mRNA_17557 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354296
Unique Name	mRNA_17557
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|354296 vs. uniprot
Match: A0A835Z816_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z816_9STRA)

HSP 1 Score: 1213 bits (3139), Expect = 0.000e+0
Identity = 1040/1040 (100.00%), Postives = 1040/1040 (100.00%), Query Frame = 1

Query:    1 MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL 3120
            MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL
Sbjct:    1 MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL 1040

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354296 vs. uniprot

BLAST of jgi.p|Trimin1|354296 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z816_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_227	contig	Contig_227:17417..25284 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354296\|estExt_Genemark1.C_Ctg_2270004
Hectar predicted targeting category	other localisation
TranscriptId	354618
Track	FilteredModels1
ProteinId	354296

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354296	gene_17557	Tribonema minus UTEX_B_3156	gene	Contig_227 17417..25284 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354296	Trimin1\|354296\|estExt_Genemark1.C_Ctg_2270004	Tribonema minus UTEX_B_3156	polypeptide	Contig_227 17417..25284 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17557_1	exon_17557_1	Tribonema minus UTEX_B_3156	exon	Contig_227 17417..17500 +
exon_17557_2	exon_17557_2	Tribonema minus UTEX_B_3156	exon	Contig_227 17618..18036 +
exon_17557_3	exon_17557_3	Tribonema minus UTEX_B_3156	exon	Contig_227 18818..19198 +
exon_17557_4	exon_17557_4	Tribonema minus UTEX_B_3156	exon	Contig_227 20334..20394 +
exon_17557_5	exon_17557_5	Tribonema minus UTEX_B_3156	exon	Contig_227 21103..21300 +
exon_17557_6	exon_17557_6	Tribonema minus UTEX_B_3156	exon	Contig_227 22152..22898 +
exon_17557_7	exon_17557_7	Tribonema minus UTEX_B_3156	exon	Contig_227 23046..23111 +
exon_17557_8	exon_17557_8	Tribonema minus UTEX_B_3156	exon	Contig_227 23416..23583 +
exon_17557_9	exon_17557_9	Tribonema minus UTEX_B_3156	exon	Contig_227 24286..25284 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17557	CDS_17557	Tribonema minus UTEX_B_3156	CDS	Contig_227 17417..17500 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_227:17417..25284+
coding sequence from alignment at Contig_227:17417..25284+

