mRNA_1780 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158067
Unique NamemRNA_1780
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A836CDT3_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT3_9STRA)

HSP 1 Score: 853 bits (2203), Expect = 2.530e-311
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1
Query:    1 MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR 1389
            MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR
Sbjct:    1 MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKREQR 463          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 3.660e-112
Identity = 221/450 (49.11%), Postives = 289/450 (64.22%), Query Frame = 1
Query:   70 KEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVP--DLVEGAREHALPFYTVEDAYRLQLALRALRAR-SDDAPADVVVVGGSLCGVEIAATIAGVLDSARITM----VTRAP--ELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDA--ETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAA-------DGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDK 1365
            + IC++GGGFGGLYTALRL K+PW    P +TL+DKRDKF FLPLLY+ A G A+L EVAPTF+ LL G+G+SFVQ  V+ IDL  K + VAGA  DDL+G  + D ADETR L YD L++A+GAEP    D V GARE A+PFY++ED+YR++ A+  L+A   + A + VVVVGGS  GVE++  +A  L   R  M    VT A   E+LS A P NR AG  ++   GV V     V  V  G   V  +  G     G D    E + ADL+VWTAGS+P+ LL  ++ +  DARGR+ V   L          G+  VYCLGD AAV+G + +   AQ A+QQSDYVA+N  A   RR+  PL FR+++LG+M++LG  DG+++ LG RV L G AA  ARRAVYA+RMPT PQR  AAAS A  TA   ++ ++D GL+ +++
Sbjct:   98 ERICVLGGGFGGLYTALRLQKMPWRGRRPVVTLVDKRDKFTFLPLLYEFAIGNAELDEVAPTFRELLAGSGVSFVQGCVSNIDLDGKGVTVAGATSDDLDGFMISDNADETRTLEYDKLVLAVGAEPASGIDKVPGARERAIPFYSIEDSYRVKQAIIKLKALVREKAVSRVVVVGGSYAGVELSCNLATELGGGRKGMGKVEVTLAAGSEVLSMATPGNREAGLRRLTESGVHVMKGARVSEVKEGGGVVLQQGEGK----GTDSTFREEIMADLLVWTAGSQPSSLLDSLD-VRKDARGRIEVDRRLRLIDAAGNDGGVGDVYCLGDIAAVEGLE-LGCNAQVALQQSDYVAYNIWADKERRK--PLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNPQRVRAAASAAAGTAFSVTNAIIDKGLNFIER 539          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S4BRY4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRY4_CHRCT)

HSP 1 Score: 300 bits (769), Expect = 5.600e-94
Identity = 190/407 (46.68%), Postives = 257/407 (63.14%), Query Frame = 1
Query:   67 RKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADE-TRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQ 1275
            R++IC++GGGFGGLYTAL+L+KL WG   P ITL+DK D+F FLP++Y+L  G     EVAP F+ +L G+G+ F+Q  V  +D  SK I VA                DE +R LPY+  ++ALG+E     V GAREH+ PFYT++DA +L+ AL  L  R   AP  VVVVGGS  GVE+AA +   L D   +T+V R+  LLS +   NR  G  ++R+ GV V   +SV  V    +A+ A         GA+  + L AD++VWTAGS+P+GL   + G+ +DA+GRV V + L   G D V+ LGD A+++ A G  VP+TAQ+AMQQ++Y AWN  AA R  +  PL FRY +LG+M+SLG A+ ++S+LG      GP A+AARRAVYA RMPTA Q
