mRNA_1588 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|346655
Unique Name	mRNA_1588
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A835YTD9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD9_9STRA)

HSP 1 Score: 704 bits (1818), Expect = 8.580e-255
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1

Query:   70 MADSTTVVALIKAAQHEERLCGAVLGATRPRQSQQQHRRRLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQTAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPATRGVAGGAAQDEAD 1119
            MADSTTVVALIKAAQHEERLCGAVLGATRPRQSQQQHRRRLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQTAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPATRGVAGGAAQDEAD
Sbjct:    1 MADSTTVVALIKAAQHEERLCGAVLGATRPRQSQQQHRRRLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQTAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPATRGVAGGAAQDEAD 350

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 7.030e-75
Identity = 167/435 (38.39%), Postives = 211/435 (48.51%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQ------------------LRRRIKRLSLAPRTP--PAAHRTAEA---ALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSS-----------------------------AGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ------------------------------------------------------------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMA---PA---EDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWS 1068
            L+L+ +VE++SPH  PV+WLDVD +E RYLLT  AD  +A+FDLD  G    +   G                    RRR K L    RTP  P +  +      +  GH ++ S VQWYPVD GLF+S  MDGVVK WDTNT  VVL+F+    V++A++ P++                             +GHS  V A AWSP  E+LLA+G+ D  VRLWDIRRSGASACL+ LDQ+Q                                                                                    TAG   RL LWE  +G NT+T+YL TKN+R +PF MA   PA    + VFFP + +GDVL FP++T DGR +  LRGHF+ VQ CAYR  TQE++T GADGLVLLWS
Sbjct:   32 LDLDINVEIKSPHHGPVTWLDVDSAEERYLLTGGADCTVAVFDLDGAGEKRPSLASGDDNNSGPRRHGPAAETVAARRRRPKVLREVGRTPRVPLSQSSGXXXXXSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTVRLWDIRRSGASACLISLDQHQEDXXXXXXXXXXXHTVRCGSGVGGSADGSDDGRGSGVRGSGKRKRGYLKHIKLAPHASRASKFARAHAGPVNSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRRRPFGMAVGRPAGRRSETVFFPNDKSGDVLVFPLHTPDGRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWS 466

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A103YCS6_CYNCS (G-protein beta WD-40 repeat-containing protein n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YCS6_CYNCS)

HSP 1 Score: 150 bits (379), Expect = 8.320e-38
Identity = 107/359 (29.81%), Postives = 160/359 (44.57%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSS-----------------------------AGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQN---------------------------QTAGEYTRLLLWETPSGANT--------LTHYLGTKNRRVKPFRMAPAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCP 1074
            L+L+   E+ SPHR  ++ L VD +EGRYLL+ A+D ++A++D+      TD DGGG + +  K + L  +     H+       GH +A S   WYP+D GLF++   D  V  WDTNT +VV+DF +P  V+  A+   +                             +GH   + AV WS + E++L +G  D  +RLWDIRR+G   C  +LDQ+                           QT+    R    +  SG+ +        L H  G+  +R+ P  ++  +              G   +   G+A   L GH+E V  C Y A  QEL T G D  +L+WS P
Sbjct:   30 LQLSNHKEIVSPHRGAINSLQVDLTEGRYLLSGASDASLAVYDIQRA---TDYDGGGLIAKH-KPILLVDKQ----HQN------GHKFAISTAIWYPIDTGLFVTGSYDHHVNVWDTNTTQVVMDFKMPGKVYRTAMSSLATSHMLIATATEDVQVRLCDMASGAFSHTLSGHRDGIMAVEWSTSSEWVLVTGGCDGAIRLWDIRRAG---CFSVLDQSHSQLGRRPPLLERSTTKVSTSKCSLPGQTSSAKARAPQRKGSSGSGSKHSGSSRILRHAKGSAKQRLHPGLLSSQDRATAH--------YGAAFDVWTGKASMTLHGHYEHVNCCWYGAHDQELYTGGNDRQILIWSPP 363

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A078GR06_BRANA ((rape) hypothetical protein n=12 Tax=Brassicaceae TaxID=3700 RepID=A0A078GR06_BRANA)

HSP 1 Score: 151 bits (381), Expect = 1.320e-37
Identity = 117/435 (26.90%), Postives = 172/435 (39.54%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSS-----------------------------AGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQT----------------------------------------------------------------------------------------------AGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAED--LVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPATRGVAGGAAQDEAD 1119
            L+L+   +  SPHR  V+ L VD +EGRYLL+ A+DG+ A+FD       TD++  G + +     S+        H        GH +A S+  WYP+D GLF++   D ++K WDTNT + V+DF +P  V+  A+   +                             +GH   V +V WS + E++L +G  D  +R WDIRR+G   C  +LDQ+ T                                                                                              AG  +R+ LW+T SG NTL ++   +    K  +MA ++D  L+F P   T    G       GR     RGH+E+V  C + +T QEL TSGAD  +L+WS        GG+ + E D
Sbjct:   30 LQLSNRKDFVSPHRASVNSLQVDLTEGRYLLSGASDGSAAVFDTQRA---TDSEASGLIAKHKCIFSVDK-----GHE------HGHRFAVSSAVWYPIDTGLFVTGSFDHLIKVWDTNTAQAVVDFKMPGKVYRTAMSSLAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG---CFRVLDQSVTQLGVRPPILKHTAVNSKVSAEKSSSGGKNRLKTLQSKHTGSQSMKGSSSVKASVEKSRQKRLHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSAGSDSRIRLWDTQSGCNTLLNFETGRLHTSKAIQMATSDDPALLFVPCMKTVKAFGM----WSGRTTLMFRGHYESVNTCCFNSTDQELYTSGADRQILVWS-------PGGSLEGEMD 436

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: B3S4S1_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S4S1_TRIAD)

HSP 1 Score: 150 bits (378), Expect = 1.620e-37
Identity = 102/360 (28.33%), Postives = 156/360 (43.33%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPP-----------------------------SSAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ---------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAE----DLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSC 1071
            +EL+     +      ++ LD++ +EG+YLLT+ ++G I L+DLD        D    +    + +    R+  A H+ +             +QWYP D G+F+S+GMD ++K WDTN   VV +FN+   ++   + P                             S  GH   V+ V WSPA+EY LA+G+ D R+ +WDIRR  AS  +  LDQ                                   + G    L LW+  +G NTL ++    N   K ++ + +     D VF P EG  ++  + + T  GR    LRGH+  V  C Y    QEL + G D  +L+WSC
Sbjct:   30 MELSKTCSFKRKFSAGINCLDLELAEGKYLLTSGSEGLIVLYDLD--------DATNDVLSEFQPVCAVDRSSAACHKNS----------VETIQWYPHDTGMFLSSGMDSLLKVWDTNNLDVVEEFNIQKPIYNHHMSPIATQHYLVAVGSRREVVVLCDLKSGSMTHSLKGHRSSVYTVQWSPAEEYTLATGSRDNRIFIWDIRR--ASGFVAALDQYNGELHTSASKARSCTSHNGAVSGIRFTEDGRFLISYGTDNELRLWDASNGKNTLVNFGKIYNTSSKGYKFSLSSGGLSDYVFVPSEG--NIATYEIQT--GRQLSTLRGHYNNVSCCCYNPYRQELYSGGNDSNILVWSC 365

