mRNA_1780 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A836CDT3_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT3_9STRA) HSP 1 Score: 853 bits (2203), Expect = 2.530e-311 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1 Query: 1 MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR 1389 MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR Sbjct: 1 MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR 463
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI) HSP 1 Score: 350 bits (898), Expect = 3.660e-112 Identity = 221/450 (49.11%), Postives = 289/450 (64.22%), Query Frame = 1 Query: 70 KEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVP--DLVEGAREHALPFYTVEDAYRLQLALRALRAR-SDDAPADVVVVGGSLCGVEIAATIAGVLDSARITM----VTRAP--ELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDA--ETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAA-------DGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDK 1365 + IC++GGGFGGLYTALRL K+PW P +TL+DKRDKF FLPLLY+ A G A+L EVAPTF+ LL G+G+SFVQ V+ IDL K + VAGA DDL+G + D ADETR L YD L++A+GAEP D V GARE A+PFY++ED+YR++ A+ L+A + A + VVVVGGS GVE++ +A L R M VT A E+LS A P NR AG ++ GV V V V G V + G G D E + ADL+VWTAGS+P+ LL ++ + DARGR+ V L G+ VYCLGD AAV+G + + AQ A+QQSDYVA+N A RR+ PL FR+++LG+M++LG DG+++ LG RV L G AA ARRAVYA+RMPT PQR AAAS A TA ++ ++D GL+ +++ Sbjct: 98 ERICVLGGGFGGLYTALRLQKMPWRGRRPVVTLVDKRDKFTFLPLLYEFAIGNAELDEVAPTFRELLAGSGVSFVQGCVSNIDLDGKGVTVAGATSDDLDGFMISDNADETRTLEYDKLVLAVGAEPASGIDKVPGARERAIPFYSIEDSYRVKQAIIKLKALVREKAVSRVVVVGGSYAGVELSCNLATELGGGRKGMGKVEVTLAAGSEVLSMATPGNREAGLRRLTESGVHVMKGARVSEVKEGGGVVLQQGEGK----GTDSTFREEIMADLLVWTAGSQPSSLLDSLD-VRKDARGRIEVDRRLRLIDAAGNDGGVGDVYCLGDIAAVEGLE-LGCNAQVALQQSDYVAYNIWADKERRK--PLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNPQRVRAAASAAAGTAFSVTNAIIDKGLNFIER 539
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S4BRY4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRY4_CHRCT) HSP 1 Score: 300 bits (769), Expect = 5.600e-94 Identity = 190/407 (46.68%), Postives = 257/407 (63.14%), Query Frame = 1 Query: 67 RKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADE-TRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQ 1275 R++IC++GGGFGGLYTAL+L+KL WG P ITL+DK D+F FLP++Y+L G EVAP F+ +L G+G+ F+Q V +D SK I VA DE +R LPY+ ++ALG+E V GAREH+ PFYT++DA +L+ AL L R AP VVVVGGS GVE+AA + L D +T+V R+ LLS + NR G ++R+ GV V +SV V +A+ A GA+ + L AD++VWTAGS+P+GL + G+ +DA+GRV V + L G D V+ LGD A+++ A G VP+TAQ+AMQQ++Y AWN AA R + PL FRY +LG+M+SLG A+ ++S+LG GP A+AARRAVYA RMPTA Q Sbjct: 52 REDICVLGGGFGGLYTALKLSKLDWGTCKPRITLVDKHDRFAFLPMMYELTTGSVSCWEVAPMFEEVLNGSGVQFLQGDVQRLDRESKLITVA--------------TGDECSRQLPYNQCVLALGSEVSYAGVAGAREHSFPFYTLDDALQLREAL--LTRRLGAAPVRVVVVGGSYIGVELAANLREWLGDKVDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN--------GAE--QQLSADIVVWTAGSKPSGLAASL-GVEVDAKGRVVVDSALRVCGCDDVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGER--PLAFRYANLGEMLSLGGAEASLSSLGV-FNFEGPVASAARRAVYAARMPTASQ 428
