mRNA_18436 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354308
Unique Name	mRNA_18436
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354308 vs. uniprot
Match: A0A835Z246_9STRA (PX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z246_9STRA)

HSP 1 Score: 622 bits (1605), Expect = 1.570e-215
Identity = 568/568 (100.00%), Postives = 568/568 (100.00%), Query Frame = 1

Query:    1 MGLVLSTLGLGLTWAVCLSLVLAVAAVLQLPDNVVREGIRPGLAGARAWALLRLLVSELPPPHSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHSQTAKQAHRRARLQFLEGLSAAVHEPRIVDAQFVSYKVELALPLRRTLAAVRVGDARGAXXXXXXXXXXXXGARQDVAQWAVWRRITDFAVLRAALLKAEANHGGXXXXXXXXXXXXXXXNSAVSLPVLPHSLRRTFEPDHLAKRAARLHRFMEVVLQDPLMRTSQDLFDFITPREWDAALPQTSTPTQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETPVASPRLGLRDLERASEQSSIALGEQSQSDCPLGARLAAARASFAARSLDSGATVTSVTLLAVIPNHTSRIXXXXXXXXXXXXXXXXXXXSRGARQIKANMNTGSLHFKPAAAAATGASLKLAAVAKLSGLKRESAPPRPQSDGHGALGGADAQL 1704
            MGLVLSTLGLGLTWAVCLSLVLAVAAVLQLPDNVVREGIRPGLAGARAWALLRLLVSELPPPHSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHSQTAKQAHRRARLQFLEGLSAAVHEPRIVDAQFVSYKVELALPLRRTLAAVRVGDARGAXXXXXXXXXXXXGARQDVAQWAVWRRITDFAVLRAALLKAEANHGGXXXXXXXXXXXXXXXNSAVSLPVLPHSLRRTFEPDHLAKRAARLHRFMEVVLQDPLMRTSQDLFDFITPREWDAALPQTSTPTQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETPVASPRLGLRDLERASEQSSIALGEQSQSDCPLGARLAAARASFAARSLDSGATVTSVTLLAVIPNHTSRIXXXXXXXXXXXXXXXXXXXSRGARQIKANMNTGSLHFKPAAAAATGASLKLAAVAKLSGLKRESAPPRPQSDGHGALGGADAQL
Sbjct:    1 MGLVLSTLGLGLTWAVCLSLVLAVAAVLQLPDNVVREGIRPGLAGARAWALLRLLVSELPPPHSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHSQTAKQAHRRARLQFLEGLSAAVHEPRIVDAQFVSYKVELALPLRRTLAAVRVGDARGAXXXXXXXXXXXXGARQDVAQWAVWRRITDFAVLRAALLKAEANHGGXXXXXXXXXXXXXXXNSAVSLPVLPHSLRRTFEPDHLAKRAARLHRFMEVVLQDPLMRTSQDLFDFITPREWDAALPQTSTPTQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETPVASPRLGLRDLERASEQSSIALGEQSQSDCPLGARLAAARASFAARSLDSGATVTSVTLLAVIPNHTSRIXXXXXXXXXXXXXXXXXXXSRGARQIKANMNTGSLHFKPAAAAATGASLKLAAVAKLSGLKRESAPPRPQSDGHGALGGADAQL 568

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354308 vs. uniprot

BLAST of jgi.p|Trimin1|354308 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z246_9STRA	1.570e-215	100.00	PX domain-containing protein n=1 Tax=Tribonema min...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_229	contig	Contig_229:118024..127489 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354308\|estExt_Genemark1.C_Ctg_2290012
