGCGC CGTCCGAGCGTCGAGCAGCTGCTCGCGCACCCCTTTCTC
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Coding sequence (CDS) from alignment at Contig_7:559014..560102+

>mRNA_2533 ID=mRNA_2533|Name=jgi.p|Trimin1|144701|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=849bp|location=Sequence derived from alignment at Contig_7:559014..560102+ (Tribonema minus UTEX_B_3156 )
ATGTCCGGCAACATCGTGCGGCTCGGGGACCTCGGGCACGGCGCGTCCGG
CGCCGTCTACAAGGGCGTCCACGCGTGCACGCTGCGCCTGCTCGCCGTCA
AGGAGGTCCCCGTGCGCGACAAGGGGCAGCGGCAGCAGATCGGCGCGGAG
ATCCGTGCGCTGAGCTCGCACGCCGCCGCCGCCGCCGGCGCCGCCGCTGG
CGATGGCGCCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCCGCCGCCGC
CCGCCGGCGTCGTCGCCTTCCACGACGCCTTCACGTCCGCGGACGGCGGC
GCCGTGTCGATCGTCATGGAGTACTGCGCGGGCGGGTCGCTGCAGGACGT
CGCCGCCGCGGCGGGCGCGCTCGACGCGGCGACGCTCGCGTCCGTCGCGC
GCGACGCGCTGCGCGGCCTCGCCTCCATCCACCGCCTCGGCCTCCTCCAC
CGCGACATCAAACCGTCCAACATGCTCCTCGACGCGCGCGGCGCCGTCAA
GCTCGCGGACTTCGGGCTCGTGCGCGAGGCGGCGGCGGCGGACCTCGAGG
CGGCGACCGCGCACACGTTCGTCGGCACGGCCGTGTACATGTCGCCGGAG
CGGCTGCGCGGCGAGGAGTACTCGTTCAGCAGCGACGTGTGGAGCCTCGG
GCTGTCGCTGCTGACGCTCGCGCTCGGGCGCTTCCCCCTCAACGTCCCCA
AGAGCAACCTGTACTGGCACCTCATGAAGGCGCTCCCGGAAAATGCGGCG
GGGATGTCGCCGTGCCTGCGCGACTTCCTGCGCGGGACGCTGCACCGCGA
CCCCGCGCGCCGTCCGAGCGTCGAGCAGCTGCTCGCGCACCCCTTTCTC
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