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S0JEC2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC2_9EUKA) HSP 1 Score: 281 bits (720), Expect = 8.310e-87 Identity = 186/428 (43.46%), Postives = 256/428 (59.81%), Query Frame = 1 Query: 67 RKEICIVGGGFGGLYTALRLAKLPW-GNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA-RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGV--PATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLL 1338 R ++CI+GGGFGGLYTALRLA L W G P + L+D+ ++F FLP++Y+L G A EVAPT++ +L G+G+ FV V+ +D + ++V L + E LPYD+ ++ALG+EP + GAREHALPFYT++DA +L+ L + AP VV+VGGS GVE+AA + L + +T+V RA LLS++ +R G ++ GV V T+V + + +R E A+ L ADL+VWTAG++P+ L + GL LD RGR+ ATL +G S+Y LGD A + A G P+TAQAAMQQ+DY AWN AA R L FRY DLG+M+SLG G+++ALG + L+GP A+ +RRAVYA RMPT Q S AV+ AA +S LL Sbjct: 25 RPDVCILGGGFGGLYTALRLASLEWKGVPKPRVRLVDRNERFAFLPMMYELTTGTASCWEVAPTYEEVLNGSGVEFVHGDVSKLDTETSMVSV------------LTPSHGELL-LPYDECVLALGSEPSFADIAGAREHALPFYTLDDALQLRDRLLVQQRAPRAAPLRVVIVGGSYVGVELAANLQSWLGAQLELTLVHRAAALLSSSREFSRLVGVQRLEESGVKVHLDTTVLGIDTHGVTLRDSCAADGAEHAAE--RRLDADLVVWTAGTKPSSLASAL-GLPLDERGRICTDATLRVNGCSSLYALGDVATLVDARGSRPPSTAQAAMQQADYAAWNVRAA--RLGGPTLAFRYADLGEMLSLGDGYGSLTALGA-INLQGPLASLSRRAVYAARMPTTKQAGRVGLSWAVDAAAGVASRLL 433
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S0LKG6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKG6_9EUKA) HSP 1 Score: 279 bits (713), Expect = 1.420e-85 Identity = 188/428 (43.93%), Postives = 255/428 (59.58%), Query Frame = 1 Query: 67 RKEICIVGGGFGGLYTALRLAKLPW-GNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA-RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGV--PATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLL 1338 R +C+VGGGFGGLYTALR A L W G P + LID+ D+F FLP++Y+L G A EVAPTF+ +L G+G+ FV+ V+ +D +K ++V G G L LPYD ++ALG+E V G RE ALPFYT++DA +L+ L A + + P +V+VGGS GVE+AA + S +T+V RA LL+++ +R G+ +++ GV V T+V + A + V G A G AGA + + L AD++VWTAG++P+ L + GL LD GR+ ATL DG S+Y LGD A++ A G P+TAQAAMQQ+DY AWN AA L FRY DLG+M+SLG GT++ALG + L+GP A+ RRAVYA RMPT Q S A + AA + LL Sbjct: 36 RPNVCVVGGGFGGLYTALRFASLEWKGISKPRVRLIDRSDRFAFLPMMYELTTGTASCWEVAPTFEEVLNGSGVEFVRGEVSGLDTEAKMVSVQGG-----GGELL---------LPYDQCVLALGSEASFADVLGVREFALPFYTLDDALQLREHLLARQRSTRGPPTRIVIVGGSYVGVELAANLHAKFGSQFDLTLVHRADALLTSSKEFSRLVGSQRLKESGVKVLLDTNVLRIDADGVDVCPARGSA-GSAGAPE-QRLDADMVVWTAGTKPSRLAASL-GLPLDEAGRICTDATLRVDGCSSLYALGDVASLTDARGSRPPSTAQAAMQQADYAAWNVRAALLGGPT--LAFRYADLGEMLSLGEGYGTLTALGA-INLQGPLASLTRRAVYAARMPTTKQATRVGLSWAADAAASVAKGLL 443
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A6H5JVX1_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX1_9PHAE) HSP 1 Score: 275 bits (703), Expect = 1.160e-83 Identity = 177/383 (46.21%), Postives = 235/383 (61.36%), Query Frame = 1 Query: 70 KEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRD--------LPYDDLIIALGAEPVP--DLVEGAREHALPFYTVEDAYRLQLALRALRAR-SDDAPADVVVVGGSLCGVEIAATIAGVLDSAR-------ITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDA--ETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATL-------AADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYM 