mRNA_16901 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353765
Unique Name	mRNA_16901
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353765 vs. uniprot
Match: A0A835Z540_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z540_9STRA)

HSP 1 Score: 1132 bits (2928), Expect = 0.000e+0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 3

Query:   66 MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD 1775
            MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD
Sbjct:    1 MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD 570

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BLAST of jgi.p|Trimin1|353765 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.530e-37
Identity = 141/485 (29.07%), Postives = 220/485 (45.36%), Query Frame = 3

Query:    3 LSDYLLGTDAPWAATARQLRAMYAAQQVRGCQSYIFF----------SQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGR----LERAGPVAEME----------------------LEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKR----LLTA---PSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGE-TEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKR 1325
            L D +  T+       R L A    Q++R  Q YI F          S+L+G  +   W  W      +L++ P+  V+  +    + +   +M  ++ A++ G  ++ D TF+ A +V D + + + F++G     L      +E E                      L ++ DD CC+G  DVTK+  V IF +V+RAPL D FH  Q +  +T+S  H  +  +AR   G +  ++KPD D VVE   +  K    +T A A+     K   R V  +   +  E +A +++ V    +   EG +R    LL     P +   +    E  +L+ +C+RKGC +DP PV++MY  +G   +  LK Y  KGG+ KNE+ H  LN + S +S       ++R+   + R+NLD DRK GR  +H  T   W     N  A   L A PFP   P P  +       E MG++Y  R    R
Sbjct:  303 LLDMVSATEGDTPGFHRLLVARDQGQELRDMQRYIRFAEEEQARERRSRLDG--EFTKWPGWRFNR-GTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEA-QCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAVVEYLMRENKR---MTRAEAERKAKSKSMSRYVRTVSRPIE-ETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLI-SCLRKGCGQDPLPVDKMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVYRFNLDKDRKLGRASKH-STLWVWRERDINDAARKCLVAEPFPKAGPRPD-VQQEDLDAEPMGFEYAKRLREDR 776

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353765 vs. uniprot

BLAST of jgi.p|Trimin1|353765 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z540_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FLQ5_ECTSI	1.530e-37	29.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_182	contig	Contig_182:270954..278602 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353765\|estExt_Genemark1.C_Ctg_1820035
Hectar predicted targeting category	other localisation
TranscriptId	354087
Track	FilteredModels1
ProteinId	353765

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353765	gene_16901	Tribonema minus UTEX_B_3156	gene	Contig_182 270954..278602 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353765	Trimin1\|353765\|estExt_Genemark1.C_Ctg_1820035	Tribonema minus UTEX_B_3156	polypeptide	Contig_182 270954..278537 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16901_8	exon_16901_8	Tribonema minus UTEX_B_3156	exon	Contig_182 270954..271013 -
exon_16901_7	exon_16901_7	Tribonema minus UTEX_B_3156	exon	Contig_182 271650..271718 -
exon_16901_6	exon_16901_6	Tribonema minus UTEX_B_3156	exon	Contig_182 272947..272980 -
exon_16901_5	exon_16901_5	Tribonema minus UTEX_B_3156	exon	Contig_182 273670..273784 -
exon_16901_4	exon_16901_4	Tribonema minus UTEX_B_3156	exon	Contig_182 274414..275218 -
exon_16901_3	exon_16901_3	Tribonema minus UTEX_B_3156	exon	Contig_182 276611..276799 -
exon_16901_2	exon_16901_2	Tribonema minus UTEX_B_3156	exon	Contig_182 278009..278148 -
exon_16901_1	exon_16901_1	Tribonema minus UTEX_B_3156	exon	Contig_182 278237..278602 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16901	CDS_16901	Tribonema minus UTEX_B_3156	CDS	Contig_182 278237..278537 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_16901	UTR5_16901	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_182 278538..278602 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_182:270954..278602-
coding sequence from alignment at Contig_182:270954..278602-