Hectar predicted targeting category	signal peptide
TranscriptId	354630
Track	FilteredModels1
ProteinId	354308

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354308	gene_18436	Tribonema minus UTEX_B_3156	gene	Contig_229 118024..127489 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354308	Trimin1\|354308\|estExt_Genemark1.C_Ctg_2290012	Tribonema minus UTEX_B_3156	polypeptide	Contig_229 118024..127216 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18436_1	exon_18436_1	Tribonema minus UTEX_B_3156	exon	Contig_229 118024..118163 +
exon_18436_2	exon_18436_2	Tribonema minus UTEX_B_3156	exon	Contig_229 119503..119833 +
exon_18436_3	exon_18436_3	Tribonema minus UTEX_B_3156	exon	Contig_229 120836..121107 +
exon_18436_4	exon_18436_4	Tribonema minus UTEX_B_3156	exon	Contig_229 122590..122773 +
exon_18436_5	exon_18436_5	Tribonema minus UTEX_B_3156	exon	Contig_229 124001..124415 +
exon_18436_6	exon_18436_6	Tribonema minus UTEX_B_3156	exon	Contig_229 126708..126807 +
exon_18436_7	exon_18436_7	Tribonema minus UTEX_B_3156	exon	Contig_229 126952..127489 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18436	CDS_18436	Tribonema minus UTEX_B_3156	CDS	Contig_229 118024..118163 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_18436	UTR3_18436	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_229 127217..127489 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_229:118024..127489+
coding sequence from alignment at Contig_229:118024..127489+

spliced messenger RNA

>mRNA_18436 ID=mRNA_18436|Name=jgi.p|Trimin1|354308|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1980bp|location=Sequence derived from alignment at Contig_229:118024..127489+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCTGGTCCTTTCTACGCTGGGCCTGGGCCTTACCTGGGCGGTGTG
CTTGAGCCTTGTGCTGGCGGTTGCAGCTGTGCTACAGCTCCCCGACAATG
TTGTCAGAGAAGGCATACGACCAGGGCTTGCAGGCGCCAGGGCCTGGGCG
CTGCTGCGGCTCCTGGTGTCGGAATTGCCGCCCCCCCACAGTCCCGCCAG
CAAGCGCGGGGGCGCCCCAGCTTCCTCCTCATCACTGACAGTTACGGCAG
TTACGGCGCGGCAGCAGCGCTCGCCGTCCCCTCGCGCAGCAGCAGCAGCT
GCAGCAGCGGCATCAGTGCTCAGCGCAGCTAGTGGGGATGATCCTGCGGG
GGGAGTGGCAGTGGCGACGGTGAAGCCTGCGGCAGCGGCGGCGGCGGCGG
CGGCGGCGGCGGGAGGGGGACGAACGCTGCTGCCTGCCGCCATGGCAGCA
GCGGGCGGGAGGCACTCGCAGACGGCGAAGCAAGCGCACAGGCGAGCGCG
GCTTCAATTTCTGGAGGGCCTGAGCGCTGCTGTTCACGAACCGCGCATCG
TCGACGCGCAGTTTGTCAGTTACAAAGTGGAACTGGCGCTGCCGCTGCGC