spliced messenger RNA

>mRNA_17557 ID=mRNA_17557|Name=jgi.p|Trimin1|354296|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3123bp|location=Sequence derived from alignment at Contig_227:17417..25284+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCGCTCTGGATGGACTGTCATCGCCGTGGCCACAAAGGAGACGCA
GGCCGGCCAGCCGCCTCGCTCGAAAAGCAACACCCGCCAGCGGGAACACC
AGCAGCAGGCGTCTCGGCCTGTGCTGTCGTCGACCTCAGCATCGAACTCG
GCAGCACGGCAGTGTGACAGCGATGCCAGGTACTTCTCACAGGACACCGG
CTGTTACTACTGCAGCCAATACTTCGACGAGGAAGAAGAGGACCAGCTCT
TGCAGCAACACGAGCAGAAGAGGCGAGCTGCTGCACCACAAGGAGACGCA
GAGCTCCCGCCTAAGCAACACCGGCACCAGCACCAGCACGTGTCGATAGC
CGAGCCGCACCAGCATAAACTGGAGGCCTTCTGCGATCGACGGCGCAGCA
GCAGCAGCAGCGGCGTGGCTCTGGAGGAGGGCGTCCTTATGGACAGGAGG
CCGCCGTTGATCGTGGAGCTGCACCCCTGCCACTGGAAGATTCGCACCCC
CAGCGCCGACTTTGCGGCGACGGTGCACCCGCGCCGCGCCGCCGCCGGCG
CGCTGCAGTATGGCCGCGGCGCGCGGTGCGTGCTGCTCGCGCTCGAGACG
CGCCGCCTGCCGCGCGAGCTGCTGTGGGCCGCGCCGGAGGCGGCGCACTG
CGCGGGCGGGCGCGGCGGCATCGAGGTGGAGCTGCGGGACCTGCGCGGCG
CGCCGCCGCCGCAGCGCGCGGGCAGCGGCGGCGACGGCGGCGGCGGCGGC
TTCGACGCGGCGCACGAGACCTGGCGTGACGGCTTTGGCGCTGCAGCGGA
AGCGGAGGGGGAGGGCTGCGGCAGGGGCGATGTGCGGCATCTGGAGGCAC
GGCTCAGTAACGGGCGGCTGCTGCTGGGGCTGAGGAGGTGCATCGCCGCC
GCCATGAGAGCGGGCAAGGGTGGCAAAAGTGCTCAACCGTTCCAGGGCGC
GCTGGACGGCAGCAGCGACGTGCTGCCCGCTCTCGACAAGCTCTTCGGCC
AGGACGCGGCGGCGGCGGCGGCACAGCTTGCGGCGGCGGAGGCGGCGGCG
CTCGCAGCGCTGGAGCCTGCTGACGCGCTGCGCCTGGACCCGAGCCCCGC
GGCGACGGCGGCGGAGTGGTCAGCGCGGCTCAGCGCCGCAGAGGACGCCG
CGCAGGCCATCGCGGCGCGGCGCCGCGCGTGGCACTACGCAGCGCTTGAG
CACGCCGCAGCGCTGCACGTGGAGGACGGCGCAGCCGACGCTGCCGCCGC
CGCTGCCAGCCTCGCCACCGCGACACCGGAAGCCACGGCGTCGGGCGCCG
CCGCCGCCGCCGTCAGCGACGCGCAAGCGGCGGCGGAGGAGGACGGCGGA
GAGCTGTTTGCGCTGACGGCGGCGGAGCGCGCAGCGATGCCGCCGGCGGT
GCTCGCGCGCCTGCGCGCGCAGCACGCGCTGGTGCTGGCGGCGTTCCGCA
GCCCCGCGGACGCAGCGGCGGCGGCCGCGGCGCTGCTGCCGCTTCCCAGC
GCCGCCACCGCGGCGTCGCCGCATGTCGACAGCCTCGATGCCACAGGGGC
GGCGGCAGCGGCGGCGGTGGGCGCTGTGGTGAAGGCTGAACACGAGCAGC
CGTTCTCAACAGGTGCCTCGGCGGCGCCCAACATGGAGCGTCGCCGCGCG
TCATTACGCGCGGCCGCAGCGGAAGCAGCAGCGGTGGGCCCGCTGGCGGG
CGGCAGTGGCGGTGTGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGCTGG
GGCGCGGGCGCCTGCGCGCGGCGGCTTTGTTTGCGGACGCGGCGCACGCG
GTGGAGGCCCACGCCGCGTGCGCCGCCGCCGCCAGCTTTGCGCTGCTGGT
GCAGCTGCAGGCCGTCAAGCGCGCCGCGCCGGTGGAGCAGGCTGCGCTCC
GATGCGGTGCCGGGCGCGCGTTGGACGGCGCAGGCGTGCGCGCCGGCGCG
GCGCGCCCGCCGATGGGCCCGGGACTGCTGCCGTCGCGCGTGGTGAACGC
GCACCGCATCGCGCGCACGCTCCCGCCGCCGCCGCCGCGCACGCCGCCGC
CGGAGGCAGCGATCCGCGGCGGCGACGCCGCGCTGCCCATGCCGCGCTGG