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A197KK72_9FUNG (Excision repair cross-complementing rodent repair deficiency, complementation group 8 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KK72_9FUNG)

HSP 1 Score: 149 bits (376), Expect = 2.680e-37
Identity = 116/378 (30.69%), Postives = 166/378 (43.92%), Query Frame = 1

Query:  142 LGATRPR--QSQQQHRRRLELNTD--VELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA----------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQT------------------------------AGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAP--------AEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLW 1065
            LG  RP   QS    +R L+L  D    +Q  H   V+ +D++++EGRYLL+   DG I ++DL+        +   + RR IK ++ A +T           + GH    S V WYP DNG+F S+  D  +K WDTN  +V   F+L   V++ A+   +                             GH G V +V WSP  EYLLASG+TD  VRLWDIR+S  S+CL  LD + T                               G   ++ LW   +G NTLT+Y GT  R    + + P        +   VF+P      ++    +  DG     L G F  + A A+R  TQE+ ++G D  +L W
Sbjct:   23 LGIVRPSALQSHYLSKRLLDLTLDPSTTIQREHVSAVNTIDIEEAEGRYLLSGGGDGNIYIYDLE--------ESQREERRVIKCMAGAEKT-----------ISGHKGGISRVNWYPFDNGMFTSSSFDSTIKVWDTNAMEVACTFDLENKVYSHAISSKATHGLIATASSDPRIRLCDLKTGAFTHSLPGHRGTVLSVEWSPRHEYLLASGSTDTTVRLWDIRKS--SSCLCSLDMHNTNSPPLSEANVAHTRTVNGLAFTPDGLHLVSTGHDDKMRLWNLYTGQNTLTNY-GTMIRNQFVYSLVPVMSPMSAGSPTYVFYPSNDRSILM---YDLMDGSLVKRLTGSFGRITALAWRPRTQEIYSAGNDHDILAW 375

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A024UD24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD24_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.370e-36
Identity = 109/368 (29.62%), Postives = 158/368 (42.93%), Query Frame = 1

Query:  247 LDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAA----LRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA---------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQN--------------------------------QTAGEYTRLL----------------------LWETPSGANTLTHYLGTKNRRVKPFRMAPAED------LVFFPVEGTGDVLGFPVNTHDGRAECA-LRGHFETVQACAYRATTQELITSGADGLVLLWSCP 1074
            +D+D  E +YLL  A  GA+ +FDL     I   +    ++      ++ P   P   RT +AA    L GH    +AVQWYPVDNG+FI+   D  VK WD N   V   F L  +V AA   P  +                           GH   V  +AWS +DE+ LA+GA D  +RLWDIRRSGASACLM+L+Q+                                 +A  +T+ +                      LW   +G +   +Y   + +  +P  +   ++      +V+ PV   G V+   ++  +    C  L  H+  V +C YR TT+ELIT G DGL++LW+ P
Sbjct:   56 MDLDPVENQYLLVGAGTGALRIFDLSIFDTIPLPEDSSSIKPMC---TVKPLKRPRDVRTFDAAQTQNLPGHAAGITAVQWYPVDNGMFITGSQDTTVKLWDANEMDVASAFCLHDVVHAACFSPCGSTLLAVGTDHADVRLCDVAIGASTHRLLGHRAAVRCIAWSLSDEFHLATGAADGSIRLWDIRRSGASACLMVLNQDGLPDIPRHEAAVRVPKRPRHNDPHHCSAENHGTSAQAHTQAIQSLRYTPDGRCLVSSGGDNCMRLWNASTGVHLFHNYGLIQCKGPRPVTIGLVQEGGSDSTMVYHPVGSNGSVVSHLLHGVNHSTPCTKLTAHYSRVTSCIYRPTTRELITGGEDGLIMLWTPP 420

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A067C0V8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C0V8_SAPPC)

HSP 1 Score: 146 bits (368), Expect = 9.810e-36
Identity = 107/371 (28.84%), Postives = 153/371 (41.24%), Query Frame = 1

Query:  247 LDVDQSEGRYLLTAAADGAIALFD---LDSKGVI-TDAD---GGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA-----------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQTA----------------------------------------------------GEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAED------LVFFPVEGTGDVLGFPV-NTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCP 1074
            +D++ +E RYLL     GA+ L+D   LD  GV+ TD         LR ++    L  R              GH    ++V WYPVDNG+F+S  +D  VK WD N  +V   FNL   V  AA  P  A                             GH   + ++AWS  +E+ LASGATD  +R+WDIRRSGA+ACL+ L+ +  A                                                    G    + LW   SG +   HY G K    +   +A A++      +++ PV   G +  + + NT          GH+  V +C YRA+T+EL++ G DGL+ +WS P
Sbjct:   53 MDLEAAEDRYLLVGTGMGALHLYDMAALDVPGVVATDIKPLCSIKPLRGKLPAQQLQDRP-------------GHASGVTSVSWYPVDNGMFVSTSLDACVKVWDANELEVASSFNLTDAVHMAAFSPLPATAHLLAVGTDRPEVRLADISIGAATHRLVGHRASIRSLAWSNTNEFQLASGATDGSIRVWDIRRSGATACLLCLNHDGAADVPRRIEVASSSKKRKMSQDPHIAAAASSALAHTKAVQSLAFTPDGRFLVSSGADRAMRLWNAASGTHMFHHYTGIKCHGARHVTVAMAQEARSDSTMLYHPVGSHGVIASYLLHNTESTEPIAKYTGHYSRVTSCLYRASTRELVSGGEDGLIAVWSPP 410

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: A0A7K8VP52_9STRI (ERCC8 protein (Fragment) n=3 Tax=Strigidae TaxID=30459 RepID=A0A7K8VP52_9STRI)

