mRNA_2026 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163534
Unique NamemRNA_2026
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A835Z0H8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H8_9STRA)

HSP 1 Score: 344 bits (883), Expect = 2.950e-118
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 
Query:    1 MSYGAAEGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQRF 666
            MSYGAAEGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQRF
Sbjct:    1 MSYGAAEGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQRF 222
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A836CC59_9STRA (Chloroplast 29 kDa ribonucleoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC59_9STRA)

HSP 1 Score: 261 bits (668), Expect = 5.520e-86
Identity = 151/222 (68.02%), Postives = 169/222 (76.13%), Query Frame = 1 
Query:    1 MSYGAAEGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQRF 666
            MSYG+ EGCKLYVGNLGYDT +DTL  AF+ FG +QEASVA+DRETG SRGFGFVTY +P EAQAAMDNLN T+LDGRTIRVNLSQPR   +                              XXXXXXXXXXXXX   GNKLFIGNLGW+TTTD+L+ AF QYGQ+QDAIVMTDRETGSSRGFGFVTY  A +AQAAI+ +DG DFGGR+IRVNISEP+QR+
Sbjct:    1 MSYGS-EGCKLYVGNLGYDTNNDTLSQAFSQFGAVQEASVATDRETGSSRGFGFVTYGTPQEAQAAMDNLNNTQLDGRTIRVNLSQPRERAAG-----------------------------XXXXXXXXXXXXXASEGNKLFIGNLGWNTTTDDLHAAFGQYGQVQDAIVMTDRETGSSRGFGFVTYATADSAQAAIRALDGTDFGGRNIRVNISEPRQRY 192
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A836CBQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.660e-60
Identity = 119/217 (54.84%), Postives = 146/217 (67.28%), Query Frame = 1 
Query:   19 EGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGG---SSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQ 660
            +GCKLYVGNLGYDT +D L + FA +G I + +V +DR+TG SRGFGF+TYSS  EA AA DNL+G E+DGRTIRVN+S+PR      S GG XXXXXXXXXX                                 +KLF+GNLGW TT+++L QAF+QYG + DA V+TDRETG+SRGFGFVT+    AA+ AI GMDG +  GR IRVNIS+PK+
Sbjct:  178 DGCKLYVGNLGYDTTADQLESRFAEYGTISDLTVVTDRDTGNSRGFGFITYSSAAEAAAAADNLDGAEVDGRTIRVNISRPRAERNTFSEGGGXXXXXXXXXXDSAVD---------------------------SSKLFVGNLGWDTTSEDLQQAFAQYGDVVDAKVVTDRETGNSRGFGFVTFQSTEAAENAIGGMDGMELDGREIRVNISQPKK 367
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A0F7SR68_PHARH (Ps16 protein n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SR68_PHARH)

HSP 1 Score: 155 bits (392), Expect = 1.430e-43
Identity = 101/211 (47.87%), Postives = 129/211 (61.14%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQ 660
            KLYVGNL +    D+L   F P+G+IQ+  V  DRETG+SRGFGFVT+S   EAQAA+  LN  E++GR +R+NL+     G +GG              XXXXXXXXXXXXXXXX             G KL++GNL WS+    L Q FSQ+GQ+    V  DRETG SRGF F+T++    A AAI G++ ++  GR +RVN+S P Q
Sbjct:    4 KLYVGNLSWSFTDDSLAQTFQPYGSIQDCIVMKDRETGRSRGFGFVTFSQESEAQAAIQALNEQEIEGRQLRINLANGDRNGGAGGFGGASQGYQQQQSGXXXXXXXXXXXXXXXXGGDA---------GTKLYVGNLSWSSDEQSLSQTFSQFGQVTSVSVAKDRETGRSRGFAFITFSSQQEADAAINGLNDQEVEGRRLRVNMSNPPQ 205
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A8H6S255_9AGAR (Ps16 protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6S255_9AGAR)

