Trimin1|353765|estExt_Genemark1.C_Ctg_1820035 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353765
Unique NameTrimin1|353765|estExt_Genemark1.C_Ctg_1820035
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length571
Homology
BLAST of jgi.p|Trimin1|353765 vs. uniprot
Match: A0A835Z540_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z540_9STRA)

HSP 1 Score: 1132 bits (2928), Expect = 0.000e+0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0
Query:    1 MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD 570
            MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD
Sbjct:    1 MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGETEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKRTANAXXXXXXATPAEQEPMLGAAAPDRDEEPAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNPHPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQWTGGFGDYVGEDFGEGQELD 570          
BLAST of jgi.p|Trimin1|353765 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 8.830e-37
Identity = 135/460 (29.35%), Postives = 212/460 (46.09%), Query Frame = 0
Query:    5 QQVRGCQSYIFF----------SQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQLFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVLGR----LERAGPVAEME----------------------LEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKR----LLTA---PSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGE-TEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKR 420
            Q++R  Q YI F          S+L+G  +   W  W      +L++ P+  V+  +    + +   +M  ++ A++ G  ++ D TF+ A +V D + + + F++G     L      +E E                      L ++ DD CC+G  DVTK+  V IF +V+RAPL D FH  Q +  +T+S  H  +  +AR   G +  ++KPD D VVE   +  K    +T A A+     K   R V  +   +  E +A +++ V    +   EG +R    LL     P +   +    E  +L+ +C+RKGC +DP PV++MY  +G   +  LK Y  KGG+ KNE+ H  LN + S +S       ++R+   + R+NLD DRK GR  +H  T   W     N  A   L A PFP   P P  +       E MG++Y  R    R
Sbjct:  328 QELRDMQRYIRFAEEEQARERRSRLDG--EFTKWPGWRFNR-GTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEA-QCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAVVEYLMRENKR---MTRAEAERKAKSKSMSRYVRTVSRPIE-ETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLI-SCLRKGCGQDPLPVDKMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVYRFNLDKDRKLGRASKH-STLWVWRERDINDAARKCLVAEPFPKAGPRPD-VQQEDLDAEPMGFEYAKRLREDR 776          
BLAST of jgi.p|Trimin1|353765 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 5.890e-25
Identity = 101/356 (28.37%), Postives = 147/356 (41.29%), Query Frame = 0
Query:  114 LEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRFHGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKNPLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQEGGKRLLTA---PSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEM---------------------------------------------YTEIGE-TEDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYNLDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNSNTAGYELMGYQYLLRTLNKR 420
            L ++ DD CC+   DVTK+  V IF +V+RAPL D FH  Q +  +T+S  H  +  +AR   G +  ++KPD D +VE   +  K      A             R+V R  +   AE+   +      D +  + G   LL     P +   +    E  +L+ +C+RKGC +DP PV++M                                             Y  +G   +  LK Y  KGG+ KNE+ H  LN + S +S       ++R+   + R+NLD DRK GR  +H  T   W     N  A   L A PFP   P P  +       E MG++Y  R    R
Sbjct:  571 LRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAIVEYLMRENKRMTRAEAERKAESKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLI-SCLRKGCGQDPLPVDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVHRFNLDKDRKLGRASKH-STLWVWRERDINDAARKCLVAEPFPKAGPRPD-VQQEDLDAEPMGFEYAKRLREDR 923          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353765 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z540_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FLQ5_ECTSI8.830e-3729.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRE7_ECTSI5.890e-2528.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..570

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_182contigContig_182:270954..278537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353765mRNA_16901Tribonema minus UTEX_B_3156 mRNAContig_182 270954..278602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353765|estExt_Genemark1.C_Ctg_1820035 ID=Trimin1|353765|estExt_Genemark1.C_Ctg_1820035|Name=jgi.p|Trimin1|353765|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=571bp
MYAAQQVRGCQSYIFFSQLEGPVQGVLWLAWVHPEDSSLLAAPTAVVVKQ
LFNDFYGRSAPYMDADMRARLPGVCISIDATFKLALRVNDSSMKAIIFVL
GRLERAGPVAEMELEFVVDDLCCQGAHDVTKHPVVTIFKNVKRAPLKDRF
HGIQVIVTSTSSSMHPDQQDFARDTAGVIAHRHKPDTDKVVEAATQRKKN
PLTLTAALAQAPNLHKECQRSVGRLGDIVHAELMATIAKWVASDQKKVQE
GGKRLLTAPSEFRQKPTTVEQVALVGNCVRKGCYEDPKPVEEMYTEIGET
EDGLKIYQFKGGSGKNEALHGQLNNIVSQISVTTGDSLEKRINNRLQRYN
LDCDRKHGRLPEHVKTNEPWIADRANRLANGVLEAPPFPGLAPSPQPLNS
NTAGYELMGYQYLLRTLNKRTANAATAAAAATPAEQEPMLGAAAPDRDEE
PAPGLRVGDMQLGSDEELHAAGDVPLNAAPATEEEKDLMIDVLAGPANNP
HPNYEALATEYNKRAMRLGYLHCPWSMPRRQQPETAEFWASGQQEQQQQQ
WTGGFGDYVGEDFGEGQELD*
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