CGAACGTTGGCGGCGGTGCGTGTGGGGGATGCAAGGGGGGCGGGGGCGGG
GGCAGGGGTAGGGGGGGAGGGGGAGGGGGGGGCGCGGCAGGACGTGGCGC
AGTGGGCGGTGTGGCGGCGGATCACTGACTTTGCAGTGCTCAGGGCTGCC
CTGCTGAAAGCGGAGGCTAATCACGGCGGCGGCGGCGGCAGCGGCACTGG
CAGCAGCGGCGGCGGCGGCGGCGGCAACAGCGCAGTGTCCCTGCCTGTGC
TGCCGCACTCACTCAGGCGGACATTTGAGCCTGATCACCTGGCGAAGCGC
GCGGCACGGCTGCACCGCTTCATGGAGGTGGTCCTCCAGGACCCTCTCAT
GCGCACGTCCCAAGACCTCTTCGACTTCATCACGCCGCGCGAGTGGGACG
CGGCGCTGCCACAAACTTCAACTCCAACCCAAACTACAACTTCAACAACG
CCCGCGCAGCACCGCCGCAGCAGCTCCCTGGCTGCAGCGGCAGCGGCAAT
GGCATCAGCAGCGGACCGCAGCACTGCTCAGCAATCATCCCTGGCCAATC
AGAATACCAGGGCGGTAGCGGCGGCGCCAGCATCAGCGGCGGCGGCGGCG
GCGGCGCTTGACGATGTGAGCAGTGGCGGCGGGGAGACCCCGGTGGCTTC
TCCGAGGCTCGGTCTTCGGGACCTGGAACGCGCCTCAGAACAGTCTTCGA
TCGCGCTGGGGGAGCAGTCGCAGTCAGACTGCCCGCTGGGAGCGCGTCTG
GCGGCGGCGCGCGCGTCCTTCGCCGCGCGCTCCCTCGACAGCGGCGCCAC
AGTTACATCAGTTACGCTGCTAGCCGTGATCCCCAACCACACCTCGAGGA
TAGCGCGTCTGGCGGCGGCGCGCGCATCCATCGCCGCGCGCTCCCTCGCC
AGCGGTGCCAGCAGAGGCGCGCGCCAAATCAAGGCCAACATGAACACGGG
CTCGCTGCACTTCAAGCCAGCCGCTGCCGCTGCCACGGGGGCGAGCTTGA
AGTTGGCGGCAGTTGCGAAGCTGTCGGGGCTGAAGCGCGAGAGCGCGCCG
CCGCGGCCGCAGAGCGACGGCCACGGCGCATTAGGCGGTGCTGATGCTCA
GCTGTGAACATGATGGCGGCGAGGGCAAAGCAGTGCACAGCGCCAGCAGC
TGCAGAGCAGCGATTATGGCCCAGCTCGGACGTGGTGCTTGGGCCAGCAA
TTGTGAGCTGTTGGTCGAGACAGCGCTCTATTGCGGCCGCAGAGCCATGG
CTGTGGCCGCACAGCGACGCCTATGGCCCTGCAGGAGGGCGCTAAGGCTC
AATCATGGTGGCTGCGGTCATGAATATGTCGGGACTAAAGTGAGGCAGCG
CTCCGCCGCGGCTGCAGCGCGGTGACTAAG

protein sequence of jgi.p|Trimin1|354308

>Trimin1|354308|estExt_Genemark1.C_Ctg_2290012 ID=Trimin1|354308|estExt_Genemark1.C_Ctg_2290012|Name=jgi.p|Trimin1|354308|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=569bp
MGLVLSTLGLGLTWAVCLSLVLAVAAVLQLPDNVVREGIRPGLAGARAWA
LLRLLVSELPPPHSPASKRGGAPASSSSLTVTAVTARQQRSPSPRAAAAA
AAAASVLSAASGDDPAGGVAVATVKPAAAAAAAAAAAGGGRTLLPAAMAA
AGGRHSQTAKQAHRRARLQFLEGLSAAVHEPRIVDAQFVSYKVELALPLR
RTLAAVRVGDARGAGAGAGVGGEGEGGARQDVAQWAVWRRITDFAVLRAA
LLKAEANHGGGGGSGTGSSGGGGGGNSAVSLPVLPHSLRRTFEPDHLAKR
AARLHRFMEVVLQDPLMRTSQDLFDFITPREWDAALPQTSTPTQTTTSTT
PAQHRRSSSLAAAAAAMASAADRSTAQQSSLANQNTRAVAAAPASAAAAA
AALDDVSSGGGETPVASPRLGLRDLERASEQSSIALGEQSQSDCPLGARL
AAARASFAARSLDSGATVTSVTLLAVIPNHTSRIARLAAARASIAARSLA
SGASRGARQIKANMNTGSLHFKPAAAAATGASLKLAAVAKLSGLKRESAP
PRPQSDGHGALGGADAQL*