spliced messenger RNA

>mRNA_16901 ID=mRNA_16901|Name=jgi.p|Trimin1|353765|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1778bp|location=Sequence derived from alignment at Contig_182:270954..278602- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCTTAGCGACTACCTGCTCGGAACCGATGCACCTTGGGCGGCAACCGCT
CGGCAACTACGCGCCATGTACGCAGCTCAGCAGGTGCGCGGATGCCAGTC
ATACATCTTTTTCAGCCAGCTGGAGGGACCGGTGCAGGGCGTACTGTGGC
TTGCATGGGTGCACCCTGAGGACAGCAGTCTGCTGGCGGCTCCCACTGCG
GTTGTCGTGAAACAGCTGTTCAACGACTTCTACGGACGCAGTGCGCCATA
CATGGACGCAGACATGAGGGCTAGGCTGCCCGGCGTGTGCATCAGCATTG
ATGCCACATTCAAGCTCGCATTGCGAGTGAACGACAGCAGCATGAAGGCG
ATCATCTTTGTGCTCGGGAGACTAGAGCGGGCGGGGCCGGTAGCAGAGAT
GGAGCTAGAGTTTGTGGTGGATGACCTATGCTGCCAAGGCGCCCACGACG
TGACCAAACACCCTGTGGTGACTATCTTCAAGAACGTGAAACGAGCGCCG
CTGAAGGACAGATTCCACGGCATTCAGGTCATCGTGACATCCACGTCATC
GAGTATGCACCCTGACCAGCAGGACTTTGCCAGGGATACCGCTGGCGTCA
TAGCTCATCGGCACAAGCCGGACACTGACAAGGTCGTCGAAGCTGCCACC
CAAAGGAAGAAGAACCCGCTCACGCTGACCGCAGCACTGGCCCAGGCGCC
AAACCTGCACAAAGAGTGCCAACGCTCAGTGGGCCGCTTGGGTGACATCG
TACACGCGGAGCTGATGGCTACCATAGCAAAGTGGGTGGCCAGCGATCAG
AAAAAGGTTCAGGAGGGAGGGAAACGGCTCTTGACAGCACCAAGCGAGTT
CAGGCAGAAACCCACAACTGTCGAGCAGGTTGCCCTGGTGGGCAACTGCG
TCCGCAAGGGGTGCTATGAGGACCCTAAACCTGTGGAAGAGATGTACACG
GAGATCGGTGAGACCGAAGATGGACTGAAGATATATCAGTTCAAGGGCGG
GAGCGGCAAAAATGAGGCATTGCATGGGCAGCTCAACAACATCGTGTCTC
AGATCTCAGTCACGACCGGCGACAGCCTAGAAAAGCGCATCAACAACCGG
CTTCAGCGGTACAACCTGGACTGTGACAGGAAGCATGGGCGGCTGCCCGA
GCATGTGAAGACCAACGAGCCGTGGATTGCAGACAGGGCTAACAGACTGG
CCAATGGGGTCCTGGAGGCACCCCCTTTCCCCGGACTGGCACCATCGCCT
CAGCCGCTCAACAGTAACACCGCAGGATATGAGCTGATGGGGTATCAGTA
CCTGCTGCGTACTCTCAACAAGCGCACGGCAAATGCAGCAACAGCAGCAG
CGGCGGCAACACCAGCGGAGCAGGAGCCGATGTTGGGCGCAGCTGCGCCC
GACAGAGATGAGGAACCTGCCCCAGGGTTACGCGTGGGAGACATGCAGCT
CGGGTCAGACGAGGAGCTGCATGCGGCGGGGGACGTGCCACTCAATGCAG
CACCGGCCACCGAGGAGGAGAAGGACTTGATGATTGACGTGCTGGCAGGG
CCGGCAAACAACCCGCACCCAAACTATGAAGCCCTGGCCACGGAGTACAA
CAAGCGTGCAATGCGCCTGGGCTACCTGCACTGCCCATGGTCGATGCCGC
GGCGCCAGCAGCCCGAGACAGCAGAGTTCTGGGCAAGCGGGCAGCAGGAG
CAGCAGCAGCAGCAGTGGACAGGGGGCTTTGGGGATTATGTGGGGGAGGA
CTTTGGCGAGGGGCAGGAGCTGGATTGA

protein sequence of jgi.p|Trimin1|353765

>Trimin1|353765|estExt_Genemark1.C_Ctg_1820035 ID=Trimin1|353765|estExt_Genemark1.C_Ctg_1820035|Name=jgi.p|Trimin1|353765|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=571bp
MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQ
LFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVL
GRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRF
HGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKN
PLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQE
GGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGET
EDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYN
LDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNS
NTAGYELMGYQYLLRTLNKRTANAATAAAAATPAEQEPMLGAAAPDRDEE
PAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNP
HPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQ
WTGGFGDYVGEDFGEGQELD*