HSP 1 Score: 144 bits (363), Expect = 1.150e-35
Identity = 101/357 (28.29%), Postives = 152/357 (42.58%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA-----------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ--------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAE----DLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLW 1065
            LELN D +++  H+  ++ LD++  EGRY+L+  +DG I ++DL++           +     K +    R+ P  HR          ++   VQWYP D G+F S+  D  +K WDTN  +    F+    V++  + P +                              GH  EV AV+WSP  EY+LA+ + D RV+LWD+RR  AS CL  LDQ+                                 T G   R+ LW + +G NTL +Y   +N   K  +   +     +  F P   T  +  + V T  G     LRGH+ TV  CAY+   QE+ +   D  +L W
Sbjct:    5 LELNKDRDVERIHKSGINSLDIETVEGRYMLSGGSDGVIVIYDLENLS--------REPHYICKAIHFVGRSHPYVHR----------FSVETVQWYPHDTGMFTSSSFDKTLKIWDTNVLQPADTFSFDGTVYSHHMSPVATKHTLIAVGTKSPKVQLCDLKSGSCCHILQGHKQEVLAVSWSPRHEYVLATASADSRVKLWDVRR--ASGCLSTLDQHNGEKSQASSEAANTAHDGRVNGLCYTSDGLYLLTIGTDHRMRLWNSSTGENTLVNYGKIRNESRKAVKCTVSNGCNPEFAFVPCAST--IAVYAVFT--GELITVLRGHYSTVNCCAYQYNFQEIYSGSKDSNILAW 337

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BLAST of jgi.p|Trimin1|346655 vs. uniprot
Match: UPI001B8891EC (DNA excision repair protein ERCC-8-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8891EC)

HSP 1 Score: 144 bits (362), Expect = 2.760e-35
Identity = 101/356 (28.37%), Postives = 153/356 (42.98%), Query Frame = 1

Query:  190 LELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLRRRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA-----------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ-------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAE----DLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLW 1065
            LEL+   + +  H+ P+  LD+D +EGRYLL+ A +G +A+ DL+        D  G  R   K +    R    AH+          ++ + VQWYP+D GLF ++G D V+K WDTN       +    ++++  L P +                              GH   ++ V WS  DE++LASG+ D RV LWDIR++  S  LM LDQ+                                T G    L LW T +G NT+ +Y   +N   K  ++A ++    D+V  P E   ++L      H G     LRGH+  V +C Y     E+ +   D  +L+W
Sbjct:   30 LELSKYTDCERVHKSPIGTLDIDLAEGRYLLSGATNGTVAIHDLE--------DFSGDFRHIYKHVCGVNRDNRHAHK----------HSVTTVQWYPLDTGLFTTSGTDKVLKIWDTNRLIPADKYRFDTIIYSHHLSPIATKHTLLAVGCEGSTLKLVDLRAGSSTHMLKGHKSSIFCVKWSTKDEFILASGSADNRVMLWDIRKAKGS--LMSLDQHNKQSSSGTKEACTAHNGHVNGMCFTSDGLFLLTFGTDDTLRLWNTSTGKNTMVNYGSIRNDSRKNVQIAISQNGCPDVVIVPNETNIEIL----ELHSGMTINTLRGHYSQVNSCVYHRDRHEVYSGSNDRNILIW 361

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|346655 vs. uniprot

BLAST of jgi.p|Trimin1|346655 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YTD9_9STRA	8.580e-255	100.00	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
D7FSG2_ECTSI	7.030e-75	38.39	WD-repeat protein, putative n=2 Tax=Ectocarpus Tax...	[more]
A0A103YCS6_CYNCS	8.320e-38	29.81	G-protein beta WD-40 repeat-containing protein n=3...	[more]
A0A078GR06_BRANA	1.320e-37	26.90	(rape) hypothetical protein n=12 Tax=Brassicaceae ...	[more]
B3S4S1_TRIAD	1.620e-37	28.33	Uncharacterized protein n=2 Tax=Trichoplax TaxID=1...	[more]
A0A197KK72_9FUNG	2.680e-37	30.69	Excision repair cross-complementing rodent repair ...	[more]
A0A024UD24_9STRA	2.370e-36	29.62	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A067C0V8_SAPPC	9.810e-36	28.84	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
A0A7K8VP52_9STRI	1.150e-35	28.29	ERCC8 protein (Fragment) n=3 Tax=Strigidae TaxID=3...	[more]
UPI001B8891EC	2.760e-35	28.37	DNA excision repair protein ERCC-8-like n=1 Tax=Gi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:492047..502941 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|346655\|estExt_Genemark1.C_Ctg_40049
BRITE	ko00000,ko00001,ko00002,ko03009,ko03400,ko04121
KEGG Module	M00386
KEGG Pathway	ko03008,ko03420,ko04120,map03008,map03420,map04120
KEGG ko	ko:K10570,ko:K14538
GOs	GO:0000109,GO:0000151,GO:0000209,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006283,GO:0006289,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009987,GO:0010165,GO:0010212,GO:0010498,GO:0010604,GO:0016363,GO:0016567,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0030163,GO:0031323,GO:0031325,GO:0031461,GO:0031464,GO:0031974,GO:0031981,GO:0032446,GO:0032991,GO:0033554,GO:0034399,GO:0034641,GO:0036211,GO:0036477,GO:0043025,GO:0043161,GO:0043170,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044877,GO:0045739,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051603,GO:0051716,GO:0051865,GO:0060255,GO:0065007,GO:0070013,GO:0070647,GO:0070912,GO:0071704,GO:0080008,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097458,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234,GO:1990391,GO:2001020,GO:2001022
Preferred name	ERCC8
Description	transcription-coupled nucleotide-excision repair
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG4283@1\|root,KOG4283@2759\|Eukaryota
Evalue	5.62e-76
Seed ortholog	2880.D7FSG2
Hectar predicted targeting category	other localisation
Ec32 ortholog description	WD40 repeat
Ec32 ortholog	Ec-04_000740.1
TranscriptId	346977
Track	FilteredModels1
ProteinId	346655

