mRNA_17277 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353912
Unique NamemRNA_17277
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A836CIF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF2_9STRA)

HSP 1 Score: 932 bits (2410), Expect = 0.000e+0
Identity = 688/688 (100.00%), Postives = 688/688 (100.00%), Query Frame = 1 
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 2064
            MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS
Sbjct:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 688
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: D8LLC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC8_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.680e-59
Identity = 243/737 (32.97%), Postives = 313/737 (42.47%), Query Frame = 1 
Query:    7 KKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVP---LPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFS---------GSDGELDDPSEFSTPSESGSYSGDAPTAD-----------AAAA-------------ALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDG---------------SXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 2064
            KKKFI+  + TT+ +VHRSQ DKA  EG+E +ASEFVL+P+G  +  R    R     A  G G GG      R+HINA                        LP+DG  YDY+ HLK+MGGGTF++K G+V         G    G +  +P E+LP+ E  + R L A+TIS+KVMD DM                                          E++D+         +DDFV+QAAG G  +DGGFDFDAH+ARL+ AS +E GLR R  DDD            SD E DD  +     + G+ S D+   D           AAAA             A+L +QFEATLA YDSD WGE                             +    A+  MD+FL    D  W  G+ R   D   +     A +G                  S        XXXXXXXXXXXX       A A    SGPRLG LRG  +                              X         EE++E +  ++   +Y ++ P E+WDCET++STYSNLDNHP+VL                   V   +      + LS KTGLP+GVL +       + D G  S             N+GE R   ETAEEK+ RKA+IK  +R KR +K  +K  F    K  +  L N E    RSVF+YS
Sbjct:    4 KKKFIDKKESTTFHVVHRSQQDKAN-EGEE-EASEFVLIPSGPPRDSRPQDERKA---AGKGKGKGGVA-GAERDHINALG----------------------LPNDG--YDYDQHLKSMGGGTFVSKTGKVQHFAEGNSQGARGGGAKPAIPEEALPSGET-LDRQLEAVTISEKVMDGDMRRALAAGLADVGE-----------------------------EDWDD----ESNMLDDDFVVQAAGAG--EDGGFDFDAHVARLMEASAKETGLRQRSRDDDLQTKGLVRLRRDSDSESDDSEDDVATLDGGAGSDDSGEIDDALLEGLDISGAAAAGGGVPGEGTEEDRAVLDSQFEATLAAYDSDEWGE---------------LEEDDDRVQGRWDLEQHDYANTCMDDFLAANEDARWTEGVQRLPPDQRSIAAATLAIEGXXXXXXXXXXXXXXXXXXSVGDAGRAGXXXXXXXXXXXXGVGPSVEAAAKTATSGPRLGKLRGFGA---------------------------VPVXXXXXXXXXGEEDDELH-DMEHHNEYLREKPAEQWDCETIVSTYSNLDNHPSVLGTGRKAKPGRARRSPVAEGVGGGDASTVQQVALSAKTGLPLGVLPERT-----YNDTGMVSL--------IAGKNKGEKRDTEETAEEKRRRKAQIKLNKRDKRVQKKNVKTAFTSEAKVISHALANPEAPQNRSVFSYS 618
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S0XBI8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.920e-16
Identity = 88/290 (30.34%), Postives = 119/290 (41.03%), Query Frame = 1 
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGA------DDDF 852
            MGKK FI+  +G TY +VHRSQ D A A  +E   S++VL+PA ++       +     +    +     ++T   +HIN                         L     GYDY  H+K + GG FI   G +   P+  +        +P + LP+ E E  RNL AI ISDK MDDD+                                           +FD  E       +DDFV+Q   +    D  FDFDAHIARLIA SE+++G  P  A      DDDF
Sbjct:    1 MGKKPFIKKSEGQTYHVVHRSQTDSAYA--NEEKPSDYVLIPA-QLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHIN------------------------HLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVKEIE------IPEDLLPSAE-EFDRNLEAIVISDKYMDDDIRNAL---------------------------------------DFDGDEDGEFEELDDDFVIQVMAEPEVPD--FDFDAHIARLIANSEKDLGYVPARAHVTDTDDDDF 215
