mRNA_1565 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|346646
Unique Name	mRNA_1565
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A836CD32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD32_9STRA)

HSP 1 Score: 1461 bits (3781), Expect = 0.000e+0
Identity = 1166/1166 (100.00%), Postives = 1166/1166 (100.00%), Query Frame = 1

Query:    1 MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA 3498
            MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA
Sbjct:    1 MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA 1166

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BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A4D9DCE5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCE5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.390e-7
Identity = 124/479 (25.89%), Postives = 169/479 (35.28%), Query Frame = 1

Query:  910 RIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGY-------------------------------IICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGM-LWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAK---RIRESTGCCRGW---SFVFLDHEVCCKQNET 2232
            RIEGGGGSGAGFQVYC  +LL++A XXXXXXVEG L       L       +                   +  D  G                                             ++LN             G+W SVGGG GCGT        L  A +G                                I+CG  LD    AG  G+  L   + AL   ++ C  +G  L + GGXXXXXXTAECC P   GYGF F +    +E    T+A             EG   +   E      G G PL  D   +  ++ G W   +    + G                     +    +   D + P++    T    + R  G     DA       Q ++D +   ++ AS  C +G+ DWCC+CT+AK   R  E  G  R +   S  +     CC++ +T
Sbjct:  165 RIEGGGGSGAGFQVYCGRSLLISAGXXXXXXVEGRLL------LGKKGRSYSXXXXXXXXXXXXXXXXXXXEEDDAVGKGEKRGNVREAGEQQKQKK--------------------------ISLNRL-----------GKWTSVGGGGGCGT-ERGGTERLHVAGLGREGSQQGQNPRRAYAPQPDGGSPPSNATGNVGILCGQALD----AGTPGKKELDKGARALAATLQWCLGEGQALRMTGGXXXXXXTAECCEPMQLGYGFSFEVV---LERGRGTRA-------------EGRGANLGGEDGGWRVGEGRPLSADS-LSRVSEAGRWQALRTGKQVQG-------------------LSSRARSETAPDAAPPSEGAFQT--QDIARIKGETAAVDA-------QLRYDPLFRYLHEASQACPRGFQDWCCLCTKAKAALRKDEHRGERREFDERSTAWFTRVTCCRKEDT 550

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BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A835ZEC8_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC8_9STRA)

HSP 1 Score: 2833 bits (7344), Expect = 0.000e+0
Identity = 1639/1639 (100.00%), Postives = 1639/1639 (100.00%), Query Frame = 1

Query:    1 MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN 4917
            MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN
Sbjct:    1 MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN 1639

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BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A835ZH68_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH68_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.990e-54
Identity = 173/453 (38.19%), Postives = 239/453 (52.76%), Query Frame = 1

Query: 2899 LTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAH--ALDSAAVAYRAVVKGKTVDLIEIK--RSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDA---GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDN-NTNLTVPGGGRGRAGAGGTWAG-GSLGLGEYRKQQ--------LTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSA--AVAYRAVVKGKTVDLIEIK--RSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDA---GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLP 4185
            LT+R+++LV     ++ +G  C  FNG +YLGGG++  G YV+SV H  A D A   YRA+V+G TV L +IK  R  + D VVFRC++ LP L AP+P + G  G  A++  RR DA H   L+RG I S +       +TD  DA   GAP+ TP G  +GL+  RS  DN   A+V    +   L+   S P LP        F R     + +  P           T AG   + + +Y            LT+R+++LV     ++ +G+    F+G +YLGGGQK    V+SV H L +A  AV YRAVV+G TV L +IK  R    D V+FRC+E LP L AP+P + G  GR A++  RR DA +   L+ G ITS +    T+ +TD  DA   GAP+ TP G  +GL+  RS  D    A+V    +   L+   S P LP
Sbjct:  516 LTQRMQNLVILIQAIDSNGGTCKTFNGVLYLGGGQQK-GCYVISVVHMPAADDA-TTYRALVQGTTVRLTQIKTGRKVNGDVVVFRCEEALPELPAPMPVAMGYAGRRAYVFARRDDATHV--LLRGKIASWELREGTISLTDHVDACYAGAPVVTPQGILVGLLDSRSG-DNQPTAYVSIGIIDVILYA--SPPHLPA-------FPRLQGLESQVGAP-----------TTAGIKPIVVQDYASPTYEADLPHLLTQRMQNLVILIQAIDSEGDTFKTFDGVLYLGGGQKKGSYVISVMH-LPAAGEAVTYRAVVQGTTVRLTQIKTGRKVNMDVVVFRCEEALPELPAPMPVAMGYAGRSAYVFARRDDATYV--LLRGKITSWELREGTISLTDHVDACYAGAPVVTPQGILVGLLDSRSA-DKQPTAYVSIGIIDVILYA--SPPHLP 937

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BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A836CCZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.830e-36
Identity = 97/214 (45.33%), Postives = 129/214 (60.28%), Query Frame = 1

Query: 2869 VILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHAL-DSAAVAYRAVVKGKTVDLIEIKRSPH--VDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITS-LKSHGTAAMVTDARDA-GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQL---PMLKDE 3486
            V  E+ R+Q +TER+K LVTP    N   +PCA+ NG +YLGGG K +GN+VLSVAH    +  + Y+AVV+GK VDL+E+KR     VDAVVFRCQQ +PAL AP+P+  G +G   +++  +GDA  E  L  G I S  +  GT A+  +     GAP+ T  G  +GLMLG +   N +A F  A  +  FL M  S PQL   PM  +E
Sbjct:   11 VYSEQARRQFITERVKTLVTPIVAFNSSNDPCARSNGILYLGGGEK-EGNHVLSVAHLFYPNQMMTYQAVVQGKPVDLVEVKRGTFMDVDAVVFRCQQGVPALPAPMPFDAGLIGCLVYVVAYQGDATPE--LTEGKIISWARRQGTVALDDEGPCCPGAPLLTQEGALLGLMLGSTV--NKEATFASAPVIDTFLLM--SPPQLQGLPMRPEE 217