mRNA from alignment at Contig_182:270954..278602-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16901 ID=mRNA_16901|Name=jgi.p|Trimin1|353765|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7649bp|location=Sequence derived from alignment at Contig_182:270954..278602- (Tribonema minus UTEX_B_3156 )
GGCTTAGCGACTACCTGCTCGGAACCGATGCACCTTGGGCGGCAACCGCT
CGGCAACTACGCGCCATGTACGCAGCTCAGCAGGTGCGCGGATGCCAGTC
ATACATCTTTTTCAGCCAGCTGGAGGGACCGGTGCAGGGCGTACTGTGGC
TTGCATGGGTGCACCCTGAGGACAGCAGTCTGCTGGCGGCTCCCACTGCG
GTTGTCGTGAAACAGCTGTTCAACGACTTCTACGGACGCAGTGCGCCATA
CATGGACGCAGACATGAGGGCTAGGCTGCCCGGCGTGTGCATCAGCATTG
ATGCCACATTCAAGCTCGCATTGCGAGTGAACGACAGCAGCATGAAGGCG
ATCATCTTTGTGCTCGGTGAGCGGCATGACGTGGTGTCATGGGCAGCAGT
TACGCGGGAGAGCTATAGTGAAATCGCCGACTGCTTGCAAGGGCTAGCTA
GCAGGGAGACTAGAGCGGGCGGGGCCGGTAGCAGAGATGGAGCTAGAGTT
TGTGGTGGATGACCTATGCTGCCAAGGCGCCCACGACGTGACCAAACACC
CTGTGGTGACTATCTTCAAGAACGTGAAACGAGCGCCGCTGAAGGTATGT
ACTTCATTACTCATGCACTAGAATCTTTGATGTAGTGTATATGTAGGATG
TTAGATTATCACATGTGAGTTAAGAATTGCTGACAGCGACCTCTTGTGCC
ATCAAGCATACTTAACACACACTACATGTTCTATTCGGCAAGATGGCAGA
GGAGCTGGTCGCGGAGGGCTGCGCGCCAGAGATGTACATGCATGGTGTGC
TGCTGAGGGAGCTACGTTGCTATGCGCGGGAAGCCTACACTGGCGGCAGA
TTGAGTGCAATAGAGCTTCTATGAGAATCTCACACTTTGAGGTTGCACCT
CGCATTATGGAAACACAAGCAGTGTGTGAGGCTCGAGATCTCGGTTATCT
CTTACACAAGCGTGCAACCTTCTTCTTACCATCGCTAACCATAAGTCGTC
GCTTATACGCAAACTTGCAGCGGCTTTTACAGTCAACTGACTCCTTGTAT
CGAAAAGGGCCACGAGAGAGGCTGGTTGTCTCTGCGCAAACATCGATAAT
CTGTACGCGGCACTGTTTCAGCAGCCGTTTTCAAGCAGTGCCGTGTACAT
GACACACCTGGTGTTCAGCAACGGCATGACTCTCACCAGTCTGCGTGCGT
CAGAAACGTACAAGATATACGTGAGGCACACATGTGCCTTATGTATCAGC
AAGTCAAAGACAGCTTTGTTGTCCAAAATCTCCATGCTGCTTACGAGAGC
AGCTGCACATGTTGTACAGAATGGTGAAAATGCTTGGCGTCTCTCGTATA
ATCATCATCACAATACAACTAGGACCTTGACTGCACGTTTTCATGGAGCG
TATGCATGCATGCAGCATCCTACTGCAGACACCATACTGCAGACAGCCAA
TACTCATCCAAAGCAAATACAGTCTCAGGTACAAGCATTGTACAGTGTGC
ATGCTGTGTTTTTGCAGGGCACATCACTTCAGAATGGTCCCTTTGAATGC
GCAGTCACGCAATAAGGAATAATATGCACCGAGAGAGCATATGCAAACAC
CACATTAGCAACACCACATTAGCATAGTTGATTACGCATGCTGCATGCAA
GTGTATATGTGAACACATTTCACAGGTCCATGCACACAACAAAAGAAAGA