HSP 1 Score: 153 bits (387), Expect = 9.270e-43
Identity = 95/210 (45.24%), Postives = 126/210 (60.00%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPK 657
            KLY+GNL +    D L+ AF P G I +  V  DRET +SRGFGFVTYS+  EA AA+  ++G +L GR+IRV+L+  +  G  G X           XXXXXXXXXX                     GNKL++GNL W+TT + L Q F ++G + D+I M DRETG  RGFGFVT++ A  AQ AI G++ ++  GR IRVN+++ K
Sbjct:    3 KLYIGNLSFKVDDDALYNAFHPHGQIVDHIVMKDRETQRSRGFGFVTYSTEDEANAALTQMDGQDLMGRSIRVSLANGKPSGGGGXXRGGYAGESYAGXXXXXXXXXXGSGWMLSTLKFPLILSAAMSSGNKLYVGNLSWNTTDEVLRQTFEEFGTVTDSIHMKDRETGRFRGFGFVTFSTADEAQNAIAGLNEQEVDGRRIRVNVAQGK 212
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A8H8JW91_9AGAM (RNA recognition motif protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JW91_9AGAM)

HSP 1 Score: 152 bits (383), Expect = 1.740e-41
Identity = 128/211 (60.66%), Postives = 150/211 (71.09%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFI-GNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPK 657
            K+YVGNL ++T  DTL  AF  FG + ++ V  DRETG+SRGFGFVTY +  EA  A+ ++N  ELDGR I+VN +  R GG  G XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       GNL W+T  D L Q FSQYG + D+IVM DRETG SRGFGFVTY   G A  AIQ  +  +  GR I+VN++  +
Sbjct:    4 KIYVGNLSWNTNDDTLRDAFGQFGQVLDSIVMRDRETGRSRGFGFVTYGTQQEADNAISSMNDQELDGRRIKVNGANQRSGGGGGXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLSWNTNDDTLRQVFSQYGNVLDSIVMRDRETGRSRGFGFVTYASEGEASGAIQTANNIELDGRQIKVNLANAR 214
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A8H8M5M6_9AGAM (RNA recognition motif protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8M5M6_9AGAM)

HSP 1 Score: 150 bits (379), Expect = 6.530e-41
Identity = 126/210 (60.00%), Postives = 149/210 (70.95%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPK 657
            K+YVGNL ++T  +TL  AF+ FG I ++ V  DRETG+SRGFGFVTY +  EA AA+ N+N  ELDGR I+VN +  R  G    XXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GNL W+T  D L Q FSQYG + D+IVM DRETG SRGFGFVTY   G A +AIQ  +  +  GR I+VN++  +
Sbjct:    4 KIYVGNLSWNTNDETLRQAFSEFGQILDSIVMRDRETGRSRGFGFVTYGTEQEADAAIQNMNDQELDGRRIKVNGANQR--GXXXXXXXXXXXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLSWNTNDDTLRQVFSQYGNVLDSIVMRDRETGRSRGFGFVTYATEGEAGSAIQKANNTELDGRQIKVNLANAR 211
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A484LRT8_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484LRT8_9ASTE)

HSP 1 Score: 140 bits (353), Expect = 5.020e-37
Identity = 81/218 (37.16%), Postives = 114/218 (52.29%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQP------RYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQR 663
            +L+VGNL +   S TL   F   GN++ A V  D+++G+SRGFGFVT S+  EA+AA+  LNG EL+GR +RVN   P       + GS GG                                            N+L++GNL W    + L   FS+ G++++A V+ DRE+G S+GFGFVTYT A     AI+ +DG D  GR IRV+++E + R
Sbjct:  119 RLFVGNLPFSVESATLANLFGEVGNVEVAEVIYDKQSGRSRGFGFVTMSTVEEAEAAVQQLNGYELEGRELRVNSGPPPPKRESSFRGSMGGGSGRYDNT------------------------------------NRLYVGNLSWGVDDEALENLFSEQGKVKEARVVYDRESGRSKGFGFVTYTSAEEVNNAIESLDGADLNGRPIRVSVAESRPR 300
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: A0A822ZB99_NELNU (Uncharacterized protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZB99_NELNU)

HSP 1 Score: 139 bits (350), Expect = 5.690e-37
Identity = 76/210 (36.19%), Postives = 112/210 (53.33%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPK 657
            + +VG L + T   +L  AF+P+G I E+ + +DRETG+SRGFGFVT+      + A++ +NG  LDGR I VN +Q R GG                                                 + F+G L WST    L +AFS YG+IQ++ +++DRETG SRGFGFVT+ D  + + AI+GM+G++  GR+I VN ++ +
Sbjct:    9 RCFVGGLAWATDDQSLERAFSPYGEILESKIINDRETGRSRGFGFVTFRDEQSMRDAIEGMNGQNLDGRNITVNQAQSRGGGG------------FSIPLFRSLFRHLLLFSLFLVQFRRVSAMASAEFEYRCFVGGLAWSTDDQSLERAFSAYGEIQESKIISDRETGRSRGFGFVTFRDEQSMRDAIEGMNGQNLDGRNITVNQAQSR 206
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BLAST of jgi.p|Trimin1|163534 vs. uniprot
Match: UPI001FB064D6 (29 kDa ribonucleoprotein A, chloroplastic-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB064D6)