GTGCCCGATGCCGCCGCCGAGGGGGGCTTCAGGGCTGAAATCGAGAGACC
AGATGGGCTGCCAGATGACGAAGCGACTGAGGCGGCAGTGGTGCAGGAGC
AGGAGCAGCAGCAGCAGCAGCAGCATGAACGGCGCGCCAGTCTGGAGCTA
GAGCAGCAGCGCGTGCTGCAGCAGCAGCAACAGCAGCATGAGCTTCAGCA
GCAGCAGCTGCTGCACAAGCAGCGGCAGCTTCAGCAGCAGCAGCAGCAGC
GGAAGCTGGCACAGCAGGCTCAGCTGCAGGCACAACAGCAGGCACAGCAG
CACGTAGAACAGCAGGCGCAACAGCAGCAGCAGCAGCAGCAGCAGAGGAA
GCAGCAGCTGGCTGCAATGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAAA
TGCGTCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCACAGCTGCACAA
CAGCAACAGCAGCAGCAGCAGCAGCAGTCACACGGCGGCGCTGTCCACAC
TCCGCGCCACCGCTACGAGGCGCAGTCCCACATGCTGCAGCAGCAGCAGC
AGCTCAAGCACCTGCAGCAGCAGCAGGCGGCAGCGGCGCAGATCCAGATG
CTGCAGCAGCAGCTGGCGCTGCAGCAGGCGCAGGCACAGCTTCGGCAGCA
GCAGCAGGTGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGGCACGGCGG
CAACGGTGGCGGGACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGTC
CAGGCCGCGCAGCTGGCGGCGCTGCGGCAGTCGCAGCAGCTGCAGCGGCT
GCAGTTTGCGCGCATGCAGCAGCAGCAGCAGCTGGGGGGCTTCGCGCCGC
CGATGGGCAGCCCGCCCGGTCAAGCGAGCTTGCAGCAGCAGCAGCAGCAG
CAGCAAGGCGTAGACGCGGGAGGGAACCCCCTGCAGCACGCTTCAGCCGC
GCTGGCCTCCGTTGGCAGCGCCAACGTGCTTCCCAACGGCGGCTTGAACG
GCGCCGGCGGAGGCTGGCTGTAG

protein sequence of jgi.p|Trimin1|354296

>Trimin1|354296|estExt_Genemark1.C_Ctg_2270004 ID=Trimin1|354296|estExt_Genemark1.C_Ctg_2270004|Name=jgi.p|Trimin1|354296|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1041bp
MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNS
AARQCDSDARYFSQDTGCYYCSQYFDEEEEDQLLQQHEQKRRAAAPQGDA
ELPPKQHRHQHQHVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRR
PPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALET
RRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRAGSGGDGGGGG
FDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAA
AMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLAAAEAAA
LAALEPADALRLDPSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALE
HAAALHVEDGAADAAAAAASLATATPEATASGAAAAAVSDAQAAAEEDGG
ELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAAAAALLPLPS
AATAASPHVDSLDATGAAAAAAVGAVVKAEHEQPFSTGASAAPNMERRRA
SLRAAAAEAAAVGPLAGGSGGVAAAAAAAAAALGRGRLRAAALFADAAHA
VEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGA
ARPPMGPGLLPSRVVNAHRIARTLPPPPPRTPPPEAAIRGGDAALPMPRW
VPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEQEQQQQQQHERRASLEL
EQQRVLQQQQQQHELQQQQLLHKQRQLQQQQQQRKLAQQAQLQAQQQAQQ
HVEQQAQQQQQQQQQRKQQLAAMRQQQQQQQQQMRQQQQQQQQLLRTAAQ
QQQQQQQQQSHGGAVHTPRHRYEAQSHMLQQQQQLKHLQQQQAAAAQIQM
LQQQLALQQAQAQLRQQQQVQQQQQQQQQYGTAATVAGQQQQQQQQQQQV
