Trimin1|353912|estExt_Genemark1.C_Ctg_1950019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353912
Unique NameTrimin1|353912|estExt_Genemark1.C_Ctg_1950019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length689
Homology
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A836CIF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF2_9STRA)

HSP 1 Score: 933 bits (2412), Expect = 0.000e+0
Identity = 688/688 (100.00%), Postives = 688/688 (100.00%), Query Frame = 0
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 688
            MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS
Sbjct:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTPSESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 688          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: D8LLC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC8_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.670e-60
Identity = 243/737 (32.97%), Postives = 313/737 (42.47%), Query Frame = 0
Query:    3 KKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVP---LPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGADDDFS---------GSDGELDDPSEFSTPSESGSYSGDAPTAD-----------AAAA-------------ALLAAQFEATLAEYDSDTWGEGGXXXXXXXXXXXXXXXXXXXXXXXXXGAQIGALADAYMDEFLREQADLNWFAGLGRRTADVPRVWQGERATQGEDG---------------SXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAPCGLSGPRLGSLRGLNSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRRLAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS 688
            KKKFI+  + TT+ +VHRSQ DKA  EG+E +ASEFVL+P+G  +  R    R     A  G G GG      R+HINA                        LP+DG  YDY+ HLK+MGGGTF++K G+V         G    G +  +P E+LP+ E  + R L A+TIS+KVMD DM                                          E++D+         +DDFV+QAAG G  +DGGFDFDAH+ARL+ AS +E GLR R  DDD            SD E DD  +     + G+ S D+   D           AAAA             A+L +QFEATLA YDSD WGE                             +    A+  MD+FL    D  W  G+ R   D   +     A +G                  S        XXXXXXXXXXXX       A A    SGPRLG LRG  +                              X         EE++E +  ++   +Y ++ P E+WDCET++STYSNLDNHP+VL                   V   +      + LS KTGLP+GVL +       + D G  S             N+GE R   ETAEEK+ RKA+IK  +R KR +K  +K  F    K  +  L N E    RSVF+YS
Sbjct:    4 KKKFIDKKESTTFHVVHRSQQDKAN-EGEE-EASEFVLIPSGPPRDSRPQDERKA---AGKGKGKGGVA-GAERDHINALG----------------------LPNDG--YDYDQHLKSMGGGTFVSKTGKVQHFAEGNSQGARGGGAKPAIPEEALPSGET-LDRQLEAVTISEKVMDGDMRRALAAGLADVGE-----------------------------EDWDD----ESNMLDDDFVVQAAGAG--EDGGFDFDAHVARLMEASAKETGLRQRSRDDDLQTKGLVRLRRDSDSESDDSEDDVATLDGGAGSDDSGEIDDALLEGLDISGAAAAGGGVPGEGTEEDRAVLDSQFEATLAAYDSDEWGE---------------LEEDDDRVQGRWDLEQHDYANTCMDDFLAANEDARWTEGVQRLPPDQRSIAAATLAIEGXXXXXXXXXXXXXXXXXXSVGDAGRAGXXXXXXXXXXXXGVGPSVEAAAKTATSGPRLGKLRGFGA---------------------------VPVXXXXXXXXXGEEDDELH-DMEHHNEYLREKPAEQWDCETIVSTYSNLDNHPSVLGTGRKAKPGRARRSPVAEGVGGGDASTVQQVALSAKTGLPLGVLPERT-----YNDTGMVSL--------IAGKNKGEKRDTEETAEEKRRRKAQIKLNKRDKRVQKKNVKTAFTSEAKVISHALANPEAPQNRSVFSYS 618          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S0XBI8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBI8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.590e-16
Identity = 88/290 (30.34%), Postives = 119/290 (41.03%), Query Frame = 0
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGA------DDDF 284
            MGKK FI+  +G TY +VHRSQ D A A  +E   S++VL+PA ++       +     +    +     ++T   +HIN                         L     GYDY  H+K + GG FI   G +   P+  +        +P + LP+ E E  RNL AI ISDK MDDD+                                           +FD  E       +DDFV+Q   +    D  FDFDAHIARLIA SE+++G  P  A      DDDF