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346655	gene_1588	Tribonema minus UTEX_B_3156	gene	Contig_4 492047..502941 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346655	Trimin1\|346655\|estExt_Genemark1.C_Ctg_40049	Tribonema minus UTEX_B_3156	polypeptide	Contig_4 492116..502941 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1588_1	exon_1588_1	Tribonema minus UTEX_B_3156	exon	Contig_4 492047..492151 +
exon_1588_2	exon_1588_2	Tribonema minus UTEX_B_3156	exon	Contig_4 492551..492610 +
exon_1588_3	exon_1588_3	Tribonema minus UTEX_B_3156	exon	Contig_4 492861..492880 +
exon_1588_4	exon_1588_4	Tribonema minus UTEX_B_3156	exon	Contig_4 493803..493951 +
exon_1588_5	exon_1588_5	Tribonema minus UTEX_B_3156	exon	Contig_4 494781..494920 +
exon_1588_6	exon_1588_6	Tribonema minus UTEX_B_3156	exon	Contig_4 495669..495725 +
exon_1588_7	exon_1588_7	Tribonema minus UTEX_B_3156	exon	Contig_4 496184..496271 +
exon_1588_8	exon_1588_8	Tribonema minus UTEX_B_3156	exon	Contig_4 498948..499113 +
exon_1588_9	exon_1588_9	Tribonema minus UTEX_B_3156	exon	Contig_4 501533..501712 +
exon_1588_10	exon_1588_10	Tribonema minus UTEX_B_3156	exon	Contig_4 502236..502378 +
exon_1588_11	exon_1588_11	Tribonema minus UTEX_B_3156	exon	Contig_4 502814..502941 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_1588	UTR5_1588	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_4 492047..492115 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1588	CDS_1588	Tribonema minus UTEX_B_3156	CDS	Contig_4 492116..492151 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_4:492047..502941+
coding sequence from alignment at Contig_4:492047..502941+

spliced messenger RNA

>mRNA_1588 ID=mRNA_1588|Name=jgi.p|Trimin1|346655|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1236bp|location=Sequence derived from alignment at Contig_4:492047..502941+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AGTAAGAAGAGTTGGCCTGTGCTGCCCGCGGCGTCGACTTCCAAATAACA
GTACATATGAGCTTTTAGAATGGCAGACTCTACCACTGTTGTGGCGCTCA
TCAAGGCGGCGCAGCACGAGGAGCGCCTCTGCGGCGCAGTGCTGGGCGCA
ACGCGCCCGCGTCAGTCGCAGCAGCAGCACCGGCGGCGCCTCGAGCTGAA
CACGGATGTTGAGCTGCAGTCGCCGCACCGCTGCCCCGTATCGTGGCTGG
ACGTCGATCAGTCAGAGGGGAGGTACCTGCTCACTGCCGCGGCGGACGGC
GCCATTGCGCTCTTCGACCTGGACTCGAAAGGAGTCATCACGGACGCTGA
CGGCGGTGGGCAGCTCAGGCGCAGGATCAAGCGCCTGAGCCTGGCGCCGC
GCACTCCGCCCGCGGCGCACCGCACCGCCGAAGCAGCGCTGCGCGGGCAC
TGCTACGCCGCCAGCGCAGTTCAGTGGTACCCCGTGGACAACGGCCTGTT
CATATCCGCTGGCATGGACGGTGTGGTCAAGGCATGGGACACAAACACAT
TCAAGGTGGTCCTGGACTTCAACCTGCCCGCCATGGTGTTCGCCGCCGCG
CTGCCGCCGTCAAGCGCAGGCCACTCGGGCGAAGTCTGGGCCGTGGCATG
GTCGCCCGCTGATGAGTATTTACTGGCGAGCGGTGCCACAGACTGCCGTG
TGCGGCTGTGGGACATCCGGCGCTCGGGCGCGTCCGCATGTCTGATGATC
CTCGACCAGAACCAGACGGCAGGCGAGTACACGCGGCTCCTGCTGTGGGA
AACGCCCAGCGGCGCCAACACTCTCACCCACTATCTGGGCACCAAGAACC
GGAGGGTCAAGCCCTTCCGCATGGCGCCTGCTGAGGACCTTGTGTTCTTC
CCTGTGGAGGGCACCGGCGACGTTCTGGGGTTTCCTGTCAACACACATGA
CGGCCGAGCAGAATGCGCGCTGCGCGGGCACTTTGAGACGGTCCAGGCGT
GCGCGTACCGAGCCACCACGCAAGAGCTCATCACGTCAGGCGCGGACGGC
CTGGTGCTGCTGTGGTCGTGCCCGGCCACCCGAGGGGTTGCGGGGGGGGC
TGCGCAAGATGAGGCTGATGACTGGAGCAGCGACGACGAGGGCGGTAGCA
ACGGTGCTGCCGACACCGGTGGCGGCGCCTTTGTACCGCCCATACTAATG
CAGGAGCCACCGCGCCGGCGCGGCCGCGCCAGCTAG

protein sequence of jgi.p|Trimin1|346655

>Trimin1|346655|estExt_Genemark1.C_Ctg_40049 ID=Trimin1|346655|estExt_Genemark1.C_Ctg_40049|Name=jgi.p|Trimin1|346655|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=389bp
MADSTTVVALIKAAQHEERLCGAVLGATRPRQSQQQHRRRLELNTDVELQ
SPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKGVITDADGGGQLR
RRIKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMD
GVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSAGHSGEVWAVAWSPADEY
LLASGATDCRVRLWDIRRSGASACLMILDQNQTAGEYTRLLLWETPSGAN
TLTHYLGTKNRRVKPFRMAPAEDLVFFPVEGTGDVLGFPVNTHDGRAECA
LRGHFETVQACAYRATTQELITSGADGLVLLWSCPATRGVAGGAAQDEAD
DWSSDDEGGSNGAADTGGGAFVPPILMQEPPRRRGRAS*