1137 + IC++GGGFGGLYTALRL K+PW P +TL+DKRDKF FLPLLY+ A G A+L EVAPTF+ LL G+G+SFVQ V+ IDL K + VAGA DDL+G + D ADE+ D L YD L++A+GAEP D V GARE A+PFY++ED+YR++ A+ L+A + + VVVVGGS GVE++ +A L R +T+ + E+L+ A NR AG ++ GV V V V G V + G G D A E + ADL+VWTAGS+P+ LL ++ + DARGR+ V L +A G+ VYCLGD AAV+G + + AQ A+QQSDYVA+N A RR+ PL FR++ Sbjct: 100 ERICVLGGGFGGLYTALRLQKMPWRGRRPVVTLVDKRDKFTFLPLLYEFAIGNAELDEVAPTFRELLAGSGVSFVQGCVSNIDLDGKGVTVAGATSDDLDGFMVSDNADESEDILGVGARTLEYDKLVLAVGAEPASAIDKVPGARERAIPFYSIEDSYRVKQAIIKLKALVREKTVSRVVVVGGSYAGVELSCNLATELGGGRKGKGKVEVTLAAGS-EVLAMATSGNREAGLRRLAESGVHVMKGARVSEVKEGGGVVL-QQGEGKARTGTDSAGGEEIMADLLVWTAGSQPSSLLEPLD-VRKDARGRIEVDRKLRVVEAAGSAGGVGDVYCLGDIAAVEGLE-LGCNAQVALQQSDYVAYNIWADKERRK--PLDFRWV 476
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A0G4FP32_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FP32_VITBC) HSP 1 Score: 267 bits (683), Expect = 1.520e-77 Identity = 182/425 (42.82%), Postives = 248/425 (58.35%), Query Frame = 1 Query: 55 AQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA----RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESV------AAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARG-RVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAAS 1296 A+ ICIVGGGFGGL TAL L+KLPW P ITLID +D+FVFLPLLY+LA G A+ EVAP F+ LL GTGI FV+ V +ID+ K ++V+G A E R+L Y L++A+G EP + G E AL F + DA +L+ ++ ++ R D PA VV+VGG GVE+A +A L S +I+++ R P+L+ +A NR +R VDV TSV S+ + + V+ + G++D+ L ADL++ TAG R +GL V G RG R+ V TLA GL VY +GD A + G +G TAQAA QQ+DY+ WN A+ + PL +RY LG+M++ G DG+++ALG+RVTL GP A+ ARR+ Y +R PT QR AA S Sbjct: 94 AESSANRICIVGGGFGGLLTALGLSKLPW-KVQPEITLIDTKDQFVFLPLLYELAVGTAEQSEVAPLFRELLYGTGIRFVKGRVDSIDVDGKKLSVSG-------------AGGERRELGYGRLVLAMGGEPSAGGIPGV-ERALRFTALNDAIQLKKEIQRIK-RIRDRPARVVLVGGGYIGVELATNLAAALSSQSPPPQISLLHRGPQLMPLSAEHNRKQAIRALREARVDVSLETSVASIRPASDTSGSEVVVQKK--------GSEDSSVLPADLVIMTAGVRASGLADMVNGRVERGRGGRLAVERTLAVKGLGDVYAIGDVADLGGVEG-EGTAQAAFQQADYLVWNIWAS--YNDKKPLAYRYTKLGEMLTFGPLDGSVAALGDRVTLGGPLASIARRSAYIIRQPTPRQRLRAALS 491
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A2P8WKQ5_9CYAN (FAD-dependent oxidoreductase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WKQ5_9CYAN) HSP 1 Score: 255 bits (652), Expect = 3.300e-77 Identity = 168/404 (41.58%), Postives = 236/404 (58.42%), Query Frame = 1 Query: 67 RKEICIVGGGFGGLYTALRLAKLPWG-NDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPT 1266 + +CI+GGGFGGLYTALRL+KLPW ++TP I L+D+RD+F+F PLLY+L +G E+AP F+ LL TGI F QA+V +IDL ++ ++ + DL YD L+IALG E D+V GA EHA+PF +EDAY+L+ LR L A SD V VVGG GVE+A +A L + R+ +V R+ ++L + NR A + LGV + T+VES+ + + R+ + L D+++WT G+R N +L + L ++R ++RV ATL +G +Y +GD A ADG VP TAQAA+QQ+DY WN A+ + R LPFRY LG+M++LG+ T++ LG + L G A ARR Y RMPT Sbjct: 5 QSRVCILGGGFGGLYTALRLSKLPWSKSETPEIVLVDQRDRFLFSPLLYELVSGELQTWEIAPPFEELLANTGIRFHQAAVQSIDLDGRNTTLSTGV-----------------DLAYDRLVIALGGETPMDMVPGATEHAIPFRDLEDAYQLKERLRVLEA-SDQDKIRVAVVGGGYSGVELACKLAERLGERGRVRLVERSDDILQTSPEFNRNAARKVLSDLGVWIDLDTTVESIGPDSFTLVYRE----------QRDLLPVDIVLWTVGTRVNPVLDALP-LPRNSRQQIRVDATLQVEGHPDLYAVGDLADCHDADGQQVPPTAQAALQQADYAGWNIWASLQ--DRPLLPFRYQHLGEMMTLGSDRATLTGLG--IQLDGELAHVARRLAYLYRMPT 375