Sbjct:   52 REDICVLGGGFGGLYTALKLSKLDWGTCKPRITLVDKHDRFAFLPMMYELTTGSVSCWEVAPMFEEVLNGSGVQFLQGDVQRLDRESKLITVA--------------TGDECSRQLPYNQCVLALGSEVSYAGVAGAREHSFPFYTLDDALQLREAL--LTRRLGAAPVRVVVVGGSYIGVELAANLREWLGDKVDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN--------GAE--QQLSADIVVWTAGSKPSGLAASL-GVEVDAKGRVVVDSALRVCGCDDVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGER--PLAFRYANLGEMLSLGGAEASLSSLGV-FNFEGPVASAARRAVYAARMPTASQ 428          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S0JEC2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC2_9EUKA)

HSP 1 Score: 281 bits (720), Expect = 8.310e-87
Identity = 186/428 (43.46%), Postives = 256/428 (59.81%), Query Frame = 1
Query:   67 RKEICIVGGGFGGLYTALRLAKLPW-GNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA-RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGV--PATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLL 1338
            R ++CI+GGGFGGLYTALRLA L W G   P + L+D+ ++F FLP++Y+L  G A   EVAPT++ +L G+G+ FV   V+ +D  +  ++V            L  +  E   LPYD+ ++ALG+EP    + GAREHALPFYT++DA +L+  L   +     AP  VV+VGGS  GVE+AA +   L +   +T+V RA  LLS++   +R  G  ++   GV V   T+V  +    + +R        E  A+    L ADL+VWTAG++P+ L   + GL LD RGR+   ATL  +G  S+Y LGD A +  A G   P+TAQAAMQQ+DY AWN  AA  R     L FRY DLG+M+SLG   G+++ALG  + L+GP A+ +RRAVYA RMPT  Q      S AV+ AA  +S LL
Sbjct:   25 RPDVCILGGGFGGLYTALRLASLEWKGVPKPRVRLVDRNERFAFLPMMYELTTGTASCWEVAPTYEEVLNGSGVEFVHGDVSKLDTETSMVSV------------LTPSHGELL-LPYDECVLALGSEPSFADIAGAREHALPFYTLDDALQLRDRLLVQQRAPRAAPLRVVIVGGSYVGVELAANLQSWLGAQLELTLVHRAAALLSSSREFSRLVGVQRLEESGVKVHLDTTVLGIDTHGVTLRDSCAADGAEHAAE--RRLDADLVVWTAGTKPSSLASAL-GLPLDERGRICTDATLRVNGCSSLYALGDVATLVDARGSRPPSTAQAAMQQADYAAWNVRAA--RLGGPTLAFRYADLGEMLSLGDGYGSLTALGA-INLQGPLASLSRRAVYAARMPTTKQAGRVGLSWAVDAAAGVASRLL 433          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S0LKG6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKG6_9EUKA)

HSP 1 Score: 279 bits (713), Expect = 1.420e-85
Identity = 188/428 (43.93%), Postives = 255/428 (59.58%), Query Frame = 1
Query:   67 RKEICIVGGGFGGLYTALRLAKLPW-GNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA-RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGV--PATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLL 1338
            R  +C+VGGGFGGLYTALR A L W G   P + LID+ D+F FLP++Y+L  G A   EVAPTF+ +L G+G+ FV+  V+ +D  +K ++V G       G  L         LPYD  ++ALG+E     V G RE ALPFYT++DA +L+  L A +  +   P  +V+VGGS  GVE+AA +     S   +T+V RA  LL+++   +R  G+ +++  GV V   T+V  + A  + V    G A G AGA + + L AD++VWTAG++P+ L   + GL LD  GR+   ATL  DG  S+Y LGD A++  A G   P+TAQAAMQQ+DY AWN  AA        L FRY DLG+M+SLG   GT++ALG  + L+GP A+  RRAVYA RMPT  Q      S A + AA  +  LL