QAAQLAALRQSQQLQRLQFARMQQQQQLGGFAPPMGSPPGQASLQQQQQQ
QQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL*

mRNA from alignment at Contig_227:17417..25284+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17557 ID=mRNA_17557|Name=jgi.p|Trimin1|354296|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7868bp|location=Sequence derived from alignment at Contig_227:17417..25284+ (Tribonema minus UTEX_B_3156 )
ATGGCGCGCTCTGGATGGACTGTCATCGCCGTGGCCACAAAGGAGACGCA
GGCCGGCCAGCCGCCTCGCTCGAAAAGCAACACCGTGAGCTTCAGCCTGA
AGCAGAGCAAACCAGCAACAATTGTTGGGGATGGCCGCTCATCCAGCAAG
GGCAGTCGTCAAACGATGTCACGAAAGCGACCGCGCCCTCCATCGCCCGA
GCGCCAGCGGGAACACCAGCAGCAGGCGTCTCGGCCTGTGCTGTCGTCGA
CCTCAGCATCGAACTCGGCAGCACGGCAGTGTGACAGCGATGCCAGGTAC
TTCTCACAGGACACCGGCTGTTACTACTGCAGCCAATACTTCGACGAGGA
AGAAGAGGACCAGCTCTTGCAGCAACACGAGCAGAAGAGGCGAGCTGCTG
CACCACAAGGAGACGCAGAGCTCCCGCCTAAGCAACACCGGCACCAGCAC
CAGCACGTGTCGATAGCCGAGCCGCACCAGCATAAACTGGAGGCCTTCTG
CGATCGACGGCGCAGCAGCAGCAGCAGCGGCGTGGCTCTGGAGGAGGGCG
TCCTTATGGACAGGAGGCCGCCGTTGATCGTGGAGCTGCACCCCTGCCAC
TGGAAGATTCGCACCCCCAGGTACGCTCACCTCAACATGCTGGCGCGCCA
GGCTCGCCAGATGACGTTGTCTCAGGCAGTGTGTGCATACGAACGGTGCG
TACTGCAGTGCAGCAGGTCAGTCGGCCTGCATCAGGTTGCCGTGCCCAAG
GAGCAGCGCATGCCAGTCTGACGATAACTGTGTGCTGACTCTAACCTTAA
GTGTTCCGCTGCGTTGGAGCCATCCTGAGTCAAACAGCTGCGGTTTGGTC
GCCCTTGGCATCGGGAGTGAGCTATTGCACTTGCACCAACACATCCATCA
CAGCCACTGTGCTCAGAGTGCCTGTCACTGGCACTGCTGCGACAGCGCAT
GCGGCGGGTCGGACGGGCCGTGCAAACGCGCTCGGCTTTGCGCCTGCCGC
CACTCAATGGCCGGTCCTGGCAGATGCCGTTTCGGACGCATCAGATGTCT
GCGGCGCTGCCTCGCCATTTCGCTGTGTGGCTGTGCGTCGCGTCAACCAC
CCCTGCTGCCAGCAGGTCCCGACTTGTGTGTCAGCTAGCCTGCGGCGCTC
GCTCGCGCCCAACGCTGAGCTCGTGCAGCTCTGCTGCAGCACTGCAACCT
TGCTATGCACACCAGCCCACCCGCGCCTCGCGGCATACCCCTGCGGCCTG
AAATCACCCTCACTGCTGCAGCCCGCCACGTTTTTCGGAGCCCGATCGCA
CGCCCCTCCCGCGCATCTGACTCCTCCCCTCTACACGCGCGCCCCCTCCC
CCCCCCCCCCCCCCCCCCCCGCCCCCTGCGCGCGTCCGTCCCCACGCGCA
GCGCCGACTTTGCGGCGACGGTGCACCCGCGCCGCGCCGCCGCCGGCGCG
CTGCAGTATGGCCGCGGCGCGCGGTGCGTGCTGCTCGCGCTCGAGACGCG
CCGCCTGCCGCGCGAGCTGCTGTGGGCCGCGCCGGAGGCGGCGCACTGCG
CGGGCGGGCGCGGCGGCATCGAGGTGGAGCTGCGGGACCTGCGCGGCGCG
CCGCCGCCGCAGCGCGCGGGCAGCGGCGGCGACGGCGGCGGCGGCGGCTT
CGACGCGGCGCACGAGACCTGGCGTGACGGCTTTGGCGCTGCAGCGGAAG
CGGAGGGGGAGGGCTGCGGCAGGGGCGATGTGCGGCATCTGGAGGCACGG
CTCAGTAACGGGCGGCTGCTGCTGGGGCTGAGGTGCGTGCGCCAGCGATG
GTGATGTGTCATTTGTGTGTGCCGTCGAGGGGTCCTCGGCGTTTCAGAGC
TCGCGAAGCAACAACCGGAGTGCAGCCAGCAGGTCGGGCGGCGCGCGCTG
CGCCGCTGTTTGCCTGCAGCGCAGACAGCAGCTGCTGCTGCACGACACGC