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|346646 vs. uniprot
BLAST of jgi.p|Trimin1|346646 vs. uniprot

BLAST of jgi.p|Trimin1|346646 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CD32_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4D9DCE5_9STRA	5.390e-7	25.89	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

BLAST of jgi.p|Trimin1|346646 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835ZEC8_9STRA	0.000e+0	100.00	C3H1-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A835ZH68_9STRA	8.990e-54	38.19	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCZ8_9STRA	8.830e-36	45.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:279731..287887 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|346646\|estExt_Genemark1.C_Ctg_40032
Hectar predicted targeting category	other localisation
TranscriptId	346968
Track	FilteredModels1
ProteinId	346646

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346646	gene_1565	Tribonema minus UTEX_B_3156	gene	Contig_4 279731..287887 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346646	Trimin1\|346646\|estExt_Genemark1.C_Ctg_40032	Tribonema minus UTEX_B_3156	polypeptide	Contig_4 280259..287887 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1565_8	exon_1565_8	Tribonema minus UTEX_B_3156	exon	Contig_4 279731..281611 -
exon_1565_7	exon_1565_7	Tribonema minus UTEX_B_3156	exon	Contig_4 282161..282321 -
exon_1565_6	exon_1565_6	Tribonema minus UTEX_B_3156	exon	Contig_4 283554..283785 -
exon_1565_5	exon_1565_5	Tribonema minus UTEX_B_3156	exon	Contig_4 284290..284538 -
exon_1565_4	exon_1565_4	Tribonema minus UTEX_B_3156	exon	Contig_4 284865..285422 -
exon_1565_3	exon_1565_3	Tribonema minus UTEX_B_3156	exon	Contig_4 286122..286961 -
exon_1565_2	exon_1565_2	Tribonema minus UTEX_B_3156	exon	Contig_4 287385..287464 -
exon_1565_1	exon_1565_1	Tribonema minus UTEX_B_3156	exon	Contig_4 287860..287887 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_1565	UTR3_1565	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_4 279731..280258 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1565	CDS_1565	Tribonema minus UTEX_B_3156	CDS	Contig_4 287860..287887 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_4:279731..287887-
coding sequence from alignment at Contig_4:279731..287887-