Sbjct:   36 RPNVCVVGGGFGGLYTALRFASLEWKGISKPRVRLIDRSDRFAFLPMMYELTTGTASCWEVAPTFEEVLNGSGVEFVRGEVSGLDTEAKMVSVQGG-----GGELL---------LPYDQCVLALGSEASFADVLGVREFALPFYTLDDALQLREHLLARQRSTRGPPTRIVIVGGSYVGVELAANLHAKFGSQFDLTLVHRADALLTSSKEFSRLVGSQRLKESGVKVLLDTNVLRIDADGVDVCPARGSA-GSAGAPE-QRLDADMVVWTAGTKPSRLAASL-GLPLDEAGRICTDATLRVDGCSSLYALGDVASLTDARGSRPPSTAQAAMQQADYAAWNVRAALLGGPT--LAFRYADLGEMLSLGEGYGTLTALGA-INLQGPLASLTRRAVYAARMPTTKQATRVGLSWAADAAASVAKGLL 443          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A6H5JVX1_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX1_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.160e-83
Identity = 177/383 (46.21%), Postives = 235/383 (61.36%), Query Frame = 1
Query:   70 KEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRD--------LPYDDLIIALGAEPVP--DLVEGAREHALPFYTVEDAYRLQLALRALRAR-SDDAPADVVVVGGSLCGVEIAATIAGVLDSAR-------ITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDA--ETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATL-------AADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYM 1137
            + IC++GGGFGGLYTALRL K+PW    P +TL+DKRDKF FLPLLY+ A G A+L EVAPTF+ LL G+G+SFVQ  V+ IDL  K + VAGA  DDL+G  + D ADE+ D        L YD L++A+GAEP    D V GARE A+PFY++ED+YR++ A+  L+A   +   + VVVVGGS  GVE++  +A  L   R       +T+   + E+L+ A   NR AG  ++   GV V     V  V  G   V  + G      G D A  E + ADL+VWTAGS+P+ LL  ++ +  DARGR+ V   L       +A G+  VYCLGD AAV+G + +   AQ A+QQSDYVA+N  A   RR+  PL FR++
Sbjct:  100 ERICVLGGGFGGLYTALRLQKMPWRGRRPVVTLVDKRDKFTFLPLLYEFAIGNAELDEVAPTFRELLAGSGVSFVQGCVSNIDLDGKGVTVAGATSDDLDGFMVSDNADESEDILGVGARTLEYDKLVLAVGAEPASAIDKVPGARERAIPFYSIEDSYRVKQAIIKLKALVREKTVSRVVVVGGSYAGVELSCNLATELGGGRKGKGKVEVTLAAGS-EVLAMATSGNREAGLRRLAESGVHVMKGARVSEVKEGGGVVL-QQGEGKARTGTDSAGGEEIMADLLVWTAGSQPSSLLEPLD-VRKDARGRIEVDRKLRVVEAAGSAGGVGDVYCLGDIAAVEGLE-LGCNAQVALQQSDYVAYNIWADKERRK--PLDFRWV 476          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A0G4FP32_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FP32_VITBC)

HSP 1 Score: 267 bits (683), Expect = 1.520e-77
Identity = 182/425 (42.82%), Postives = 248/425 (58.35%), Query Frame = 1
Query:   55 AQKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVLDSA----RITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESV------AAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARG-RVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAAS 1296
            A+     ICIVGGGFGGL TAL L+KLPW    P ITLID +D+FVFLPLLY+LA G A+  EVAP F+ LL GTGI FV+  V +ID+  K ++V+G             A  E R+L Y  L++A+G EP    + G  E AL F  + DA +L+  ++ ++ R  D PA VV+VGG   GVE+A  +A  L S     +I+++ R P+L+  +A  NR      +R   VDV   TSV S+      +   + V+ +        G++D+  L ADL++ TAG R +GL   V G     RG R+ V  TLA  GL  VY +GD A + G +G   TAQAA QQ+DY+ WN  A+     + PL +RY  LG+M++ G  DG+++ALG+RVTL GP A+ ARR+ Y +R PT  QR  AA S