mRNA from alignment at Contig_229:118024..127489+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18436 ID=mRNA_18436|Name=jgi.p|Trimin1|354308|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9466bp|location=Sequence derived from alignment at Contig_229:118024..127489+ (Tribonema minus UTEX_B_3156 )
ATGGGGCTGGTCCTTTCTACGCTGGGCCTGGGCCTTACCTGGGCGGTGTG
CTTGAGCCTTGTGCTGGCGGTTGCAGCTGTGCTACAGCTCCCCGACAATG
TTGTCAGAGAAGGCATACGACCAGGGCTTGCAGGCGCCAGGTAAGCCGTT
CTGCACACTAGTCCCGGCGACCTTACAGGCATGGACCTCACAAGAAGCAG
TATACTATATATTTTTGTTAAATCGACTCGACGAAAAAGGGGCGAGCGAC
CCGGAAAGGTACAGCCTTTTTTGTAAATTGCATTTAAAGCGGGTCACGGG
CATCACCTCAACTTTGCTTTCATCTGAAGTGCTCCCCCACTTCAACTTGC
CTATTGACACGCAACACACACATGCAACGCGCTGTTGACGTTACGCGCAC
GCGCGTACTCGATGCTGCAGAATTACATCTGCCTTGCCACTACACGGTGC
GAGAAGTGCGGACGCAAGACAAACGAATTGGAAGCGGTGTTGCGTGAAGC
TTACTGGGTGCAAGAGGCGCGAAAGTCGATGAGCGATGCTGTGGTGATTT
ATTGAGCGCGCTTCAGACGCTGATGGGGCATGCGGGCAACAGGTGCAGGC
GGCAGGTACAGCCAGCGGTGCTGTAGTCATAAATCAAATTACATGTATTC
ATTGCAAGCCTGCAGCGCTGGAGCAGACACTGGCTAGTCGGCACCTCACA
AATGTCAAGTGCATCAAAGCTAGCACGACACAATGTGGCATTGACATTGA
GTTCACGATTGCTTCACGATGATGCGCCCCAGCGACTACAACATGAACAC
TGGCCCTCGTCACCCGATTCAAGCTGCAGGCCACCACAAATACACGTCAC
CCTGCGTGCAATAACGTGCATTTCACTGGCAAGCGTGCAGCCTGCCGGTA
CACTGACGTCATTGCAAATGTGCACGGGACACCTCATGACACACCGTGAC
AATGTAACAGCGCAGCGCACAAGTGACAGCACACAGCTCAGCTCATGTTG
AAGTCGTGTCCTGTTGAGCACTGACGTGGCTGTTCATGTTTGCCTCCCGG
TTCTCAATGATCACTTCTAGCCACACACGCACTAGCCGAAAGTCTTGCTT
CTGTTTGGGTGCCTTGATTGTCAATCTCTGGCACTGTGGGGAGCTATACT
CAGCAAAAAAGCTCAAGCCAAGCGTCAACTCGAACGTGACATACTGCAGC
TGCTACGTTGACATGCGTACGTGGCCAGGAGTGCTAGTGGCAGTGTGATA
TGGCCCATAATCACATTCGCGTAATAGACTGCGTGAGGGAAGCTGGCGAG
CACGGCGCACTGGAGGAAGACTCAATAAGCGTGTTTGCTCTCCTGCTGAG
CACTGCTGCCACAGGGCCTGCTGCTGATCAAGCAAAGGCAAAACGCTTTC
AATGCTGATTACAACAAGGGACCCCTTGTATAAACTCTCAACACGTGTTT
TGCCATACTGCTGAGCACTGCTGCCACAGGGCCTGGGCGCTGCTGCGGCT
CCTGGTGTCGGAATTGCCGCCCCCCCACAGTCCCGCCAGCAAGCGCGGGG
GCGCCCCAGCTTCCTCCTCATCACTGACAGTTACGGCAGTTACGGCGCGG
CAGCAGCGCTCGCCGTCCCCTCGCGCAGCAGCAGCAGCTGCAGCAGCGGC
ATCAGTGCTCAGCGCAGCTAGTGGGGATGATCCTGCGGGGGGAGTGGCAG
TGGCGACGGTGAAGCCTGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCG
GGAGGGGGACGAACGCTGCTGCCTGCCGCCATGGCAGCAGCGGGCGGGAG
GCACTCGCAGGTGCGGACTTGAAGTGCGCAATGAAGTCGGTGGCGTCGAT
GAGCGTAAGGGAGTGGTGCTCGAAACGCGCTTTAGAGCTGGTGACGTTGA
AGTGCATGTGGGAATGGTGTTGCTTTCTTACTCTTGGTGGTGAACATTTT
GTACGAGCAAGTGTTGAAACTTGTGTCTAGACCGCAGCTGCAGGGCGCGA
AGCATTTCAGGACCAGGTGGCTGGAAATGCTGCTGGGCAACTTCACGCTA
AGAACTTGAAGTAGCTGGCACGCATGTTGAGCACTGGCGGCTGATGCATT
GAGTGTTGACGTAGCATGATTGGTGCAGGCGCTGTGCCTGCTCTGACGTG