spliced messenger RNA

>mRNA_1565 ID=mRNA_1565|Name=jgi.p|Trimin1|346646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4029bp|location=Sequence derived from alignment at Contig_4:279731..287887- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCCACAGTGCTCCATCCGCCGCGCCGGCGGCTTCTTCGATGATGC
ATCGCTCGCGTTCCTGGACTGTTCCGCGCGCCACTTCGCCGCCACTGTGT
CGCATTGGGCGGGCTGGGAGGAGTCGCGCGCGCAGTGCTCTATGGCCGGC
CTCGCGGTCTGCGACGCGCTCGTCCTCACGCAGGCGCAGCTCGGCGGCAA
GGGCCTCGCAGAGTACCTCACAGCGCTCATCGCCGTGCCGAGCGCTGCCC
CACGCCTCGTCGCGCAGACACACCGCTTCGGCTGGTCGCCGGCGCGCGCG
TTCCGCACCGCACAGGAGCGCAACCCGCTGTTCTACGCCGGCGCCGCCGC
CGCCGCCGCTGCTGCCGCGGAACAGGAAGCCGCCGCCGCTGCTGCTGCCG
CGGAACAGCAAGCCGCCGCTGCCCCTGCCGCTGCTGCCGCGGAACAGGAA
GCCGCGGCGGCAGCGGCGGCAGGTGAGCACGGTGGCTCTGTTGGCGGACC
TGCGGCTGAGGCGCCGCGGCACGGCAGCGACAGCGGCAGCGGATTGGATG
GCGCAGATGAAGACGTCGACGGCGCTGCTGCTGCGGCGGCTGCTGCCGCA
ATCCCCGTTACCGATGCAGCGGCGACGACGGACGCGTCGCCCCTCAATGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGGTGCGCCAGCGC
TCAGTGAGCATCAAGTCATCAGCGGCGCCGCTGCGCCTGCCGCGGTCAGC
CTGCAGGAGCTCACCGATGAGCACGACACAGCAGCGCCAAGCGCTGCCCC
CACGTCCGCATCAGTCATACCTACCCTCATCAGCAGCAGCGTTGCAGCAG
CAGGCGAGACGGCTGCGCCAGAACGCGGTGATGACGTGCCGGAGATACCG
GGTCCGCCGCGGATAGAGGGCGGCGGCGGCAGCGGCGCTGGATTCCAGGT
CTACTGCAACGCGACGCTGCTGGTGACAGCGGGCGGCGGCGGCGGCGGCG
GCGTCGAGGGCAACCTGGCCAACGTCACCGACAGCTCGCTGGGCGGCGGC
GGCGGCGGCGGCGCGCAGGTCAACAGGAAGGTGCTCCTGCACTGGCTCGC
GCACTACGGCGGCGTCAACGTTGATGCGGCCGATGGCAGTGGCACTGGCA
CCGGCGGCGGCGACGCTGGCAGTGCTGGCAGCAGCAGCAGCGGCGGTGGC
AGCAGCGGCGGCAGCAGCGACGGCGCTGGCAGCGGCGGCGGTAGCGGCAG
CGGAGACCCCGATGCGGCGGCGCTGTGGCTGGCGCTCAACGCCACAACCA
TGGTGGCGGGCGGGGCGGAGGAGGCGGGGGGGCGGTGGGTGTCGGTGGGC
GGCGGCAGCGGGTGCGGCACGTGCAGCACGATGGACGCGACGTGCCTGTT
GGCGGCGCGCGTGGGCTACATCATCTGCGGCACGAAGTTGGACGATGATT
TTGACGCGGGGGAGGGGGGCGAGGCGCGCCTGGCCACGCTGTCGACGGCG
CTGCAGACGGTTATGCGCAGCTGCCACAGCGACGGCATGCTCTGGGTCGA
GGGGGGCGGCGGCGGCGGCGGCGGCACCGCAGAGTGCTGCACCCCCTTCA
TGGGCGGTTACGGCTTCGGTTTCACGCTGGGCAGCCGGGGCGTGGAGTTT
GCGAATGCCACACAGGCGGGGCAGACGTACGTAGATTTTACGACGGACTC
TGGTGCGGAGGGCGGTGCTGGAGACAGCAGCAGCGAGTCGTATATACTGG
AGCGGGGCTCCGGCAATCCGCTGCACGTGGACCCAGACGCCAACAACACC
GCAAAAACAGGAGACTGGGGGGGGACGCAATACGCGCCCGGAATGGGGGG
TGGGGAGGGGGCAGGGGCAGGGGGTGGGGAGGGCGGGGGGTGGGGGGGGG
GCTGGCATGCATATGCGGACAAGTACATGCAGGGGGAGCAGGATGGCTCC
CAGCCTGCGCAGAATGACACCCTGACGGGGCCTGATGCCGTTGACCGCAA
CAACGGCACGGAGGGGGAGGGCGACGCCGGCGCGGGCGCGCGCGCGGTGC
AGTTCAAGTGGGACAAGGTCGGCTACCTCATGTACAACGCGTCGCTCACG
TGCGAGCAGGGGTGGGGCGACTGGTGCTGCGTCTGCACGGAGGCCAAGCG
CATCCGCGAATCCACCGGCTGCTGCCGCGGCTGGTCCTTCGTCTTCCTCG
ACCACGAGGTCTGCTGCAAGCAGAACGAGACCGAAGCCGACGCCACTGCG
CCCAATGACCGCCTCGACGCCGAGAGCGACACTCACGCGTGGCGCGTCTG
GGACGACCTCGGCATCTGGAACTACGATTTCAACGACGCGTTCCTGTGGA
ACGCGCGCTTCGGCGGCGGCGGCGGCAGCGGCGGCAGCGGCGCTAGTGGC
GGCGGCAGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGCTGCGCAATGGAA
TGCATCGGCGGCAGCGCTGAGTGCTGCGGCGGGCAACAGCAGCAGCAGCA
GTGACGGCGGCAGCATCGGCGGCGAAAGTTTCGGCAACATTGGCGACGAC
CGCGGCGAAAGTTTCGGCAACATTGGCGACGACCGCGGCAGCATTGGGAA
CGGCGTTACCGTCGTCGGCGCAGCGCACGGCGACTTTCGCCGCCGCACCG
CCGACAGCACTGTCGCCATTGGCGGCGTCAGCGGCGGCGGCGGCAGCGAC
GGCGGTGGCGGTGGAGGCACTGACGGAGGCTTTGGTGGAGGCAGCGCAAG
CGGTGGTGGTGGTGGCGGTGGTGGCAGTGGGGGCGGCGGCGGTGGCGGAG
GAGGCGGAGGCGGCGGCAGCCATGACCACTGTTCAGGCTGGTACGCGGCG
GTGGCGTCCACGCCTGGCATCAGCAGCCAGACGACAGACGTCACGCTGTG
GGGCCTGCGCGCGGCCGGCGGCGGCTACGGCGGCAGGGGCTTTGGTGGCG
GCGGCGGCGGCGGCGGCGGATTCGTGCCCGATTGGAGCGGCGCGATACCC
GACATTGGCGCAATGGCGCACGAGAATCCGGACGTCACCGACGCAGAGGG
TACGCCCGCGGCGCCCACAGAATCTGCTGCCGAAGCAGCAGAGCTGAGCG
CTGTGCACCACCGGCAGCGCGGCTCCGCCAATGACGGTGCTGCCGCTGCC
GCCGCCGCGGCGCCCTGGGACCTCCGCGACGCCAGCTCGTCCACGCTGCT
GAGCACTGCGGCACTGGCTCTCTCCCTGTGCCTCGTGGTCGCGGCCGCTG
CCTCTTTTGTAGCGCGAGGCAGCGCGGAACGACATCGGGCGGCGGCAAGG
TCGCGGCCGGCCGCAGGGGGGTCGCTGTTGCGCGGCGGCGGCGGCGGCGG
CGGCGGCTCGGCAGTGGAGATGCGAGCGGCAGCTTGCGGCCATAGCGGCA
GTACTAGCGGCAGCAGCAGCAGCAGCAGCGGCGGGCTCTATGGAGCCATT
GGAGGCAGCGGCAGCGCCAGCGGCGCCAACGGCGGTGCCAACATCGCGTA
GCTTCTGCTGAATCGCACGCGTTCATGCGGGGCTACGCTGATTCCTGCGG
GCGCGATTCAAGTTTACTGGGGGGGCGGGGCGCGATGCTCAGCAAAATGG
CTGAGCAATCATGACGCCCTCAGCTGCATGTTTGTTTTTTAAAGCACTTC
AGTGACCCGACAATTTTCCGGTGCGCACTGCAGGCTGGCCCTGTTGCGGT
TGCGCGCGTGCATACACGTAGTGCCCATTGTAAGTGCCGCGGCAGCGGAG
GGCATAGAGAGCAGTCTTCTAAGAAAGAGCGCGTGCCAAATCTGTTCCCC
ATTCAGCACAAATCACACCCGCCCTAGAGCGCTCTTTGGTACCTACACCG
AATGGCAGCACTCGTGTGGACACTACCTGAATAGGTACTGAACTCATCAC
ATTCGGTTCGCCTGAGAGTGAGGCGCATACATACCAGCTGCTCATTTCTG
CAGCGCGCGTTGTCCTGGCCTGTGTTCTGGCTCGCAAGGCATTGCACTGC
TGCATTTCACGAATGCAATGGCTTTTGCC