Sbjct:   94 AESSANRICIVGGGFGGLLTALGLSKLPW-KVQPEITLIDTKDQFVFLPLLYELAVGTAEQSEVAPLFRELLYGTGIRFVKGRVDSIDVDGKKLSVSG-------------AGGERRELGYGRLVLAMGGEPSAGGIPGV-ERALRFTALNDAIQLKKEIQRIK-RIRDRPARVVLVGGGYIGVELATNLAAALSSQSPPPQISLLHRGPQLMPLSAEHNRKQAIRALREARVDVSLETSVASIRPASDTSGSEVVVQKK--------GSEDSSVLPADLVIMTAGVRASGLADMVNGRVERGRGGRLAVERTLAVKGLGDVYAIGDVADLGGVEG-EGTAQAAFQQADYLVWNIWAS--YNDKKPLAYRYTKLGEMLTFGPLDGSVAALGDRVTLGGPLASIARRSAYIIRQPTPRQRLRAALS 491          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A2P8WKQ5_9CYAN (FAD-dependent oxidoreductase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WKQ5_9CYAN)

HSP 1 Score: 255 bits (652), Expect = 3.300e-77
Identity = 168/404 (41.58%), Postives = 236/404 (58.42%), Query Frame = 1
Query:   67 RKEICIVGGGFGGLYTALRLAKLPWG-NDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPT 1266
            +  +CI+GGGFGGLYTALRL+KLPW  ++TP I L+D+RD+F+F PLLY+L +G     E+AP F+ LL  TGI F QA+V +IDL  ++  ++  +                 DL YD L+IALG E   D+V GA EHA+PF  +EDAY+L+  LR L A SD     V VVGG   GVE+A  +A  L +  R+ +V R+ ++L  +   NR A    +  LGV +   T+VES+   +  +  R+            + L  D+++WT G+R N +L  +  L  ++R ++RV ATL  +G   +Y +GD A    ADG  VP TAQAA+QQ+DY  WN  A+ +   R  LPFRY  LG+M++LG+   T++ LG  + L G  A  ARR  Y  RMPT
Sbjct:    5 QSRVCILGGGFGGLYTALRLSKLPWSKSETPEIVLVDQRDRFLFSPLLYELVSGELQTWEIAPPFEELLANTGIRFHQAAVQSIDLDGRNTTLSTGV-----------------DLAYDRLVIALGGETPMDMVPGATEHAIPFRDLEDAYQLKERLRVLEA-SDQDKIRVAVVGGGYSGVELACKLAERLGERGRVRLVERSDDILQTSPEFNRNAARKVLSDLGVWIDLDTTVESIGPDSFTLVYRE----------QRDLLPVDIVLWTVGTRVNPVLDALP-LPRNSRQQIRVDATLQVEGHPDLYAVGDLADCHDADGQQVPPTAQAALQQADYAGWNIWASLQ--DRPLLPFRYQHLGEMMTLGSDRATLTGLG--IQLDGELAHVARRLAYLYRMPT 375          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: A0A7S4BRQ4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ4_CHRCT)

HSP 1 Score: 256 bits (654), Expect = 2.950e-76
Identity = 162/359 (45.13%), Postives = 221/359 (61.56%), Query Frame = 1
Query:   67 RKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADE-TRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLCGVEIAATIAGVL-DSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFR 1131
            R++IC++GGGFGGLYTAL+L+KL WG   P ITL+DK D+F FLP++Y+L  G     EVAP F+ +L G+G+ F+Q  V  +D  SK I VA                DE +R LPY+  ++ALG+E     V GAREH+ PFYT++DA +L+ AL  L  R   AP  VVVVGGS  GVE+AA +   L D   +T+V R+  LLS +   NR  G  ++R+ GV V   +SV  V    +A+ A         GA+  + L AD++VWTAGS+P+GL   + G+ +DA+GRV V + L   G D V+ LGD A+++ A G  VP+TAQ+AMQQ++Y AWN  AA R  +  PL FR