CCACCTGAGTGCTCCTTCTAAAACCAGTATTATGCATAGCTGTCCACAGG
CATTTTCCGTTCTTGCCATCTAAATCTCAACCATTGCTGCTGCAGACCAA
TCAGCCACTTATTGTGTTGAAGAGCAGCTATGAGCTGCGGCCCGTGTCGC
ATGCGGTGGCCAAGCGATCGCGGCTGTAAGTGCAGCCTTGCAAGGCCTGA
CTGCAACACTTCGGCAACTGCGCATCAGCAACAACAGTTCAGGTTTTTGG
TTACAACACCAAGCACTTGCTATTGCGGCTACCTCAACCCATTGCTGACG
CTGCTGTCGCTGCCGCATCACCTACCCCCCTAGCCCTAACTGCAATTCTA
GGCTGCGCGTGCCTCCTGGAAGTATTGTAGACCGAAAGCAGCGCCGCCAA
ACCCCAACAAGCAACGCCCCCTAACCCTTACCCCCCCCCACCCAATCCCG
TGCCACTGCGCAGACGACGAAGCAAGCGCACAGGCGAGCGCGGCTGCAGT
TTCTGGAGGGGTTGAGCGCTGCTGTTCACGAACCCTACCTTCAACCCTAG
GCTGCGCGTTCTTCTGGAGGTAGTGTGAACCATGCAACACTGCCTAGGTA
ACCTCAACAATCAACACCGCCTAACCCTACCCCCCCCCCCACAATCCTGT
GCCGCTGCTCAGACGGCGAAGCAAGCGCACAGGCGAGCGCGGCTTCAATT
TCTGGAGGGCCTGAGCGCTGCTGTTCACGAACCGCGCATCGTCGACGCGC
AGTTTGTCAGTTACAAAGTGGAACTGGCGCTGCCGCTGCGCCGAACGTTG
GCGGCGGTGCGTGTGGGGGATGCAAGGGGGGCGGGGGCGGGGGCAGGGGT
AGGGGGGGAGGGGGAGGGGGGGGCGCGGCAGGACGTGGCGCAGTGGGCGG
TGTGGCGGCGGATCACTGACTTTGCAGTGCTCAGGTGAAGTACGCTTAGG
GTTGGACCAGGGTTAGGGTTGGGGTAGGCTCAGGGTATCTGAGGTAGGGT
TGAAGTTGGGGCTCAGCAGAGCAATGTCTGATGGGAGGTGGCGCGGTGGG
TGGTGCGGCAGCGGGTCACTTACTGGTCACTGACTTTGCAGTGCTCAAGT
GAGTAGGGTCACTACTAGTAGGGTAGGGTTACTACTAGTAGGGTAAGGGT
AGGGATAGGGTCAGGGTTAGGGTCGGGGCCAATTGGGTCTCAGCAGAGCC
CTGCCTGACATGAGGTGGCGCGGTGGGCGGTGTTGCGATGGATTGTTGAC
TTTGCTGTGCTGATGTGGGTAGGGTTAGGGATAGGGTTTGGGTAAGATTA
GGGTTTTGGGGGTAGGGTCAGGGTTTAGGGAAGGGTTGGCGGAGCACTGA
CTTTGCCGTGCCCACGTGGGTGAAGTTGAGGTTAGGGTTAGGGTAGTATC
AGATTAAGTTGGGACAGGGTTTGACGGAGTCCTGACTATGCAGTGTTGAT
GCAACTAGGCGTAGCGTTCGGGTTTGCCGGAGCAAAAGTTGCCCTCTTTA
GTTGACCTCTGCAGGGCTGAAGGTACATATCATCGCAACCTGGTGGCACT
GACTTTGCTGTGCGCAGGCAAGTAGTCTGCGGCTGTGCATCAGTGTGCTG
CCGTAGCTGGCGCTGGAGCCATCTGAAGTTTGCGTTGCATTTGAATCAGC
GAGGCCTGCGGAAGGCTGAGGCCTGAAGCTAGGGCAATGCTTAGGTTAAG
ATGCTTAGGTTAAGGTGAGGATGCCGCACCTGCAGGAGGCCACATAATGG
TATAAGCTGACCAGGCTATAAGTAGGTCATGTGTCACATCAGTATTTGTA
ATTGAGTTGGGCTTAGGGTAGGTTGTGGACGACGATGGGGGTTTGAGCGG
CCTATGGCGGATGAATATAATGTAGGCCCAGTGTAACGTCGCCAAAAGTG
TACTATTTTGTGTTCAAACAAGAGTTGTTTTAGACTTTACACATGCATTG
TTGTGCAACATGTTTCTTTCACGATGGTCAGGTACTGAGCCATGTGGGCG
TCTTTGGCATACTTCACCTGGTGATGTTCCCCCTACGTTCTGCCCGCTGA
TCGGCAGAGAGCAGTTACTCTGTGACCTGGCTCAAATCGTCAGCAGCGCT
CACTCAGCTGCACGGTCACGTTCAGCAAATAAGCAACAGTCTACTGCACA
TTGTGACATGCTATCACAGCGGCACCAGTGGCCTTCACGGTGACCTTGCC
GTCACTTGCTGCAACCTCACAGTAAACTTCACACAGTGACATTACTTCAC
AGGCAACATTCCATCAGACGGCAGCGTTCCATAAGACGGCAGCAGTGATC