GGAAAAACTGCATGTGCAGTAAGTGGTCATTGTGAGTTCAACTGCTATTA
CTGCTGATCGTAAGTTAACTGCACACTGTTGTATCGTTGCCTTCTATGAG
CAGGACAGATTCCACGGCATTCAGGTCATCGTGACATCCACGTCATCGAG
TATGCACCCTGACCAGCAGGACTTTGCCAGGGATACCGCTGGCGTCATAG
CTCATCGGCACAAGCCGGACACTGACAAGGTCGTCGAAGCTGCCACCCAA
AGGAAGAAGAACCCGCTCACGCTGACCGCAGCACTGGCCCAGGTATGCAT
GCACAACAGAGAGAACGTCAAGTATGCATGCAACAACGGTGTCAGAAACG
TGTCAGTCACCTCGTGTGCCTAAAGGCTTACACTATAGATTTCATCCAGT
GAGCCGGCCTGTTTCCTGTAAAAATTGCTTTAAAGGACATCGGGATGTCG
CGCAGTACAGCTGTGTGGTCAGCCTCGTAGCAGATGGCGCTCCCCACGTA
TGATGCACCACATCGAGGCAACGAGGCAGACAGGAGGCCACGGGGGCTAC
ATGGGGGAGGGCCCTGGAAGGAGGGGAGGAGTTGGATTGCAATGGGATAG
GCTAGATGTTATAGCCAGATTTCGATGTGGTGATGTTTTGTTATATATTA
ACTTTATTTGCAACTGCAGTTGCTGGTCAGGCCAAAGGACTGTGCACCTA
CACATAGTGACACAAGCAAGTTGTGATTGCGCTACCTTGTAATCTATCAT
AGTAGTACTACTATGACCTACACAAATTAATAAAAGTACTACTAGGGGTT
GTGGACCTACACATAATGGTGAGCTGTGGTGAGCGATTGTAGAAAAAACT
TTGTAGTTTCCATGAAAGTACCACTAGTTGCAATGATAATAAGAACAACA
GCAATATTATCCCGATATATTGGAGATAATGATGATATGTCAAATAAATG
ACGATTGCTGAAAATTTGGCATATTCTTTGTGTACGTTGGATTTGTTGCA
AATGGCGGTCTCTGTGAGAATTTGGCAGTTCCTGGTGGCGCGAGTGTACG
ATGTACCCGAGGCAGGAGCAGGGGACGGCGTGGGTATTGTGAGCGGTGCC
ATTACAGCGTAATCGTGGGAGACCCGGGGGGCTTGGTCCCAGTACTGAAG
TGCTCTGCTGCATTGCAAGAGCAACAAGTGTAAATGAACAAAATTGTGTG
AAAAGAACAACAATGTATAGCAAAAAAAATGTACACTATGTATGCCGGTC
ATTTTGGAATAACCTTGTGAAAAACTGTGAGTGCTTGATCAAGTGCCAAA
TGTAGCTCTGAAATTTTGAGGCCAATAGAGTGCATGTCACTACCAAACGT
CTGCTGGCAGTTTTGGGCACTGTTAGACAGCAAGTTGGCTTTGAATACAC
TGATAGCCATGCAGTATGCAATGCGTATATTGGTAGATTGCTTGTCAGCA
TTCTTGGAGTCATGTCATGTATGTCATGTATACAAGAGACACATGGTGAT
GGCATGCTCTGCATGTAGTACGACGACGCAATCAGGCAATACAGGAGTTG
TGTGGACGAGGGCCTTGGGGGGGCAACGGAGCTGACTGAAAATGAAGGGT
TCCTATTCCGCAATATCAGCGAGAGCGTCCCAACCTCGCAGAAAGTGTTT
GTGATGTTACCAACCTTTCTGTGACTTCGTGCAGGCGCCAAACCTGCACA
AAGAGTGCCAACGCTCAGTGGGCCGCTTGGGTGACATCGTACACGCGGAG
CTGATGGCTACCATAGCAAAGTGGGTGGCCAGCGATCAGAAAAAGGTTCA
GGAGGGAGGGAAACGGCTCTTGACAGCACCAAGCGAGTTCAGGCAGAAAC
CCACAACTGTCGAGCAGGTTGCCCTGGTGGGCAACTGCGTCCGCAAGGGG
TGCTATGAGGACCCTAAACCTGTGGAAGAGATGTACACGGAGATCGGTGA