HSP 1 Score: 139 bits (351), Expect = 5.730e-37
Identity = 80/212 (37.74%), Postives = 107/212 (50.47%), Query Frame = 1 
Query:   28 KLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSRGFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKLFIGNLGWSTTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQGMDGRDFGGRSIRVNISEPKQR 663
            KL+VGNL ++  S TL   F   GN++   V  D+ TG+SRGFGFVT S+P E +AA +  NG EL+GR +RVN   P   G S                                              N+L++GNL W      L   FS+ G++ +A V+ DRETG SRGFGFVTY+ A     AI+ ++G D  GR I+VN++E K R
Sbjct:   94 KLFVGNLPFNVDSATLAGLFEKVGNVEVVEVIYDKMTGRSRGFGFVTMSTPKEVEAAAEKFNGFELEGRPLRVNAGPPPPKGES-----------------------------PFRSPRSGGGGGSFGSNNRLYVGNLAWGVDESALETLFSEQGKVLEAKVVYDRETGRSRGFGFVTYSSAEEVNNAIESLNGADLNGRPIQVNVAESKPR 276
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163534 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0H8_9STRA2.950e-118100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC59_9STRA5.520e-8668.02Chloroplast 29 kDa ribonucleoprotein n=1 Tax=Tribo... [more]
A0A836CBQ9_9STRA1.660e-6054.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0F7SR68_PHARH1.430e-4347.87Ps16 protein n=1 Tax=Phaffia rhodozyma TaxID=26448... [more]
A0A8H6S255_9AGAR9.270e-4345.24Ps16 protein n=1 Tax=Mycena indigotica TaxID=21261... [more]
A0A8H8JW91_9AGAM1.740e-4160.66RNA recognition motif protein n=2 Tax=Ceratobasidi... [more]
A0A8H8M5M6_9AGAM6.530e-4160.00RNA recognition motif protein n=1 Tax=Ceratobasidi... [more]
A0A484LRT8_9ASTE5.020e-3737.16Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A822ZB99_NELNU5.690e-3736.19Uncharacterized protein n=2 Tax=Nelumbo nucifera T... [more]
UPI001FB064D65.730e-3737.7429 kDa ribonucleoprotein A, chloroplastic-like n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:1126834..1130442 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163534|e_gw1.26.140.1
BRITEko00000,ko00001,ko03009,ko03036
KEGG Pathwayko05130,map05130
KEGG koko:K11294
GOsGO:0001101,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008187,GO:0008266,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009631,GO:0009719,GO:0009725,GO:0009737,GO:0009892,GO:0009894,GO:0009895,GO:0009941,GO:0010033,GO:0010319,GO:0010468,GO:0010605,GO:0010608,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0033993,GO:0034357,GO:0042221,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043487,GO:0043489,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0055035,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:0097305,GO:1901363,GO:1901700,GO:1902369
Description29 kDa ribonucleoprotein
COG categoryA
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota,37NJY@33090|Viridiplantae,3G7EB@35493|Streptophyta,4JIQ1@91835|fabids
Evalue5.31e-36
Seed ortholog102107.XP_008243948.1
Hectar predicted targeting categoryother localisation
TranscriptId163856
TrackFilteredModels1
ProteinId163534
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163534gene_2026Tribonema minus UTEX_B_3156 geneContig_26 1126834..1130442 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2026_1exon_2026_1Tribonema minus UTEX_B_3156 exonContig_26 1126834..1126882 +
exon_2026_2exon_2026_2Tribonema minus UTEX_B_3156 exonContig_26 1127574..1127786 +
exon_2026_3exon_2026_3Tribonema minus UTEX_B_3156 exonContig_26 1130036..1130442 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2026CDS_2026Tribonema minus UTEX_B_3156 CDSContig_26 1126834..1126882 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163534Trimin1|163534|e_gw1.26.140.1Tribonema minus UTEX_B_3156 polypeptideContig_26 1126834..1130442 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2026 ID=mRNA_2026|Name=jgi.p|Trimin1|163534|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=669bp|location=Sequence derived from alignment at Contig_26:1126834..1130442+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCTACGGTGCTGCAGAGGGCTGTAAGCTCTACGTTGGCAACCTTGG
GTATGACACGCGGTCGGACACCCTGCACGCGGCCTTTGCGCCCTTTGGCA
ACATCCAGGAGGCGTCCGTCGCATCGGACCGCGAGACGGGGCAGTCTCGC
GGCTTCGGCTTCGTGACGTATTCTTCGCCCATGGAGGCGCAGGCTGCCAT
GGACAACCTGAACGGCACAGAACTGGACGGCCGCACCATCCGCGTGAACC
TGTCGCAGCCCCGCTACGGTGGCAGCAGCGGCGGCTACGGTGGCTCCAGC
GGCGGCGCTGGCGGCTACGGTGGCTCCAGCGGTGGCTATGGTGGCGGTGC
CGCTGCCGGGGGCTATGGCGGAGGTGGTGGTGGCTTCGGCGGCGGCGGCC
GTGGCGGTGGCGACGGCAACAAGCTGTTCATTGGCAACCTCGGCTGGAGC
ACCACCACCGACGAGCTCTACCAGGCGTTCTCGCAGTATGGCCAGATACA
GGACGCCATTGTGATGACGGACCGGGAGACGGGCAGCTCGCGCGGGTTTG
GGTTTGTGACCTACACGGATGCTGGAGCCGCGCAAGCCGCTATCCAGGGC
ATGGACGGCCGCGACTTCGGCGGCCGCTCGATCCGCGTCAACATCTCTGA
GCCGAAGCAGCGCTTCTAG
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protein sequence of jgi.p|Trimin1|163534