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S0XBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBG0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.530e-15
Identity = 84/280 (30.00%), Postives = 115/280 (41.07%), Query Frame = 1 
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGA 840
            MGKK FI+  +G TY +VHRSQ D A A  +E   S++VL+PA ++       +     +    +     ++T   +HIN                         L     GYDY  H+K + GG FI   G +   P+  +        +P + LP+ E E  RNL AI ISDK MDDD+                                           +FD  E       +DDFV+Q   +    D  FDFDAHIARLIA SE+++G  P  A
Sbjct:    1 MGKKPFIKKSEGQTYHVVHRSQTDSAYA--NEEKPSDYVLIPA-QLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHIN------------------------HLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVKEIE------IPEDLLPSAE-EFDRNLEAIVISDKYMDDDIRNAL---------------------------------------DFDGDEDGEFEELDDDFVIQVMAEPEVPD--FDFDAHIARLIANSEKDLGYVPARA 205
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2KVM0_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVM0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.480e-11
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = 1 
Query: 1558 YFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANR---RSVFAYS 2064
            YF +     WDCE++LSTYSNLDN+P V+  +                 +      P  I LS KTGLP+GV ++  + ++   D  G    D+        VNRGEAR + E+  +KK RK  +KEER++ R +K  +K  F++    E +  G AE  +     SVF Y+
Sbjct:  228 YFSQTSRNPWDCESILSTYSNLDNNPVVIGRSKKRKGKKKIGKDLADEESRIPEEEPVQIKLSNKTGLPLGVFDNYNQSQSPEEDHYGYGETDT-----FLSVNRGEARDKQESNMDKKVRKLTVKEERKICRMQKKMMKEAFKD----EFQKRGTAEVVDAVGGASVFRYT 390
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2R514_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R514_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.290e-10
Identity = 64/182 (35.16%), Postives = 84/182 (46.15%), Query Frame = 1 
Query: 1534 VPIDETF----DYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREG-GKAEARVLGNAETANRRSVFAYS 2064
            +P +E F     YF +     WDCE++LSTYSN DN+P V+                   V       PA I LS KTGLP+  +  A                    DD    VNRG+AR RGE+ EEKKARK  +K+E+ + + +K  +K  F E   +    VLGN      +SVF YS
Sbjct:  411 LPPEEVFIDGKSYFTQRTVNPWDCESILSTYSNCDNNPAVIGR----NRKKKSSKPKETGVEGIPEDQPAQIRLSNKTGLPINTMPTAYTD-----------------DDTLASVNRGQARRRGESKEEKKARKQGVKQEKLIAKFQKKIMKEAFAEEFDRRSTSVLGN--DVGGKSVFRYS 569
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2KP15_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KP15_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.460e-10
Identity = 65/190 (34.21%), Postives = 91/190 (47.89%), Query Frame = 1 
Query: 1498 LAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFR-EGGKAEARVLGNAETANRRSVFAYS 2064
            LA L+  EE+  +   +   YF+++    WDCE++LSTYSNLDN+P V+  +                 +      P  I+LS KTGLP+GVL   ++    H   G             P+    E R RGET EE+KARK R+K+ ++  R +K  +K VF  E  K  A  L  A+      VF YS
Sbjct:  345 LAELEPPEEDVLI---DGKSYFEQSTINPWDCESILSTYSNLDNNPAVIGHSRRRRLKKKKNALDVDSTSGE----PKKILLSSKTGLPIGVLPTTQKAEKTHESRG-------------PKA---EQRKRGETPEERKARKERVKKNKQEARLQKRVMKGVFADEFAKRSASTL--ADDVGGVPVFRYS 509
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A2X0MR88_9BASI (BQ5605_C041g11959 protein n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MR88_9BASI)

HSP 1 Score: 75.9 bits (185), Expect = 1.860e-10
Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 1 
