mRNA_15617 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352504
Unique Name	mRNA_15617
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A836CJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ56_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.340e-59
Identity = 99/124 (79.84%), Postives = 101/124 (81.45%), Query Frame = -3

Query:   83 WHIRRRHGLPIHQLGLLLTQLLLLLHERLLLPPESFEVLLELLHIHTKVHRLLWVPFPFLL*HLLHIIHFDFHSVNLALHLDNGLRDYAQLCLDAIVAAACWCXXXXCWWCGRSLGLGRHAAGC 454
            WHIRRRHGLPIHQLGLL               PESFEVLLELLHIH KVHRLL V FPFLL HLLHIIHFD HS+NLALHL NGLRD+AQLCLDAI AAACW XXXXCWWCGRSLGLGRHAAGC
Sbjct:   32 WHIRRRHGLPIHQLGLLXXXXXXXXXXXXXXFPESFEVLLELLHIHAKVHRLLRVLFPFLLQHLLHIIHFDLHSINLALHLGNGLRDFAQLCLDAIAAAACWXXXXXCWWCGRSLGLGRHAAGC 155

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835ZAP0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.150e-49
Identity = 125/141 (88.65%), Postives = 126/141 (89.36%), Query Frame = 2

Query:   95 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX-------DRQAMPSPDVPVEPFVRAVTELLKP 496
            MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX       DRQAMPSPDVP E  +    ELL P
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPGELLI----ELLGP 137

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835ZJ20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ20_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.800e-48
Identity = 122/137 (89.05%), Postives = 123/137 (89.78%), Query Frame = 2

Query:   95 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ 505
            MPPKSQTPTAPPAAAPATPAGSSYDGVEAELS VAQAI KVEGQ         DVEKVLQEEGK+NPEQPVYLSMNVQELKEH   XXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSKVAQAITKVEGQXXXXXXXXXDVEKVLQEEGKQNPEQPVYLSMNVQELKEHXXXXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ 137

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835Z167_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z167_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.240e-28
Identity = 97/127 (76.38%), Postives = 98/127 (77.17%), Query Frame = 2

Query:   95 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX-------DRQAMPSPDVP 454
            MPPKSQTPTAPPAAAPATPAGSS DGVEAELS VAQAI                  KVLQEEGK+NPEQPVYLSMNVQELKEHL  XXXXXXXXXXXXXXXXXXXXXXX       DRQAMPSPDVP
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVP 127

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A836CMP2_9STRA (Uncharacterized protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.710e-9
Identity = 74/129 (57.36%), Postives = 87/129 (67.44%), Query Frame = 2

Query:  161 SYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX--------------DRQAMPSPDVPVEPFVRAVTELLKPIAQ 505
            S DG+E +L  V   I KV GQI+ +E +++ V   L+++      QP Y  MNV+ELKE  K XXXXXXXXXXXXXXXXXXXXXXX              DR+AMPSP VPVEPFVRAVTELL+PIAQ
Sbjct:   37 SSDGLEQQLRDVDTEIKKVGGQIENLEKEIDQVMVALEKQ------QP-YRGMNVEELKEEKKQXXXXXXXXXXXXXXXXXXXXXXXXEKILLLEDNARLRDREAMPSPPVPVEPFVRAVTELLRPIAQ 158

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835ZES8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES8_9STRA)

HSP 1 Score: 627 bits (1618), Expect = 3.470e-220
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1

Query:    1 MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA 1584
            MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA
Sbjct:    1 MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA 528

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A836CJH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.950e-13
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1

Query:   52 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 234
            +SFDAALQEL+EFQQQPKED  + +V +R HVQ+V +LYWQA  QAREKGRKL D  E VA
Sbjct:   94 TSFDAALQELVEFQQQPKEDTGSYIVRARRHVQDVKMLYWQAAAQAREKGRKLPDLSECVA 154

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835YLH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.940e-10
Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 1

Query:   52 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 234
            +SFDAALQELI+FQQQP  +I   MV  R HVQ V +LYWQAV QAR+KGRKL D  + VA
Sbjct:   82 TSFDAALQELIKFQQQPNINIGNYMVRPRRHVQAVKMLYWQAVAQARDKGRKLPDLIKCVA 142

[Close]

BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835Z8X0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.140e-9
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 1