protein sequence of jgi.p|Trimin1|346646

>Trimin1|346646|estExt_Genemark1.C_Ctg_40032 ID=Trimin1|346646|estExt_Genemark1.C_Ctg_40032|Name=jgi.p|Trimin1|346646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1167bp
MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAG
LAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARA
FRTAQERNPLFYAGAAAAAAAAAEQEAAAAAAAAEQQAAAAPAAAAAEQE
AAAAAAAGEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAAAAAAAAA
IPVTDAAATTDASPLNAAAAAAAAAAAAAGAPALSEHQVISGAAAPAAVS
LQELTDEHDTAAPSAAPTSASVIPTLISSSVAAAGETAAPERGDDVPEIP
GPPRIEGGGGSGAGFQVYCNATLLVTAGGGGGGGVEGNLANVTDSSLGGG
GGGGAQVNRKVLLHWLAHYGGVNVDAADGSGTGTGGGDAGSAGSSSSGGG
SSGGSSDGAGSGGGSGSGDPDAAALWLALNATTMVAGGAEEAGGRWVSVG
GGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTA
LQTVMRSCHSDGMLWVEGGGGGGGGTAECCTPFMGGYGFGFTLGSRGVEF
ANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNT
AKTGDWGGTQYAPGMGGGEGAGAGGGEGGGWGGGWHAYADKYMQGEQDGS
QPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLT
CEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATA
PNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGGGGSGGSGASG
GGSGGGGGSSGGAAQWNASAAALSAAAGNSSSSSDGGSIGGESFGNIGDD
RGESFGNIGDDRGSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGGGGSD
GGGGGGTDGGFGGGSASGGGGGGGGSGGGGGGGGGGGGGSHDHCSGWYAA
VASTPGISSQTTDVTLWGLRAAGGGYGGRGFGGGGGGGGGFVPDWSGAIP
DIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDGAAAA
AAAAPWDLRDASSSTLLSTAALALSLCLVVAAAASFVARGSAERHRAAAR
SRPAAGGSLLRGGGGGGGGSAVEMRAAACGHSGSTSGSSSSSSGGLYGAI
GGSGSASGANGGANIA*