Query: 1498 LAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSD----GDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNA 2028
            LAA++ + +EA            + P+ERWDCETVLSTYSN+ NHP +L                   V        + I L  KTG P+  +  A   RA  R G G + GD++    GDD APRV     R R ETAE+K+ARK+ +KE+R  +R EK + K  F +    + RV G A
Sbjct:  441 LAAVERQRKEARARKGNESIDIDERPKERWDCETVLSTYSNISNHPRLLR------------------VKGGPTSRASRIRLDEKTGFPI--VGSA--VRAGLRAGSGETIGDAEDEDEGDDEAPRVET-IKRPRDETAEDKRARKSAVKEQRSARRXEKKSTKDEFSQEMTRQKRVAGRA 598
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: C3ZI23_BRAFL (Protein LTV1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZI23_BRAFL)

HSP 1 Score: 73.6 bits (179), Expect = 2.010e-10
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 1 
Query: 1573 PEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDA--RRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGN 2025
            P+E+WDCE++LSTYS L NHPTV+                       +P     I+LS+K+G+P+GVL      +++ E  D        S+ ++ + R+    AR +GETAEEKK RK  +K ERR +R EK A K  F+E    + +V+ N
Sbjct:  157 PKEKWDCESILSTYSTLYNHPTVIKDPP-------------------KPKKGKQIILSQKSGIPIGVLGGKGLTKKQLEDLDSMDEELESSEDEEESERIPA-PARRKGETAEEKKLRKQAVKAERRERRMEKKANKLAFKEEVSRQEKVVMN 289
[Close]
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A6P5AFU4_BRABE (Protein LTV1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AFU4_BRABE)

HSP 1 Score: 73.9 bits (180), Expect = 5.020e-10
Identity = 54/162 (33.33%), Postives = 83/162 (51.23%), Query Frame = 1 
Query: 1543 DETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAP-RVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGN 2025
            DE      + P+E+WDCE++LSTYS++ NHPTV+                       +P     I+LS+K+G+P+GVL      + +  +      G+S  ++     +    AR +GETAEEKK RK  +K ERR +R EK A K  F+E    + +++ N
Sbjct:  309 DELVKMVTEQPKEKWDCESILSTYSSIYNHPTVIKDPP-------------------KPKKGKQIILSQKSGIPIGVLGSKGLTKKQLEEQDRLEEGESSEEEEMEITIRSAPARKKGETAEEKKLRKQAVKAERRERRIEKKANKLAFKEEASRQEKIVMN 451
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIF2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLC8_ECTSI2.680e-5932.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0XBI8_9STRA7.920e-1630.34Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S0XBG0_9STRA1.530e-1530.00Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2KVM0_9STRA1.480e-1134.30Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S2R514_9STRA1.290e-1035.16Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2KP15_9STRA1.460e-1034.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2X0MR88_9BASI1.860e-1037.57BQ5605_C041g11959 protein n=3 Tax=Microbotryum Tax... [more]
C3ZI23_BRAFL2.010e-1036.60Protein LTV1 homolog n=1 Tax=Branchiostoma florida... [more]
A0A6P5AFU4_BRABE5.020e-1033.33Protein LTV1 homolog n=1 Tax=Branchiostoma belcher... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_195contigContig_195:200957..209291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353912|estExt_Genemark1.C_Ctg_1950019
BRITEko00000,ko01000,ko03009
KEGG koko:K14798,ko:K14811
EC3.6.4.13
GOsGO:0000054,GO:0000056,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007049,GO:0008104,GO:0008150,GO:0008152,GO:0008361,GO:0009058,GO:0009059,GO:0009987,GO:0010008,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0022402,GO:0022613,GO:0022626,GO:0022627,GO:0030684,GO:0030688,GO:0031090,GO:0031410,GO:0031503,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032535,GO:0032991,GO:0033036,GO:0033750,GO:0034448,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034660,GO:0042023,GO:0042254,GO:0042274,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044786,GO:0045184,GO:0045793,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090066,GO:0090304,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1901360,GO:1901576,GO:1990904