GACCGAAGATGGACTGAAGATATATCAGTTCAAGGGCGGGAGCGGCAAAA
ATGAGGCATTGCATGGGCAGCTCAACAACATCGTGTCTCAGATCTCAGTC
ACGACCGGCGACAGCCTAGAAAAGCGCATCAACAACCGGCTTCAGCGGTA
CAACCTGGACTGTGACAGGAAGCATGGGCGGCTGCCCGAGCATGTGAAGA
CCAACGAGCCGTGGATTGCAGACAGGGCTAACAGACTGGCCAATGGGGTC
CTGGAGGCACCCCCTTTCCCCGGACTGGCACCATCGCCTCAGCCGCTCAA
CAGTAACACCGCAGGATATGAGCTGATGGGGTATCAGTACCTGCTGCGTA
CTCTCAACAAGCGCACGGCAAATGCAGCAACAGCAGCAGCGGCGGCAACA
CCAGCGGAGCAGGAGCCGATGTTGGGCGCAGCTGCGCCCGACAGAGATGA
GGAACCTGCCCCAGGGTTACGCGTGGGAGACATGCAGCTCGGGTCAGACG
AGGAGCTGCATGCGGCGGGGGACGTGCCACTCAATGCAGGTAGACAGCGC
CACGAGCGGCTCGCAGGTAAATAAAACCCTTCATGTCCACGTATGACTCT
GTACATCACTTTCATGACAATGAAGATATAACGTTGTTTAAAGTGTAATG
AGTGAAGGAACCTACTTGTACGACATTACAATAGTCATGCTTCTGTTCAA
TGTGTTTCACCGCATGCAACACCATCTGGGCAGCATCTCCATAGTCCTAC
AATGGCGGGGAGGGGGGGGGGGGCTCACGTCATACGGTGCTGTGTAGCGC
ACATTAGGAGATTTCTGTGATGCCACCATAGGATGACCAGTGGTAATACA
GGCACAGTGCGCGTCTTCTTCCCTTCCCCTGTGAGTGTTGCCACACAACT
GTTGGTGACTTGCTTCAGCAGTGATGATCAATGCAGCAGCGACAATTAGA
TAAGTAAGTACTTACTTATTCTTGCCTGCGACTCATACAAAAATGTTGCG
CCCTCGATGCAGAACCACGTGAAGCTCCAGGCACGCATGCCAGCGGCTCC
ATCGCAAGTACGTCAGGCACAGTGCAAGCGGCTTCACCTGCATCAAAGCG
GAGGGACAGGACCAAGAGTGAGAAGCATGCCCACGTCACAGTCTTCAGCT
CCCACGTGTGAATCACAGCACCGGCCACCGAGGAGGAGAAGGACTTGATG
ATTGACGTGCTGGCAGGGCCGGCAAACAACCCGCACCCAAACTATGAAGC
CCTGGCCACGGAGTACAACAAGCGTGCAATGCGGTCGATCTTGGACCATA
GCACCGGCTTCCGAGGCATCATGCAAGCAGAAGACATGCAAAAGCAAGCA
CAGCAGCTGGGGCATCGGAGCATCAGCAACGCGAACGCTTGCGCGCATGG
AGCTGCCACCATGGACGTTGGCAACATCAGCGCTGGTAAGCGATTGACCA
ACTAGCATTGATGATGCAAGCGTTTTTAGCAGACCCATGTGAATACCAAG
CAGCTCCAGTGCGTGGTGCAACGGTTGCGACAAGAAGATACGCATGCCAT
GCCATGGATCGATGCACAGATTCTCGGTGTATGAGTTAAGCTACTCGCAA
ACTACTGATGTCAGTTGACATACATTGGTGTGCTTAATTAATGCTGAAAT
TTGCTGCATTCAGGTGCGGAAGGAGTCACGACAATGCCAGCACAACTGAG
CATGGCACGCAGCGTCCCTGCCGTCAGCAAGACTGCGTCAAGAGCCCCAA
CAAGCGATGGTGAGAATGTCTGTGGCAGTAGTGATGAAGAGGTGGTTTGC
CAAGCTGCCGATAACAAGGCACCTCTGCAAATATTTGCATGAGACCATGT
CCGTTACATGCCGCTGCTGCACCAGACTCATGATCGCCATACTGTTCCGC
ATCTGCTGCATGTGCGCCGTCGCAGGTGGCAATGATAGCGTAGCTATGCT
AGCTGCAGCTCCCAGCCTGCAGCCTGGGCTACCTGCACTGCCCATGGTCG