GCAGCCACGGCGCACCGCGACGTCAGCGAGCAATGCAGCTGCACTCATAC
GGTCGCTGCAGTGTCTGCCGTCGTCCGTGTGCTGTTTGCGCGCTACTTGA
CTGCAGCGCCGCGCGTTGAGCGCGGATGTGTAGGACGGCAAGCGCACCGG
GCGGCGCTTAGGCAGTGGGCTCGTATGTCGGGCAGCCCGCACCTCCAGTA
CGTAATGACAATGACAGTAGAGGAAAACAGCAGACGTGCTTAAACCCTGC
AACTCAAAGGGAGGCGTCAGGGCGGCGTCTTGACCGCAGCGTGAGGGCCG
CGCCAACGCCGCGCGCAGCAGCAGCGTGCGGCGTCCACGGGCGTCAGGAT
TAGAAGTGGGGTCGAGGGTGGACAGCGCTCCGAGGATGCAGGCATGCTGC
GTACGCGACAGCGCAAGGAAGCGCCCGCTCACGCGTTGCGCCGACCGCAC
TGCCTCCTGAGGCAGCTGCGTATTCCCTTGCTGCGCGCAGGGCGCAACAG
CATGGGGGGATGCGGTCGCATCAGCGGCGCCTGACCCCGCTCGACTCTCA
GCTCCAGCAGCAGCAGCAGTGAGGCTCTGCAGGGATCGACGCTGATGATA
CATGTCACAGCACGCGGATTCGAAGCCCACGGCAGGCTCGTCGCGAGCAG
CCCCATGTGTCCTGACCTATGGCAGCTGACCAGATGATGCGCGCGATGTG
TGTCCAGTTGGCTGAGCGATGCTGCAAGGTACTTCAAGTTGAAGATATGA
AACCAGCGTCAGCAGGGCGTCACAGGTTTGACCTCTTGCGAGTCACGCCT
GCTGCCTTCACGTGCCAAGGTTTTCCTGCGCCCGCGCGAAGCGAAACTGC
CGTCAAGAGGCGCCAGTCTCGTCGCGCATGCCAGACCCATTTCCCAATTT
TTAACCTCAACTTCTCACGATCCGCCGTCCCATCGCAACCCCCTGCTGCG
CCCCCTGTGCCGTGCAGGAGGTGCATCGCCGCCGCCATGAGAGCGGGCAA
GGGTGGCAAAAGTGCTCAACCGTTCCAGGTGAGAATTGCGCTGTCTACGC
TGCCAGCACGCGCTCCCCGAGCCCGCTAGGTGCACAGAAGTGATTTGCGT
ATGCTCGCCTGGTAGCAGTAATCTTGCGGAAGGAGGGGGAGGCGGGAGGG
CGGGTGGCGCGTGCATGCGCATCGCCGTGTGCTAGCTGACGCTTGCGCCG
GGAAGGTGGCGGCAGCAGCAGCAGGCGCGCGCAGGTGCTCAGGGGACACG
TGCTTGAGCGACGATAGCTGCACGCGCCCGCACATGCGGTGTACTGAGGC
AGGTGACGTTGATATACTTAGCACCACTCAGGAGAAGGTACCGTAGATTG
CACCGGCAGCACCACAGTGAGGCCAGGGCGCCACAAGTGCCGCCGCCGCT
GAGCGGGCACGGGCCTCCACGGCAGCAGCAGGCGCTGCTGCTGCACGTCG
GGGGCGGCGCCGGCGCGTCTTCTAGCGGCGCTGCTGCCTCGCCCATGCCG
CAACGCTGAGCGTCAGCGCTACTTCGCATCGCTGGTTCTGATGGTGCGTG
CAACAGCTCAGTCGAGTGCTGCCTTCTGTGGGCCCGCACGCTCGGTATGC
GTGCGGCAGCGGCGGCGACGCAGCCGCGCGCGCCGCCGCTTGCGACGCCA
GCAGCGTCGCGCAGGCGCGCCGCCGGTAGCATGGCTTGCTGCGTCATCTG
CTCACCATTGCCTCGCCTCACGCATCTGCACGTCAGGGCGCGCTGGACGG
CAGCAGCGACGTGCTGCCCGCTCTCGACAAGCTCTTCGGCCAGGACGCGG
CGGCGGCGGCGGCACAGCTTGCGGCGGCGGAGGCGGCGGCGCTCGCAGCG
CTGGAGCCTGCTGACGCGCTGCGCCTGGACCCGAGCCCCGCGGCGACGGC
GGCGGAGTGGTCAGCGCGGCTCAGCGCCGCAGAGGTGCGTCATCGCGTGA
AGTATTGAAGTTAAACACACGCTGCGTGGCTTGAGCGGGCAGGTACGCAT
GCATCATGGGCGAGGGACGGTCGTGATGCTCTGAGGGCTTCTGGCGTACG
CCCCGAAAGGTACGTGCAGGAGGACATAGCGTGTGCGCACGTACCAGCGA
ACCCGACTGACTCGGCTCTTGGACTGCATGAGCGGGCAGCGAACGCTGGC
ACGCGTTGCTGCTATTCGCCGCAAGGCACAACCTTTGGGCGCCCTACACG
GATGTGGGCGCGGGTCGGCGCGGCAATTCATGACCGTGACACCATGTCAT
CCTCCTCTGCCGGAGCGGCGCTGCTGAGAGCGGGCGGCGAGCGCGCGCGT
CGGAGGCGCTGCTGCATCTGAGCGCCAGCGGTGCCGGCGCGCAATCTTCG
CAAGCGCTGTGTTGGGTGCAGGTTGGGGGGGGGGGGGGGGCTGTCGCACC