Sbjct:   52 REDICVLGGGFGGLYTALKLSKLDWGTCKPRITLVDKHDRFAFLPMMYELTTGSVSCWEVAPMFEEVLNGSGVQFLQGDVQRLDRESKLITVA--------------TGDECSRQLPYNQCVLALGSEVSYAGVAGAREHSFPFYTLDDALQLREAL--LTRRLGAAPVRVVVVGGSYIGVELAANLREWLGDKVDLTLVHRSDSLLSNSEEHNRRVGTQRLRSSGVKVLLDSSVARVTEDGVALSAN--------GAE--QQLSADIVVWTAGSKPSGLAASL-GVEVDAKGRVVVDSALRVCGCDDVHALGDVASINDASGASVPSTAQSAMQQAEYAAWNVRAALRGER--PLAFR 381          
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Match: K9XL53_9CHRO (NADH dehydrogenase n=6 Tax=Cyanobacteria TaxID=1117 RepID=K9XL53_9CHRO)

HSP 1 Score: 251 bits (642), Expect = 9.070e-76
Identity = 160/409 (39.12%), Postives = 234/409 (57.21%), Query Frame = 1
Query:   58 QKPRKEICIVGGGFGGLYTALRLAKLPWGNDTPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQASVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEPVPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPAD---VVVVGGSLCGVEIAATIAGVLDS-ARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVRTATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADG--VPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPT 1266
            Q+P + ICI+GGGFGGLYTALRL++LPW +  P I L+D+ D+F+F PLLY+L  G     E+AP F  +L GTG+ F Q SVT I++  + + +                  +  ++PYD L++ALG E   D+V GA  +A PF T++DAYRL+  LR L    +++P D   + +VGG  CGVE+A  +A  L++ ARI ++    ++L  +   NR A    + A GV +   TSV+ V   AIA+  ++            +T+  D+++WT G+R   ++R +  L  + RG++  ++TL       ++ LGD A     +G  VPATAQAA QQ+DY  WN  A+    QR  LPFRY  LG+M++LG  + T + LG  + L GP A  ARR  Y  RMPT
Sbjct:    3 QQPAR-ICILGGGFGGLYTALRLSQLPWSSQKPEIVLVDQSDRFLFSPLLYELLTGELQTWEIAPPFSEILAGTGVRFYQESVTEINIDDQRVRL-----------------QDGVEIPYDRLVLALGGETPLDMVAGATSYAFPFRTIDDAYRLEARLRRL----EESPVDKIRIAIVGGGYCGVELACKLADRLENRARIRLIEMTDQILRTSPEHNRVAANKALEARGVWIDLETSVQEVEPQAIALEYKN----------QVDTIPVDIVIWTVGTRVAPVVRSLP-LKQNQRGQLTTTSTLQVIDHPEIFALGDLADCRDVEGQQVPATAQAAFQQADYAGWNVWASLT--QRPLLPFRYQHLGEMMTLGTDNATFTGLG--IQLDGPLAYVARRLAYLYRMPT 374          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158067 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDT3_9STRA2.530e-311100.00NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
D8LG25_ECTSI3.660e-11249.11NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus... [more]
A0A7S4BRY4_CHRCT5.600e-9446.68Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0JEC2_9EUKA8.310e-8743.46Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0LKG6_9EUKA1.420e-8543.93Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6H5JVX1_9PHAE1.160e-8346.21Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A0G4FP32_VITBC1.520e-7742.82Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2P8WKQ5_9CYAN3.300e-7741.58FAD-dependent oxidoreductase n=1 Tax=filamentous c... [more]