Query:   67 ALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 234
            A+ EL+EFQQQ KED  + +V +R HVQ+V +LYWQA  QAREKGRKL D  E VA
Sbjct:   29 AMPELVEFQQQTKEDTGSYIVRARRHVQDVKMLYWQAAAQAREKGRKLPDLFECVA 84

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835YMC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.290e-9
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 1

Query:   52 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 234
            +SFDAALQEL+EFQQQPK +IS  MV +R HVQ V +LYWQAV QAR+      D  E VA
Sbjct:  279 TSFDAALQELVEFQQQPKANISNYMVRARRHVQTVKMLYWQAVAQARDHHGSYPDLVECVA 339

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352504 vs. uniprot
BLAST of jgi.p|Trimin1|352504 vs. uniprot

BLAST of jgi.p|Trimin1|352504 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A836CJ56_9STRA	1.340e-59	79.84	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAP0_9STRA	1.150e-49	88.65	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZJ20_9STRA	3.800e-48	89.05	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z167_9STRA	1.240e-28	76.38	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CMP2_9STRA	7.710e-9	57.36	Uncharacterized protein n=5 Tax=Tribonema minus Ta...	[more]

BLAST of jgi.p|Trimin1|352504 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835ZES8_9STRA	3.470e-220	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CJH7_9STRA	7.950e-13	68.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLH3_9STRA	4.940e-10	65.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8X0_9STRA	2.140e-9	62.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YMC2_9STRA	7.290e-9	62.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_121	contig	Contig_121:424525..427441 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352504\|estExt_Genemark1.C_Ctg_1210049
Hectar predicted targeting category	other localisation
TranscriptId	352826
Track	FilteredModels1
ProteinId	352504

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352504	gene_15617	Tribonema minus UTEX_B_3156	gene	Contig_121 424525..427441 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352504	Trimin1\|352504\|estExt_Genemark1.C_Ctg_1210049	Tribonema minus UTEX_B_3156	polypeptide	Contig_121 425764..427439 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15617_1	exon_15617_1	Tribonema minus UTEX_B_3156	exon	Contig_121 424525..424579 +
exon_15617_2	exon_15617_2	Tribonema minus UTEX_B_3156	exon	Contig_121 425725..426051 +
exon_15617_3	exon_15617_3	Tribonema minus UTEX_B_3156	exon	Contig_121 426073..426145 +
exon_15617_4	exon_15617_4	Tribonema minus UTEX_B_3156	exon	Contig_121 427390..427441 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_15617	UTR5_15617	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_121 424525..424579 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15617	CDS_15617	Tribonema minus UTEX_B_3156	CDS	Contig_121 425764..426051 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15617	UTR3_15617	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_121 427440..427441 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_121:424525..427441+
coding sequence from alignment at Contig_121:424525..427441+

spliced messenger RNA

>mRNA_15617 ID=mRNA_15617|Name=jgi.p|Trimin1|352504|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=507bp|location=Sequence derived from alignment at Contig_121:424525..427441+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGCAGCAGCAGCCAGCGGGCAGCGGGGTGTAACAGCAGCCGCAGTGGCA
CAAAGGGTTAGAGTCCTGGGTGCTCGACATCAACAGCCTGCAGCATGCCG
CCCAAGTCCCAAACTCCGACCGCACCACCAGCAGCAGCACCAGCAACACC
AGCAGGCAGCAGCTACGATGGCGTCGAGGCAGAGCTGAGCATAGTCGCGC
AGGCCATTATCAAGGTGGAGGGCCAAATTGACGCTGTGGAAATCAAAGTG
AATGATGTGGAGAAGGTGCTACAGGAGGAAGGGAAACGGAACCCAGAGCA
GCCGGTGTACCTTAGTATGAATGTGCAGGAGCTCAAGGAGCACCTCAAAG
CTCTCAGGAGGGAGAAGGAGGCGCTCATGAAGGAGAAGGAGCAGCTGCGT
GAGGAGAAGGCCAAGCTGATGGATAGGCAGGCCATGCCGTCTCCTGATGT
GCCAGTTGAGCCTTTTGTGCGGGCAGTTACAGAGCTCTTGAAGCCTATAG
CGCAAGC