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S4BRQ4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ4_CHRCT) HSP 1 Score: 256 bits (654), Expect = 2.950e-76 Identity = 162/359 (45.13%), Postives = 221/359 (61.56%), Query Frame = 1 Query: 67 RKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADE-TRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFR 1131 R++IC++GGGFGGLYTAL+L+KL WG P ITL+DK D+F FLP++Y+L G EVAP F+ +L G+G+ F+Q V +D SK I VA DE +R LPY+ ++ALG+E V GAREH+ PFYT++DA +L+ AL L R AP VVVVGGS GVE+AA + L D +T+V R+ LLS + NR G ++R+ GV V +SV V +A+ A GA+ + L AD++VWTAGS+P+GL + G+ +DA+GRV V + L G D V+ LGD A+++ A G VP+TAQ+AMQQ++Y AWN AA R + PL FR Sbjct: 52 REDICVLGGGFGGLYTALKLSKLDWGTCKPRITLVDKHDRFAFLPMMYELTTGSVSCWEVAPMFEEVLNGSGVQFLQGDVQRLDRESKLITVA--------------TGDECSRQLPYNQCVLALGSEVSYAGVAGAREHSFPFYTLDDALQLREAL--LTRRLGAAPVRVVVVGGSYIGVELAANLREWLGDKVDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN--------GAE--QQLSADIVVWTAGSKPSGLAASL-GVEVDAKGRVVVDSALRVCGCDDVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGER--PLAFR 381
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: K9XL53_9CHRO (NADH dehydrogenase n=6 Tax=Cyanobacteria TaxID=1117 RepID=K9XL53_9CHRO) HSP 1 Score: 251 bits (642), Expect = 9.070e-76 Identity = 160/409 (39.12%), Postives = 234/409 (57.21%), Query Frame = 1 Query: 58 QKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPAD---VVVVGGSLCGVEIAATIAGVLDS-ARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPT 1266 Q+P + ICI+GGGFGGLYTALRL++LPW + P I L+D+ D+F+F PLLY+L G E+AP F +L GTG+ F Q SVT I++ + + + + ++PYD L++ALG E D+V GA +A PF T++DAYRL+ LR L +++P D + +VGG CGVE+A +A L++ ARI ++ ++L + NR A + A GV + TSV+ V AIA+ ++ +T+ D+++WT G+R ++R + L + RG++ ++TL ++ LGD A +G VPATAQAA QQ+DY WN A+ QR LPFRY LG+M++LG + T + LG + L GP A ARR Y RMPT Sbjct: 3 QQPAR-ICILGGGFGGLYTALRLSQLPWSSQKPEIVLVDQSDRFLFSPLLYELLTGELQTWEIAPPFSEILAGTGVRFYQESVTEINIDDQRVRL-----------------QDGVEIPYDRLVLALGGETPLDMVAGATSYAFPFRTIDDAYRLEARLRRL----EESPVDKIRIAIVGGGYCGVELACKLADRLENRARIRLIEMTDQILRTSPEHNRVAANKALEARGVWIDLETSVQEVEPQAIALEYKN----------QVDTIPVDIVIWTVGTRVAPVVRSLP-LKQNQRGQLTTTSTLQVIDHPEIFALGDLADCRDVEGQQVPATAQAAFQQADYAGWNVWASLT--QRPLLPFRYQHLGEMMTLGTDNATFTGLG--IQLDGPLAYVARRLAYLYRMPT 374 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1392bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGTCAGAAGCGCCAACTAGCGCCTCCGTCTATGCTGCGCAAGCTAAback to top protein sequence of jgi.p|Trimin1|158067 >Trimin1|158067|e_gw1.4.145.1 ID=Trimin1|158067|e_gw1.4.145.1|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDback to top mRNA from alignment at Contig_4:2031588..2033912+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2325bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_4:2031588..2033912+ >mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )back to top |