TTCACAACGACCTTGTTTTCACACACGCAGTAAACTACACATGGTGACAT
GCCATCAGGGTGGAACAGTCATGTTAACAGCAACCTTCACGTCATTCGCT
GCACCCTCATCATCAGGGCTGCCCTGCTGAAAGCGGAGGCTAATCACGGC
GGCGGCGGCGGCAGCGGCACTGGCAGCAGCGGCGGCGGCGGCGGCGGCAA
CAGCGCAGTGTCCCTGCCTGTGCTGCCGCACTCACTCAGGCGGACATTTG
AGCCTGATCACCTGGCGAAGCGCGCGGCACGGCTGCACCGCTTCATGGAG
GTGAGTGGAGCGTCGTATATTTTCAGTTGAAGTTCCCATGTACTTCATGT
GCCTCGTGCGCAGCACGTCTGCACCGCTTCATGCATGTGAGTGAAGCGGA
ACGTCATAGATGATTAGTTGAAGTTAATCCATACTTCATGTGACTCGTGC
GCAGCACCGCTGCACCGCTTCACGGAAGCGAGTGGAGCGTCGTACATGAC
CAGTTGAAGTTTACCCTGTGCCTCATGTGACTCGTGAGCTCAGATGAACG
ATTCAGAAGACAGTTACGCCATCATAACCCTAATTCTAACTCTGAGTGGA
ACGCAGTGTTTTACATAGGGGCCGGCTGTTGCTCATCCATACCGCACGTG
ACTCGTGAACTCACATGAACTTCAAGGCAATTTTTTTCATTCACAGACGT
GAGTGGGGTGGTGTACATGGGCAGTTCAGTCACAGTTCTCCCACGCTTCA
TGATAATTGAATTGCAACAATGAAGTCGCCCTAACCCTAACCCTAAGCCT
GAAAGCCGCAACTACTCCAAGTGTGTGCACCGCCTTGTAAGGCATCATTG
TTTACAATCAGGTGTTGCGTGTATGCTCGTGGCACGCGACTGTCAAGCCT
AAACCGCCGGTGTGCAACCACTGCTAGCGCAAACGTCAACTTCTGAGCAC
TCTGCTATATGAGAGTACATGTGCTGGCACCATCGTCATCGCTGCAGTCG
CTGAGGTGACCGTTGAGCTGGTGCTTCGCAAGGCAGGCATCATCTCGTCG
ACAAGAGGTGGCAAGTGTAAAGTGTCAGCGAACTGGCCTCAAGTGATACA
CCTCATGAGATTCATGTGATCCAGGCTGCGCTGCACGCTGCACTGTTTGG
ATAAATCAAATCGAAACGCAGTTTAATGATAATCAAGGGTGAGGCTCAAG
TTGACTAACCTGACCCTAACACTAGCCCTACCCCTGGGATAGTCTTACAC
TGCGCACCCCTCTAGCATGCTGCTACAAACCAGACTCTCAACTCAACGTG
TACTGCTCTTCCCGCCCCAAACTCTGCCACAATACAATGTGGATATGGTG
ACACTGTTTGACTCGTGGCCAATTGCCGCAGCAGCGGCGACCACGGTCAT
TGGCGGAAGGCATTCAATTTGACGGCCGACGACACCTTGTCACCTACTAG
TCTAGCTCTACGATCTTTTGATTCGTTTCCACGATACTGATACCCTACAT
ACCCCATGCTCTGATGGTGACGCTCAGGTGGTCCTCCAGGACCCTCTCAT
GCGCACGTCCCAAGACCTCTTCGACTTCATCACGCCGCGCGAGTGGGACG
CGGCGCTGCCACAAACTTCAACTCCAACCCAAACTACAACTTCAACAACG
CCCGCGCAGCACCGCCGCAGCAGCTCCCTGGCTGCAGCGGCAGCGGCAAT
GGCATCAGCAGCGGACCGCAGCACTGCTCAGCAATCATCCCTGGCCAATC
AGAATACCAGGGCGGTAGCGGCGGCGCCAGCATCAGCGGCGGCGGCGGCG
GCGGCGCTTGACGATGTGAGCAGTGGCGGCGGGGAGACCCCGGTGGCTTC
TCCGAGGCTCGGTCTTCGGGACCTGGAACGCGCCTCAGAACAGTCTTCGA
TCGCGCTGGGGGAGCAGTCGCAGTCAGACTGCCCGCTGGGAGGTATGTAT
ACAAGCGTGTCGAGAAGTTATGTGCCTGTGTACGCATGCATGCATCCCGT
AAGCTGTATCGCGCGTCTCTTGATGTTTTGCAGCGACACAGAAGTGCATA
TGCAGAAGTGGTAGTCTATGCGCGTTGAGACACTTTCAAGTTTTCACCAG
ATGCATGTAGAGTTCGGTAGCAAGCTTTTCCTCGACCCTGGGCGAGAATT
AGTAAAATGTACTTTTGCAGTTCACATCTGGTTTCCTTAGTGAACCACAA
GTGCTCACGGTGTACTGCGCGTCTCTTGTTGATTTGCACTGGCACATATA
TACATACACAATACGCCTCTGTATTCCTGTGTGTACCACAAGAGCTCACT
CACGCTGCACTGCGCGTCTCTTGTTGATTTGCACTGGCACAAAAGTACAT