protein sequence of jgi.p|Trimin1|352504

>Trimin1|352504|estExt_Genemark1.C_Ctg_1210049 ID=Trimin1|352504|estExt_Genemark1.C_Ctg_1210049|Name=jgi.p|Trimin1|352504|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEI
KVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKALRREKEALMKEKEQ
LREEKAKLMDRQAMPSPDVPVEPFVRAVTELLKPIAQ

mRNA from alignment at Contig_121:424525..427441+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15617 ID=mRNA_15617|Name=jgi.p|Trimin1|352504|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2917bp|location=Sequence derived from alignment at Contig_121:424525..427441+ (Tribonema minus UTEX_B_3156 )
CAGCAGCAGCAGCCAGCGGGCAGCGGGGTGTAACAGCAGCCGCAGTGGCA
CAAAGGTAAGCAATAGCACAGCACAAAGCAAACCATAGCGAACATGGAGC
TCCAGTAGCAGCAGTAGCAGACAAAGCCTTCAGGAGCACAGATACACACA
TTCAGCGCACGCTGCGCAGCAGTAAGCAGGACGGGGCAGCAGGGCAGTAC
CACACTGTAAGCTGCTGCCTGCCTGACCATGCCTTACGAACTTGCAGGCG
GAGACGGCTTGACGATGCGCAGGTGTGACTCTGCGATTAAATGGCTGAAG
GAGGAGTATCCTTGAGGTCACATGGCAAAAAAGCCAGGCAAAGTCATAGC
AGTTGTCCGTCTTGCTGGTCCTTTACTCTTGCGTGCTTGCATACATGCGA
ACGTAGCTTTGTGCACAAAGTGCAGTGGTGGGAAGCACAGTCAGATGTGC
GAACGCTTTTTTGTGCACTACTTTATAGTTCGACATTTCCTCCCCTCAGC
GGTCGTGTAGAAATATTTCACCTTGCACAGAAGTACGTTTAAGGCCCTGC
TGACCGAATCGCAAATGATTAAGTTCAGGCTGACTTTTCTTCGTGACTTT
GACACCTTATGGAGCAGTTAAGATCTCCCCCTGAGGGCCCTCTCACATCC
CAAACATGTGCACATCCGGCAAGCGGGAGTGTCGCTTACTACAGCTGGAA
CCTCTGCACGCCGACACTCACGTTACGCACTGCCTTGAACGCCAATGCAG
GACAGATACGTTGTGCGCTGTAACAATGGGCACATTCTGCTCTGTCCAGT
GAGCCTGCTGCAGGCAAGAGGATTCTGCCGCGAACGCAAATCAGTAATTG
CAGCTCAGCCAAGCGAATGACTACCACAACAGTCGGTACGAGCACGGTCA
GGGGTTGACCATAAGATCTTGTGATGACCATGTAGGGAATCAGTCTGATA
ATTCAGTATTGCACTAGTGTCATGCAGGTGCTCTGTGAGTTTTGAAAACC
ACTTGCAGGCACCGCGAGCGTGGGGGCCACAGGCGAACAGAGGAAACAGG
CAGTGCAAATGCTTTAGGATTGGCCCGGAGATATGCTGACAGGCAGCTCT
ACGATGGTCTTCTGAGTGCTCATGCCTACTTGTAGCCACACTGATGTTGT
CGTCGGATTCTTACACTGTCCTGCTTGCCTGTCCACTCCTGCTGAGACAG
GGTTAGAGTCCTGGGTGCTCGACATCAACAGCCTGCAGCATGCCGCCCAA
GTCCCAAACTCCGACCGCACCACCAGCAGCAGCACCAGCAACACCAGCAG
GCAGCAGCTACGATGGCGTCGAGGCAGAGCTGAGCATAGTCGCGCAGGCC
ATTATCAAGGTGGAGGGCCAAATTGACGCTGTGGAAATCAAAGTGAATGA
TGTGGAGAAGGTGCTACAGGAGGAAGGGAAACGGAACCCAGAGCAGCCGG
TGTACCTTAGTATGAATGTGCAGGAGCTCAAGGAGCACCTCAAAGCTCTC
