Trimin1|346646|estExt_Genemark1.C_Ctg_40032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346646
Unique NameTrimin1|346646|estExt_Genemark1.C_Ctg_40032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1167
Homology
BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A836CD32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD32_9STRA)

HSP 1 Score: 1461 bits (3783), Expect = 0.000e+0
Identity = 1166/1166 (100.00%), Postives = 1166/1166 (100.00%), Query Frame = 0
Query:    1 MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA 1166
            MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA
Sbjct:    1 MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAGLAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARAFRTAQERNPLFYAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPALSEHQVISGAXXXXXVSLQELTDEHDTAXXXXXXXSASVIPTLISSSVAAAGETAAPERGDDVPEIPGPPRIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGMLWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATAPNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSIGGESFGNIGDDRXXXXXXXXXXXXSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDHCSGWYAAVASTPGISSQTTDVTLWGLRAAXXXXXXXXXXXXXXXXXGFVPDWSGAIPDIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDXXXXXXXXXPWDLRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEMRAAACGHSGSTXXXXXXXXXXLYGAIGGXXXXXXXNGGANIA 1166          
BLAST of jgi.p|Trimin1|346646 vs. uniprot
Match: A0A4D9DCE5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCE5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 4.510e-7
Identity = 124/479 (25.89%), Postives = 169/479 (35.28%), Query Frame = 0
Query:  304 RIEGGGGSGAGFQVYCNATLLVTAXXXXXXXVEGNLANVTDSSLXXXXXXXAQVNRKVLLHWLAHYGGVNVDAADGSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPDAAALWLALNATTMVAGGAEEAGGRWVSVGGGSGCGTCSTMDATCLLAARVGY-------------------------------IICGTKLDDDFDAGEGGEARLATLSTALQTVMRSCHSDGM-LWVEGGXXXXXXTAECCTPFMGGYGFGFTLGSRGVEFANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNTAKTGDWGGTQYAPGMGGGEXXXXXXXXXXXXXXXXHAYADKYMQGEQDGSQPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLTCEQGWGDWCCVCTEAK---RIRESTGCCRGW---SFVFLDHEVCCKQNET 744
            RIEGGGGSGAGFQVYC  +LL++A XXXXXXVEG L       L       +                   +  D  G                                             ++LN             G+W SVGGG GCGT        L  A +G                                I+CG  LD    AG  G+  L   + AL   ++ C  +G  L + GGXXXXXXTAECC P   GYGF F +    +E    T+A             EG   +   E      G G PL  D   +  ++ G W   +    + G                     +    +   D + P++    T    + R  G     DA       Q ++D +   ++ AS  C +G+ DWCC+CT+AK   R  E  G  R +   S  +     CC++ +T
Sbjct:  165 RIEGGGGSGAGFQVYCGRSLLISAGXXXXXXVEGRLL------LGKKGRSYSXXXXXXXXXXXXXXXXXXXEEDDAVGKGEKRGNVREAGEQQKQKK--------------------------ISLNRL-----------GKWTSVGGGGGCGT-ERGGTERLHVAGLGREGSQQGQNPRRAYAPQPDGGSPPSNATGNVGILCGQALD----AGTPGKKELDKGARALAATLQWCLGEGQALRMTGGXXXXXXTAECCEPMQLGYGFSFEVV---LERGRGTRA-------------EGRGANLGGEDGGWRVGEGRPLSADS-LSRVSEAGRWQALRTGKQVQG-------------------LSSRARSETAPDAAPPSEGAFQT--QDIARIKGETAAVDA-------QLRYDPLFRYLHEASQACPRGFQDWCCLCTKAKAALRKDEHRGERREFDERSTAWFTRVTCCRKEDT 550          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346646 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CD32_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DCE5_9STRA4.510e-725.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 647..664
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 890..918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 833..861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:280259..287887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346646mRNA_1565Tribonema minus UTEX_B_3156 mRNAContig_4 279731..287887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346646|estExt_Genemark1.C_Ctg_40032 ID=Trimin1|346646|estExt_Genemark1.C_Ctg_40032|Name=jgi.p|Trimin1|346646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1167bp
MEPQCSIRRAGGFFDDASLAFLDCSARHFAATVSHWAGWEESRAQCSMAG
LAVCDALVLTQAQLGGKGLAEYLTALIAVPSAAPRLVAQTHRFGWSPARA
FRTAQERNPLFYAGAAAAAAAAAEQEAAAAAAAAEQQAAAAPAAAAAEQE
AAAAAAAGEHGGSVGGPAAEAPRHGSDSGSGLDGADEDVDGAAAAAAAAA
IPVTDAAATTDASPLNAAAAAAAAAAAAAGAPALSEHQVISGAAAPAAVS
LQELTDEHDTAAPSAAPTSASVIPTLISSSVAAAGETAAPERGDDVPEIP
GPPRIEGGGGSGAGFQVYCNATLLVTAGGGGGGGVEGNLANVTDSSLGGG
GGGGAQVNRKVLLHWLAHYGGVNVDAADGSGTGTGGGDAGSAGSSSSGGG
SSGGSSDGAGSGGGSGSGDPDAAALWLALNATTMVAGGAEEAGGRWVSVG
GGSGCGTCSTMDATCLLAARVGYIICGTKLDDDFDAGEGGEARLATLSTA
LQTVMRSCHSDGMLWVEGGGGGGGGTAECCTPFMGGYGFGFTLGSRGVEF
ANATQAGQTYVDFTTDSGAEGGAGDSSSESYILERGSGNPLHVDPDANNT
AKTGDWGGTQYAPGMGGGEGAGAGGGEGGGWGGGWHAYADKYMQGEQDGS
QPAQNDTLTGPDAVDRNNGTEGEGDAGAGARAVQFKWDKVGYLMYNASLT
CEQGWGDWCCVCTEAKRIRESTGCCRGWSFVFLDHEVCCKQNETEADATA
PNDRLDAESDTHAWRVWDDLGIWNYDFNDAFLWNARFGGGGGSGGSGASG
GGSGGGGGSSGGAAQWNASAAALSAAAGNSSSSSDGGSIGGESFGNIGDD
RGESFGNIGDDRGSIGNGVTVVGAAHGDFRRRTADSTVAIGGVSGGGGSD
GGGGGGTDGGFGGGSASGGGGGGGGSGGGGGGGGGGGGGSHDHCSGWYAA
VASTPGISSQTTDVTLWGLRAAGGGYGGRGFGGGGGGGGGFVPDWSGAIP
DIGAMAHENPDVTDAEGTPAAPTESAAEAAELSAVHHRQRGSANDGAAAA
AAAAPWDLRDASSSTLLSTAALALSLCLVVAAAASFVARGSAERHRAAAR
SRPAAGGSLLRGGGGGGGGSAVEMRAAACGHSGSTSGSSSSSSGGLYGAI
GGSGSASGANGGANIA*
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