mRNA_15612 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352502
Unique Name	mRNA_15612
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352502 vs. uniprot
Match: A0A836CLF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.640e-63
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1

Query:    1 MADDPIFSVAPNILGFLPPDAASSEHLDVLQWARANGCPWDENTCTFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEWTYAXXXXXXXXXXXXXXXXXXXXXETCSCARRLSADFADNGXXXXXXXXXXXXXXEPMRPMYGNSSSEEYQTSDGGSYASDDSDQDFXXXXXXXXGIESSDQXSEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAETDGKASPAREAREAGVFSESMEL 960
            MADDPIFSVAPNILGFLPPDAASSEHLDVLQWARANGCPWDENTCTFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEWTYAXXXXXXXXXXXXXXXXXXXXXETCSCARRLSADFADNGXXXXXXXXXXXXXXEPMRPMYGNSSSEEYQTSDGGSYASDDSDQDFXXXXXXXXGIESSDQXSEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAETDGKASPAREAREAGVFSESMEL
Sbjct:    1 MADDPIFSVAPNILGFLPPDAASSEHLDVLQWARANGCPWDENTCTFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEWTYAXXXXXXXXXXXXXXXXXXXXXETCSCARRLSADFADNGXXXXXXXXXXXXXXEPMRPMYGNSSSEEYQTSDGGSYASDDSDQDFXXXXXXXXGIESSDQXSEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAETDGKASPAREAREAGVFSESMEL 320

[Close]

BLAST of jgi.p|Trimin1|352502 vs. uniprot
Match: A0A835Z2C7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.100e-5
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 1

Query:   37 ILGFLPPDAASSEHLDVLQWARANGCPWDENTCTFAA 147
            +L F+ P A +  HL VLQWARANGCPWDE+TC+F A
Sbjct:    1 MLYFVDPYAMTGAHLGVLQWARANGCPWDESTCSFPA 37

[Close]

BLAST of jgi.p|Trimin1|352502 vs. uniprot
Match: A0A835ZGX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGX2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.880e-5
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 1

Query:    4 ADDPIFSVAPNILGFLPPD-------AASSEHLDVLQWARANGCPWDE 126
            AD P+ ++A +IL FLPP        AA +  L+VLQWA ANGCPWD+
Sbjct:   15 ADHPVLTLASHILAFLPPSIMEVCSAAAEAGDLEVLQWAHANGCPWDQ 62

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352502 vs. uniprot

BLAST of jgi.p|Trimin1|352502 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CLF1_9STRA	1.640e-63	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2C7_9STRA	3.100e-5	64.86	SET domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835ZGX2_9STRA	7.880e-5	52.08	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_121	contig	Contig_121:403950..410873 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352502\|estExt_Genemark1.C_Ctg_1210046
Hectar predicted targeting category	other localisation
TranscriptId	352824
Track	FilteredModels1
ProteinId	352502

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352502	gene_15612	Tribonema minus UTEX_B_3156	gene	Contig_121 403950..410873 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352502	Trimin1\|352502\|estExt_Genemark1.C_Ctg_1210046	Tribonema minus UTEX_B_3156	polypeptide	Contig_121 403950..410329 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15612_1	exon_15612_1	Tribonema minus UTEX_B_3156	exon	Contig_121 403950..404005 +
exon_15612_2	exon_15612_2	Tribonema minus UTEX_B_3156	exon	Contig_121 404498..404815 +
exon_15612_3	exon_15612_3	Tribonema minus UTEX_B_3156	exon	Contig_121 404903..405014 +
exon_15612_4	exon_15612_4	Tribonema minus UTEX_B_3156	exon	Contig_121 405070..405277 +
exon_15612_5	exon_15612_5	Tribonema minus UTEX_B_3156	exon	Contig_121 409282..409384 +
exon_15612_6	exon_15612_6	Tribonema minus UTEX_B_3156	exon	Contig_121 410164..410873 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15612	CDS_15612	Tribonema minus UTEX_B_3156	CDS	Contig_121 403950..404005 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15612	UTR3_15612	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_121 410330..410873 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_121:403950..410873+
coding sequence from alignment at Contig_121:403950..410873+