ACACAGTACTCCTCTGGATTCCTGTGTGAACCACAAGTGCTTTACGCTGT
ACTTTGTTGTACTCATTGCGTCTCTTGTTGATTCGCACTGGCGCAGAAGG
CTCTGCAGGCGAGGGATACGAGCTCTCAACCTCCCCCATGGCACGAGGCA
GCATGTTCTCAGCTATGCAGGGGGACGGGAGGGGTTCATTGAGCCCTACC
GTCAACGACTTGGGAAGCCCTGCATCTGGCAGTAGGTGAGATCACAAGAC
GCTTGACTACTTTTGAAGTGCCTGTGATTCTCAGCGTGCAGTAAGCCCAC
TCGGGCGAAGCAGGCAGCTGAGTGGGATCAGACCCCAGCGTTCACTGGCG
ATATTATTTTGACTTGTGCTCAGAGTGCCTTGAACCTCAAGAAACTCGCT
GAAAGTGCGATCCAGTTGTCATTAGTTCACTTTGGCCAATGGGTTTGGGA
GCCTTGCCCAGCCTGTGGTGCAGCTCTGTCACGCCGGCACAAGTATGGCC
CTCCCCTTGTATTTCTGTATAGCACTTGTAGTGCGACACACATCTTGAGA
TCTGTGTGCATACATGCATGCACCGCTGCCCACATTATCTAGCCAGTACT
GCCATCTGGGGGCATGTACGCATTCGGCGCACTCGTACCGTCCCCCTTCC
CCTCACCCCTGTCCTCATCATGCCCTACGCCACAGGCAGCATGGCACCCG
CAGTTGCGCGCGCGCATTTGTATGCGATGCATTTCCAGTTGTTGCTACTT
TGTCGTAGTACCCTATAACGGTAGCGGTTACATGTCGTAGATTCCTCGTG
TCGTTGCTTGCTTCATGCTGCAGTCCGTGCATGCACCGTGCTGCAAATTC
TGTCCACGATCGTGCGCCGATGTGTTTTGGTGTTGACGTTGACGCTGATC
TGACCCTCATCGGTCTCGCTGAATCTGCAAGGCAGGCAGCGTCGTCTTCT
CATGCAGCTACTGATGGCATTATCCCATGAAGTGACTAAAACATCACAAA
ACCTGTCTGTGCTCGAGCCCCTTTTCCCCACCCTCCTTTCACCCATTCGC
TATGGTAGTCCCATGGGACAATGTCAGGTGGGGCTCAAATTGTTCAGCCA
GTTCTTGCCGCCCAGTCTGGTGCTCGTCGAATATACCTACCCCACCAATA
GGCTCATGACTTTGGTGTCTCATGTGTAGCGCAGCTGGCAGTGGACTCGT
CCCTGCATTTCAATGCCAGGTTACACTGCTAGCCGTGGTCGCCGAATTTA
CGTTCCCCCTTCCTGCATGCATACGCTGCACTACATACATGCTGCACCGT
CAAGCCCCAGCCCTAATGTAACGCTTCCGCTGCCCCGCCCCATATCATCA
CCGCTCAGCTCGAGGATAGTGCGTCTGGCGGTGGCGCGCGCGTCCATCGT
TACACGCTCCCTCGCCAGCGGCGCCACAGTCACATCAGTTACGCTGCCAT
CCCCAACCGCATGTTCCCCCTTTCTGCTTGCACATGCTGCACTACATACC
TACTGCACCAATAAGCCCCGGTCCTAACGCTTCCGCTGTCCCGCCCCATG
TCATCACTGCTAAGCTCAAGGATAGCGCCCTAACGCTGCTGCTTCCTCAC
CCAATGTCATCATCGCTCAGCACGAGGATAGCGGGTCTGCATGCATACGC
TGCACTACATACGGTAACATACCGCACCCCCCCTAACGCTGCCATTGCCC
CGCCCCATGTCATCATCGCTCAGGTCCAGGATAGTACGTCTGCACTACAT
ACTGCACCACAAAGCCTCTCCCCCTGACGCCGCTGCCATTGCCCCGCCCC
ATGTCATCATCGCTCAGCTCGAGGATAGTGCCCTAACGCTGCTGCTGCCC
CGCTTCATGTCATCATCGCTCAGCTCGAGGATAGCGCGTCTGGCGGCGGC
GCGCGCGTCCTTCGCCGCGCGCTCCCTCGACAGCGGCGCCACAGTTACAT
CAGTTACGCTGCTAGCCGTGATCCCCAACCACACGTTCCCCCTTTCTGCA
ATGCACACGCTGCACCACTGCTTCGTCATGCCCCGCCCCTAACGCTGCTG
CTGCCTCACCCAATGTCATCACTGTCAAACCCCACCCCTGACGCTGCTGC
TTTCTCACCCCATGTCATCACCGCTCAGCTCGAGGATAGCGCGTCTGGCG
GCGGCGCGCGCATCCATCGCCGCGCGCTCCCTCGCCAGCGGTGCCAGCAG
AGGCGCGCGCCAAATCAAGGCCAACATGAACACGGGCTCGCTGCACTTCA
AGCCAGCCGCTGCCGCTGCCACGGGGGCGAGCTTGAAGTTGGCGGCAGTT
GCGAAGCTGTCGGGGCTGAAGCGCGAGAGCGCGCCGCCGCGGCCGCAGAG