mRNA from alignment at Contig_4:492047..502941+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1588 ID=mRNA_1588|Name=jgi.p|Trimin1|346655|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10895bp|location=Sequence derived from alignment at Contig_4:492047..502941+ (Tribonema minus UTEX_B_3156 )
AGTAAGAAGAGTTGGCCTGTGCTGCCCGCGGCGTCGACTTCCAAATAACA
GTACATATGAGCTTTTAGAATGGCAGACTCTACCACTGTTGTGGCGCTCA
TCAAGGTGTGAGTGGGACATTGAGACCAAAGTCGGAAGCCAAGGGACTTG
CTCTGCTACGTTGCGGAGGACCGCGGTGGGCCCACAGAGCAAGCAGTTGA
AACATCCAAGAAAAACTGCCAACTGGCAGCAACGAACAGCACTTGTGCAC
ATCTCAGCGGCACCAGCTGCCCGGGTGTTGTCGGGGCGGGAAGCACAAAT
TTGGTAAGTCAGGAGTCAGATGGGCGATGCGCAAGTGACCCGGACAGGAC
CAGGTCGCTGGCGGAAGTGCGGCAGCAGCGAGGTGACTAACAGCTTGCAT
CCAGGGCAAGCAGCAGCTTCCAGCCTGAGCTCAGGAATGCAGTGAGGCAG
GCAGCTGCCTGTGTGTGTCGGCATCGACATGATGTTCACGACGATGCGTG
ACAGGCGGCGCAGCACGAGGAGCGCCTCTGCGGCGCAGTGCTGGGCGCAA
CGCGCCCGCGTCAGGTCAGTACGATGCATGCACATGATTTTCTTGCTTGC
AATACAACGTCATGTGGGATTGCGCGCTGCCTCAGTGAATCAGGATGCCT
CAGTAAGCCAGTTGTAGTGCGGTGTTTCAGTAAGCCAGTTGTAGTGCGGT
GTCGAGATTCCGTTGCAAGCTTTGTGCACGCACCAGGCGCCGAGTGGTGC
AGCCTCCCAAGTGCTTTGGGACTGCTGCGGCCGCCCTCTATGCTGCCGCC
ACTGCCGCCGCCAGTCGCAGCAGCAGCACCGGCGGTGTGCATGGACACTG
TCGCATGCGCTGTGTGCGCTTGTGCCTCTGCCTCCATGTGGTGTGCATCG
CACATGCAGGCGTTTGAACTCGCCTCGCCTCTTGTAGTTCATCGCAGCGA
CATGACCGTAGCAAGCACCAGCAGAGCAGGATGACCGCGCGCCATTTGCG
TGCAGTTGCGCGAAACTGTGCAGGAGCGCTCGTTTACCACAGCAGGCACT
CTCAGGCAGCTTCACTCATCACCACGGCCACTGCTGGTCTACCATATTCT
GTTCCACGCCATGCCATCCTGCAGGCAATTGAGATACAGCACAATTGTCA
AGCTTCACGGTCGGCCCATCACTGGTGGTCAGCCGCCTCTGCTGCCCTCA
GTCACCCGCACTTGCACATTTATGTAACCCTAGGCTTCAGGTGCCCCAAA
CTGAGCATCGCCCCTCCAGTTTCCGTTACACTAGGCTACCCTGCATGCTA
CTGATTTAGTACAAAGCTTGGCCAACTGCAGTTGAACTGTCAATGCCACG
GTGTGCAGGAGGCTAGAGTTTGACTTTAGAGCAAAGGTCTGGTCGGCTGC
CCTTCCCACCAAGCTCGAACGTATTGAAGTTGATTTGTTGTAGTTTCGTG
CGCATCCGCTCTTTGGGCGCCTGGAGTCGAACATGAACTTGAGCTGGCCG
CCGCTGTGATGCCCAATGTACAAATCATGCGCAACTGCATTGTAGTCTCA
CCCAAAAGCCTTGCAGACTACAGCCAGGTATTCAAAGTGTTACTAATCCA
CGGACGACACTGCCCCACACGTGCCTGGAGCTGAGACGGAGGTGAAGCTA
CAGCCGCATTGCTGCCCAATGTATGTGTCTGTTTGCATCTCTACCTCTTC
CCCCCTTGCCACCTTGAGGTACATGAATATTGCTTGCGCTTGACACTGTT
CTGCAGGCGCCTCGAGCTGAACACGGATGTTGAGCTGCAGTCGCCGCACC
GCTGCCCCGTATCGTGGCTGGACGTCGATCAGTCAGAGGGGAGGTACCTG
CTCACTGCCGCGGCGGACGGCGCCATTGCGCTCTTCGACCTGGACTCGAA
AGGAGGTACGCGCGATGCTGCTGCCATGCTGGAAGTAAATTGTTGATGAC
AAATAGGGCATTCACATTTAAAGGCATTCTCCAATATCAGATGATGGTGA
TTGCCGTACCTCAAGGGTGTCATGAGTTGAGCACAAAGAGGGGAGCTACC
TCCGTGCCGCTGCTTCGTCGCTGCCGTGGGCAATGTCACGATGCGCTTCA
GTTTGGATATGGAAGGAGTGCAGGCAGCGACGATGCTCAGCTGAAAACCG
CAGTCAGTACGATGCATCTGCCAACCGCCAACAGCCACTAGGTTCACGCT
TCTATACGTTTATACCGCCTGAAATGAACTCCACACAAGTAAGCGCAGAA
CTTGGGGCACGATCGACGAGCGTTTACTGCACGGTATGAAAGGAATGAGT
TGGCGCTGCCAGCTGTTGCTGCTGCATGTTCGGCTGCTGCGCACTGCCTT
CCCACCTTCGAGGCTGCCCAGGGGTGTTTGCGGCAGGCACACAATGCAGT
GCTAAGCCAGCTGACACTCATGGTGACAGTCCGAACCGCCTCTCCTGATT
CGGGTCTTGCGCAGCGCCGGCGGCACAGCGGGGCTTCGCTGCAAGCTGCT
GTCGCGCTACTCGTTTTAGCTTCAAAGGAGGAAACGGCGTCCGCGAACGA
ATCACGCAGACTTGAGCTACATGCAGCAGTCGCATGTTGGAGCTCTGGAA
AGCGCTCCACCGCACCTCCACCACAATATTCGCCTGCCCACACTCAAGAC
CGTCGGCGGAAGTACATGGGGGTACTGCAAGAGACTCACCAACGCATCTC
GCTGTCATCTTCACCGCTTTCTTCTCTGTTACAGTCATCACGGACGCTGA
CGGCGGTGGGCAGCTCAGGCGCAGGATCAAGCGCCTGAGCCTGGCGCCGC
GCACTCCGCCCGCGGCGCACCGCACCGCCGAAGCAGCGCTGCGCGGGCAC
TGCTACGCCGCCAGCGCAGTTCAGGTGATGCATCGCTCACGTGCTTTGGG
CTGAGCAATGAGGGGCGCCGCTCAAGTCATCTCTGGGAGGCTGTATGCGC
TTTGAAACGCGTCCCTTGCGGTATTGCACTGGTGCCTGCGCTTGAATGTG
TGTGTGTTGAGCGTCGCTGCCCTGCCGCAGCAGCGCTCTGCGACACGAGC
GCTGCAGGTGAATCTGTCGCAAAACCGTGCACGCACTGTACTGTACATCA
ACGCATTGCGACGAATGGCGAGAGCAAGACGCCGCAGCCTCTGACGCGCG
TGCTGCGTCACTGTTTACGTACGTACCTACAGCTGCCCGCATCCACCCTC
CTGCCCTCGTGAGGCGAGCATTTCAGTTGAAGTATCGACTCAACGGCTGA
CGTATCTCAACCCAACCCGTATGGCTCACAGTTCTATGAGTGCTGAGATC
TTGACTAAGAGCCCACTGCAGTCTGTCCGCGCTCTGCGAATGACTTGCTG
TCACAATTGTCGTATCACACACGCAGCACACATGACCAAGTATTTGCACA
CGCAGCACACATGACCAAGTATTTGTTATCGCGCGCACAGTCCTTTTCAG