mRNA from alignment at Contig_4:279731..287887-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1565 ID=mRNA_1565|Name=jgi.p|Trimin1|346646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8157bp|location=Sequence derived from alignment at Contig_4:279731..287887- (Tribonema minus UTEX_B_3156 )
ATGGAGCCACAGTGCTCCATCCGCCGCGGTGACGCGACGTGTGCGCTCCT
GTGACACTCCTCTCTTCCTGATGCATGATGCAAACCAGCAGCCATGTACA
AGTCCATGCGCCCGTGCGCACTGCAGCAGCCCCTCATGAAAAGCCCTTCA
TGTGCCGCATTACGCTGCTTCATCAGTTTCACTTCATGAGTTTCAGCGTC
ATGTGCACCCTACTGTCATGTGAAGCCCTCGCATGTGCCGCATTCCGCTG
CTTCATCAGTTCCTCAACCTTGACCTAACCTGCACCCTACTGTCATGGAA
GCCCTTACATGTGCCGCATCATGCTGCTGCATCATTTTCAACATGACCTG
CACCCTACTGTCATGTGAAGCCTTCTCATGTGTCGCACTATGCTGCATTA
CGCATGACCCTACTGCTGTACAGCCGGCGGCTTCTTCGATGATGCATCGC
TCGCGTTCCTGGACTGTTCCGCGCGCCACTTCGCCGCCACTGTGTCGCAT
TGGGTCGACTCTGTACTTGGCGAGCGGCTCCCCGTGACAAACTTCCACTT
CAACCACGAAGCGCCAACGTTTGGCGAGCTGAATGCAATACAGGCAAGGC
GGTGGTTGGGGGTGGTTTGTTGTGAATCGCCTCACCGCCTGGAGCTGCGC
GCTCTGAATGTATGGATGTGATCAAAAGTGTACGTACTTGTGTGCGCAGA
ATTGCATGCTTTGATAGGTGCATGCTCCTTTCCTCAAAACACGCCATGCC
TACATGATGCACAGCAACGAATAACCACACTTGCAGTCACCTGGCGCGCT
CTTCCCCCGCCCCCCCCCCCTCCCCCCTCCCCCGTATAGCCCGACACACT
CGGAATAAAGTTTTCATGACACTCATTCGCCCTGCACCTCTGGCCCCCCC
CCTCCCCCTTCAAAACCCGCGCGCAGGCGGGCTGGGAGGAGTCGCGCGCG
CAGTGCTCTATGGCCGGCCTCGCGGTCTGCGACGCGCTCGTCCTCACGCA
GGCGCAGCTCGGCGGCAAGGGCCTCGCAGAGTACCTCACAGCGCTCATCG
CCGTGCCGAGCGCTGCCCCACGCCTCGTCGCGCAGACACACCGCTTCGGC
TGGTCGCCGGCGCGCGCGTTCCGCACCGCACAGGAGCGCAACCCGCTGTT
CTACGCCGGCGCCGCCGCCGCCGCCGCTGCTGCCGCGGAACAGGAAGCCG
CCGCCGCTGCTGCTGCCGCGGAACAGCAAGCCGCCGCTGCCCCTGCCGCT
GCTGCCGCGGAACAGGAAGCCGCGGCGGCAGCGGCGGCAGGTGAGCACGG
TGGCTCTGTTGGCGGACCTGCGGCTGAGGCGCCGCGGCACGGCAGCGACA
GCGGCAGCGGATTGGATGGCGCAGATGAAGACGTCGACGGCGCTGCTGCT
GCGGCGGCTGCTGCCGCAATCCCCGTTACCGATGCAGCGGCGACGACGGA
CGCGTCGCCCCTCAATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGG
CGGCGGGTGCGCCAGCGCTCAGTGAGCATCAAGTCATCAGCGGCGCCGCT
GCGCCTGCCGCGGTCAGCCTGCAGGAGCTCACCGATGAGCACGACACAGC
AGCGCCAAGCGCTGCCCCCACGTCCGCATCAGTCATACCTACCCTCATCA
GCAGCAGCGTTGCAGCAGCAGGCGAGACGGCTGCGCCAGAACGCGGTGAT
GACGTGCCGGAGATACCGGGTCCGCCGCGGATAGAGGGCGGCGGCGGCAG
CGGCGCTGGATTCCAGGTACGGAGCATTCCACAGTGCTGCTGCATGCACC
TCGAAAGCAGAGTGTACATACTTCCACTCGGCGCGCGCACCTTGCTGTCC
GCCACATACCGTGCCCCCGTGTGCAGAAGTCCATGCTGCTGCAGACGAGA
AGTATCGAGTTTTGTTGAATACAGTTCATGACGGAGCGGTCGTCGCGGTG
CGCAGCACCGCAGTTGAAGCAGCGCTCGCGCATGCGCGCCGGGGGAGCTG
GTACGGCGTTGGCAGCTGCGCTCGCCTGGCCGTGAGCGCCAGCATCAACT
GCAACTTCAACTTCACACCAGCAGCCTTTGCTCTCGGCAATCTGCTCATG
CACTGCAAGTTAGACGTCACAGACCCCTGGCATGCGGACGCTTTCACGGG
GTCATTAATTGCATACAACACCCGCGACTTGCGCCGTGTCCCAGCCACCC
ATGCGCGCGCAGGCGCTACTCCAGAAGCGAGGTGATCGTACATACATACA
CGCGCCTGCCCCTCACTCTGGGCACAGATTTTGCAAAATATGAAATGGTC
GCTGCTGTGGCAGCTGCTCAACACTTGAATTACAATGGTGTGACTCCGCA
CGGGGGGGGGGGGGGAGGGGGGCATTGTAAGGTGCATGCCTATATTACTT
GCCCCCCCCCCCCCACTCTGTCAACAACGTCCATTTGACCGCTTGAACGC
CCCGCGCTGCCTCAGGTCTACTGCAACGCGACGCTGCTGGTGACAGCGGG