spliced messenger RNA

>mRNA_15612 ID=mRNA_15612|Name=jgi.p|Trimin1|352502|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1507bp|location=Sequence derived from alignment at Contig_121:403950..410873+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGACGACCCGATCTTCAGCGTCGCCCCAAATATCCTGGGCTTCCT
GCCTCCAGACGCTGCAAGCAGCGAGCATCTGGACGTCCTGCAGTGGGCGC
GCGCCAATGGCTGCCCCTGGGACGAGAACACGTGCACGTTCGCTGCAGCA
GACGGGCACCTTGCGGCTGTGCAGTGGGCGCGTGCCAACGGGTGCCTGTG
GGATACGTTCACGACCGCCAATGCTGCAGCAGGAGGGCACCTTGCGGTGC
TGCAGTGGGCGCATGCCAACGGGTGCCCCTGGGATGAGTGCACGTGCACA
CGTGCTGCCAGGGAGGGGCACCTGCAGGTCCTGCAGTGGGCGCGTGCCAA
CGGGTGTCCCTGGTCCGAGTGGACCTATGCTGCCAAGGACGGGCAGCTGG
AGGTGCTGCAATGGGCGCGCGCCAATGGGTGCCCCTGGGACGAGGAGACG
TGCAGCTGCGCGCGGCGGTTATCTGCCGATTTTGCAGACAACGGGCACCG
GCATGTGGTGAAGTGGGCACGTGCCAATGGATGCCCCGAGCCCATGCGCC
CCATGTATGGCAACAGCTCTAGCGAGGAGTACCAGACATCCGATGGCGGC
TCTTACGCGTCTGACGATAGCGACCAGGACTTCAGCGATGAGGACACGAG
CGATGATGGCATTGAGAGCTCCGACCAGGAAAGCGAGGGCTCTGCGGTGG
TGGTGGCGGCAGCAGCAGCGGCGGCGGCGGCAGTGGCAGCAGCGGCGGCG
GCGGCACTGGCAGCAGCGGCGGCGGCAGCAGCGGCGGTGTGGCGAAAGTT
GGACGACGACTCAGGTGGCGACTCGGACGATGACTCAGACGGGGAGCGCG
GCAGCGAAGCCGGCGGTGGCGGCGGCGGCGGCGATGCAGAGACAGATGGG
AAGGCAAGCCCGGCGCGCGAGGCACGCGAGGCGGGTGTCTTCAGCGAGAG
CATGGAGCTCTGAGGCAGCAGTTACAACCGTTGTAACTGCCGTAACTGTC
AGCGAGGGGGCGCCGAGCTCTCAGGGCAGGAGCTTTGGCCGTTGCAACTG
TCAGACTACTACCTGTCGGAAAGTAACTGTCAGAAGTAGCAGTCCACCCA
CTCCCCGGGGGGCTGTCCAATGTAGGTATGCACACAGCTTACAGCGAGCG
TTTTCGGTTGAGCAGCCTGATATAACCCCACCCCCCCACACCTTTCCCTC
GGGGTCGGGGGGGATGGCCGTGGCAGACAAACGGCTGGTGTCGCAATTGG
GGGGTGTCCCATACGGCAGCGTGTTGACGCGCCGCCGCTGCTGCCGATGG
GGCGTGGCTGAGCAGCTGATGACCGACGTGGGGATGCTCAGCAGCAGCAG
CAGCAGCGCGCGACATGGCTCTTGCGTGATGCGCGCGCGCGCACGCATAC
CGGCGCTTCTCACGGGGCACATCCCCTTACATAGCTGTAAATACGTCGTC
ACAAAACAAAGAAAAATCAGAATATAATCATTACGACGGTTGGCGCGCGG
AGCGGCC

protein sequence of jgi.p|Trimin1|352502

>Trimin1|352502|estExt_Genemark1.C_Ctg_1210046 ID=Trimin1|352502|estExt_Genemark1.C_Ctg_1210046|Name=jgi.p|Trimin1|352502|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=321bp
MADDPIFSVAPNILGFLPPDAASSEHLDVLQWARANGCPWDENTCTFAAA
DGHLAAVQWARANGCLWDTFTTANAAAGGHLAVLQWAHANGCPWDECTCT
RAAREGHLQVLQWARANGCPWSEWTYAAKDGQLEVLQWARANGCPWDEET
CSCARRLSADFADNGHRHVVKWARANGCPEPMRPMYGNSSSEEYQTSDGG
SYASDDSDQDFSDEDTSDDGIESSDQESEGSAVVVAAAAAAAAAVAAAAA
AALAAAAAAAAAVWRKLDDDSGGDSDDDSDGERGSEAGGGGGGGDAETDG
KASPAREAREAGVFSESMEL*