Preferred nameLTV1
Descriptionribosomal small subunit export from nucleus
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2637@1|root,KOG2637@2759|Eukaryota
Evalue2.74e-61
Seed ortholog2880.D8LLC8
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLow temperature viability protein
Ec32 orthologEc-27_002150.1
TranscriptId354234
TrackFilteredModels1
ProteinId353912
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353912gene_17277Tribonema minus UTEX_B_3156 geneContig_195 200957..209291 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353912Trimin1|353912|estExt_Genemark1.C_Ctg_1950019Tribonema minus UTEX_B_3156 polypeptideContig_195 201375..209291 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17277_10exon_17277_10Tribonema minus UTEX_B_3156 exonContig_195 200957..201647 -
exon_17277_9exon_17277_9Tribonema minus UTEX_B_3156 exonContig_195 202745..202900 -
exon_17277_8exon_17277_8Tribonema minus UTEX_B_3156 exonContig_195 203893..204694 -
exon_17277_7exon_17277_7Tribonema minus UTEX_B_3156 exonContig_195 205624..205769 -
exon_17277_6exon_17277_6Tribonema minus UTEX_B_3156 exonContig_195 205875..205898 -
exon_17277_5exon_17277_5Tribonema minus UTEX_B_3156 exonContig_195 206385..206486 -
exon_17277_4exon_17277_4Tribonema minus UTEX_B_3156 exonContig_195 206649..206822 -
exon_17277_3exon_17277_3Tribonema minus UTEX_B_3156 exonContig_195 207378..207521 -
exon_17277_2exon_17277_2Tribonema minus UTEX_B_3156 exonContig_195 207652..207717 -
exon_17277_1exon_17277_1Tribonema minus UTEX_B_3156 exonContig_195 209112..209291 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17277UTR3_17277Tribonema minus UTEX_B_3156 three_prime_UTRContig_195 200957..201374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17277CDS_17277Tribonema minus UTEX_B_3156 CDSContig_195 209112..209291 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17277 ID=mRNA_17277|Name=jgi.p|Trimin1|353912|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2485bp|location=Sequence derived from alignment at Contig_195:200957..209291- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCAAGAAGAAGTTCATCGAGTCTGGCAAGGGCACCACCTATCGGCT
GGTGCACAGGTCGCAGCTGGACAAAGCAGCCGCGGAAGGCGATGAGGGCG
ATGCCAGTGAGTTCGTCCTGGTGCCAGCGGGGGAAATAAAGCAGAGGCGC
ATCGCCACCAGACGAAATGGCGGCACTAACGCGCAGCACGGCTCCGGCGG
CGGCGGCGCGCGCTACACGGTCGCGCGCGAACACATCAACGCCTTCGCGC
AGCACGGCTCCGGCGACGGCGGCGCGCGCTACGCGGGCGTGCGCGACCAC
ATCAACGCCTTCGGCCTGCCGGACGATGGCACTGGCTACGACTACGAGAG
CCACCTCAAGACGATGGGCGGCGGCACGTTCATAAACAAGGAGGGGCGCG
TGGGCTCCGTCCCCCTGCCTGGAGACGCGCGCGAGGGCCGCCGAGCCGTG
CTGCCTGCAGAGTCGCTGCCGGCAGAGGAGGGCGAGGTGGCGCGCAATTT
GGCAGCGATAACGATTTCGGACAAAGTCATGGACGATGACATGCGGGCAA
TTATCACCGGCGAGTCGCTGCCGGCGGAGGAGGGCGAGGTGGCGCGCAAC
CTGGCGGCAATAACGATCTCGGACAAAGTGATGGACGATGACATGCGGGC
GACCATCACCGGCGAGGTGGAAGAGTTCGACGAGCTGGAGGTGGAGGAGT
TCGACGAATTGGAGGATGATTTTGTGCTGCAGGCCGCAGGCGACGGCGGC
GACGACGACGGCGGTTTCGACTTTGACGCGCACATTGCACGCCTCATCGC
GGCGAGCGAGCGCGAAGTGGGGCTGCGGCCGCGCGGCGCGGACGACGACT
TCTCCGGCTCTGACGGCGAGCTCGACGACCCCTCGGAGTTCAGCACGCCG
AGCGAGAGCGGCAGTTACAGCGGTGACGCTCCCACTGCTGATGCCGCCGC
AGCCGCGCTCCTCGCGGCGCAGTTCGAGGCGACGCTCGCCGAGTACGACA
GCGACACGTGGGGGGAGGGGGGCGGGGATGGGGACGCCGCGGAGGGGGAA