AGGAGGGAGAAGGAGGCGCTCATGAAGGAGAAGGAGCAGCTGCGTAAGGA
GAAGGAGCAGCTGCGTGAGGAGAAGGCCAAGCTGATGGATAGGCAGGCCA
TGCCGTCTCCTGATGTGCCAGGTGTCATGAGCAATGACTGCTGCGTTCAT
GCTGTTGAAAGTTGGCCGCGCGGTGTTGAATAATACTATAAGGGTTGAGT
GAACGGTAGGCATGAACGCCACTACGACGCGCCGCGGTTATGCAACTACT
TGACCTCACCTGCTATATAAAGGGATCATAACCTTGTCAGCGTTTGCGCA
TACATGTGTCGGATGCTCTTTGTGATAGCCTGGCTTCGTTTTTTTGACAC
TGGATCAAGCAATTTCAAGTAAACTGAACACAACCCCTAGAAGAATGCAA
AGGGGAGATCAGCTGGGGACGAATGTTTTCAGAAGATCTTGATGACTGCA
TCAGCCTGAAGGTCAATGTAGTTGGCTTGTCGATAAGGCAAACCGGTGAT
GCAAGACCAACACCATGTATGCGATCGCATTCATATGATCACTCAACCTG
TACTCAATGCTGGATCATCACCTCCGGATTGTGTACATCTGCAAAATATG
TGGCATCCTGTGCTGGTGACACATTATTTGCACCCTGATGGGCACGTTTT
TGCACCAGCAATAAGTCATTCCAAGGGTGCAGCTGATGATCGGCGGATAA
ATAATTTCAGTGGCGCAATTGTGCTTGAGGGTTATTGGCTGATTGCAAGC
ACAGGCTGCATATTGCGAAGGCGGTCTTGCACACTTAGTTGCCTCTTGCA
GCAGCAGCAGCACCTGAGACCAACTTCAACTTCACCTTGCAAAAGTGCAC
CTTGTCTGTACACTTGCTTGCAGAAGTCCCAGTGCAGAGTGACCATGGAT
TATTTTGATGATGCCAATAACAAAAGCGTTGGGCAAGATTATCTGCTGCG
CGATGGTACGAATGCGGAAGTCCTTTGCCGACTTTTGTAACAGCCATTAT
TTCGGAAACATCCACCATTCGTCGGTGAATATTTACTGTAAATGTCAATG
CGAGTTGTAGATTTTTGTGACGGCATTGATCATGTGGTTGTTACAAGCAA
TCTACTGAAGCCGGTGTGACCGCATCCAAGGAAAACACCATAGACTACAT
GTAAATTGCGCGAATTTGCATCAGGGAGGTTCAAGTCACGACGTCAACTA
TGGTGCTCTACAGCATATGCGTTGTGCAGGCCTGTGCCTTGCTCTAGTCA
GGAACACCTGTAATTGTTGAAAAAGAATAACTCTTGGTTATGTGCTGTGG
TGCTTTTAGTTAGCTGTACTGACACTCCCTCCACCCGACACCTCTTCTCT
GCCTGCTTTTGACAGTTGAGCCTTTTGTGCGGGCAGTTACAGAGCTCTTG
AAGCCTATAGCGCAAGC

Coding sequence (CDS) from alignment at Contig_121:424525..427441+

>mRNA_15617 ID=mRNA_15617|Name=jgi.p|Trimin1|352504|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=411bp|location=Sequence derived from alignment at Contig_121:424525..427441+ (Tribonema minus UTEX_B_3156 )
ATGCCGCCCAAGTCCCAAACTCCGACCGCACCACCAGCAGCAGCACCAGC
AACACCAGCAGGCAGCAGCTACGATGGCGTCGAGGCAGAGCTGAGCATAG
TCGCGCAGGCCATTATCAAGGTGGAGGGCCAAATTGACGCTGTGGAAATC
AAAGTGAATGATGTGGAGAAGGTGCTACAGGAGGAAGGGAAACGGAACCC
AGAGCAGCCGGTGTACCTTAGTATGAATGTGCAGGAGCTCAAGGAGCACC
TCAAAGCTCTCAGGAGGGAGAAGGAGGCGCTCATGAAGGAGAAGGAGCAG
CTGCGTGAGGAGAAGGCCAAGCTGATGGATAGGCAGGCCATGCCGTCTCC
TGATGTGCCAGTTGAGCCTTTTGTGCGGGCAGTTACAGAGCTCTTGAAGC
CTATAGCGCAA