>Trimin1|163534|e_gw1.26.140.1 ID=Trimin1|163534|e_gw1.26.140.1|Name=jgi.p|Trimin1|163534|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=223bp
MSYGAAEGCKLYVGNLGYDTRSDTLHAAFAPFGNIQEASVASDRETGQSR
GFGFVTYSSPMEAQAAMDNLNGTELDGRTIRVNLSQPRYGGSSGGYGGSS
GGAGGYGGSSGGYGGGAAAGGYGGGGGGFGGGGRGGGDGNKLFIGNLGWS
TTTDELYQAFSQYGQIQDAIVMTDRETGSSRGFGFVTYTDAGAAQAAIQG
MDGRDFGGRSIRVNISEPKQRF*
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mRNA from alignment at Contig_26:1126834..1130442+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2026 ID=mRNA_2026|Name=jgi.p|Trimin1|163534|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3609bp|location=Sequence derived from alignment at Contig_26:1126834..1130442+ (Tribonema minus UTEX_B_3156 )
ATGAGCTACGGTGCTGCAGAGGGCTGTAAGCTCTACGTTGGCAACCTTGG
TGAGTGAGGTAGCACTGCGAGCCCCTTTCGGGTGCGCGCGTGCGTAGCTT
TTTTGGCTGGGATCGTCGGCCCTCCAGCGTGCTGGCGTGGCGTGCACTGC
CGGTGATCGGCACCATGCTCTCCAGCTTGGTCGTGATTTGAGTGTGTGCA
TCGTGTCTTATGATGTGTCCGAACGACAGAAGAAGCCGCCCCTCCCTTGC
AGTTGTGCTTCACACAAAGCTATCAGGTAGGTCATCATCGATGACAAAGT
GACTGTGGGATTGTGGTGATTTCTCTAGCAATGACTTTGGAGCCAGCTTC
TGCAGCGCATTACGTGCTGCATAAGTCTGCAAGCTTGCGTGTGAGTGGTG
TGTTTCAACTCTACAAGAGTAATGTGCAGCTGTGTGTTGCTCGCTTAATC
TGCATTCTCTCACTTCATTTCATGACTTCATGTCTTCAGTGCATCATGTT
CTGACGATTTGACCCATTTTTCCCACTTGCTTTACGGCATCTTCCAGCAC
AGCGCCCGCCTGATATATATACTGTGACAAATCCAGCATCACCTGCGTCT
TCTTAGTTGATTATGTGCTTGGTGATGCTTCCGATCTCTGCCGTACATTG
ACAATGCTTACTGTTCTGGTGATGCTCCAGATCTCTGCCGCACATTGACA
ACGCTTACTGTTCTCCTCCACGCGCCTGCCGCATTATCAGGGTATGACAC
GCGGTCGGACACCCTGCACGCGGCCTTTGCGCCCTTTGGCAACATCCAGG
AGGCGTCCGTCGCATCGGACCGCGAGACGGGGCAGTCTCGCGGCTTCGGC
TTCGTGACGTATTCTTCGCCCATGGAGGCGCAGGCTGCCATGGACAACCT
GAACGGCACAGAACTGGACGGCCGCACCATCCGCGTGAACCTGTCGCAGC
CCCGTGAGCCGCGTGCTGGCGGCGGCGGCGGGTATGGCGGCGGCGGCGCC
GGCGGCGGCTATGGTGGCGGTACAGGCGGCTATGGCGCCAGTAGCGGTGG
CTATGGCGGCGGCGGCAGCAGTGGCTACGGTGGCGGCGGCAGCGGCGGTG
AGTCAACAACTGTGTCTGGGCACACCAGTGTTGTGCAAGACCAGTTCTGC
GATGCTGTGCAGTACCATGTGCGCGCATAACATGTATGAAAACGAATCAA
AAGATGGTAGTATAGAAACGAATCAAAAGATGTATACGTGCAGACCATTC
AGGTACACAGGTCACTGCAGGCCTGCAAACTACTTTACACCTTACTGCTG
CAATCCGCGCAGACGCATGTGAATTGAAGTCCTCCAGACCTTGCTGCTGC
AATCTGCGCAGATGCATGTGAGTTGAGCGCACTTGCAATGCAATTTGCAG
CACTTTATGAGGTCCACTCCGCTTTGTAAGGGTCGATGAGTTGCTGCTGC
TGTGTGCCTTTTGCGATTGCAGTGCTACTGCAGGCAGGCAATTAGAGCAA
