mRNA_16681 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A835Z4Z9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Z9_9STRA) HSP 1 Score: 214 bits (546), Expect = 1.820e-70 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVRIR 336 LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVRIR Sbjct: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVRIR 112
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A7S3APJ7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3APJ7_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 2.730e-7 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVRI 333 +P +P +IGK G+ I L+ +GA +E S+GRV I G + AV KA L + E+ A + E+ V R + ++IG+GGA ++A+Q + G ID + A VVR+ Sbjct: 215 VPTQMIPIIIGKGGTTIKRLQQDSGATFDLE-RSSGRVRIFGRSSAVQKALAMLDGLTAEFGAIE---EIEVQPRQIALVIGRGGATIKALQAES-GATIDIRKEACVVRV 320
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A4Y9ZB60_9AGAM (Uncharacterized protein n=2 Tax=Dentipellis TaxID=154746 RepID=A0A4Y9ZB60_9AGAM) HSP 1 Score: 57.4 bits (137), Expect = 3.100e-7 Identity = 36/114 (31.58%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARI----SVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVR 330 +P ++PR++GK G+ IN ++ TGA+I S ED+ + ++T G +A+ AK A+ + + E+ + + + R R +IG GG G++ + +C G D AG+VR Sbjct: 816 VPTQAIPRILGKGGATINEIKDETGAQIDLDKSTEDSGSAQITCRGTKKAINAAKAAIQAIADQVG-EETTVVLKIESRFHRTLIGGGGQGLKDLIARCGGPA-DSRSQAGLVR 927
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: K0RHL8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHL8_THAOC) HSP 1 Score: 57.0 bits (136), Expect = 4.230e-7 Identity = 32/113 (28.32%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARIS-VEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVRIR 336 +P +++ IGK GS I + ++ + +G + I G E V A++A+ + EW A + V + +R++ V+IGKGG +R IQ++ G ++D +R + R Sbjct: 1039 IPESAMSAFIGKGGSGIKKFSSDNQVKMERINKLHSGTIKITGKEENVATARDAVVAWVMEWEASNEGISVDIDERIIPVVIGKGGETIRRIQKET-GCKLDINRQQSTITAR 1150
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A4V3XGG9_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4V3XGG9_9AGAM) HSP 1 Score: 56.6 bits (135), Expect = 5.760e-7 Identity = 37/115 (32.17%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARI-----SVEDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVR 330 +P ++PR++GK G IN+++ TGA+I S E++S ++T G +A+ AK A+ + + E+ + + V +R R +IG GG G++ + +C G D AG+VR Sbjct: 815 VPTRAIPRILGKGGVTINDIKDETGAQIDLDKSSEENSSVAQITCRGTKKAIAAAKAAIQAIADQVG-EEITVVLTVENRFHRTLIGAGGQGLKELIARCGGPA-DTRAQAGLVR 927
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A286UGC6_9AGAM (Uncharacterized protein n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UGC6_9AGAM) HSP 1 Score: 56.6 bits (135), Expect = 5.770e-7 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISV----EDNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMG 291 +P S+ R++G+ GSNIN ++ TGA+I V ED +T G +A+ AK ++ + + AE +A + + R R IIG GG G+R + +C G Sbjct: 821 VPTKSVARILGRGGSNINEIKDETGAQIDVDKSNEDPQITTITCRGTKKAIASAKASITAIAEQVGAEV-TAVLNIERRFHRAIIGAGGQGLRELVTRCGG 920
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: A0A316UYL2_9BASI (Uncharacterized protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UYL2_9BASI) HSP 1 Score: 56.6 bits (135), Expect = 5.780e-7 Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 10 ASLPRLIGKNGSNINNLRTTTGARISVEDNSTGR------VTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMG 291 ASLPR++GK+G+ +N +R TGA+I V+ N +G + + G +A+ AK A+ E E+ A + +P + +IG GG G+R + + G Sbjct: 882 ASLPRILGKSGATVNQIRDDTGAQIDVDQNGSGEKEKTTTIRLRGTNKAIAAAKAAITAIDAEVKGEETFA-IHIPSKYHGQLIGPGGQGIRDLIARATG 980
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: UPI000444933B (SCP160 protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444933B) HSP 1 Score: 56.2 bits (134), Expect = 7.870e-7 Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTG----RVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVR 330 +P ++PR++GK G+ IN ++ TGA+I ++ G ++T G +A+ AK A+ + + E+ + ++V R R +IG GG G+R + +C G D AG+VR Sbjct: 816 VPDRAIPRILGKGGATINEIKDDTGAQIDLDKTQEGGPVAQITCRGTKKAIAAAKAAIQAIADQVG-EETTVVLSVESRFHRTLIGAGGQGLRDLIVRCGGPA-DPKAQAGLVR 927
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: W4K5D3_HETIT (Uncharacterized protein (Fragment) n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K5D3_HETIT) HSP 1 Score: 55.1 bits (131), Expect = 2.000e-6 Identity = 36/114 (31.58%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVE----DNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVPDRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVR 330 +P ++PR++GK G+ IN ++ TGA+I ++ D + ++T +G +AV AK A+ + + E+ + V V +R R +IG GG ++ + +C G D AG+VR Sbjct: 813 VPARAIPRILGKGGATINEIKDETGAQIDLDKTTPDAESAQITCHGTKKAVAAAKAAIQAIADQVG-EETTVVVTVENRFHRALIGAGGQVLKDLISRCGGPS-DTRAQAGLVR 924
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Match: UPI001C7A4C97 (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7A4C97) HSP 1 Score: 54.3 bits (129), Expect = 3.720e-6 Identity = 37/115 (32.17%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 1 LPPASLPRLIGKNGSNINNLRTTTGARISVE---DNSTGRVTINGPAEAVIKAKEALATFSREWSAEKDSAEVAVP--DRLMRVIIGKGGAGVRAIQEQCMGVRIDCDRTAGVVR 330 +P S+PR++G+ G++IN ++ T A+I V+ D S +T+ G +AV AK A+ + + S D + VP ++ R +IG GG G++ + +C G D AG++R Sbjct: 807 VPTRSVPRILGRAGASINEIKDATEAQIDVDRADDASVTNITVRGTKKAVNAAKTAILAIADQVS---DEVHIVVPVENKYHRTLIGAGGQGLKDLVSRCGGPT-DSRLLAGLIR 917 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144673 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16681 ID=mRNA_16681|Name=jgi.p|Trimin1|144673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=336bp|location=Sequence derived from alignment at Contig_183:3573..3908- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGCCGCCGGCATCGCTTCCTCGCCTCATCGGCAAGAACGGCTCCAATATback to top protein sequence of jgi.p|Trimin1|144673 >Trimin1|144673|gw1.183.37.1 ID=Trimin1|144673|gw1.183.37.1|Name=jgi.p|Trimin1|144673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=112bp LPPASLPRLIGKNGSNINNLRTTTGARISVEDNSTGRVTINGPAEAVIKAback to top mRNA from alignment at Contig_183:3573..3908- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16681 ID=mRNA_16681|Name=jgi.p|Trimin1|144673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=336bp|location=Sequence derived from alignment at Contig_183:3573..3908- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_183:3573..3908- >mRNA_16681 ID=mRNA_16681|Name=jgi.p|Trimin1|144673|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=336bp|location=Sequence derived from alignment at Contig_183:3573..3908- (Tribonema minus UTEX_B_3156 )back to top |