A0A7S4BRQ4_CHRCT2.950e-7645.13Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K9XL53_9CHRO9.070e-7639.12NADH dehydrogenase n=6 Tax=Cyanobacteria TaxID=111... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:2031588..2033912 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158067|e_gw1.4.145.1
BRITEko00000,ko00001,ko01000
KEGG Pathwayko00190,map00190
KEGG koko:K03885
EC1.6.99.3
Preferred namendbB
DescriptionNADH dehydrogenase, FAD-containing subunit
COG categoryC
Max annot lvl1117|Cyanobacteria
EggNOG OGsCOG1252@1|root,COG1252@2|Bacteria,1G26A@1117|Cyanobacteria
Evalue1.49e-76
Seed ortholog1173026.Glo7428_4351
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNADH dehydrogenase (ubiquinone)
Ec32 orthologEc-21_004880.1
TranscriptId158389
TrackFilteredModels1
ProteinId158067
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158067gene_1780Tribonema minus UTEX_B_3156 geneContig_4 2031588..2033912 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1780_1exon_1780_1Tribonema minus UTEX_B_3156 exonContig_4 2031588..2031807 +
exon_1780_2exon_1780_2Tribonema minus UTEX_B_3156 exonContig_4 2032693..2033555 +
exon_1780_3exon_1780_3Tribonema minus UTEX_B_3156 exonContig_4 2033604..2033912 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1780CDS_1780Tribonema minus UTEX_B_3156 CDSContig_4 2031588..2031807 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158067Trimin1|158067|e_gw1.4.145.1Tribonema minus UTEX_B_3156 polypeptideContig_4 2031588..2033912 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1392bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGTCAGAAGCGCCAACTAGCGCCTCCGTCTATGCTGCGCAAGCTAA
AGCTGCGCAAAAGCCCAGGAAGGAGATATGCATAGTGGGGGGAGGATTCG
GCGGGCTGTACACGGCACTGCGGCTGGCGAAGCTGCCATGGGGGAATGAC
ACACCGCACATCACCCTAATCGACAAGAGGGATAAGTTTGTGTTCCTACC
TCTCTTGTACGATCTGGCAGCCGGCTACGCGGACCTCGGCGAAGTCGCCC
CCACCTTCAAGTCCCTCCTCGAGGGCACGGGCATCTCCTTCGTCCAGGCA
TCCGTCACCGCCATCGACCTGCCCTCCAAGTCCATCGCCGTCGCTGGCGC
CCTGTGCGACGACCTGAACGGCACCGCCCTCTGCGACGCCGCCGACGAGA
CGCGCGACCTGCCCTACGACGACCTCATCATCGCGCTCGGTGCGGAGCCG
GTGCCGGACCTCGTGGAGGGCGCGCGCGAGCACGCCCTCCCCTTCTACAC
GGTGGAGGACGCGTACCGGCTGCAGCTCGCCCTGCGCGCGCTGCGCGCGC
GCAGCGATGACGCGCCCGCCGACGTCGTCGTCGTGGGCGGCTCGCTGTGC
GGCGTCGAGATCGCCGCGACAATCGCCGGCGTCCTCGACAGCGCGCGCAT
CACCATGGTCACGCGCGCGCCCGAGCTGCTGAGCGCCGCCGCGCCCGCGA
ACCGCGCCGCCGGCGCCGCCAAGATGCGCGCGCTCGGCGTCGACGTGCGC
ACCGCCACCAGCGTCGAGAGCGTCGCCGCCGGCGCCATCGCCGTGCGCGC
GCGCGACGGCGGCGCCAACGGCGAGGCCGGCGCGGACGACGCGGAGACGC
TGCGCGCGGATTTAATTGTGTGGACGGCGGGGTCGCGGCCGAATGGCCTG
CTGCGCGGCGTGGAGGGGCTGTCGCTGGACGCGCGCGGGCGCGTGCGCGT
GAGCGCGACGCTCGCCGCGGACGGGCTCGACAGCGTCTACTGCCTCGGCG
ACGCGGCGGCCGTTGACGGCGCTGACGGCGTCCCCGCCACTGCGCAGGCC