CCACTCTGCTTTGTCTTGCACTCGACAATGACGCGCTGGAGTGTGAGAGC
AGTAATACATGCCCGATTCGTCGACTCGCCACCTATCGGTGTTCTGCTAC
GCGCTCATGTGACTGCAGATTTGTTGGCCTGGCTAAATGAGGCGCTGCTG
CGTGCCATGTGTGTCTGTGCAGTGGTACCCCGTGGACAACGGCCTGTTCA
TATCCGCTGGCATGGACGGTGTGGTCAAGGTACGCTGTACTTCAAGTTTG
CGCCTGCGATTATTTGCCTCAGATGCAGTGCAATTGAGTACCGATATAAA
GAATGTAGTGCATTCAGCCAATTCTACCCAGCATTACGCAGAGAGCAGTC
AGCACACGCCGTCTGAAAGTACATTGCACTTTCATGGCGGCTCACATTGA
GAGTAGCAAGGATCGAATTTTGTAGCAGTGACTGTATTGTATTCAAGGGA
TTATTAGGGACTGGGGGGGGTATACACTGACGGCAATCTAAACCCCTGGT
GACCAGACATTAAAATCAGAAAGCAGGCATTCACCTGGCCGCCCGCAGGT
GTTTCTCGATGCAAAACGTCGTCCGGCACGCACGCTAAATGTCGCAGGCA
GGTCGCGGGGCAGCCGGCGTTTGTACAAACACAGCTGTGCTCAGTCTGCG
CAGCGACATTGCTTTTGCCTCACGTGCCTCCTCCTAGGCATGGGACACAA
ACACATTCAAGGTGGTCCTGGACTTCAACCTGCCCGCCATGGTGTTCGCC
GCCGCGCTGCCGCCGTCAAGCGCAGGTGAGCATGCCTATTGCTGCTGGTG
CAGACACTGGTCATAGTACACCAAAGCTACGCTTCAGTATAGGTGGACGC
TCGCGTTTACCTGTGATAAAGGAATTTGCATTCAATTTATTGCAGCGCTT
ACTCATTAGTTGTGCATGCACACGCACTTGATGTGCATCACATGCGTCCT
AGGTATACCTTTGCATGAAGCACGTTGCACACAGCGGCTCAAAAATGATG
GGTCAGTGACGTTGTGGCAAGCTTCGCAGTGCCACATCGGGCATCGTGTT
TTTTGCTGTCATTTGCGTGTTTCATGGCCCTTCAAGTCATCCATGTAGGT
GGATGTCAAGGTAGATCACATTGTCAAGCACGTGGAGCAATGGCTTCCGC
TCTTTTGTGTTCAATGGTAGCGCTCAGGTCAGTCATGATTGTGCCTGTTG
ACGGCAGATGCGATATAGACGTAAAAAAATGCGATATACGCCTAAAAATC
AAGGGTTTTGCAAATTTGAATTGGTGGCCATTACTGTACTGCAGGTCAAA
TGCTGAAGCACAAAGTGCTTGGATTGTGTTACTACTCTGGCCACTTCTGG
CTTTGACCTTGATAAGACAGGCACCAGAAGTGCAGTGCGCGTCTGATTGA
GATTGTCTTGCTCTTGTTTGTCTGCACTTGCCGCAGCTCAGCACAGCCTG
ATTGCGACGGGCCTGAAGGAGCCGTCTGTCAGGTTGTGCGACCTGCAATC
AGGGGGGTGCACCCACATGTGAGAGGCTGCCAGTACGCCTGCATATGAAA
GTTGTACATAGTGGTACACTTCTATAGTGTTCGGTAAATTGTTTTTAGCG
TTACAAAAGTTCTAGCTTCTGCTTTGAGTTGTGCACTGGCAGCTGCCATT
CCCCTGAAGCAGTGTGGTGTCAACTGCCATCCTCTCCCTTTCCCAATGTG
CTTTTGCATGACACACCCCCCGTGCTGTTATTGACCATGCCGCGTAATCA
GGAAGTATGAATGGCCCATGGCCTTGTTCGGCTCCTGTTGCCGACTGTCG
CAGCCAACAGAAGTAGTAATTTTGAAGCCAGTGGCTTGCTGCCTTCCTCT
ACGCCTGCTGGAGGCCTGCAGGCCACCAGTTGCGGGTATGCCGTGGTGCA
CTGCTGCTTCATGCTACTGATGGAGTATTGAGCGTAGCGGAAACACCCGA
CGCGCTGTTTTCATTGTCACCCGCTGCTTTCAAAAGGGATGCATGCGGTA
CTGCAGGATGCCCAAGTGGCGGGTATCCAGCAGTACCAAGTGTCCTGTAC
TTATTGAGACAAGCTGTACTTTATACACTACCCAGCGCCATGTTGTGAGC
CCGCCGTGTTGTCTCATGCAACTTGTGGTACAGCGCCACGGCATCAGTGT
AGCAATTGCAAGAAGGGGCATGCACCACTGCAGACAAGCAGACTGCGGCA
CAGGGTCAAGTGCTGAAGACCAGATTTCACACGGGCAGGGTTGCCCTTAC
AATGCGGTGTCATTGACCACAAGAAAAACTAAATCACTCCAGGCGTCAAG
GCACCTGTCCACACCTCGACCTTGGAGTGTTGCCAGCAAGAACCAATAAG
CGCAAGCTATGACCACAAACATTTTTCTCAAGCTCTGATGACTGCGTATT
GACAATCAGACAATTTGTTGTACATGTAGCGAATGACAGATTTTGGGTAT
TTTGAGACCCAGATGGTCTGAGATTGCATTGGTATCAAGTTGACTGTGCC
GCAAACAATTTCGCTCGAAGCCCTAACTCCTCCATGACTTTTCCCACTAA
TTTGCAAGCTAAGCGTGGTAAACCATGATTGTGCGAGTGCTTGGCAGTAT
GGATTCGATGAGCAGTAGCAAGACACTGCACGACTATGCATCGCATAGTT
TTAAGATGCGCTAGATAACGTACGGGCTGCTAGTCAAACATAAACACACA
AGGATGCCTGTCTTCTCCGCTTGCCGCCTTTGAGTGTTCCAGTTTTGCAC
TGCTGCGTAGCCTCTCAGGCTGCCAGCCACTGCTGGACTCGGCAAGCGCT
GCTTGCTGCTGCTCAAAGCCAAGCACCGGAAGAGGTCTGGGGGCTGATGA
ATACTTTGTGTGGAGATTGTGTGCTGTAAGCCTGAGGATTGCATGGCTGT
TCACAGGAAATATATGGTGTGGAGATTGTGTGTTGTAGGTGCTGCACAAG
TCTCTATATTGCGTCCTCGCCTCAACCTCACCTAGAAATCGGCAGACCTC
TGCCTCTGCTTCAGGGCAATGACCAGCGTGACCGCTGCTCGCCGCTCTGC
GCAGCCTTCCCGGCCACCCGAGTGAAGTCTGGGCTGTGGCGTGGTCGCCT
GCCAATGAGTACCTGCTGGCATTGTTTGTTGTAAATTTTGTGTATGTCTC
CACCTCGCGTCGTCGCCTCACCCTCGCTTACGATAGTGCAGACCCCGGCC
TCTGCGACGGGGCGATGACATGCGTGACCCGTGCTCACTGCTCTGCGCAG
GCTTCCGGGCCACTCGGGGCGAAGTCTCGGCTGTGGCGTGGTTGCCCGCC
GATGAGTACCTGCTGGCATTGTGTGTTGTGAATGTTGTGCAAGTCTCTGC
ATCACGTTCGTCTCAACCTCACTTACAATAGTGCAGACTTTTGCCTCCCT
CAGGACGATGACCAGCGTGACCACTGCTCACCGCTCTGCGCAGCCTCCCA
GGCCACTCGGGCGAAGTCTGGGCCGTGGCATGGTCGCCCGCTGATGAGTA
TTTACTGGCGAGCGGTGCCACAGACTGCCGTGTGCGGCTGTGGGACATCC
GGCGCTCGGGCGCGTCCGCATGTCTGATGATCCTCGACCAGAACCAGACG
GCAGGCGAGTACACGCGGTCCCGCCCATTTATTGGGAAAAGCACCCTGAA
GTAGCATTTCTGGGGAAAATCTGTTTTCGTCATCATCTTGGGGTTCGTGC