CGGCGGCGGCGGCGGCGGCGTCGAGGGCAACCTGGCCAACGTCACCGACA
GCTCGCTGGGCGGCGGCGGCGGCGGCGGCGCGCAGGTCAACAGGAAGGTG
CTCCTGCACTGGCTCGCGCACTACGGCGGCGTCAACGTTGATGCGGCCGA
TGGCAGTGGCACTGGCACCGGCGGCGGCGACGCTGGCAGTGCTGGCAGCA
GCAGCAGCGGCGGTGGCAGCAGCGGCGGCAGCAGCGACGGCGCTGGCAGC
GGCGGCGGTAGCGGCAGCGGAGACCCCGATGCGGCGGCGCTGTGGCTGGC
GCTCAACGCCACAACCATGGTGGCGGGCGGGGCGGAGGAGGCGGGGGGGC
GGTGGGTGTCGGTGGGCGGCGGCAGCGGGTGCGGCACGTGCAGCACGATG
GACGCGACGTGCCTGTTGGCGGCGCGCGTGGGCTACATCATCTGCGGCAC
GAAGTTGGACGATGATTTTGACGCGGGGGAGGGGGGCGAGGCGCGCCTGG
CCACGCTGTCGACGGCGCTGCAGGTGTGTGTGCGCGTGCGCGCGCGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGCGTTCACAAAGAGGA
ATAAGCAATGATTTATGGCGGTAGTGCTGGCAGCGCAGCGCAATGCAGGT
CCAAGTTTGCATGCGAGCAGCAGCACCGCCGCCAGCAGCGGCGGCAGCAG
TGGCAGGACCGCCTCAACCATGTGTGTGCGTGCGTGCGAGCGATATGGTT
TCGGCGCGCGGTGCTCCTTGAAAGCTGTGAGCGATCAGTGCATGCCTGCT
TAGCCCCCCACTGCCCCCTACCCCCCCCCCTGCCGTCCACACTTTGCAGA
CGGTTATGCGCAGCTGCCACAGCGACGGCATGCTCTGGGTCGAGGGGGGC
GGCGGCGGCGGCGGCGGCACCGCAGAGTGCTGCACCCCCTTCATGGGCGG
TTACGGCTTCGGTTTCACGCTGGGCAGCCGGGGCGTGGAGTTTGCGAATG
CCACACAGGCGGGGCAGACGTACGTAGATTTTACGACGGACTCTGGTGCG
GAGGGCGGTGCTGGAGACAGCAGCAGCGAGTCGTATATACTGGAGCGGGT
GAGACGCGCAGTGGCACGTCAACTTCAATGAACTGCATCAACTTCAGCAG
ATTGTTTGTGAACAAAACTTCTCGATTGATTGCAGCACTGCTGAAAAGGA
TGATGACGCTCAGCTCTGAATGAATGGGCAATAACGCCGCCGCACCTTGT
AATCTATCCGAACGGTCGTAATGTACGCTTATAGCTCTGTTCGACTACCT
GAAGTACCAGTTTTGAGTTATCCTGTGCTGATGCAATAGCACAGCACATT
GCGCACTGGACGTGTACCTCAGCATACAGCCTGCAGCTTTAAAGCATCAT
CCACTGCAACTTTGCCATGCAATGATCTGTTGCTCGCTGCCTCCACCGAT
CACTTCCATGTTGAGCACTGCTGGGGCGTTTCTGCACCGTATACATACAT
GCATACATACATACATACATACATGCGTACATGAGTACATACCTGCATAC
GCTCACCTGAGCATCATCCCGATCACGCCACGCCGCGCATGCGACGGCGC
AGGGCTCCGGCAATCCGCTGCACGTGGACCCAGACGCCAACAACACCGCA
AAAACAGGAGACTGGGGGGGGACGCAATACGCGCCCGGAATGGGGGGTGG
GGAGGGGGCAGGGGCAGGGGGTGGGGAGGGCGGGGGGTGGGGGGGGGGCT
GGCATGCATATGCGGACAAGTACATGCAGGGGGAGCAGGATGGCTCCCAG
CCTGCGCAGAATGACACCCTGACGGGGCCTGATGGTGAGTTGCGGCGCAT
GTAACTGCCGTCAGTTCGTGTCTTGCTCTGCAGTTATAGGCACTAAGGTG
TGTGTAGGTAGTTGCCTATTGCCATAGGCACTAAGGTGTGTGATATTCGA
CAGCAATAGCGCATGTGATTGGGGGCCGCTGAGCAATGCGTGTGACGCAC
GGTGCATGCAAGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCAC
AGGGGACATGTACCCAATTGCAAGTGTATGCACTTTGGGAGGGTAGGAGA
GTCACTGTGCTGCACAGGAATAACAGTCCCACCAAGCAGAACCTGTAGCT
GCTGCGTGCAGAGCATTCTATCAAGGCAAAGCCAGCACACAGCCGACAGG
GCCTTTGTATGCGAACACACCGGCGTTACTACTCAGCTGCCGACCACAAG
AACGGCACAAAACAGAATGGGTGCTGCACTACAGCATCATTCCTGCTGTT
GACGTTGACAAGTTGTAGTTGAAGTTGAAGTGGGGCATAATCGTGACGTG
CCCTCATTTCGAGCGCAGCGTTCGCTGTCACAAGCTGCATGCAGGGCGGG
CATCCAGTGAACACGGCTGCTTTTTGTCAGTCTTGAATCACAACACAAAC
ATGTTTGCAAATACCTGGTTGCCCTCGGTTCCCTTCTAGTCCTACCCTAT
GGGTCGCACGCAATCATAACTCACAGCTATACACCCCCTTTGATGTGGGA
TATCGTGTGCACGCACAACACAAGCACGTGAGCAAATCCCATCCGCGTCG
TCAAGGAAGTGACATTCCAAACTTCAACGATTCCTCAACATGCTCAGCGC
AGCTGCCTCTCGCAGCTACACGTGCAGCCTTCAGTTCACTTCTCACTGCC
CTATTCTCCTTATTCCTGTATGCTTCGTCACCTGCAGTCATTGCACTGCG
AGGTTAGCAGTGGCTACAGGCCGCGACATTGATAATCTGCTACGGAAAAA