GAGGAGGGGGAAGACGAGGGGGAGGGGGACGAGGGGGAAGGAGAGGGGGG
GGCGCAGATCGGCGCTCTAGCGGACGCCTACATGGACGAGTTCCTGAGGG
AGCAGGCGGATTTGAACTGGTTCGCGGGGCTCGGCCGCCGCACCGCGGAC
GTGCCGCGCGTGTGGCAGGGGGAGCGCGCGACGCAGGGCGAGGACGGCAG
CGGCGGCAGCAGCAGCAGCGCTCAACAACATCGACAGGAGGGCGAGCACG
GCGCCAGCGCGGGCGCGGAGGCGGAGGCGGCGGCGCAGGCGCCGTGCGGG
CTCAGCGGTCCCCGCTTGGGGTCGCTGCGGGGGCTGAACAGCAGGGGGGG
CACTGGCGGGGGGGGCGCTGAGGGGGCAGAGGGGGGGAGTGAGGGGGCAG
GGGGGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGCCGCGGCGGCGGCTG
GCGGCGCTGGATGAGGAGGAGGAGGAGGCGTACGTGCCTATTGATGAGAC
GTTTGACTACTTTAAGAAGGCGCCGGAGGAGCGGTGGGACTGCGAGACCG
TGCTGTCGACGTACTCCAACCTGGACAACCACCCGACGGTATTGAGCGCT
GCTGCCGCGAAGGGCGCGCGGCGGCGCGCGGGTGGCGGCAGCGCCTCGTC
CGTGGCGGCCTCCGAGCCGCTGCACCCCGCCCCCATCGTCCTGTCGCGCA
AGACGGGGCTGCCCGTGGGCGTGCTCAACGACGCGCGGCGACAACGCGCG
GAACACCGCGACGGCGGCGGCAGCAGCAGCGGCGACAGCGACGGCGACGA
CGGCGCGCCGCGCGTCAATCGGGGTGAGGCGCGCGCGCGCGGCGAGACTG
CCGAGGAGAAGAAGGCGCGCAAGGCGCGCATTAAAGAGGAGCGTCGCCTG
AAGCGCGGCGAGAAGGCCGCTATTAAGGCCGTGTTCAGGGAGGGCGGCAA
GGCGGAGGCGCGCGTCCTGGGCAACGCCGAGACGGCCAACCGCCGCAGCG
TCTTTGCCTACAGCTAGCGTGCGGCGCGACCGCATGTTATGCGTCGTGGC
ACTTTGAAGTAGTACGGCCGACCGCCGCAGCATGTTCGCCTACAGCTAGC
GCGTGTCGCGCGCGCGTGCGTGATTTGTCGTGGTAGTACTCGTTTGGCTA
CTGTGTGGTGGCGCAGCGTGCTCAGGCTCTCCTTATGCGCCGCTGTGCAT
AAAATACTTAGTGCGCTGCTGTAGACGGCTGCTGCGCCCGGTCTGCAGTG
GCGGCGGCGACAGCAACAGCAGCAGCAGCACCTGCTGCAGTTGGTTTGCC
GCGTTCACCAGATGGCACGCACGGCGCTGTTGCGGGTGCCCTGTGGGGTA
TCGTATGGCTGTTGCGGCTGCCCTACAAGCGGCGGCGGCTGCGCGCACGT
GGTGTCAATTTTGCTGCTGAGCTCGGACATGCTGG
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protein sequence of jgi.p|Trimin1|353912

>Trimin1|353912|estExt_Genemark1.C_Ctg_1950019 ID=Trimin1|353912|estExt_Genemark1.C_Ctg_1950019|Name=jgi.p|Trimin1|353912|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=689bp
MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRR
IATRRNGGTNAQHGSGGGGARYTVAREHINAFAQHGSGDGGARYAGVRDH
INAFGLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAV
LPAESLPAEEGEVARNLAAITISDKVMDDDMRAIITGESLPAEEGEVARN
LAAITISDKVMDDDMRATITGEVEEFDELEVEEFDELEDDFVLQAAGDGG
DDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTP
SESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGGDGDAAEGE
EEGEDEGEGDEGEGEGGAQIGALADAYMDEFLREQADLNWFAGLGRRTAD
VPRVWQGERATQGEDGSGGSSSSAQQHRQEGEHGASAGAEAEAAAQAPCG
LSGPRLGSLRGLNSRGGTGGGGAEGAEGGSEGAGGAGAAAAAAAAPRRRL
AALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSA
AAAKGARRRAGGGSASSVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRA
EHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRL
KRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS*
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mRNA from alignment at Contig_195:200957..209291-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17277 ID=mRNA_17277|Name=jgi.p|Trimin1|353912|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8335bp|location=Sequence derived from alignment at Contig_195:200957..209291- (Tribonema minus UTEX_B_3156 )
ATGGGCAAGAAGAAGTTCATCGAGTCTGGCAAGGGCACCACCTATCGGCT
GGTGCACAGGTCGCAGCTGGACAAAGCAGCCGCGGAAGGCGATGAGGGCG
ATGCCAGTGAGTTCGTCCTGGTGCCAGCGGGGGAAATAAAGCAGAGGCGC
ATCGCCACCAGACGAAATGGCGGCACTAACGTGAGTTCCCTTGAGGCGAC
TGATCGTCGGACTATTACGTCTGTCTTGGACAATTTCATGGTTGTCGTAT
TCAGGAGCTCAGCGGCCCTTGTTCATCGGTTTTACAGTTTATACCATTGC
CAGCGCTGATCTCTGCAGGCGAGCCTATCGTGCTGTGAGCCCACAGTAGT
CCCAGACGCAAGAACTGAGCGCAGCTGTGTTCGTCCGCTTACGAAGGAAG
TCGTTCAGTCAAGCAGCAGGTGCTTTACAAGCAAGCTTGTTTTTTGGAAG
GTGGGCAATGTGTCAGATGTGAAATCACTGGAGGCGATGGTTGATCTGCT
GAGTGGGCAGATGTACGAGTGCAGGTCACGAAAACAAAGAATTTACATTG