ACCCTCTTGCGTCAGAAACACTTCTCATGTGCTGCCGTGCGGAATGTTTT
GCATGTGATACGCTAGGCTACGACCGTGGTGGGTACGGTGATCGTGGTGG
GTATGGTGATCGCGGCGGATACGGCGATGGCGGCTTGCGCGGTGAAAATA
GTGGATACGCCGATTCTGGTGGTAAGTATGTATGCACCGCAAGCGCTCAG
TACACGGTTGCTTACAAGTTCGGTTGACAGCACAGACCTAAGGGAGATTG
CGCTGCTTACAGATGTTCACGCAACGGCAGGCAGATGAAGTCGCAGTCAG
GGACGCGCATCCTTCAAGCCTCTGTACTGCTCACTGCCCATTATACCTGG
AAATGATGAGCTTTTGAACTTCAGACAAATGCTTCAGGCCCAACATTTGG
CATTTGTGTCTGTTGCACCTCACACTTCCATGCATGTATGGTATTCGTTT
CCCACAGGCTATGGTGGCGGCGGTGGCGGCTACGGTGGTGGCGGGGGTGC
AGGTGGCTACGGCAGTGGTGGGTATGGCGGCAGCAGTGGTGGTGAGTGGT
TTCCTCCTTGTGCTTGCTGTGCTGCTGCATTGTGCCAACTGTTCTGCATC
ACCGGTTTCATTCGACGTGTCAGCTAGAACAGAAGCGCGATGCAGTTTTC
ACCGGGGATGAAGCCTGTGTTTGCATTGGATTTGTGGTGGGACAGCGCTG
GTGAGCTACGATGTTGCATCTCGCGCTCTGACCAGATACTTGGACCAAGC
GGGGGAGGCTGCAATTGATCACAGCCTTGGCATCTGAGGCTTGTTGGTGT
TCATTTATGACCATACTAGTTGGACACAGCAGCATCCACTGGCGATGGTC
GCGTGCGCCAACCATTGTTGTTAATTACGGCGCATGGTAGTCACTTACGT
GCAATCACATTTGTCACTCTGTAGGACCTGCTTGCGGCATCTACGGCTAT
GGCCAAGTTCAAGCATCTTTTGTTGCTTCAACACCTTTCAACTTCAAGGG
TGTGTAACTTCAACTTATGTTTTTTTGCGCCATTGCGCTACAGTAGCTTG
TCTGCTATCGGCATCGGCATAATAAAATCATCATCTGGCATGCGTATACT
GTGAGTGGAGCTGCTGCTGGTGTGGAGCAGTGATGGGGACTTTTAAGACA
GGTGTGCAAGCACCGAACTCAGAGGTGGCCTGCGCCGCGCTAAGGTGGCT
TGCATCAACTGTTATATGTATATATCCCCTTGCACAAAGCATTCATAGTT
CTATATACTTTTCAGACCAGCCATGATGATGATTGCCCTTCGTGCAGAGG
TGCGCAGACCTGTCTGTGTGAGGTTGAACTGTCAATGCAATCTGCCCTCG
GCCATGCTCAATTACCATGTCACCTGTTACTACTGCTAAGCGCATTGTAC
ATGAATGCATTGTGCATGCAGAATTGCGTTTCCCAGTATCTTATGCTGAC
CAGAGAGCACCGGAATGGCAACAAAAAATGGTGTCGAAGTACGTCAAAGC
TCAACTTGATGTAGCCATTTGCCGCAATTTAGGAATTTGCAACGACTCAC
TTACCTACTTACTCTGATGTAATTTGGCGTCATGACGTCATCCACACCCT
GGCGCCAACAGCCTCTCTGCGGTGCACATCTCACAACGATATTGCCTTGC
TGCAGCAGGGGGTTTCACAATTGTCACGCCCATCTTATGGATGCATGCGC
AGGCTACGGTGGCAGCAGCGGCGGCTACGGTGGCTCCAGCGGCGGCGCTG
GCGGCTACGGTGGCTCCAGCGGTGGCTATGGTGGCGGTGCCGCTGCCGGG
GGCTATGGCGGAGGTGGTGGTGGCTTCGGCGGCGGCGGCCGTGGCGGTGG
CGACGGCAACAAGCTGTTCATTGGCAACCTCGGCTGGAGCACCACCACCG
ACGAGCTCTACCAGGCGTTCTCGCAGTATGGCCAGATACAGGACGCCATT
GTGATGACGGACCGGGAGACGGGCAGCTCGCGCGGGTTTGGGTTTGTGAC
CTACACGGATGCTGGAGCCGCGCAAGCCGCTATCCAGGGCATGGACGGCC
GCGACTTCGGCGGCCGCTCGATCCGCGTCAACATCTCTGAGCCGAAGCAG
CGCTTCTAG
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Coding sequence (CDS) from alignment at Contig_26:1126834..1130442+