ATTATTCTACTAATATACCCAATACCTTGCATCTATCTGTGGTGTCTCAA
CCGTTGCCGCCTGCGCAGCCGTCAACCGCAGCAATGCCACAGAGGGAGAG
GGCAATGCCTGCGCCGGCGCGCGCGCGGAGCATCCTAAGTGGGGCAAGCT
TGATGATCTGTCATGATACAGTTCAAGTGGGACAAGCTTGATGATCCGTC
ATGATAAATTAGCTGAATACCCAATACCTCATGTCTGTCACGCCGCAATT
GTCGCCGTTTGCGCAGCCGTTGACCGCAACAACGGCACGGAGGGGGAGGG
CGACGCCGGCGCGGGCGCGCGCGCGGTGCAGTTCAAGTGGGACAAGGTCG
GCTACCTCATGTACAACGCGTCGCTCACGTGCGAGCAGGGGTGGGGCGAC
TGGTGCTGCGTCTGCACGGAGGCCAAGGTGCGTGTGTGTATTTGGTTTGT
GCGCTGGCAGGCGTGGTGGGCAGTCGCAGAATGCCTGTTTCGGGCCGCCT
CTGAGCGCTGCCATGTGGCCGCGCGACCGCAGGGCTGCACGAGTCGCTAA
AGTCGACGGCAGGCGCGCAGCACCGTGGAACACTCAGCTCGCCTCTGAAT
TCCGCTAGCCACGTGACCGACTCGCCATTTTCTCGGTCTTGGCTGACCAG
CACAAGCCAACGCGCACTGCGCATGCTGGCTCTGCGCTGGTACTGTAATC
CTGGTTCGCAGAGCATAATGGCTTGTTCATGATGTTGTCTCTGTGCATTC
TGCTTGTGCAGTGCCTACACAGGCACAGCAGAGCTGGCAGCATGCTCTCC
AAACACTTCCCTGCATCTGATCAACTCGCTGCGCATGTACCCTATCTGCC
CAGTGCATCCTTGCACTGCCCGCGTCCAGTACTTGTCACCTTGGTCTCAC
ATCATGAACTGATTGCCATTACCTTCTGACAACCCCCCTTTTCATTGCCC
CCCCCCCCCATCCCCACCCTCAACAGCGCATCCGCGAATCCACCGGCTGC
TGCCGCGGCTGGTCCTTCGTCTTCCTCGACCACGAGGTCTGCTGCAAGCA
GAACGAGACCGAAGCCGACGCCACTGCGCCCAATGACCGCCTCGACGCCG
AGAGCGACACTCACGCGTGGCGCGTCTGGGACGACCTCGGCATCTGGAAC
TACGATTTCAACGACGCGTTCCTGTGGAACGCGCGCTTCGGCGGCGGCGG
CGGCAGCGGCGGCAGCGGCGCTAGTGGCGGCGGCAGCGGCGGCGGCGGCG
GCAGCAGCGGCGGCGCTGCGCAATGGAATGCATCGGCGGCAGCGCTGAGT
GCTGCGGCGGGCAACAGCAGCAGCAGCAGTGACGGCGGCAGCATCGGCGG
CGAAAGTTTCGGCAACATTGGCGACGACCGCGGCGAAAGTTTCGGCAACA
TTGGCGACGACCGCGGCAGCATTGGGAACGGCGTTACCGTCGTCGGCGCA
GCGCACGGCGACTTTCGCCGCCGCACCGCCGACAGCACTGTCGCCATTGG
CGGCGTCAGCGGCGGCGGCGGCAGCGACGGCGGTGGCGGTGGAGGCACTG
ACGGAGGCTTTGGTGGAGGCAGCGCAAGCGGTGGTGGTGGTGGCGGTGGT
GGCAGTGGGGGCGGCGGCGGTGGCGGAGGAGGCGGAGGCGGCGGCAGCCA
TGACCACTGTTCAGGCTGGTACGCGGCGGTGGCGTCCACGCCTGGCATCA
GCAGCCAGACGACAGACGTCACGCTGTGGGGCCTGCGCGCGGCCGGCGGC
GGCTACGGCGGCAGGGGCTTTGGTGGCGGCGGCGGCGGCGGCGGCGGATT
CGTGCCCGATTGGAGCGGCGCGATACCCGACATTGGCGCAATGGCGCACG
AGAATCCGGACGTCACCGACGCAGAGGGTACGCCCGCGGCGCCCACAGAA
TCTGCTGCCGAAGCAGCAGAGCTGAGCGCTGTGCACCACCGGCAGCGCGG
CTCCGCCAATGACGGTGCTGCCGCTGCCGCCGCCGCGGCGCCCTGGGACC
TCCGCGACGCCAGCTCGTCCACGCTGCTGAGCACTGCGGCACTGGCTCTC
TCCCTGTGCCTCGTGGTCGCGGCCGCTGCCTCTTTTGTAGCGCGAGGCAG
CGCGGAACGACATCGGGCGGCGGCAAGGTCGCGGCCGGCCGCAGGGGGGT
CGCTGTTGCGCGGCGGCGGCGGCGGCGGCGGCGGCTCGGCAGTGGAGATG
CGAGCGGCAGCTTGCGGCCATAGCGGCAGTACTAGCGGCAGCAGCAGCAG
CAGCAGCGGCGGGCTCTATGGAGCCATTGGAGGCAGCGGCAGCGCCAGCG
GCGCCAACGGCGGTGCCAACATCGCGTAGCTTCTGCTGAATCGCACGCGT
TCATGCGGGGCTACGCTGATTCCTGCGGGCGCGATTCAAGTTTACTGGGG
GGGCGGGGCGCGATGCTCAGCAAAATGGCTGAGCAATCATGACGCCCTCA
GCTGCATGTTTGTTTTTTAAAGCACTTCAGTGACCCGACAATTTTCCGGT
GCGCACTGCAGGCTGGCCCTGTTGCGGTTGCGCGCGTGCATACACGTAGT
GCCCATTGTAAGTGCCGCGGCAGCGGAGGGCATAGAGAGCAGTCTTCTAA
GAAAGAGCGCGTGCCAAATCTGTTCCCCATTCAGCACAAATCACACCCGC
CCTAGAGCGCTCTTTGGTACCTACACCGAATGGCAGCACTCGTGTGGACA
CTACCTGAATAGGTACTGAACTCATCACATTCGGTTCGCCTGAGAGTGAG
GCGCATACATACCAGCTGCTCATTTCTGCAGCGCGCGTTGTCCTGGCCTG
TGTTCTGGCTCGCAAGGCATTGCACTGCTGCATTTCACGAATGCAATGGC
TTTTGCC