TGCTGTGTCGTTGGCATTGGTGCAGTCAATCAAGCCTCAGGTGTACTGAT
AATACTACCTGTTGCTGATTCTTCATGAAACAGTATTGCTGGATAGTGTG
TGCTGGGCGGTAATGGAAAACAGCTGGATACCCACTGGAGTACCCACAGT
GCAACTAATCGCAATCCACCCTTGTCATACTTACAAGTGATCTACCTGGT
TTCTTCTCTTTTTGCTTTTTTGACCAAAAGCTCTACAACAGTGCTCTTGT
TTTGAACAGCTCGCACTATAGCTGAAGCTGAGCATGCCGCCTGCAGCATG
ATGGTTCGCACAGGAGCATGTTGAACACTCACATTGCAGCGTTGTCTTGT
CTAAATTGAAGGGCACTGGCTGACAAAATGCGTCAGTTTCTTCAACTTCA
GCCCCCAAATTGAGGTCATCTGTTTAAATTAACAACCATCCCACAGTTTT
GGTCAGTGAGATGTGACGTGCACACCTTTCCGCATACATGACCTTACCGT
TCATCAAGTCACTAGTGGTCGCGCGTACATAACTCTTCACTCCATGACAC
TGTGTGACATTGCAAGATGTGTTGCACAAGCAGCAAGCACTTCCAGCACA
TATGACTTCTGTTTGGCCGAGTTACGTCATGTTGCCGATGGCGTCTTTAC
GAGGGGGCAGGATCGTGCTTCAGGCTCGCTTTCATTACTGCTGCGGCTGT
GCGCTGCTGGCAAAGGCGATGGTCCCTCGCCAGAATCATTCACGATGATC
ATGCATTCCGCTGCTGCAGTGGGATGCATGAATGCTGCAGCGGAATGCAT
GAACAACATGAGCCAGTGCTGCAGCTGCCACCACCGTCACCATACCCCAC
CGCTATCTTCGATGCTACCACGCTACAAATTTTAGATTGTTTGCTGCACC
TCCTGGACGGATGCAGAAGCCGATCTTGCGTTTCTTGCCAGCAAAGTACT
GAGCCCTGCCACATGCTGACCCTAGTGCTGTTGCTCTCTTTGCTCCAGGA
CACGAAAATCAGGCGGCAGAGAACACCAATGGTAGTGGAGCGCTGCTGCG
CAACCCCTTTCAGCCGCGCGCTGCACCACTCACTGGTGCTGCCCGTGCGC
ATGGTGGCGCCATCAACTCGCTGGCCTTCACGCCCGACGGGAGGTACCTG
CTCACGGCTGGTGCAGATGACAGGTGGGCCATGTCTGAACTTCATACAGG
TGTTGATTCCAAGCGTTGCGGATTCAGACGTTGGCAGGGTGGCACTGTGC
ACCTGTGCTGCTCTGACAGGTGAGTTGTGTGTGGCGATCCTGTATTTTGC
ATTCAACACAGTGTGCTGGGAGTAACACATGCTGAATGTGAGGTGCTGGT
CCATGCTGACTCAGCTGGCAGCACTCCCTGATGCATTTGTACTGCTTGCA
TAGGTACCACTCATGCGGCTTTGTTAAGGGCCTGCATGCCGGACAAATTC
CAAAATTGTCATTCACGGTTTCGGAGGTTGGCGATTACTGCGCTTATGCA
CTGCTTATTGGACAAATGTGTCACATTGCTCGTGATGGCAGAAAAAAAAC
GATGTTCAATAGAAATTTGCCTATGAGCTGATGCGTTTACAACACTCCAC
ACGGTCTGGCGCCAAGTGTCAAATCGGTTCTGACGAGTAGTATCATCATG
CCGCTCGTGACATACCGTTAATGATACCCCCAAGTCATGAAGGTGTACGT
TGTCAATGCTGAATATTGCCACACTGCATTTTCGATGGTGAAGCCCACGA
GGCGAGGTTTTGTTTTCGAATCTTACTGCGTTCATGAAATGTAGCCACAC
CCTTTTCTGTGCTCGCAATTATGCGCCCCGCGCCTACCCCCCCTTTTTTG
CAGCCACCGTGTCCTCCTTGCATGTCCACTTTTGCGTGTCAATGTACGCA
ACATGGTGCAAACTGCATGTCAGTCAGCAACACCTAGGTTCACCCACTCC
AGCACAATTAGGTGCTGCTTGCTGGTGCTGCTGAACTGGCCTTACAGTGT
GGAAAATGCATAGCAGGCTGCGCCATTTGTCTCATGACATGTCCTGCAAG
CGCCAGAAGCTTACCCAAGCGCGTGTTCCACGGGTCTTGGAGCTACCCTC
AAGGCACGGGTTTTCCGCCGCATTACGAATGCCCGGTAGTGGCAGACGGT
GCAGCATGCTATTCAGACCTCAACAATTGTGCACCCCACCCTTTCTTCAG
GCTCGCAAAAAGGGCTTAACCTTCCTATTTTTGCCTCAACAAAAAATTTC
GCCCCATGGGCCTAAACATTGACAAGGATGCAAGTCTGCAGACCCTGACC
ATTGCCTGAACAGTATTGCTTTTAACCCTTTTGCAGGCTCCTGCTGTGGG
AAACGCCCAGCGGCGCCAACACTCTCACCCACTATCTGGGCACCAAGAAC
CGGAGGGTCAAGCCCTTCCGCATGGCGCCTGCTGAGGACCTTGTGTTCTT
CCCTGTGGAGGGCACCGGCGACGTTCTGGGGTTTCCTGTCAACACACATG
ACGGCCGAGCAGAATGGTACGAGCTCCTGGTGTACAGGCATTGAGCGTTG
TCAACCCTTTTCTTAAAACTGACAACTACTGTGACAGAGCGCAGAGACGC
TCAAGGAGCACTGAATTGAGTAGATACACGAGGGCATTCATGAATTTGCA
GCACTTTCCTTCACGGTGTAGTGTATACACGCTCCATATGATCAATGCAG
CATAACACCGCGCCTCCTGTACCATCGGGCATTAGCGTCTGTTTCTCCAT
GTGCTTGCTCGCAGTTCAGCACCTTGGCATACCAACACCGCCGAAGCACA
ATGACACGACGCTTGCGCTGTCCTGTCACGCACGGCAAAAAACACTCATC
TCCTGTCAGACAGTCTTTTTTGGCAGCAGGATTCACAATAATTCAAATTC
ATGTTGTGCTGTGAGCGTTCTTGCAATCAAGCGTCTTACTCTTTCAGAAG
CAAGTGAAAAAAAAATGCTACAAATCGCTCGGCTGCTCATTCACCGCCAG
CGCTCAGTATCATGCGTCCACACCTCGCAACGCTTGCAGCGCGCTGCGCG
GGCACTTTGAGACGGTCCAGGCGTGCGCGTACCGAGCCACCACGCAAGAG
CTCATCACGTCAGGCGCGGACGGCCTGGTGCTGCTGTGGTCGTGCCCGGC
CACCCGAGGGGTTGCGGGGGGGGCTGCGCAAGGTATGGCAGTGCTGGTGG
TATATATATATACTATGTGTGAAGTGCATCAGGGGCAAGACACTGCCGCG
ATGCAGGCAGTGCTGGTGATTGACATTATGTATGAACTGCATTGTAAAAC
AACTCACTGCTGCAATTGTTTAAAACTGATTGCTGAGGCGCTGGTGACAT
AGAGATTCACAGCGGCAGGGATGTGCAGTGGCGATCAACGCCTTCGAAGA
TGACAGCAGGAGCTGTGGCAAATTTTGATGCCACTCTGCGATGCTTGTGA
ATTTTGTGAATGGGCTGAGACACGACATCATCCTGTGATTTTGTGGTTGG
GCTGACACACGACATCATGATCAGCATTTCTGGTCATGACATACTACCAA
GCTTCAGGGATTCGCATATCACATGCACTAATTCAGGGCGCCTGTGCCCC
ACGTTGCTGGTGCGCAGATGAGGCTGATGACTGGAGCAGCGACGACGAGG
GCGGTAGCAACGGTGCTGCCGACACCGGTGGCGGCGCCTTTGTACCGCCC
ATACTAATGCAGGAGCCACCGCGCCGGCGCGGCCGCGCCAGCTAG