GCCATGCAGCAGAGCGATTATGTGGCGTGGAACGGGGGGGCGGCGGCGCG
GCGGCGGCAGCGCGCGCCGCTGCCGTTCCGGTACATGGACCTCGGGCAGA
TGGTGTCGCTGGGCGCCGCGGATGGCACCATGAGCGCGCTGGGGGAGCGC
GTGACGCTGCGCGGACCGGCGGCGGCGGCGGCGCGGCGCGCGGTGTACGC
GCTGCGCATGCCGACGGCGCCGCAGCGCGCGGCGGCGGCGGCGTCGATCG
CGGTCAACACGGCGGCCAAGGCGTCGTCGCTGCTGCTGGACATGGGGCTA
AGCGTGCTGGACAAGCTGATGGACAAGCGGGAGCAGCGGTAG
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protein sequence of jgi.p|Trimin1|158067

>Trimin1|158067|e_gw1.4.145.1 ID=Trimin1|158067|e_gw1.4.145.1|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp
MSSEAPTSASVYAAQAKAAQKPRKEICIVGGGFGGLYTALRLAKLPWGND
TPHITLIDKRDKFVFLPLLYDLAAGYADLGEVAPTFKSLLEGTGISFVQA
SVTAIDLPSKSIAVAGALCDDLNGTALCDAADETRDLPYDDLIIALGAEP
VPDLVEGAREHALPFYTVEDAYRLQLALRALRARSDDAPADVVVVGGSLC
GVEIAATIAGVLDSARITMVTRAPELLSAAAPANRAAGAAKMRALGVDVR
TATSVESVAAGAIAVRARDGGANGEAGADDAETLRADLIVWTAGSRPNGL
LRGVEGLSLDARGRVRVSATLAADGLDSVYCLGDAAAVDGADGVPATAQA
AMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGER
VTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGL
SVLDKLMDKREQR*
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mRNA from alignment at Contig_4:2031588..2033912+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2325bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )
ATGTCGTCAGAAGCGCCAACTAGCGCCTCCGTCTATGCTGCGCAAGCTAA AGCTGCGCAAAAGCCCAGGAAGGAGATATGCATAGTGGGGGGAGGATTCG GCGGGCTGTACACGGCACTGCGGCTGGCGAAGCTGCCATGGGGGAATGAC ACACCGCACATCACCCTAATCGACAAGAGGGATAAGTTTGTGTTCCTACC TCTCTTGTACGATCTGGCAGGTGAGAAATGAAGAGCACATGTTGTGATCT TCTAACTGATGCATGAGATCAGTACAAGGATTTCAGCAGGCAAGCAAGCA CTCCTCGATTGTTGGGTTCAGAAATGCAGATTCTGCATTGCAACACTTGA TACTAAAGTCTTTGCAGACAAGCTGGTGAGCAGGTGCACTGCCTCTCTTG CTGAGTGACAATTCGTCAAGAATGGAAACTCCACGCATATATAGGAATGA CCCGGTGGCATCTGGGTCACCCCCTTCAGACCGCGATGCAACTTCTTGCA TCCGTTACTTTTTTATTGAAAGCGAGCTTGAGTGCCATGCAGCCCACATT CGTCGACGTTGGTGGCTGCTTTTGCTGTTCACAACTAGCCTGTGCATGTG GGTTGCTCAAAAATCATGAATGTAGCCGTGCACCAGTTCTGATAGTTGAT GAGCCCGCTCGTCGCCTTCATCAAACATGCAGCTGCCTATAATTTGGTGT TTGACAGCCCGTCCACATGGCTTGCAGCGAGGAACAAAAAGTGCATGATG CAGTTGTGACACTGGCATGTATGCGCATCTCACGCCCTACTGAGCGGTGT GGAATTCAATAATTCTTTTCATGTGCAGCATGCCCGAGGAGTTCACTCAG CGTCCACGCTGCCTGGCCTACCACGGTTCCTGACGCATTGCGGCGCATCT CCGTAACTGCCATGCTAGTTCACATGGAGTGTGCGCAGAGCCTCCACAGC ACTAGCTCCACGTCTCACAAACCCTCCACACCATGCTTTATCGCAAGTTC CATCACTGCCATGGCAGTCAACCACATGGGTAGCACTGCAGCTACATGTA CACTCATCTCAGCGGTCAGCCCCCCCTCACCCATGCAACCCCCTCCCCCC CTTAGCCGGCTACGCGGACCTCGGCGAAGTCGCCCCCACCTTCAAGTCCC TCCTCGAGGGCACGGGCATCTCCTTCGTCCAGGCATCCGTCACCGCCATC GACCTGCCCTCCAAGTCCATCGCCGTCGCTGGCGCCCTGTGCGACGACCT GAACGGCACCGCCCTCTGCGACGCCGCCGACGAGACGCGCGACCTGCCCT ACGACGACCTCATCATCGCGCTCGGTGCGGAGCCGGTGCCGGACCTCGTG GAGGGCGCGCGCGAGCACGCCCTCCCCTTCTACACGGTGGAGGACGCGTA