mRNA_1859 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A835YYA9_9STRA (Putative nuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA9_9STRA) HSP 1 Score: 310 bits (793), Expect = 7.940e-107 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1 Query: 1 MRLRKLSNLISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPWLNK 456 MRLRKLSNLISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPWLNK Sbjct: 1 MRLRKLSNLISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPWLNK 152
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A836CPX4_9STRA (Putative nuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPX4_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.030e-70 Identity = 106/148 (71.62%), Postives = 124/148 (83.78%), Query Frame = 1 Query: 1 MRLRKLSNLISRA-GSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKS 441 M LRKLS L+ + W +VTYD+C+KYLPAHDGD+AKV+RVIDGDTVHLALK+NG F R+ CRL GID AE+ SKD EK L E+AKS+LA ACDNKLVTLSNV LEKYGRLLADLTV G++VTLSQVML +P++CHAYDGGKK+ Sbjct: 1 MLLRKLSALVCGSHNGIDWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKT 148
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A835Z7E9_9STRA (FirrV-1-P2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E9_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.230e-35 Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 46 TTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPW 447 T + +TY++C ++L +GD K+V+V DGDTV A NG + CRL GID ELHS + HEKAL KA+ L+A NK+VT+ + LEKYGR+L DL V+G + M+ + DVC+AYDGG K W Sbjct: 2 TELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSAC--DEMMALHDVCYAYDGGSKKQW 133
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0FAJ1_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAJ1_9ZZZZ) HSP 1 Score: 94.7 bits (234), Expect = 1.140e-21 Identity = 57/140 (40.71%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 52 WDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFT---RIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKK-SP--WLN 453 W +V+Y T + + P AKVV+V DGDT+ +A T + R RL GID E+ +KD EK G+KA+ I+ NK+V +SN+ +KYGR+LAD++++G NVT + + + V Y+GGKK SP WL+ Sbjct: 15 WSDVSYKTTEVFRPVFSK--AKVVKVYDGDTITVATPLQFTGSPVYRFSVRLRGIDCPEIRTKDADEKVCGQKARKIMLDQVMNKVVDVSNIDYDKYGRILADVSIDGVNVTEALITQNLAVV---YNGGKKNSPENWLD 149
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0LVU8_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LVU8_9ZZZZ) HSP 1 Score: 80.9 bits (198), Expect = 2.490e-16 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 61 VTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKK 438 + Y ++P G KV++V DGDT+ +A K N + R R++GID E+ K E+EK A+ + + K+V L NV LEKYGR+LAD+ +EG N+ S + ++ +YDGGKK Sbjct: 30 IKYKETIPFIPPVTG--GKVIKVYDGDTITIASKMPWDNSPYYRFSVRINGIDCPEIKGKTENEKQCAILAREHVDHLVNGKIVHLENVSLEKYGRILADVFIEGVNIGQSLLEKRL---AVSYDGGKK 153
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0HI73_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HI73_9ZZZZ) HSP 1 Score: 77.8 bits (190), Expect = 3.580e-15 Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 16 LSNLISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSP--WL 450 +SN S + N++YD ++P KV++V DGDT+ +A + S RI RL+GID E+ + + EK L +K + L NK+V L N EKYGRLLAD+ ++G V +++ M++ + G K P W+ Sbjct: 18 ISNTSIAVQSDDFTNISYDNTVPFVPPVT--YGKVIKVYDGDTITIAARLPYSKSAIYRIAVRLNGIDTPEIKGQTQKEKDLAKKIRDTLQTKLMNKIVQLKNTSSEKYGRLLADVYLDG--VCINEWMVEQGYAVRYHGGTKIRPTEWI 163
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0AUH4_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AUH4_9ZZZZ) HSP 1 Score: 77.0 bits (188), Expect = 4.060e-15 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 43 STTWDNV----TYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPW 447 S WD++ Y C K KVV V DGDTV NG + CRL G+D E+ + ++ EKA G + +L NK+V + L+KYGRLL + ++G NV +Q ++ + AYDGG K W Sbjct: 2 SIEWDSIHDAPDYSDCVKGTTVE----GKVVSVYDGDTVKTIFPLNGVLYKWNCRLTGVDTPEIRTSNKKEKAFGYVVRDLLREKILNKVVQVKCDDLDKYGRLLTVIYIDGVNV--NQWLID-NEYAFAYDGGTKRSW 133
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0IJ23_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IJ23_9ZZZZ) HSP 1 Score: 73.6 bits (179), Expect = 1.400e-13 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 55 DNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKK 438 D + YD C +++P + AKVV+V DGDT+ +A K R RL GIDA EL+S + +E+ +++ L N+ V+L NV +EKYGRLLAD+ +V L + Y GGKK Sbjct: 29 DTIKYDDCARFIP--EIRYAKVVKVYDGDTITVACKYPIRGKQLYRFSVRLAGIDAPELNSNNSNERIHANVSRTNLQGLIFNETVSLENVRIEKYGRLLADVYFHDLHVN---AWLLDNEYAIPYYGGKK 154
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0IRR9_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IRR9_9ZZZZ) HSP 1 Score: 73.6 bits (179), Expect = 1.880e-13 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 118 VVRVIDGDTVHLALKS--NGT-FTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKK 438 V++V DGDT+ +A K NG+ R RL+GIDA E+ +K EK L A+ L+ K ++L N+ +EKYGR+LAD+ ++G N +S+ ML+ + YDGG K Sbjct: 58 VIKVYDGDTITIASKLPYNGSPLYRFSVRLNGIDAPEIRAKITEEKKLAIIARDTLSNQIMGKTISLENIAVEKYGRILADVIIDGQN--MSEYMLE-QKLAVKYDGGTK 164
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Match: A0A6C0CPC4_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CPC4_9ZZZZ) HSP 1 Score: 72.4 bits (176), Expect = 3.180e-13 Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 115 KVVRVIDGDTVHLA--LKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKK 438 +V++V DGDT+ + +K++ T + RL+ ID E+ +KD EK + KA+ +A K+VTL NVGL+KYGRLLA + + G S+++ + ++ +YDGG K Sbjct: 31 RVIKVYDGDTITILGRVKNSSTLYKFSVRLNRIDCPEMRTKDLKEKFVATKARDFVAELTLQKIVTLKNVGLDKYGRLLAHVYI-GKRCINSELIER--NLAVSYDGGTK 137 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163482 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1859 ID=mRNA_1859|Name=jgi.p|Trimin1|163482|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=459bp|location=Sequence derived from alignment at Contig_26:328321..328779+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGATTACGCAAATTGAGCAACTTGATCTCCCGAGCCGGCAGCACCACback to top protein sequence of jgi.p|Trimin1|163482 >Trimin1|163482|e_gw1.26.5.1 ID=Trimin1|163482|e_gw1.26.5.1|Name=jgi.p|Trimin1|163482|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=153bp MRLRKLSNLISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHback to top mRNA from alignment at Contig_26:328321..328779+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1859 ID=mRNA_1859|Name=jgi.p|Trimin1|163482|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=459bp|location=Sequence derived from alignment at Contig_26:328321..328779+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:328321..328779+ >mRNA_1859 ID=mRNA_1859|Name=jgi.p|Trimin1|163482|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=459bp|location=Sequence derived from alignment at Contig_26:328321..328779+ (Tribonema minus UTEX_B_3156 )back to top |