ATGCCGGTAAGTGATTTGAGCTGCAAATTTACCTTGGCAAGTATATGATT
GATTGCAGCACAGTGTTTGTCGCCACCACTGCGTATTCACTTAGCCTTGT
TAGACTGCCGATGCAGCTGTGCATGCACGCGCCAGTATGACATATTGATA
TTCAAAGATTTGCTGATATTCGTTGCAAGTTTTAGAGTTTGCTGCAGTAC
GTACGGATTGTGTCCTCACCCGCTCCAAGAGTTTTACAGTGTGTCAAATT
TTTATGTCATCTCCTTGCGCGGCATAAACCTTCATGCTCGCATATAGATG
CTGTTGCCCTCGCTGACACGCAACAACTGAGAAATCCTTTACGGAGTACT
AGACAGTCAAGGATACGCAGACCTAGGTACTTCGTCCCTAGGAACTTTCA
CACAGTAAGCAGCACCTCAAAGTAAGTACCTCACAGCGGTAGGTGCGACC
CCAACGTTGCCTTCACACTTCTGTTGATGTGCGAATAAGGGTAGGGCGAC
TGCATTTGCGCAATTGCAATGCCGCTGCTGCACTCATCTACTTTCATGCG
AACTAGAAAAGGATGGCCCTGCAGCTCTGATGTCTCACTGTGAGTGTGCT
GCCTGCATTTCACATGGCTGCCGAGCAATTGTGCGATGCTGTGCTTGGCA
CTTATCGATGCTTTACGCATAGCGCACCATCGGTGTTTTCAATTTACAAA
TGGTCACTTCCATCCATGCACAACACGTCGATTCACTGTAATTTCTATCC
TCACGGTACTTTTTGCGGCCATGCCCCTTGACACTGCAGGTATGGCTGTG
GCACGCACCATGATGCCAAACACACCGGCTGCACATGGAGCGATGACCGC
ACACCAGCAGCAGCAGCTCGACGGTGAGTGATCACAGTCTCTGCACCATG
ATCATCAACATGACTCCCATGGAACTTGTTCAGAATCACAAGCAGCCAAG
AGAAAGAGAGTGCCAAATAAGCACTTCACCTTTGCACAGCTCTTGACCTC
ATGATGGCTGTGATTCTCATCCATCGACAGCCGCAGTGCGTGTGTATGCG
TGTATCTACGCCGACGAAGCCTATCGCAAGTACTACAAAAACTCCAATTC
CGCAAAGCTTCTCTGGCGCTCACCTCTGACTCCCACACTAACCCTCATCC
CTCCTGCCTCGCACCGCTTCTACTTTGAAACAGCCATATTCGCCGGACTC
CTGCCAACGTCAAACGCCACCCTCTTCGCCCAAGCGGCGCCAGCAGCCCG
AGACAGCAGAGTTCTGGGCAAGCGGGCAGCAGGAGCAGCAGCAGCAGCAG
TGGGTGATGGCAAAAAGACAGCGGGTTTCAAGATGAAAAGATTAGACGGG
ATAACAAAGGACAAATATGTGCTCGACATAGCGGACGTCGCAGAGCTTAA
GGCGGCCTCTCTGGAAGCCTACTGCAAGTCCATGTGCATCGCGTATTCAG
GCACAAGGTTGCAGAAAGCGACAAGAGTCACCACGCACATGAACGCAAAG
GGCTGGCGGCAGTACTGGCACGGCATGGTGGAACAGCAGGCGACAGCAGG
ACCCAAGTTGCCAGACGATTATGTGCAGAATGCACGCGCTGCGCACCATA
TTGCGTAGCACCAACAGCAGAGCAGCAGCAGCAAAGCAGCAGCAGCAGCA
GCAGCAGCACAAACCAACCTTGCACTCACCAAAAAGCAAAGTGAGCTCTG
TCAACGCCAGGTGTTTTTGCTTGCGAATCCGTTGAGCAGCAGATTCTCAT
CTGCTGTCCAGCGTCGCCGCGTTCTGCTGCTGTGTCTGCTGCGTGCTAGC
GCATGTGTCAGCTGTGTATATCGGTGCGACATCGGATGGATAGGTCGGAT
AGATAGACAGAAAGGCCTCGGCCTAGCCAGTACACTTTTTGATGGCGATT
TCAGCATGCGTGATGGGCCACATGGCTGCCACACGGGAGACAGGGGGCTT
TGGGGATTATGTGGGGGAGGACTTTGGCGAGGGGCAGGAGCTGGATTGA