Coding sequence (CDS) from alignment at Contig_4:279731..287887-

>mRNA_1565 ID=mRNA_1565|Name=jgi.p|Trimin1|346646|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3501bp|location=Sequence derived from alignment at Contig_4:279731..287887- (Tribonema minus UTEX_B_3156 )
ATGGAGCCACAGTGCTCCATCCGCCGCGCCGGCGGCTTCTTCGATGATGC
ATCGCTCGCGTTCCTGGACTGTTCCGCGCGCCACTTCGCCGCCACTGTGT
CGCATTGGGCGGGCTGGGAGGAGTCGCGCGCGCAGTGCTCTATGGCCGGC
CTCGCGGTCTGCGACGCGCTCGTCCTCACGCAGGCGCAGCTCGGCGGCAA
GGGCCTCGCAGAGTACCTCACAGCGCTCATCGCCGTGCCGAGCGCTGCCC
CACGCCTCGTCGCGCAGACACACCGCTTCGGCTGGTCGCCGGCGCGCGCG
TTCCGCACCGCACAGGAGCGCAACCCGCTGTTCTACGCCGGCGCCGCCGC
CGCCGCCGCTGCTGCCGCGGAACAGGAAGCCGCCGCCGCTGCTGCTGCCG
CGGAACAGCAAGCCGCCGCTGCCCCTGCCGCTGCTGCCGCGGAACAGGAA
GCCGCGGCGGCAGCGGCGGCAGGTGAGCACGGTGGCTCTGTTGGCGGACC
TGCGGCTGAGGCGCCGCGGCACGGCAGCGACAGCGGCAGCGGATTGGATG
GCGCAGATGAAGACGTCGACGGCGCTGCTGCTGCGGCGGCTGCTGCCGCA
ATCCCCGTTACCGATGCAGCGGCGACGACGGACGCGTCGCCCCTCAATGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGGTGCGCCAGCGC
TCAGTGAGCATCAAGTCATCAGCGGCGCCGCTGCGCCTGCCGCGGTCAGC
CTGCAGGAGCTCACCGATGAGCACGACACAGCAGCGCCAAGCGCTGCCCC
CACGTCCGCATCAGTCATACCTACCCTCATCAGCAGCAGCGTTGCAGCAG
CAGGCGAGACGGCTGCGCCAGAACGCGGTGATGACGTGCCGGAGATACCG
GGTCCGCCGCGGATAGAGGGCGGCGGCGGCAGCGGCGCTGGATTCCAGGT
CTACTGCAACGCGACGCTGCTGGTGACAGCGGGCGGCGGCGGCGGCGGCG
GCGTCGAGGGCAACCTGGCCAACGTCACCGACAGCTCGCTGGGCGGCGGC
GGCGGCGGCGGCGCGCAGGTCAACAGGAAGGTGCTCCTGCACTGGCTCGC
GCACTACGGCGGCGTCAACGTTGATGCGGCCGATGGCAGTGGCACTGGCA
CCGGCGGCGGCGACGCTGGCAGTGCTGGCAGCAGCAGCAGCGGCGGTGGC
AGCAGCGGCGGCAGCAGCGACGGCGCTGGCAGCGGCGGCGGTAGCGGCAG
CGGAGACCCCGATGCGGCGGCGCTGTGGCTGGCGCTCAACGCCACAACCA
TGGTGGCGGGCGGGGCGGAGGAGGCGGGGGGGCGGTGGGTGTCGGTGGGC
GGCGGCAGCGGGTGCGGCACGTGCAGCACGATGGACGCGACGTGCCTGTT
GGCGGCGCGCGTGGGCTACATCATCTGCGGCACGAAGTTGGACGATGATT
TTGACGCGGGGGAGGGGGGCGAGGCGCGCCTGGCCACGCTGTCGACGGCG
CTGCAGACGGTTATGCGCAGCTGCCACAGCGACGGCATGCTCTGGGTCGA
GGGGGGCGGCGGCGGCGGCGGCGGCACCGCAGAGTGCTGCACCCCCTTCA
TGGGCGGTTACGGCTTCGGTTTCACGCTGGGCAGCCGGGGCGTGGAGTTT
GCGAATGCCACACAGGCGGGGCAGACGTACGTAGATTTTACGACGGACTC
TGGTGCGGAGGGCGGTGCTGGAGACAGCAGCAGCGAGTCGTATATACTGG
AGCGGGGCTCCGGCAATCCGCTGCACGTGGACCCAGACGCCAACAACACC
GCAAAAACAGGAGACTGGGGGGGGACGCAATACGCGCCCGGAATGGGGGG
TGGGGAGGGGGCAGGGGCAGGGGGTGGGGAGGGCGGGGGGTGGGGGGGGG
GCTGGCATGCATATGCGGACAAGTACATGCAGGGGGAGCAGGATGGCTCC
CAGCCTGCGCAGAATGACACCCTGACGGGGCCTGATGCCGTTGACCGCAA
CAACGGCACGGAGGGGGAGGGCGACGCCGGCGCGGGCGCGCGCGCGGTGC
AGTTCAAGTGGGACAAGGTCGGCTACCTCATGTACAACGCGTCGCTCACG
TGCGAGCAGGGGTGGGGCGACTGGTGCTGCGTCTGCACGGAGGCCAAGCG
CATCCGCGAATCCACCGGCTGCTGCCGCGGCTGGTCCTTCGTCTTCCTCG
ACCACGAGGTCTGCTGCAAGCAGAACGAGACCGAAGCCGACGCCACTGCG
CCCAATGACCGCCTCGACGCCGAGAGCGACACTCACGCGTGGCGCGTCTG
GGACGACCTCGGCATCTGGAACTACGATTTCAACGACGCGTTCCTGTGGA
ACGCGCGCTTCGGCGGCGGCGGCGGCAGCGGCGGCAGCGGCGCTAGTGGC
GGCGGCAGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGCTGCGCAATGGAA
TGCATCGGCGGCAGCGCTGAGTGCTGCGGCGGGCAACAGCAGCAGCAGCA
GTGACGGCGGCAGCATCGGCGGCGAAAGTTTCGGCAACATTGGCGACGAC
CGCGGCGAAAGTTTCGGCAACATTGGCGACGACCGCGGCAGCATTGGGAA
CGGCGTTACCGTCGTCGGCGCAGCGCACGGCGACTTTCGCCGCCGCACCG
CCGACAGCACTGTCGCCATTGGCGGCGTCAGCGGCGGCGGCGGCAGCGAC
GGCGGTGGCGGTGGAGGCACTGACGGAGGCTTTGGTGGAGGCAGCGCAAG
CGGTGGTGGTGGTGGCGGTGGTGGCAGTGGGGGCGGCGGCGGTGGCGGAG
GAGGCGGAGGCGGCGGCAGCCATGACCACTGTTCAGGCTGGTACGCGGCG
GTGGCGTCCACGCCTGGCATCAGCAGCCAGACGACAGACGTCACGCTGTG
GGGCCTGCGCGCGGCCGGCGGCGGCTACGGCGGCAGGGGCTTTGGTGGCG
GCGGCGGCGGCGGCGGCGGATTCGTGCCCGATTGGAGCGGCGCGATACCC
GACATTGGCGCAATGGCGCACGAGAATCCGGACGTCACCGACGCAGAGGG
TACGCCCGCGGCGCCCACAGAATCTGCTGCCGAAGCAGCAGAGCTGAGCG
CTGTGCACCACCGGCAGCGCGGCTCCGCCAATGACGGTGCTGCCGCTGCC
GCCGCCGCGGCGCCCTGGGACCTCCGCGACGCCAGCTCGTCCACGCTGCT
GAGCACTGCGGCACTGGCTCTCTCCCTGTGCCTCGTGGTCGCGGCCGCTG
CCTCTTTTGTAGCGCGAGGCAGCGCGGAACGACATCGGGCGGCGGCAAGG
TCGCGGCCGGCCGCAGGGGGGTCGCTGTTGCGCGGCGGCGGCGGCGGCGG
CGGCGGCTCGGCAGTGGAGATGCGAGCGGCAGCTTGCGGCCATAGCGGCA
GTACTAGCGGCAGCAGCAGCAGCAGCAGCGGCGGGCTCTATGGAGCCATT
GGAGGCAGCGGCAGCGCCAGCGGCGCCAACGGCGGTGCCAACATCGCGTA
G