>mRNA_2026 ID=mRNA_2026|Name=jgi.p|Trimin1|163534|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=669bp|location=Sequence derived from alignment at Contig_26:1126834..1130442+ (Tribonema minus UTEX_B_3156 )
ATGAGCTACGGTGCTGCAGAGGGCTGTAAGCTCTACGTTGGCAACCTTGG
GTATGACACGCGGTCGGACACCCTGCACGCGGCCTTTGCGCCCTTTGGCA
ACATCCAGGAGGCGTCCGTCGCATCGGACCGCGAGACGGGGCAGTCTCGC
GGCTTCGGCTTCGTGACGTATTCTTCGCCCATGGAGGCGCAGGCTGCCAT
GGACAACCTGAACGGCACAGAACTGGACGGCCGCACCATCCGCGTGAACC
TGTCGCAGCCCCGCTACGGTGGCAGCAGCGGCGGCTACGGTGGCTCCAGC
GGCGGCGCTGGCGGCTACGGTGGCTCCAGCGGTGGCTATGGTGGCGGTGC
CGCTGCCGGGGGCTATGGCGGAGGTGGTGGTGGCTTCGGCGGCGGCGGCC
GTGGCGGTGGCGACGGCAACAAGCTGTTCATTGGCAACCTCGGCTGGAGC
ACCACCACCGACGAGCTCTACCAGGCGTTCTCGCAGTATGGCCAGATACA
GGACGCCATTGTGATGACGGACCGGGAGACGGGCAGCTCGCGCGGGTTTG
GGTTTGTGACCTACACGGATGCTGGAGCCGCGCAAGCCGCTATCCAGGGC
ATGGACGGCCGCGACTTCGGCGGCCGCTCGATCCGCGTCAACATCTCTGA
GCCGAAGCAGCGCTTCTAG
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