ATCAGGGACTATGGATGTTTATGAATTCGAAACAGGAATAGAGATGATGC
AAAACATTATGCAAGACCAGTGGCATTTGTGTTCCCATTGCCGTTCACTC
TGCCTATTCCTGCAAACATTCTATACACCGATCTGTCTTGGACTGCAATT
AGTGAAGCGGCACCTCTGTGCGCAATTTGGAGGCTATGATGTCTGAGGAC
CGCAATTCGCTGCAACAGGTCTATTAAATGCGTGCTCAATATCCGCAGTC
CTTAGATGATAGTAATTTTAGTCCTAGCCAATGGCCACAACATCATGCAC
TTTGCGCAGCACTCGGCTTGGATTGGCATGAGCTCAGCCCGTCCTGCCGC
TTGACACTGACTTGAGGAGTGGTTTAATTGAGCCGCTAGACTGTTTTTGT
GCAAGCATAGACAAGATGTGTTCTCTCTGCTTCACGCCGCAACGTGCCTT
CGTCCGCAGTTTGTGTATTGTCAATTTGCAAAACAAAAATGTGTCAGGTT
GTGGGTCGGGGTACCGGTACATGCCACGCGACAGCCAAACCCGTCCGCGG
ATGATGCCTTCTGCAGCAGCAAAGCCCATGTGTTTGTGGAAGCTTTGCTC
AGTCGTGTGTCAGCCGGTCTCACCACTGGTGTGCGCAGAAGCGTTGTCAA
AGCTTGCACCAACCGTGCTCGTCACGACCGGCAGTGACGCAAGCTGCATA
CCTGTTGCAGCTGCTGTTTAGCATCGTGGTGGTTGTGTAACGTGAGAGCC
ACGTCTGCACGCACTCAACACCTTCGTTGCGCCGCCTGCAGCGTGGTCGC
CTGCACACCCCAGCGCATTGCGGCGCCGGCGCTATAAAATTCAGTGCACT
GCTGTGCCGCGTGCGCGCAGCACCGCCGATGACGCCTCCGCATGCTGACG
GGCCTCGCGGCGCATGCGAATTTTCAGCCGACCCCTGCTATCACTCATTG
CGCCGCTCATTTATGCACCCAATCCGCTCACACTTTCCGAACGTCGGTCG
ATTGCTGTCGCGCGGCATCGCCAGGCGCAGCACGGCTCCGGCGGCGGCGG
CGCGCGCTACACGGTCGCGCGCGAACACATCAACGCCTTCGTCCTGCCGG
ACGACGGCACCGGCTACGCGCGTTTTCAGCCGCTTCCCGCCATCACTCAG
TGCGCCGCTCGCTCGTTTATGCACGCACTCCGCTCACACTTTCCCCACGT
TGGTTGATCGCTGCCGCCAGGCGCAGCACGGCTCCGGCGACGGCGGCGCG
CGCTACGCGGGCGTGCGCGACCACATCAACGCCTTCGGCCTGCCGGACGA
TGGCACTGGCTACGACTACGAGAGCCACCTCAAGACGATGGGCGGCGGCA
CGTTCATAAACAAGGTGGGTGCGCGGGCGGGGCGCAGCTGCAGCCAGGCT
TGTGAACATGGTGCCAGTATGGATGTGGCAGTTGCGGCTCATTGCATGTC
CACGATCGGGGGCGCAGACCACAGTACACACGTTTTTTCATACTGTAGCA
GCACGCACGGCTGACGTCGGTCTGCTGTCGCATTTGTTACCGTCATGTCT
ACCTCTGGCGGTAGGCTCATGAGCAGCAGCTCTCTACGTTGCCTCACATG
GACAACGTCAATGCTTTGGCGACTGGGTTAGGGTTAGGGTTAGGGTAACC
CTAACCCTAAGGTATCACACTGCTGAGCACCGTGCGCGTCCGTGGGCAGG
GGGGGCCGGCCACGGCCTCTGAGCCTCATTGCAGCGGGTGCCGCCGCCGC
AGGCGCTCGCGTGCACGTCGCGTGCGCTTGCATGCGCCACTGAGCGAGCG
CGACGACGGCCACAGCTCTCGCGCGATGCAATCCCTCTCATCGCTGCCAT
GTTCAACTTGTCCCCCCCTGCTGACTTCAACATGCACACACCCTGCTGAC
CGCTTGCGCCTTTGCTCAGGAGGGGCGCGTGGGCTCCGTCCCCCTGCCTG
GAGACGCGCGCGAGGGCCGCCGAGCCGTGCTGCCTGCAGAGTCGCTGCCG
GCAGAGGAGGGCGAGGTGGCGCGCAATTTGGCAGCGATAACGATTTCGGA
CAAAGTCATGGACGATGACATGCGGGCAATTATCACCGGCGAGGTGAGAT
GATGTCAAGTTGGAGCAATTGAAAATGTCATGTACTAAAATACTTAAGTT
GATGTGAGCGCGCGGCACTGTAGTATTTCAAGGTGAAGTAGCGGATCAAG
TGTGAAATAACTTTCAGTTGAAGTAGCAGTCAGGTGAGTGGTGCCGCCCG
CAGAGTCGCTGCCGGCGGAGGAGGGCGAGGTGGCGCGCAACCTGGCGGCA
ATAACGATCTCGGACAAAGTGATGGACGATGACATGCGGGCGACCATCAC
CGGCGAGGTGAGCGCGCGTCACGGTAGTACTTCCAGCTGAAGTAAACAGC
AAAAGTGATGTGGCTGCGAGCGTGCGCGGAAGGGGGGGGCGGTGGAAGGG
GGCACGGGCGTTGGTGCCTGCGGAGGCGCTGTGTGCGGAGGAGGGAGACA
GGGAGCTGAACGCTGCGGCAATTACAATGACGAACTCAGTAATCGACAAT
GTCGCGGCAATCATGACCGCCATCGAAGCGATGACCGCAACGTGCGGACC
GTCATCTCCGGCGAGGCCAGCGCTCGGCGGCAGTGAGCGCGCAGCATCAA
AGCTTCATGGTGAAGTTGCAGCTTGCGCACGTCCTTGTGCCTAACGATCA
TCAACGCCCGTCGTTCTGCCGTTGCAGGTGGAAGAGTTTAACGAGCTGAG
GACGACTTTGTGCAGCAAAACATCAACTTGAAGTTGCAGACGCGCGCGTC
CATGCGCCAACGGTCACCAATGCCCGCCGTGCTGCCGTCGCAGGTGGAAG
AGTTCGACGAGCTGGAGGTCGGCTTTGTGCTGCAAGCAGCAGCAAAACTG
CAAGTTGAAGTTGCAGACAATGCCCACGTCCGTGCGCCAACAGGCTTCAA
CGCCCGTCGCTTTGCTGCGCAGGTGGAGGAGTTCGACGAATTGGAGGATG
ATTTTGTGCTGCAGGCCGCAGGCGACGGCGGCGACGACGACGGCGGTTTC
GACTTTGACGCGCACATTGCACGCCTCATCGCGGCGAGCGAGCGCGAAGT
GGGGCTGCGGCCGCGCGGGTGAGAGTAGTAGTCGCTACACATATACTTCA
AGTCTGATAATGAAGTTGAAGAATGGTACAGTGTGGTGTTCTGGCATCCC
AGAAGGGGGAGGCTACGCTGTCAAGTGTGCACAAGCTCATTAGGTCAGTG
GCACAGCACTGTAAAGCCAGGTCACCATTGCTGGTTCCGACTTGTACGGG
GAATGCTGTACTTCGAACTTCTTTGAAGTATGTCGTTACATGGTATGGTA
TGGTATTTCGGCACACCATGAGAGGAGGCTGCGCTGCCAAGTGTGCACAA
GCTATTCAGGTCAGTGATAAAGCCAGGGTCACCACAGTTGGTGCAGGTAC
