Trimin1|352504|estExt_Genemark1.C_Ctg_1210049 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352504
Unique Name	Trimin1\|352504\|estExt_Genemark1.C_Ctg_1210049
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	137

Homology

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835ZAP0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP0_9STRA)

HSP 1 Score: 165 bits (417), Expect = 7.130e-50
Identity = 125/141 (88.65%), Postives = 126/141 (89.36%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX-------DRQAMPSPDVPVEPFVRAVTELLKP 134
            MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX       DRQAMPSPDVP E  +    ELL P
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPGELLI----ELLGP 137

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835ZJ20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ20_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.300e-48
Identity = 122/137 (89.05%), Postives = 123/137 (89.78%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ 137
            MPPKSQTPTAPPAAAPATPAGSSYDGVEAELS VAQAI KVEGQ         DVEKVLQEEGK+NPEQPVYLSMNVQELKEH   XXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSKVAQAITKVEGQXXXXXXXXXDVEKVLQEEGKQNPEQPVYLSMNVQELKEHXXXXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPVEPFVRAVTELLKPIAQ 137

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A835Z167_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z167_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.490e-29
Identity = 97/127 (76.38%), Postives = 98/127 (77.17%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX-------DRQAMPSPDVP 120
            MPPKSQTPTAPPAAAPATPAGSS DGVEAELS VAQAI                  KVLQEEGK+NPEQPVYLSMNVQELKEHL  XXXXXXXXXXXXXXXXXXXXXXX       DRQAMPSPDVP
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVP 127

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BLAST of jgi.p|Trimin1|352504 vs. uniprot
Match: A0A836CMP2_9STRA (Uncharacterized protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.210e-9
Identity = 74/129 (57.36%), Postives = 87/129 (67.44%), Query Frame = 0

Query:   23 SYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXX--------------DRQAMPSPDVPVEPFVRAVTELLKPIAQ 137
            S DG+E +L  V   I KV GQI+ +E +++ V   L+++      QP Y  MNV+ELKE  K XXXXXXXXXXXXXXXXXXXXXXX              DR+AMPSP VPVEPFVRAVTELL+PIAQ
Sbjct:   37 SSDGLEQQLRDVDTEIKKVGGQIENLEKEIDQVMVALEKQ------QP-YRGMNVEELKEEKKQXXXXXXXXXXXXXXXXXXXXXXXXEKILLLEDNARLRDREAMPSPPVPVEPFVRAVTELLRPIAQ 158

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352504 vs. uniprot

BLAST of jgi.p|Trimin1|352504 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835ZAP0_9STRA	7.130e-50	88.65	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZJ20_9STRA	2.300e-48	89.05	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z167_9STRA	8.490e-29	76.38	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CMP2_9STRA	3.210e-9	57.36	Uncharacterized protein n=5 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_121	contig	Contig_121:425764..427439 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352504	mRNA_15617	Tribonema minus UTEX_B_3156	mRNA	Contig_121 424525..427441 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352504|estExt_Genemark1.C_Ctg_1210049 ID=Trimin1|352504|estExt_Genemark1.C_Ctg_1210049|Name=jgi.p|Trimin1|352504|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEI
KVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKALRREKEALMKEKEQ
LREEKAKLMDRQAMPSPDVPVEPFVRAVTELLKPIAQ