Trimin1|354296|estExt_Genemark1.C_Ctg_2270004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354296
Unique Name	Trimin1\|354296\|estExt_Genemark1.C_Ctg_2270004
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1041

Homology

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BLAST of jgi.p|Trimin1|354296 vs. uniprot
Match: A0A835Z816_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z816_9STRA)

HSP 1 Score: 1213 bits (3139), Expect = 0.000e+0
Identity = 1040/1040 (100.00%), Postives = 1040/1040 (100.00%), Query Frame = 0

Query:    1 MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL 1040
            MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL
Sbjct:    1 MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNSAARQCDSDARYFSQDTGCYYCSQYFDXXXXXXXXXXXXXXXXXXAPQGDAELPPKQHRXXXXXVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRRPPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALETRRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRXXXXXXXXXXXFDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAAAMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLXXXXXXXXXXXXXXXXXXXXXSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALEHAAALHVEDGAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEEDGGELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAXXXXXXPLPSAATAASPHVDSLDATGAXXXXXVGAVVKAEHEQPFSTGASAAPNMERRRASLRAXXXXXXXXGPLAGXXXXXXXXXXXXXXALGRGRLRAAALFADAAHAVEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGAARPPMGPGLLPSRVVNAHRIARTLPXXXXXXXXXEAAIRGGDAALPMPRWVPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEXXXXXXXXXERRASLELEQQRVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEQQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVHTPRHRYEAQSHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAAQLAALRXXXXXXXXXXXXXXXXXXXGGFAPPMGSPPGQASLQXXXXXXQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL 1040

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354296 vs. uniprot

BLAST of jgi.p|Trimin1|354296 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z816_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 731..855
None	No IPR available	COILS	Coil	Coil	coord: 891..927
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 989..1008
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 853..880
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 669..747
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 709..723
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 975..1017
None	No IPR available	PANTHER	PTHR44240:SF10	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED	coord: 379..821
None	No IPR available	PANTHER	PTHR44240	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED	coord: 379..821

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_227	contig	Contig_227:17417..25284 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354296	mRNA_17557	Tribonema minus UTEX_B_3156	mRNA	Contig_227 17417..25284 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354296|estExt_Genemark1.C_Ctg_2270004 ID=Trimin1|354296|estExt_Genemark1.C_Ctg_2270004|Name=jgi.p|Trimin1|354296|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1041bp
MARSGWTVIAVATKETQAGQPPRSKSNTRQREHQQQASRPVLSSTSASNS
AARQCDSDARYFSQDTGCYYCSQYFDEEEEDQLLQQHEQKRRAAAPQGDA
ELPPKQHRHQHQHVSIAEPHQHKLEAFCDRRRSSSSSGVALEEGVLMDRR
PPLIVELHPCHWKIRTPSADFAATVHPRRAAAGALQYGRGARCVLLALET
RRLPRELLWAAPEAAHCAGGRGGIEVELRDLRGAPPPQRAGSGGDGGGGG
FDAAHETWRDGFGAAAEAEGEGCGRGDVRHLEARLSNGRLLLGLRRCIAA
AMRAGKGGKSAQPFQGALDGSSDVLPALDKLFGQDAAAAAAQLAAAEAAA
LAALEPADALRLDPSPAATAAEWSARLSAAEDAAQAIAARRRAWHYAALE
HAAALHVEDGAADAAAAAASLATATPEATASGAAAAAVSDAQAAAEEDGG
ELFALTAAERAAMPPAVLARLRAQHALVLAAFRSPADAAAAAAALLPLPS
AATAASPHVDSLDATGAAAAAAVGAVVKAEHEQPFSTGASAAPNMERRRA
SLRAAAAEAAAVGPLAGGSGGVAAAAAAAAAALGRGRLRAAALFADAAHA
VEAHAACAAAASFALLVQLQAVKRAAPVEQAALRCGAGRALDGAGVRAGA
ARPPMGPGLLPSRVVNAHRIARTLPPPPPRTPPPEAAIRGGDAALPMPRW
VPDAAAEGGFRAEIERPDGLPDDEATEAAVVQEQEQQQQQQHERRASLEL
EQQRVLQQQQQQHELQQQQLLHKQRQLQQQQQQRKLAQQAQLQAQQQAQQ
HVEQQAQQQQQQQQQRKQQLAAMRQQQQQQQQQMRQQQQQQQQLLRTAAQ
QQQQQQQQQSHGGAVHTPRHRYEAQSHMLQQQQQLKHLQQQQAAAAQIQM
LQQQLALQQAQAQLRQQQQVQQQQQQQQQYGTAATVAGQQQQQQQQQQQV
QAAQLAALRQSQQLQRLQFARMQQQQQLGGFAPPMGSPPGQASLQQQQQQ
QQGVDAGGNPLQHASAALASVGSANVLPNGGLNGAGGGWL*