CGACGGCCACGGCGCATTAGGCGGTGCTGATGCTCAGCTGTGAACATGAT
GGCGGCGAGGGCAAAGCAGTGCACAGCGCCAGCAGCTGCAGAGCAGCGAT
TATGGCCCAGCTCGGACGTGGTGCTTGGGCCAGCAATTGTGAGCTGTTGG
TCGAGACAGCGCTCTATTGCGGCCGCAGAGCCATGGCTGTGGCCGCACAG
CGACGCCTATGGCCCTGCAGGAGGGCGCTAAGGCTCAATCATGGTGGCTG
CGGTCATGAATATGTCGGGACTAAAGTGAGGCAGCGCTCCGCCGCGGCTG
CAGCGCGGTGACTAAG

Coding sequence (CDS) from alignment at Contig_229:118024..127489+

>mRNA_18436 ID=mRNA_18436|Name=jgi.p|Trimin1|354308|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1707bp|location=Sequence derived from alignment at Contig_229:118024..127489+ (Tribonema minus UTEX_B_3156 )
ATGGGGCTGGTCCTTTCTACGCTGGGCCTGGGCCTTACCTGGGCGGTGTG
CTTGAGCCTTGTGCTGGCGGTTGCAGCTGTGCTACAGCTCCCCGACAATG
TTGTCAGAGAAGGCATACGACCAGGGCTTGCAGGCGCCAGGGCCTGGGCG
CTGCTGCGGCTCCTGGTGTCGGAATTGCCGCCCCCCCACAGTCCCGCCAG
CAAGCGCGGGGGCGCCCCAGCTTCCTCCTCATCACTGACAGTTACGGCAG
TTACGGCGCGGCAGCAGCGCTCGCCGTCCCCTCGCGCAGCAGCAGCAGCT
GCAGCAGCGGCATCAGTGCTCAGCGCAGCTAGTGGGGATGATCCTGCGGG
GGGAGTGGCAGTGGCGACGGTGAAGCCTGCGGCAGCGGCGGCGGCGGCGG
CGGCGGCGGCGGGAGGGGGACGAACGCTGCTGCCTGCCGCCATGGCAGCA
GCGGGCGGGAGGCACTCGCAGACGGCGAAGCAAGCGCACAGGCGAGCGCG
GCTTCAATTTCTGGAGGGCCTGAGCGCTGCTGTTCACGAACCGCGCATCG
TCGACGCGCAGTTTGTCAGTTACAAAGTGGAACTGGCGCTGCCGCTGCGC
CGAACGTTGGCGGCGGTGCGTGTGGGGGATGCAAGGGGGGCGGGGGCGGG
GGCAGGGGTAGGGGGGGAGGGGGAGGGGGGGGCGCGGCAGGACGTGGCGC
AGTGGGCGGTGTGGCGGCGGATCACTGACTTTGCAGTGCTCAGGGCTGCC
CTGCTGAAAGCGGAGGCTAATCACGGCGGCGGCGGCGGCAGCGGCACTGG
CAGCAGCGGCGGCGGCGGCGGCGGCAACAGCGCAGTGTCCCTGCCTGTGC
TGCCGCACTCACTCAGGCGGACATTTGAGCCTGATCACCTGGCGAAGCGC
GCGGCACGGCTGCACCGCTTCATGGAGGTGGTCCTCCAGGACCCTCTCAT
GCGCACGTCCCAAGACCTCTTCGACTTCATCACGCCGCGCGAGTGGGACG
CGGCGCTGCCACAAACTTCAACTCCAACCCAAACTACAACTTCAACAACG
CCCGCGCAGCACCGCCGCAGCAGCTCCCTGGCTGCAGCGGCAGCGGCAAT
GGCATCAGCAGCGGACCGCAGCACTGCTCAGCAATCATCCCTGGCCAATC
AGAATACCAGGGCGGTAGCGGCGGCGCCAGCATCAGCGGCGGCGGCGGCG
GCGGCGCTTGACGATGTGAGCAGTGGCGGCGGGGAGACCCCGGTGGCTTC
TCCGAGGCTCGGTCTTCGGGACCTGGAACGCGCCTCAGAACAGTCTTCGA
TCGCGCTGGGGGAGCAGTCGCAGTCAGACTGCCCGCTGGGAGCGCGTCTG
GCGGCGGCGCGCGCGTCCTTCGCCGCGCGCTCCCTCGACAGCGGCGCCAC
AGTTACATCAGTTACGCTGCTAGCCGTGATCCCCAACCACACCTCGAGGA
TAGCGCGTCTGGCGGCGGCGCGCGCATCCATCGCCGCGCGCTCCCTCGCC
AGCGGTGCCAGCAGAGGCGCGCGCCAAATCAAGGCCAACATGAACACGGG
CTCGCTGCACTTCAAGCCAGCCGCTGCCGCTGCCACGGGGGCGAGCTTGA
AGTTGGCGGCAGTTGCGAAGCTGTCGGGGCTGAAGCGCGAGAGCGCGCCG
CCGCGGCCGCAGAGCGACGGCCACGGCGCATTAGGCGGTGCTGATGCTCA
GCTGTGA