Coding sequence (CDS) from alignment at Contig_182:270954..278602-

>mRNA_16901 ID=mRNA_16901|Name=jgi.p|Trimin1|353765|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1713bp|location=Sequence derived from alignment at Contig_182:270954..278602- (Tribonema minus UTEX_B_3156 )
ATGTACGCAGCTCAGCAGGTGCGCGGATGCCAGTCATACATCTTTTTCAG
CCAGCTGGAGGGACCGGTGCAGGGCGTACTGTGGCTTGCATGGGTGCACC
CTGAGGACAGCAGTCTGCTGGCGGCTCCCACTGCGGTTGTCGTGAAACAG
CTGTTCAACGACTTCTACGGACGCAGTGCGCCATACATGGACGCAGACAT
GAGGGCTAGGCTGCCCGGCGTGTGCATCAGCATTGATGCCACATTCAAGC
TCGCATTGCGAGTGAACGACAGCAGCATGAAGGCGATCATCTTTGTGCTC
GGGAGACTAGAGCGGGCGGGGCCGGTAGCAGAGATGGAGCTAGAGTTTGT
GGTGGATGACCTATGCTGCCAAGGCGCCCACGACGTGACCAAACACCCTG
TGGTGACTATCTTCAAGAACGTGAAACGAGCGCCGCTGAAGGACAGATTC
CACGGCATTCAGGTCATCGTGACATCCACGTCATCGAGTATGCACCCTGA
CCAGCAGGACTTTGCCAGGGATACCGCTGGCGTCATAGCTCATCGGCACA
AGCCGGACACTGACAAGGTCGTCGAAGCTGCCACCCAAAGGAAGAAGAAC
CCGCTCACGCTGACCGCAGCACTGGCCCAGGCGCCAAACCTGCACAAAGA
GTGCCAACGCTCAGTGGGCCGCTTGGGTGACATCGTACACGCGGAGCTGA
TGGCTACCATAGCAAAGTGGGTGGCCAGCGATCAGAAAAAGGTTCAGGAG
GGAGGGAAACGGCTCTTGACAGCACCAAGCGAGTTCAGGCAGAAACCCAC
AACTGTCGAGCAGGTTGCCCTGGTGGGCAACTGCGTCCGCAAGGGGTGCT
ATGAGGACCCTAAACCTGTGGAAGAGATGTACACGGAGATCGGTGAGACC
GAAGATGGACTGAAGATATATCAGTTCAAGGGCGGGAGCGGCAAAAATGA
GGCATTGCATGGGCAGCTCAACAACATCGTGTCTCAGATCTCAGTCACGA
CCGGCGACAGCCTAGAAAAGCGCATCAACAACCGGCTTCAGCGGTACAAC
CTGGACTGTGACAGGAAGCATGGGCGGCTGCCCGAGCATGTGAAGACCAA
CGAGCCGTGGATTGCAGACAGGGCTAACAGACTGGCCAATGGGGTCCTGG
AGGCACCCCCTTTCCCCGGACTGGCACCATCGCCTCAGCCGCTCAACAGT
AACACCGCAGGATATGAGCTGATGGGGTATCAGTACCTGCTGCGTACTCT
CAACAAGCGCACGGCAAATGCAGCAACAGCAGCAGCGGCGGCAACACCAG
CGGAGCAGGAGCCGATGTTGGGCGCAGCTGCGCCCGACAGAGATGAGGAA
CCTGCCCCAGGGTTACGCGTGGGAGACATGCAGCTCGGGTCAGACGAGGA
GCTGCATGCGGCGGGGGACGTGCCACTCAATGCAGCACCGGCCACCGAGG
AGGAGAAGGACTTGATGATTGACGTGCTGGCAGGGCCGGCAAACAACCCG
CACCCAAACTATGAAGCCCTGGCCACGGAGTACAACAAGCGTGCAATGCG
CCTGGGCTACCTGCACTGCCCATGGTCGATGCCGCGGCGCCAGCAGCCCG
AGACAGCAGAGTTCTGGGCAAGCGGGCAGCAGGAGCAGCAGCAGCAGCAG
TGGACAGGGGGCTTTGGGGATTATGTGGGGGAGGACTTTGGCGAGGGGCA
GGAGCTGGATTGA