CCGGCTGCAGCTCGCCCTGCGCGCGCTGCGCGCGCGCAGCGATGACGCGC CCGCCGACGTCGTCGTCGTGGGCGGCTCGCTGTGCGGCGTCGAGATCGCC GCGACAATCGCCGGCGTCCTCGACAGCGCGCGCATCACCATGGTCACGCG CGCGCCCGAGCTGCTGAGCGCCGCCGCGCCCGCGAACCGCGCCGCCGGCG CCGCCAAGATGCGCGCGCTCGGCGTCGACGTGCGCACCGCCACCAGCGTC GAGAGCGTCGCCGCCGGCGCCATCGCCGTGCGCGCGCGCGACGGCGGCGC CAACGGCGAGGCCGGCGCGGACGACGCGGAGACGCTGCGCGCGGATTTAA TTGTGTGGACGGCGGGGTCGCGGCCGAATGGCCTGCTGCGCGGCGTGGAG GGGCTGTCGCTGGACGCGCGCGGGCGCGTGCGCGTGAGCGCGACGCTCGC CGCGGACGGGCTCGACAGCGTCTACTGCCTCGGCGACGCGGCGGCCGTTG ACGGCGCTGACGGCGTCCCCGCCACTGCGCAGGCCGCCATGCAGCAGAGC GATTATGTGGCGTGGAACGTGTGGGCGGCGGCGACGGCGGCGGCGGCTGC GGAGGGGGGGGAGGAGGGGGGGGCGGCGGCGCGGCGGCGGCAGCGCGCGC CGCTGCCGTTCCGGTACATGGACCTCGGGCAGATGGTGTCGCTGGGCGCC GCGGATGGCACCATGAGCGCGCTGGGGGAGCGCGTGACGCTGCGCGGACC GGCGGCGGCGGCGGCGCGGCGCGCGGTGTACGCGCTGCGCATGCCGACGG CGCCGCAGCGCGCGGCGGCGGCGGCGTCGATCGCGGTCAACACGGCGGCC AAGGCGTCGTCGCTGCTGCTGGACATGGGGCTAAGCGTGCTGGACAAGCT GATGGACAAGCGGGAGCAGCGGTAG
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Coding sequence (CDS) from alignment at Contig_4:2031588..2033912+

>mRNA_1780 ID=mRNA_1780|Name=jgi.p|Trimin1|158067|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_4:2031588..2033912+ (Tribonema minus UTEX_B_3156 )
ATGTCGTCAGAAGCGCCAACTAGCGCCTCCGTCTATGCTGCGCAAGCTAA
AGCTGCGCAAAAGCCCAGGAAGGAGATATGCATAGTGGGGGGAGGATTCG
GCGGGCTGTACACGGCACTGCGGCTGGCGAAGCTGCCATGGGGGAATGAC
ACACCGCACATCACCCTAATCGACAAGAGGGATAAGTTTGTGTTCCTACC
TCTCTTGTACGATCTGGCAGCCGGCTACGCGGACCTCGGCGAAGTCGCCC
CCACCTTCAAGTCCCTCCTCGAGGGCACGGGCATCTCCTTCGTCCAGGCA
TCCGTCACCGCCATCGACCTGCCCTCCAAGTCCATCGCCGTCGCTGGCGC
CCTGTGCGACGACCTGAACGGCACCGCCCTCTGCGACGCCGCCGACGAGA
CGCGCGACCTGCCCTACGACGACCTCATCATCGCGCTCGGTGCGGAGCCG
GTGCCGGACCTCGTGGAGGGCGCGCGCGAGCACGCCCTCCCCTTCTACAC
GGTGGAGGACGCGTACCGGCTGCAGCTCGCCCTGCGCGCGCTGCGCGCGC
GCAGCGATGACGCGCCCGCCGACGTCGTCGTCGTGGGCGGCTCGCTGTGC
GGCGTCGAGATCGCCGCGACAATCGCCGGCGTCCTCGACAGCGCGCGCAT
CACCATGGTCACGCGCGCGCCCGAGCTGCTGAGCGCCGCCGCGCCCGCGA
ACCGCGCCGCCGGCGCCGCCAAGATGCGCGCGCTCGGCGTCGACGTGCGC
ACCGCCACCAGCGTCGAGAGCGTCGCCGCCGGCGCCATCGCCGTGCGCGC
GCGCGACGGCGGCGCCAACGGCGAGGCCGGCGCGGACGACGCGGAGACGC
TGCGCGCGGATTTAATTGTGTGGACGGCGGGGTCGCGGCCGAATGGCCTG
CTGCGCGGCGTGGAGGGGCTGTCGCTGGACGCGCGCGGGCGCGTGCGCGT
GAGCGCGACGCTCGCCGCGGACGGGCTCGACAGCGTCTACTGCCTCGGCG
ACGCGGCGGCCGTTGACGGCGCTGACGGCGTCCCCGCCACTGCGCAGGCC
GCCATGCAGCAGAGCGATTATGTGGCGTGGAACGGGGGGGCGGCGGCGCG
GCGGCGGCAGCGCGCGCCGCTGCCGTTCCGGTACATGGACCTCGGGCAGA
TGGTGTCGCTGGGCGCCGCGGATGGCACCATGAGCGCGCTGGGGGAGCGC
GTGACGCTGCGCGGACCGGCGGCGGCGGCGGCGCGGCGCGCGGTGTACGC
GCTGCGCATGCCGACGGCGCCGCAGCGCGCGGCGGCGGCGGCGTCGATCG
CGGTCAACACGGCGGCCAAGGCGTCGTCGCTGCTGCTGGACATGGGGCTA
AGCGTGCTGGACAAGCTGATGGACAAGCGGGAGCAGCGGTAG
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