mRNA_16672 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A836CHH9_9STRA (WW domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH9_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.290e-66 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 Query: 1 DEDYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 DEDYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER Sbjct: 1 DEDYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 94
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A835Z5F1_9STRA (WW domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5F1_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.890e-40 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 D IILEEEIDP+Y P+ +E+ EYA+WLG+D D+D + WI EGLKAPLPE+WKP + + T EIYYFN TG+STWDHPCD++Y +++EEE+ Sbjct: 32 DSIILEEEIDPNYVPTEEEVMEYAKWLGMDLDKDRGMFWIAKEGLKAPLPEHWKPCKTVDTEEIYYFNFLTGDSTWDHPCDDYYRKLYEEEK 123
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A8K1FED1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED1_PYTOL) HSP 1 Score: 135 bits (339), Expect = 4.390e-38 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 D ++LEE+IDP+Y PS E+ EYA WLGLD + D L WI EGLKAPLP NWKP + L +NEIYYFN ATG+STWDHPCDEHY +++++ + Sbjct: 10 DSVVLEEQIDPNYEPSDDEVLEYALWLGLDVNVDRDLFWIAREGLKAPLPANWKPCRTLDSNEIYYFNFATGKSTWDHPCDEHYKKLYQDHK 101
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: L1JFH0_GUITC (WW domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFH0_GUITC) HSP 1 Score: 126 bits (317), Expect = 9.590e-36 Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 13 IILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 ++LEEE+ Y P+ EI EYA+WLG+D D D +L WI EGLKAPLPENWKP + G +EIYYFN ATGES WDHPCDE+Y +F++E+ Sbjct: 18 VVLEEELPEDYEPTEDEILEYAKWLGMDPDEDKALFWIAREGLKAPLPENWKPCK-TGDDEIYYFNFATGESVWDHPCDEYYRNLFKDEK 106
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A7S1XUY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY8_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.590e-35 Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 13 IILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 I+LEEEIDP+YTP+ +E+ EYA WL +D ++D L WI EGLKAPLP+ WKP + T EIYYFN + G+STWDHPCDE+Y ++EE + Sbjct: 72 IVLEEEIDPNYTPTEEEVLEYARWLRMDLEKDRDLFWIAREGLKAPLPKEWKPCKTRDTEEIYYFNFSNGQSTWDHPCDEYYRSLYEEHK 161
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A7S1GA04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA04_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.650e-35 Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVF 270 D IILEEEIDP Y P+ E EYA+WLG+D + D LL+I EGLKAPLPENWKP + TNEIYYFN A+GESTWDHPCDE+Y + + Sbjct: 45 DSIILEEEIDPSYEPTEDEAIEYAKWLGMDIEEDRDLLFIAREGLKAPLPENWKPCKTTDTNEIYYFNFASGESTWDHPCDEYYRQQY 132
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A8J2SJ42_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ42_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.190e-35 Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 D IILEEEIDP+Y PS EI EYA+WLG+D +D L WI EGLKAPLPE+WKP + T+EIYYFN ++GESTWDHPCDE+Y ++EE+R Sbjct: 16 DSIILEEEIDPNYVPSQDEIDEYAKWLGMDLQQDKDLQWIAREGLKAPLPEHWKPCKTTDTDEIYYFNFSSGESTWDHPCDEYYRTLYEEQR 107
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A2D4BW60_PYTIN (WW domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW60_PYTIN) HSP 1 Score: 134 bits (337), Expect = 3.650e-35 Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 D I+LEEEIDP+Y PS +E+ EYA WLG+D + + L WI EGLKAPLPENWKP + T EIYYFN ATG+STWDHPCDE Y +++E + Sbjct: 7 DSIVLEEEIDPNYEPSEREVLEYASWLGMDLENEQDLFWIAREGLKAPLPENWKPCKTTDTEEIYYFNFATGQSTWDHPCDEFYRNLYDEHK 98
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A482S029_9ARCH (WW domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S029_9ARCH) HSP 1 Score: 124 bits (311), Expect = 3.850e-35 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 1 Query: 4 EDYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPC 246 +D I+LEEEIDP+Y PS QE+ +YA+W+G+D D D L WI EGL APLP NWKP + T++IYYFN ATGESTWDHPC Sbjct: 13 QDSIVLEEEIDPNYVPSEQEVVDYAKWMGMDLDADKDLFWIAREGLMAPLPTNWKPCKTKDTDDIYYFNFATGESTWDHPC 93
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Match: A0A8K1CGE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE3_PYTOL) HSP 1 Score: 135 bits (340), Expect = 6.040e-35 Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 7 DYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPLPENWKPVQDLGTNEIYYFNLATGESTWDHPCDEHYIRVFEEER 282 D I+LEEEIDP+Y PS +E+ EYA WLG+D D + L WI EGLKAPLPENWKP + T EIYYFN ATG+STWDHPCDE Y +++E + Sbjct: 7 DSIVLEEEIDPNYEPSEKEVLEYASWLGMDLDAEQDLFWIAREGLKAPLPENWKPCKTTDTEEIYYFNFATGQSTWDHPCDEFYRNLYDEHK 98 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134851 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16672 ID=mRNA_16672|Name=jgi.p|Trimin1|134851|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=282bp|location=Sequence derived from alignment at Contig_219:121640..122150+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GACGAGGACTATATCATACTTGAGGAAGAAATAGACCCCCACTACACCCCback to top protein sequence of jgi.p|Trimin1|134851 >Trimin1|134851|gw1.219.4.1 ID=Trimin1|134851|gw1.219.4.1|Name=jgi.p|Trimin1|134851|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=94bp DEDYIILEEEIDPHYTPSAQEIAEYAEWLGLDADRDASLLWICIEGLKAPback to top mRNA from alignment at Contig_219:121640..122150+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16672 ID=mRNA_16672|Name=jgi.p|Trimin1|134851|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=511bp|location=Sequence derived from alignment at Contig_219:121640..122150+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_219:121640..122150+ >mRNA_16672 ID=mRNA_16672|Name=jgi.p|Trimin1|134851|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=282bp|location=Sequence derived from alignment at Contig_219:121640..122150+ (Tribonema minus UTEX_B_3156 )back to top |