CCTTGTCGCTCACGCCGCGCGCCGATCACAAGGACCGCAGCGCGCAGCAG
ACCGCCCCCCTTCACTGACGCGGCTGCGCTCCCCGCTGCTCAGCGCGCGA
GTGTCCTGGCACGCCCGCGCGCCACCTGCGCTCGCCGATTCTGCGTCCTG
CCCCACTTGTCGTCCGCTCCTCGCACCTGTGACGTTGCCGCGCCGAAGCG
CCGCCCGCACGATCCGCAGGCTCGCTGACCGCGCCGCGCGTTTCCGTCAG
GCGGCACTGCGCGGAGATCTACTAGCGTCCGTTGATCTCGCCGCGGCCGC
CTTGCACGCTGCCGCCACCTGCGTGTGTGTGATGCCGCTGTGGACGCAGC
CAAACTCACTGCCCCTGTGCTGCTGCGCTCCGCAGGACGCCGCGCAGGCC
ATCGCGGCGCGGCGCCGCGCGTGGCACTACGCAGCGCTTGAGCACGCCGC
AGCGCTGCACGTGGAGGACGGCGCAGCCGACGCTGCCGCCGCCGCTGCCA
GCCTCGCCACCGCGACACCGGAAGCCACGGCGTCGGGCGCCGCCGCCGCC
GCCGTCAGCGACGCGCAAGCGGCGGCGGAGGAGGACGGCGGAGAGCTGTT
TGCGCTGACGGCGGCGGAGCGCGCAGCGATGCCGCCGGCGGTGCTCGCGC
GCCTGCGCGCGCAGCACGCGCTGGTGCTGGCGGCGTTCCGCAGCCCCGCG
GACGCAGCGGCGGCGGCCGCGGCGCTGCTGCCGCTTCCCAGCGCCGCCAC
CGCGGCGTCGCCGCATGTCGACAGCCTCGATGCCACAGGGGCGGCGGCAG
CGGCGGCGGTGGGCGCTGTGGTGAAGGCTGAACACGAGCAGCCGTTCTCA
ACAGGTGCCTCGGCGGCGCCCAACATGGAGCGTCGCCGCGCGTCATTACG
CGCGGCCGCAGCGGAAGCAGCAGCGGTGGGCCCGCTGGCGGGCGGCAGTG
GCGGTGTGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGCTGGGGCGCGGG
CGCCTGCGCGCGGCGGCTTTGTTTGCGGACGCGGCGCACGCGGTGGAGGC
CCACGCCGCGTGCGCCGCCGCCGCCAGCTTTGCGCTGCTGGTGCAGCTGC
AGGCCGTCAAGCGCGCCGCGCCGGTGGAGCAGGTGCGCGCCCCCGCGCGG
CAGCGCGCGGCGCATGCTGTGCCACCGCTCGCACGGTGTGGCGTTCTGCT
GCTGCGGGCAGCAGCAACGCGCCGCCTGGCAGGCCCCTGCAAGCACGTGT
CTTGTATGATGCCACGCGCTCTGCAGCAGGCTGCGCTCCGATGCGGTGCC
GGGCGCGCGTTGGACGGCGCAGGCGTGCGCGCCGGCGCGGCGCGCGTGCG
CTTGCGCTGCACATGTGCCACTGTCGATAGCGTGGTCGGTACACCTCAAA
GTCGTGGTACTTGGGTAGTCCTTGCGCGCCGTCCCGCTACGACAGCCTTA
ATCATCAGCTGCCACGCACATGGCTTGATGTACGCTGCGCTCCGAGGCCG
CAATCTGCAGTAGCAACCGCCGACGCCGCCTCCGCGGCAGCCTTAACACC
GCTCCGCACGCGAGGCTCCTGCTGTTGCGCTGCAGTCGAGTATCTCATGC
CACTGCCGCGTCCGCCTCCCGTCCTACCCTTCTCACGTGCCGCGCGCAGC
CGCCGATGGGCCCGGGACTGCTGCCGTCGCGCGTGGTGAACGCGCACCGC
ATCGCGCGCACGCTCCCGCCGCCGCCGCCGCGCACGCCGCCGCCGGAGGC
AGCGATCCGCGGCGGCGACGCCGCGCTGCCCATGCCGCGCTGGGTGCCCG
ATGCCGCCGCCGAGGGGGTGAGTGACTCTCTCCCGCAGCACCAGTTTTGA
TGAAGGGGTGCAGAGCAGTGAACGATTCGATGTTTGCGTCGCTGTGTCAG
GAGTCCGGGCGCGGTCCTGGTTTCAGCTGTTGATGATGTTCCTGTTGCAC
AAGCGTTCTATATGGCGTCGCTTCCAGGGAGCGCAGCGCCGCTTTCACGC
GTGAGCTGCGGCGCGCTGAACTGGTCGCAGCGCTCACAAGGCTGTGCTGT
ACTGGTGGTAGACTGCTGCGTGGGGCAGCGCTCAAACAGGGCTGGCATGG
CGCTTGCTTGCTGCACAGCCGCGCGCCATAGGACTGCCTCTGTGACGCGC
CAGGCGGCGTTGCTCTTGACGGAAGTGACGCTCCGCGCTTGGACGCGTGC
GTAGCGCTCTGTCATGCGTGCAGATATAACGTACTTTGAAGTACATGCGT
ATGTGAATGCTCTTTCTTCTGACACACGGACGTTCCGGGGCAGGTGTGCG
GCGCCGCTGCACACTCACTGCACGTGTGTTTTCAATCGCGGGCGTGCTGG