Coding sequence (CDS) from alignment at Contig_4:492047..502941+

>mRNA_1588 ID=mRNA_1588|Name=jgi.p|Trimin1|346655|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1167bp|location=Sequence derived from alignment at Contig_4:492047..502941+ (Tribonema minus UTEX_B_3156 )
ATGGCAGACTCTACCACTGTTGTGGCGCTCATCAAGGCGGCGCAGCACGA
GGAGCGCCTCTGCGGCGCAGTGCTGGGCGCAACGCGCCCGCGTCAGTCGC
AGCAGCAGCACCGGCGGCGCCTCGAGCTGAACACGGATGTTGAGCTGCAG
TCGCCGCACCGCTGCCCCGTATCGTGGCTGGACGTCGATCAGTCAGAGGG
GAGGTACCTGCTCACTGCCGCGGCGGACGGCGCCATTGCGCTCTTCGACC
TGGACTCGAAAGGAGTCATCACGGACGCTGACGGCGGTGGGCAGCTCAGG
CGCAGGATCAAGCGCCTGAGCCTGGCGCCGCGCACTCCGCCCGCGGCGCA
CCGCACCGCCGAAGCAGCGCTGCGCGGGCACTGCTACGCCGCCAGCGCAG
TTCAGTGGTACCCCGTGGACAACGGCCTGTTCATATCCGCTGGCATGGAC
GGTGTGGTCAAGGCATGGGACACAAACACATTCAAGGTGGTCCTGGACTT
CAACCTGCCCGCCATGGTGTTCGCCGCCGCGCTGCCGCCGTCAAGCGCAG
GCCACTCGGGCGAAGTCTGGGCCGTGGCATGGTCGCCCGCTGATGAGTAT
TTACTGGCGAGCGGTGCCACAGACTGCCGTGTGCGGCTGTGGGACATCCG
GCGCTCGGGCGCGTCCGCATGTCTGATGATCCTCGACCAGAACCAGACGG
CAGGCGAGTACACGCGGCTCCTGCTGTGGGAAACGCCCAGCGGCGCCAAC
ACTCTCACCCACTATCTGGGCACCAAGAACCGGAGGGTCAAGCCCTTCCG
CATGGCGCCTGCTGAGGACCTTGTGTTCTTCCCTGTGGAGGGCACCGGCG
ACGTTCTGGGGTTTCCTGTCAACACACATGACGGCCGAGCAGAATGCGCG
CTGCGCGGGCACTTTGAGACGGTCCAGGCGTGCGCGTACCGAGCCACCAC
GCAAGAGCTCATCACGTCAGGCGCGGACGGCCTGGTGCTGCTGTGGTCGT
GCCCGGCCACCCGAGGGGTTGCGGGGGGGGCTGCGCAAGATGAGGCTGAT
GACTGGAGCAGCGACGACGAGGGCGGTAGCAACGGTGCTGCCGACACCGG
TGGCGGCGCCTTTGTACCGCCCATACTAATGCAGGAGCCACCGCGCCGGC
GCGGCCGCGCCAGCTAG