Sbjct:    1 MGKKPFIKKSEGQTYHVVHRSQTDSAYA--NEEKPSDYVLIPA-QLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHIN------------------------HLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVKEIE------IPEDLLPSAE-EFDRNLEAIVISDKYMDDDIRNAL---------------------------------------DFDGDEDGEFEELDDDFVIQVMAEPEVPD--FDFDAHIARLIANSEKDLGYVPARAHVTDTDDDDF 215          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S0XBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XBG0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.130e-15
Identity = 84/280 (30.00%), Postives = 115/280 (41.07%), Query Frame = 0
Query:    1 MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRRIATRRNGGTNAQHGSGGGGARYTVAREHINAFXXXXXXXXXXXXXXXXXXXXXXXLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAVLPAESLPAEEGEVARNLAAITISDKVMDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEFDELEXXXXXXXEDDFVLQAAGDGGDDDGGFDFDAHIARLIAASEREVGLRPRGA 280
            MGKK FI+  +G TY +VHRSQ D A A  +E   S++VL+PA ++       +     +    +     ++T   +HIN                         L     GYDY  H+K + GG FI   G +   P+  +        +P + LP+ E E  RNL AI ISDK MDDD+                                           +FD  E       +DDFV+Q   +    D  FDFDAHIARLIA SE+++G  P  A
Sbjct:    1 MGKKPFIKKSEGQTYHVVHRSQTDSAYA--NEEKPSDYVLIPA-QLSNNDNRRKFKDNQSVYSNNSIDFKQFTRKGDHIN------------------------HLGFKNDGYDYSKHIKVVDGGKFIGLNGELLERPVVKEIE------IPEDLLPSAE-EFDRNLEAIVISDKYMDDDIRNAL---------------------------------------DFDGDEDGEFEELDDDFVIQVMAEPEVPD--FDFDAHIARLIANSEKDLGYVPARA 205          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2KVM0_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVM0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.300e-12
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = 0
Query:  520 YFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNAETANR---RSVFAYS 688
            YF +     WDCE++LSTYSNLDN+P V+  +                 +      P  I LS KTGLP+GV ++  + ++   D  G    D+        VNRGEAR + E+  +KK RK  +KEER++ R +K  +K  F++    E +  G AE  +     SVF Y+
Sbjct:  228 YFSQTSRNPWDCESILSTYSNLDNNPVVIGRSKKRKGKKKIGKDLADEESRIPEEEPVQIKLSNKTGLPLGVFDNYNQSQSPEEDHYGYGETDT-----FLSVNRGEARDKQESNMDKKVRKLTVKEERKICRMQKKMMKEAFKD----EFQKRGTAEVVDAVGGASVFRYT 390          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2R514_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R514_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.440e-11
Identity = 64/182 (35.16%), Postives = 84/182 (46.15%), Query Frame = 0
Query:  512 VPIDETF----DYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREG-GKAEARVLGNAETANRRSVFAYS 688
            +P +E F     YF +     WDCE++LSTYSN DN+P V+                   V       PA I LS KTGLP+  +  A                    DD    VNRG+AR RGE+ EEKKARK  +K+E+ + + +K  +K  F E   +    VLGN      +SVF YS
Sbjct:  411 LPPEEVFIDGKSYFTQRTVNPWDCESILSTYSNCDNNPAVIGR----NRKKKSSKPKETGVEGIPEDQPAQIRLSNKTGLPINTMPTAYTD-----------------DDTLASVNRGQARRRGESKEEKKARKQGVKQEKLIAKFQKKIMKEAFAEEFDRRSTSVLGN--DVGGKSVFRYS 569          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A7S2KP15_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KP15_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.180e-11
Identity = 65/190 (34.21%), Postives = 91/190 (47.89%), Query Frame = 0
Query:  500 LAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFR-EGGKAEARVLGNAETANRRSVFAYS 688
            LA L+  EE+  +   +   YF+++    WDCE++LSTYSNLDN+P V+  +                 +      P  I+LS KTGLP+GVL   ++    H   G             P+    E R RGET EE+KARK R+K+ ++  R +K  +K VF  E  K  A  L  A+      VF YS
Sbjct:  345 LAELEPPEEDVLI---DGKSYFEQSTINPWDCESILSTYSNLDNNPAVIGHSRRRRLKKKKNALDVDSTSGE----PKKILLSSKTGLPIGVLPTTQKAEKTHESRG-------------PKA---EQRKRGETPEERKARKERVKKNKQEARLQKRVMKGVFADEFAKRSASTL--ADDVGGVPVFRYS 509          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A2X0MR88_9BASI (BQ5605_C041g11959 protein n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MR88_9BASI)