CGTGCAAACCTTAAACCTGTCCCTACGCACGGGATGCGACAGAGGCCCAG
CCACCCTGCAGTAGGCCAGCCTGCGGTTGCTGTGCCCACCATGACACATG
TCGCAGCGCATGATGTGCTGTTCCCGCACTGTGTCTGGCCCTTTGCGTAC
TGCGCTCTTACTGCTTCAGGGCTTCAGGGCTGAAATCGAGAGACCAGATG
GGCTGCCAGATGACGAAGCGACTGAGGCGGCAGTGGTGCAGGAGCAGGAG
CAGCAGCAGCAGCAGCAGCATGAACGGCGCGCCAGTCTGGAGCTAGAGCA
GCAGCGCGTGCTGCAGCAGCAGCAACAGCAGCATGAGCTTCAGCAGCAGC
AGCTGCTGCACAAGCAGCGGCAGCTTCAGCAGCAGCAGCAGCAGCGGAAG
CTGGCACAGCAGGCTCAGCTGCAGGCACAACAGCAGGCACAGCAGCACGT
AGAACAGCAGGCGCAACAGCAGCAGCAGCAGCAGCAGCAGAGGAAGCAGC
AGCTGGCTGCAATGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAAATGCGT
CAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCACAGCTGCACAACAGCA
ACAGCAGCAGCAGCAGCAGCAGTCACACGGCGGCGCTGTCCACACTCCGC
GCCACCGCTACGAGGCGCAGTCCCACATGCTGCAGCAGCAGCAGCAGCTC
AAGCACCTGCAGCAGCAGCAGGCGGCAGCGGCGCAGATCCAGATGCTGCA
GCAGCAGCTGGCGCTGCAGCAGGCGCAGGCACAGCTTCGGCAGCAGCAGC
AGGTGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGGCACGGCGGCAACG
GTGGCGGGACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGTCCAGGC
CGCGCAGCTGGCGGCGCTGCGGCAGTCGCAGCAGCTGCAGCGGCTGCAGT
TTGCGCGCATGCAGCAGCAGCAGCAGCTGGGGGGCTTCGCGCCGCCGATG
GGCAGCCCGCCCGGTCAAGCGAGCTTGCAGCAGCAGCAGCAGCAGCAGCA
AGGCGTAGACGCGGGAGGGAACCCCCTGCAGCACGCTTCAGCCGCGCTGG
CCTCCGTTGGCAGCGCCAACGTGCTTCCCAACGGCGGCTTGAACGGCGCC
GGCGGAGGCTGGCTGTAG

Coding sequence (CDS) from alignment at Contig_227:17417..25284+

>mRNA_17557 ID=mRNA_17557|Name=jgi.p|Trimin1|354296|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3123bp|location=Sequence derived from alignment at Contig_227:17417..25284+ (Tribonema minus UTEX_B_3156 )
ATGGCGCGCTCTGGATGGACTGTCATCGCCGTGGCCACAAAGGAGACGCA
GGCCGGCCAGCCGCCTCGCTCGAAAAGCAACACCCGCCAGCGGGAACACC
AGCAGCAGGCGTCTCGGCCTGTGCTGTCGTCGACCTCAGCATCGAACTCG
GCAGCACGGCAGTGTGACAGCGATGCCAGGTACTTCTCACAGGACACCGG
CTGTTACTACTGCAGCCAATACTTCGACGAGGAAGAAGAGGACCAGCTCT
TGCAGCAACACGAGCAGAAGAGGCGAGCTGCTGCACCACAAGGAGACGCA
GAGCTCCCGCCTAAGCAACACCGGCACCAGCACCAGCACGTGTCGATAGC
CGAGCCGCACCAGCATAAACTGGAGGCCTTCTGCGATCGACGGCGCAGCA
GCAGCAGCAGCGGCGTGGCTCTGGAGGAGGGCGTCCTTATGGACAGGAGG
CCGCCGTTGATCGTGGAGCTGCACCCCTGCCACTGGAAGATTCGCACCCC
CAGCGCCGACTTTGCGGCGACGGTGCACCCGCGCCGCGCCGCCGCCGGCG
CGCTGCAGTATGGCCGCGGCGCGCGGTGCGTGCTGCTCGCGCTCGAGACG
CGCCGCCTGCCGCGCGAGCTGCTGTGGGCCGCGCCGGAGGCGGCGCACTG
CGCGGGCGGGCGCGGCGGCATCGAGGTGGAGCTGCGGGACCTGCGCGGCG
CGCCGCCGCCGCAGCGCGCGGGCAGCGGCGGCGACGGCGGCGGCGGCGGC
TTCGACGCGGCGCACGAGACCTGGCGTGACGGCTTTGGCGCTGCAGCGGA
AGCGGAGGGGGAGGGCTGCGGCAGGGGCGATGTGCGGCATCTGGAGGCAC