GGGGCGACTGCTTCCGAAGGCCCACACTATTCCTGTTTGTGGTCATTTAA
ACGTTTTCGGCAGTTTTTGATGTGCACACCATAGCAGTTGTAGCTTTGAC
ACTCACATCGTATGGCTGATTTCTGCGAGCGAGCGCGAAGCGCGGCTGCT
GCGGCTGATGGGCAGGCGTTGAGCGCTGACGTGCAAAACCAGAAGACTCA
TGGGTCATGAGTCGTGATGCATAACGACATTATGTGTGTGGTCAGGGGTT
GTCACGAATTCACAGTATCTGAATAACTCCGACGCCGCTCTACGGAGCCG
TGACTTGTGCGCTTGCGACCCTGACTTTGCTTTACTCCGCGGAGCTTGCG
CCAATCATTGTACAACTCCGACAGATGAACTCTGGCTTCCGCTGCCGGAC
TGCGGCGGGCGGCTGCGGCCGCCTTGCTTGATCGCTGACCATTGATGCAA
CTTCACTGTTGAAGTCTTACCCTAGACTTCGATGCGCGCGCTCTGCAGTG
CGGACGACGACTTTTCCGGCTCCGACGGCCCTGTGCGCTGACTCAAAACT
TCACTGTTGAAGTCCTTACCCTAACCCTCGATGCGCGCGCCCTGCAGCGC
GGACGACGACTTCTCCGGCTCTGACGGCGAGCTCGACGACCCCTCGGAGT
TCAGCACGCCGAGCGAGAGCGGCAGTTACAGCGGTGACGCTCCCACTGCT
GATGCCGCCGCAGCCGCGCTCCTCGCGGCGCAGTTCGAGGCGACGCTCGC
CGAGTACGACAGCGACACGTGGGGGGAGGGGGGCGGGGATGGGGACGCCG
CGGAGGGGGAAGAGGAGGGGGAAGACGAGGGGGAGGGGGACGAGGGGGAA
GGAGAGGGGGGGGCGCAGATCGGCGCTCTAGCGGACGCCTACATGGACGA
GTTCCTGAGGGAGCAGGCGGATTTGAACTGGTTCGCGGGGCTCGGCCGCC
GCACCGCGGACGTGCCGCGCGTGTGGCAGGGGGAGCGCGCGACGCAGGGC
GAGGACGGCAGCGGCGGCAGCAGCAGCAGCGCTCAACAACATCGACAGGA
GGGCGAGCACGGCGCCAGCGCGGGCGCGGAGGCGGAGGCGGCGGCGCAGG
CGCCGTGCGGGCTCAGCGGTCCCCGCTTGGGGTCGCTGCGGGGGCTGAAC
AGCAGGGGGGGCACTGGCGGGGGGGGCGCTGAGGGGGCAGAGGGGGGGAG
TGAGGGGGCAGGGGGGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGCCGC
GGCGGCGGCTGGCGGCGCTGGATGAGGAGGAGGAGGAGGCGTACGTGCCT
ATTGATGAGACGTTTGACTACTTTAAGAAGGCGCCGGAGGAGCGGTGGGA
CTGCGAGACCGTGCTGTCGACGTACTCCAACCTGGACAACCACCCGACGG
TGAGGGGGCGCGCTCGCTTGGTTACTGCGCGTTTGCACTTGTCGAACGTG
CAATGTTTGACGTACTTCAACTGGAAAACCACCAACGGTGAGAGTGCGTG
CTCGCCCGGAAACGGCCGTGGGACGCAGGAGGCACTGATTTGGAACTTCG
GGGAGGTTGTTCGTTGCACATGGTGGACTAGGTGTCACCTTCGAGATGAC
GACAACCGCGTTGTGCTGACAGGGTGCAGCCGCTGTGCTGTTCAGGAGGC
AAAGATTGTTGCGCGTGTGCTCATGTTCAACTCGGAACTGCTTCAATGTT
CAACTACTTCAGCATGCCGGTAGAATGGCGATGGTTTGATGAGACCATGC
TACCGGCATGCTCAACTGTGAGTGCCTGGTTTTGACTAGAAATTTCGTGC
AAGTACTGCGCGCAATTGGCATCATCGTTGGCATCAGTTTTTTCATAATC
TTCTGTGCTGCAGGTTGCCTCAAGTACACGTTTGCACTGTGCACGCTTGC
GGCAGTGTTCATCTACAGCAGGTCCCTGCGGGTTGCTGAGACGCGCAGCA
TTCAACGCCTGGCTCCCGTAAGCAGTGGCGATGATCTCCAGAACCGCCAG
CAAGTGCCGTGGTGGCCATCTGCACCTCGCATGGTTGTCGCCTGCAAATC
TGCAATCACTATGTGCGCTGCTGTCGTGTGGTCGCAACGCTGATTGAACC
TGTGCATCAACGGGCAACTGTCAAACGGACACGCACACACACTCACCCCT
AACCCTAACCCCCCCAACCTGACCCTAGCCCACCCCCCCTCTTCAGATCA
AAATGCGCCGTTGATGTGTACGACACTGTAGTGGTCCGTAAGTGCTCAGT
CTCCGAATGCAGCGACGACGCGCTGCTTGCGCAAGTTTGCTGCTGACCAG
AGACCTGCGCGCGCTGGCGCGGCCGAGACATGGACGACACGAGCCATTGA
CATCACACTTACTCGCCGCCACCACATGAACTGTGCTGCAGGTATTGAGC
GCTGCTGCCGCGAAGGGCGCGCGGCGGCGCGCGGGTGGCGGCAGCGCCTC
GTCCGTGGCGGCCTCCGAGCCGCTGCACCCCGCCCCCATCGTCCTGTCGC
GCAAGACGGGGCTGCCCGTGGGCGTGCTCAACGACGCGCGGCGACAAGTG
AGGCGCCTCTCTACGCTTCTCAGTTCTTTCAAGTAGTATTTGTCATGTAC
ACGTTGGTCGGAGCGCAACAGCCCGCATGATGAGACCATCCCGCAAGACG
GGCCTGCCCGCGAGCGTGCTGAATGGCGTGCCGTAGAAAGCGAGGCTCTC
TTTGACTCGTTGGAACGGCGCTTTCAGGTGCCTGTGCTGTGTTTGGTGCA
GCGGCGCGTGTGATTGCCGCTGCGTGGTACAGTGCATTCCTGGCGCTGCT
TCACGCACTTTCTGTGGCCGGGCGCTGCTGAGCGCTGCTTCATCGGCTTC
AGGGTCAGATTAGGGTTAGGGCCAGGGTCAGGGTTAGACTTCACATAAGA
CGGGACTGCTCATGCGCGTACTCCACGGCGCGCGGAGAAAGGGGACGTCT
CAGCGTGCCTTGCAACAGTACTGGTCCTTGCCTTGCGGCGCCTGCGCGGC
GCGCGTCTATTTCAGCATTGAGCACTGCTGCTCTGTGGCGGTGCAACTGC
CATGTAGTAACTGTTGCTGTGTAGCGGGCGCGGACTGTCTGCATTTGGCG
CTGCTGCTGCGCGGCACAGTTTGAGCACTGCTTCATGTACCCTGTGGATG
AGCCCTGCTGCCCCCTAGGCCCGTTACCGTCCCCTTGTGCATGTCCGTAT
TGGTCTTGTCTGTACAGCAGCTGTAGCACAAGGGCTGGAGTCAAACACCC
GCATTATCCTGTGCATCACAGGCAACAGCGTCGGCGGATGCTATTGAATG
TACTGAGCACTGTGGCACAGCAGCTGACCTGCTGCACCTCAAACTCACCA
TGTACGTTTTCTTTCTGACAGCTGAAGCGCTCGTGACCACCGCGTGCTGG