HSP 1 Score: 75.5 bits (184), Expect = 1.800e-10
Identity = 68/181 (37.57%), Postives = 91/181 (50.28%), Query Frame = 0
Query:  500 LAALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSD----GDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGNA 676
            LAA++ + +EA            + P+ERWDCETVLSTYSN+ NHP +L                   V        + I L  KTG P+  +  A   RA  R G G + GD++    GDD APRV     R R ETAE+K+ARK+ +KE+R  +R EK + K  F +    + RV G A
Sbjct:  441 LAAVERQRKEARARKGNESIDIDERPKERWDCETVLSTYSNISNHPRLLR------------------VKGGPTSRASRIRLDEKTGFPI--VGSA--VRAGLRAGSGETIGDAEDEDEGDDEAPRVET-IKRPRDETAEDKRARKSAVKEQRSARRXEKKSTKDEFSQEMTRQKRVAGRA 598          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: C3ZI23_BRAFL (Protein LTV1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZI23_BRAFL)

HSP 1 Score: 73.2 bits (178), Expect = 2.110e-10
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 0
Query:  525 PEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDA--RRQRAEHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGN 675
            P+E+WDCE++LSTYS L NHPTV+                       +P     I+LS+K+G+P+GVL      +++ E  D        S+ ++ + R+    AR +GETAEEKK RK  +K ERR +R EK A K  F+E    + +V+ N
Sbjct:  157 PKEKWDCESILSTYSTLYNHPTVIKDPP-------------------KPKKGKQIILSQKSGIPIGVLGGKGLTKKQLEDLDSMDEELESSEDEEESERIPA-PARRKGETAEEKKLRKQAVKAERRERRMEKKANKLAFKEEVSRQEKVVMN 289          
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Match: A0A6P5AFU4_BRABE (Protein LTV1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AFU4_BRABE)

HSP 1 Score: 73.6 bits (179), Expect = 5.000e-10
Identity = 54/162 (33.33%), Postives = 83/162 (51.23%), Query Frame = 0
Query:  515 DETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSAAXXXXXXXXXXXXXXXXVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRAEHRDGGGSSSGDSDGDDGAP-RVNRGEARARGETAEEKKARKARIKEERRLKRGEKAAIKAVFREGGKAEARVLGN 675
            DE      + P+E+WDCE++LSTYS++ NHPTV+                       +P     I+LS+K+G+P+GVL      + +  +      G+S  ++     +    AR +GETAEEKK RK  +K ERR +R EK A K  F+E    + +++ N
Sbjct:  309 DELVKMVTEQPKEKWDCESILSTYSSIYNHPTVIKDPP-------------------KPKKGKQIILSQKSGIPIGVLGSKGLTKKQLEEQDRLEEGESSEEEEMEITIRSAPARKKGETAEEKKLRKQAVKAERRERRIEKKANKLAFKEEASRQEKIVMN 451          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353912 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIF2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLC8_ECTSI1.670e-6032.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0XBI8_9STRA5.590e-1630.34Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S0XBG0_9STRA1.130e-1530.00Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2KVM0_9STRA6.300e-1234.30Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S2R514_9STRA5.440e-1135.16Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2KP15_9STRA6.180e-1134.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2X0MR88_9BASI1.800e-1037.57BQ5605_C041g11959 protein n=3 Tax=Microbotryum Tax... [more]
C3ZI23_BRAFL2.110e-1036.60Protein LTV1 homolog n=1 Tax=Branchiostoma florida... [more]
A0A6P5AFU4_BRABE5.000e-1033.33Protein LTV1 homolog n=1 Tax=Branchiostoma belcher... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007307Low temperature viability protein Ltv1PFAMPF04180LTVcoord: 11..233
e-value: 8.6E-7
score: 29.1
IPR007307Low temperature viability protein Ltv1PANTHERPTHR21531LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATEDcoord: 1..669
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 590..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 595..610
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..372
NoneNo IPR availablePANTHERPTHR21531:SF0PROTEIN LTV1 HOMOLOGcoord: 1..669

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_195contigContig_195:201375..209291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353912mRNA_17277Tribonema minus UTEX_B_3156 mRNAContig_195 200957..209291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353912|estExt_Genemark1.C_Ctg_1950019 ID=Trimin1|353912|estExt_Genemark1.C_Ctg_1950019|Name=jgi.p|Trimin1|353912|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=689bp
MGKKKFIESGKGTTYRLVHRSQLDKAAAEGDEGDASEFVLVPAGEIKQRR
IATRRNGGTNAQHGSGGGGARYTVAREHINAFAQHGSGDGGARYAGVRDH
INAFGLPDDGTGYDYESHLKTMGGGTFINKEGRVGSVPLPGDAREGRRAV
LPAESLPAEEGEVARNLAAITISDKVMDDDMRAIITGESLPAEEGEVARN
LAAITISDKVMDDDMRATITGEVEEFDELEVEEFDELEDDFVLQAAGDGG
DDDGGFDFDAHIARLIAASEREVGLRPRGADDDFSGSDGELDDPSEFSTP
SESGSYSGDAPTADAAAAALLAAQFEATLAEYDSDTWGEGGGDGDAAEGE
EEGEDEGEGDEGEGEGGAQIGALADAYMDEFLREQADLNWFAGLGRRTAD
VPRVWQGERATQGEDGSGGSSSSAQQHRQEGEHGASAGAEAEAAAQAPCG
LSGPRLGSLRGLNSRGGTGGGGAEGAEGGSEGAGGAGAAAAAAAAPRRRL
AALDEEEEEAYVPIDETFDYFKKAPEERWDCETVLSTYSNLDNHPTVLSA
AAAKGARRRAGGGSASSVAASEPLHPAPIVLSRKTGLPVGVLNDARRQRA
EHRDGGGSSSGDSDGDDGAPRVNRGEARARGETAEEKKARKARIKEERRL
KRGEKAAIKAVFREGGKAEARVLGNAETANRRSVFAYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007307Ltv1