GGCTCAGTAACGGGCGGCTGCTGCTGGGGCTGAGGAGGTGCATCGCCGCC
GCCATGAGAGCGGGCAAGGGTGGCAAAAGTGCTCAACCGTTCCAGGGCGC
GCTGGACGGCAGCAGCGACGTGCTGCCCGCTCTCGACAAGCTCTTCGGCC
AGGACGCGGCGGCGGCGGCGGCACAGCTTGCGGCGGCGGAGGCGGCGGCG
CTCGCAGCGCTGGAGCCTGCTGACGCGCTGCGCCTGGACCCGAGCCCCGC
GGCGACGGCGGCGGAGTGGTCAGCGCGGCTCAGCGCCGCAGAGGACGCCG
CGCAGGCCATCGCGGCGCGGCGCCGCGCGTGGCACTACGCAGCGCTTGAG
CACGCCGCAGCGCTGCACGTGGAGGACGGCGCAGCCGACGCTGCCGCCGC
CGCTGCCAGCCTCGCCACCGCGACACCGGAAGCCACGGCGTCGGGCGCCG
CCGCCGCCGCCGTCAGCGACGCGCAAGCGGCGGCGGAGGAGGACGGCGGA
GAGCTGTTTGCGCTGACGGCGGCGGAGCGCGCAGCGATGCCGCCGGCGGT
GCTCGCGCGCCTGCGCGCGCAGCACGCGCTGGTGCTGGCGGCGTTCCGCA
GCCCCGCGGACGCAGCGGCGGCGGCCGCGGCGCTGCTGCCGCTTCCCAGC
GCCGCCACCGCGGCGTCGCCGCATGTCGACAGCCTCGATGCCACAGGGGC
GGCGGCAGCGGCGGCGGTGGGCGCTGTGGTGAAGGCTGAACACGAGCAGC
CGTTCTCAACAGGTGCCTCGGCGGCGCCCAACATGGAGCGTCGCCGCGCG
TCATTACGCGCGGCCGCAGCGGAAGCAGCAGCGGTGGGCCCGCTGGCGGG
CGGCAGTGGCGGTGTGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGCTGG
GGCGCGGGCGCCTGCGCGCGGCGGCTTTGTTTGCGGACGCGGCGCACGCG
GTGGAGGCCCACGCCGCGTGCGCCGCCGCCGCCAGCTTTGCGCTGCTGGT
GCAGCTGCAGGCCGTCAAGCGCGCCGCGCCGGTGGAGCAGGCTGCGCTCC
GATGCGGTGCCGGGCGCGCGTTGGACGGCGCAGGCGTGCGCGCCGGCGCG
GCGCGCCCGCCGATGGGCCCGGGACTGCTGCCGTCGCGCGTGGTGAACGC
GCACCGCATCGCGCGCACGCTCCCGCCGCCGCCGCCGCGCACGCCGCCGC
CGGAGGCAGCGATCCGCGGCGGCGACGCCGCGCTGCCCATGCCGCGCTGG
GTGCCCGATGCCGCCGCCGAGGGGGGCTTCAGGGCTGAAATCGAGAGACC
AGATGGGCTGCCAGATGACGAAGCGACTGAGGCGGCAGTGGTGCAGGAGC
AGGAGCAGCAGCAGCAGCAGCAGCATGAACGGCGCGCCAGTCTGGAGCTA
GAGCAGCAGCGCGTGCTGCAGCAGCAGCAACAGCAGCATGAGCTTCAGCA
GCAGCAGCTGCTGCACAAGCAGCGGCAGCTTCAGCAGCAGCAGCAGCAGC
GGAAGCTGGCACAGCAGGCTCAGCTGCAGGCACAACAGCAGGCACAGCAG
CACGTAGAACAGCAGGCGCAACAGCAGCAGCAGCAGCAGCAGCAGAGGAA
GCAGCAGCTGGCTGCAATGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAAA
TGCGTCAGCAGCAGCAGCAGCAGCAGCAGCTGCTGCGCACAGCTGCACAA
CAGCAACAGCAGCAGCAGCAGCAGCAGTCACACGGCGGCGCTGTCCACAC
TCCGCGCCACCGCTACGAGGCGCAGTCCCACATGCTGCAGCAGCAGCAGC
AGCTCAAGCACCTGCAGCAGCAGCAGGCGGCAGCGGCGCAGATCCAGATG
CTGCAGCAGCAGCTGGCGCTGCAGCAGGCGCAGGCACAGCTTCGGCAGCA
GCAGCAGGTGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGGCACGGCGG
CAACGGTGGCGGGACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGTC
CAGGCCGCGCAGCTGGCGGCGCTGCGGCAGTCGCAGCAGCTGCAGCGGCT
GCAGTTTGCGCGCATGCAGCAGCAGCAGCAGCTGGGGGGCTTCGCGCCGC
CGATGGGCAGCCCGCCCGGTCAAGCGAGCTTGCAGCAGCAGCAGCAGCAG
CAGCAAGGCGTAGACGCGGGAGGGAACCCCCTGCAGCACGCTTCAGCCGC
GCTGGCCTCCGTTGGCAGCGCCAACGTGCTTCCCAACGGCGGCTTGAACG
GCGCCGGCGGAGGCTGGCTGTAG