TCTGTTGCTGTCGATACCATCTCGGTCTACCTCAGAAGCAGCAGAAGAGC
TGGACACTGTTGGCTGCAAAGGGGGTCCGAAGACCAAGCACCGGGCGTTT
GACTGGGGCTTGGCATGCTGGCATGCAGGGAGGAGGCGCGTCATCTTGAA
CTCAAAAATTAAAGTATACCAATCCTGCTGTTGAAGTGCGCAACGCTCCC
GCCCGCGCTCCACTCTGCCCGTGCCCCTGCGTTGCCTCCCTCAGCGCGCG
GAACACCGCGACGGCGGCGGCAGCAGCAGCGGCGACAGCGACGGCGACGA
CGGCGCGCCGCGCGTCAATCGGGGTGAGGCGCGCGCGCGCGGCGAGACTG
CCGAGGAGAAGAAGGCGCGCAAGGCGCGCATTAAAGAGGAGCGTCGCCTG
AAGCGCGGCGAGAAGGCCGCTATTAAGGCCGTGTTCAGGGAGGGCGGCAA
GGCGGAGGCGCGCGTCCTGGGCAACGCCGAGACGGCCAACCGCCGCAGCG
TCTTTGCCTACAGCTAGCGTGCGGCGCGACCGCATGTTATGCGTCGTGGC
ACTTTGAAGTAGTACGGCCGACCGCCGCAGCATGTTCGCCTACAGCTAGC
GCGTGTCGCGCGCGCGTGCGTGATTTGTCGTGGTAGTACTCGTTTGGCTA
CTGTGTGGTGGCGCAGCGTGCTCAGGCTCTCCTTATGCGCCGCTGTGCAT
AAAATACTTAGTGCGCTGCTGTAGACGGCTGCTGCGCCCGGTCTGCAGTG
GCGGCGGCGACAGCAACAGCAGCAGCAGCACCTGCTGCAGTTGGTTTGCC
GCGTTCACCAGATGGCACGCACGGCGCTGTTGCGGGTGCCCTGTGGGGTA
TCGTATGGCTGTTGCGGCTGCCCTACAAGCGGCGGCGGCTGCGCGCACGT
GGTGTCAATTTTGCTGCTGAGCTCGGACATGCTGG
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Coding sequence (CDS) from alignment at Contig_195:200957..209291-

>mRNA_17277 ID=mRNA_17277|Name=jgi.p|Trimin1|353912|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2067bp|location=Sequence derived from alignment at Contig_195:200957..209291- (Tribonema minus UTEX_B_3156 )
ATGGGCAAGAAGAAGTTCATCGAGTCTGGCAAGGGCACCACCTATCGGCT
GGTGCACAGGTCGCAGCTGGACAAAGCAGCCGCGGAAGGCGATGAGGGCG
ATGCCAGTGAGTTCGTCCTGGTGCCAGCGGGGGAAATAAAGCAGAGGCGC
ATCGCCACCAGACGAAATGGCGGCACTAACGCGCAGCACGGCTCCGGCGG
CGGCGGCGCGCGCTACACGGTCGCGCGCGAACACATCAACGCCTTCGCGC
AGCACGGCTCCGGCGACGGCGGCGCGCGCTACGCGGGCGTGCGCGACCAC
ATCAACGCCTTCGGCCTGCCGGACGATGGCACTGGCTACGACTACGAGAG
CCACCTCAAGACGATGGGCGGCGGCACGTTCATAAACAAGGAGGGGCGCG
TGGGCTCCGTCCCCCTGCCTGGAGACGCGCGCGAGGGCCGCCGAGCCGTG
CTGCCTGCAGAGTCGCTGCCGGCAGAGGAGGGCGAGGTGGCGCGCAATTT
GGCAGCGATAACGATTTCGGACAAAGTCATGGACGATGACATGCGGGCAA
TTATCACCGGCGAGTCGCTGCCGGCGGAGGAGGGCGAGGTGGCGCGCAAC
CTGGCGGCAATAACGATCTCGGACAAAGTGATGGACGATGACATGCGGGC
GACCATCACCGGCGAGGTGGAAGAGTTCGACGAGCTGGAGGTGGAGGAGT
TCGACGAATTGGAGGATGATTTTGTGCTGCAGGCCGCAGGCGACGGCGGC
GACGACGACGGCGGTTTCGACTTTGACGCGCACATTGCACGCCTCATCGC
GGCGAGCGAGCGCGAAGTGGGGCTGCGGCCGCGCGGCGCGGACGACGACT
TCTCCGGCTCTGACGGCGAGCTCGACGACCCCTCGGAGTTCAGCACGCCG
AGCGAGAGCGGCAGTTACAGCGGTGACGCTCCCACTGCTGATGCCGCCGC
AGCCGCGCTCCTCGCGGCGCAGTTCGAGGCGACGCTCGCCGAGTACGACA
GCGACACGTGGGGGGAGGGGGGCGGGGATGGGGACGCCGCGGAGGGGGAA
GAGGAGGGGGAAGACGAGGGGGAGGGGGACGAGGGGGAAGGAGAGGGGGG
GGCGCAGATCGGCGCTCTAGCGGACGCCTACATGGACGAGTTCCTGAGGG
AGCAGGCGGATTTGAACTGGTTCGCGGGGCTCGGCCGCCGCACCGCGGAC
GTGCCGCGCGTGTGGCAGGGGGAGCGCGCGACGCAGGGCGAGGACGGCAG
CGGCGGCAGCAGCAGCAGCGCTCAACAACATCGACAGGAGGGCGAGCACG
GCGCCAGCGCGGGCGCGGAGGCGGAGGCGGCGGCGCAGGCGCCGTGCGGG
CTCAGCGGTCCCCGCTTGGGGTCGCTGCGGGGGCTGAACAGCAGGGGGGG
CACTGGCGGGGGGGGCGCTGAGGGGGCAGAGGGGGGGAGTGAGGGGGCAG
GGGGGGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGCCGCGGCGGCGGCTG
GCGGCGCTGGATGAGGAGGAGGAGGAGGCGTACGTGCCTATTGATGAGAC
GTTTGACTACTTTAAGAAGGCGCCGGAGGAGCGGTGGGACTGCGAGACCG
TGCTGTCGACGTACTCCAACCTGGACAACCACCCGACGGTATTGAGCGCT
GCTGCCGCGAAGGGCGCGCGGCGGCGCGCGGGTGGCGGCAGCGCCTCGTC
CGTGGCGGCCTCCGAGCCGCTGCACCCCGCCCCCATCGTCCTGTCGCGCA
AGACGGGGCTGCCCGTGGGCGTGCTCAACGACGCGCGGCGACAACGCGCG
GAACACCGCGACGGCGGCGGCAGCAGCAGCGGCGACAGCGACGGCGACGA
CGGCGCGCCGCGCGTCAATCGGGGTGAGGCGCGCGCGCGCGGCGAGACTG
CCGAGGAGAAGAAGGCGCGCAAGGCGCGCATTAAAGAGGAGCGTCGCCTG
AAGCGCGGCGAGAAGGCCGCTATTAAGGCCGTGTTCAGGGAGGGCGGCAA
GGCGGAGGCGCGCGTCCTGGGCAACGCCGAGACGGCCAACCGCCGCAGCG
TCTTTGCCTACAGCTAG
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