mRNA from alignment at Contig_121:403950..410873+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15612 ID=mRNA_15612|Name=jgi.p|Trimin1|352502|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6924bp|location=Sequence derived from alignment at Contig_121:403950..410873+ (Tribonema minus UTEX_B_3156 )
ATGGCAGACGACCCGATCTTCAGCGTCGCCCCAAATATCCTGGGCTTCCT
GCCTCCGTCGCTAATGACCAGAAGCACCTGCCACACCTTCCACGATATCT
TAGAGCATGGCCCGGCTCCACGGAAGCACCAGACTGTGGCGGCGGATGCA
GTCGGCAGCGCAAGCCTAATTACGTGGGCAGTGCATAGCGGCATGGATCC
CGCCGTGGCGCAGACCTCATGCATCCGCAGGGGCGACATGTCAGCATTGC
TGCTGCTCCGCAGCACCCACGCGACAACATTGCTGCCACGGCACGTCCAG
ATCGCTGTCGCAAAGGGACATCTGCAGCTAGTGCAGTGGCTGCGAGAACG
TTGCCGCCACGCTTACAAGGGAACTACATTGTGCAGATATGCTGCAAAAG
GCGGGCAGCTTGCAGTACTGCAGTGGCTGCGCCAGGTCGGCTGCGCCTGG
GACACCTACGTACCCAGTGCTGCAGCGGCAGGCGGGCATCTTGCGGTGCT
GCAGTGGGCGCACGCCAATGGCTGTCCTTGGGACACTGATACGTGCAGAG
ACGCTGCAAGCAGCGAGCATCTGGACGTCCTGCAGTGGGCGCGCGCCAAT
GGCTGCCCCTGGGACGAGAACACGTGCACGTTCGCTGCAGCAGACGGGCA
CCTTGCGGCTGTGCAGTGGGCGCGTGCCAACGGGTGCCTGTGGGATACGT
TCACGACCGCCAATGCTGCAGCAGGAGGGCACCTTGCGGTGCTGCAGTGG
GCGCATGCCAACGGGTGCCCCTGGGATGAGTGCACGTGCACACGTGCTGC
CAGGGAGGGGCACCTGCAGGTCCTGCAGTGGGCGCGTGCCAACGGGTGTC
CCTGGTCCGAGTGGACGTGCGCACAGGCAGCATCCTAAGGGCACCTTCAC
GTGCTGCAGTGGGCGCGCACCAACGGTTGCCCATAGAATGAGAAAACCTG
CAGCTATGCTGCCAAGGACGGGCAGCTGGAGGTGCTGCAATGGGCGCGCG
CCAATGGGTGCCCCTGGGACGAGGAGACGTGCAGCTGCGCGCGGCGGTTA
TCTGCCGATTTTGCAGTGAGCCCGTGCCAACGGCTGTTCCTGGGACAGTC
AAACCATTTCCCTTGCCAAGGACAACGGGCACCGGCATGTGGTGAAGTGG
GCACGTGCCAATGGATGCCCCGAGCCCATGCGCCCCATGTATGGCAACAG
CTCTAGCGAGGAGTACCAGACATCCGATGGCGGCTCTTACGCGTCTGACG
ATAGCGACCAGGACTTCAGCGATGAGGACACGAGCGATGATGGCATTGAG
AGCTCCGACCAGGAAAGCGAGGGCTCTGGTGAGTAGCATATGTATATCAG
GTCTAGGTGGTGCCATAGGTATGGCATGGTGTGTCAGCGCATGCGTCTGT
GTGATTGCCGGGCTGCTTTATTTGCGATGCAGGGCGTGTGTATTTCTCTG
CAGTCAATGAACGGCGTGCATACTATTGCTACTCGTAGGTGCTTGCAGCA
CCTTCAGTCGAGTTGTGTTGAGTTCTGCTGCTTCTGCTCCTCCTCAGCTG
TTGCCACTTCTGCTTCAGAATCTGCTCGTTGCTGTTTCTAATGCCAGTGT
ACTGGGGGGGCGCATATGGTAAACAAGTTGGTTGCTCATCCAGATGAACT
TCTTGAAGTTGAAATAGGCTGCGTCAGCTCAGCGTGGTGCCGCTACGGAT
TTGCATGACGTTGTAGTCACAGTGCAGCATGCATCTGCCATGCCCAGCGG
TGCATGTCTAGACCTTGCTGCCAGTGCTGTCGATCAAAGGGACAACGGGC
ATGAAAGTTTCGCGCGGATAACCACGCCATTGAGCGCACTCCGTTTGCTT
GGCAATGCTCATCGCTGGAAAACATGCATGAGCTGGGTCTGGTGAGTAGC
CATTGTGAGGACAGGTGCTGTTGCAGCTTTGATGAGTAGTGGTTGCGAGA
GTAGCTGCTGTCATGACCATGATAGCGGGGGTCTGGTGAGAAGCCGTTGT
GAGGACAGGTGCTGTTGCAGCTCTGATGAGTAGTGGTTGCGAGAGTAGCT
GCTGATGTCAGCACACGCGCCATTGTGTGCGCTGGCCCTTGTCAAAGACT
ACGGCTTGCGCATTCGCTTGCATGCAGTCGATGAATGCACTGGATTGCAG
CTCCTCCAAGACAGGTTTTGGTCAGAATTGTGTTGCTTGCGCTGCTTCTG
ATGCCATTGTACTGTGCGATCTGTATGGCCCTGTAGCGGCGCCAGAGTGT
TGTGCTGCAAGTGGCTCATGTAGATGGACGTGGCAGGCGGCGTTGGCTTG
TGCTGCGCTGCTTGTGATTGCAGTACACGTGCAGTCACCACGTAGGTACT
GCAAGTGGCATGCAATGCATTTTGCTTTTTTTCATGCACTTCAGAACATG
GTTTGCTTCGTTAACATTTCAACTCTCAAATCTTGGCAAGTTGCAACATT
CTTCATCTGAATCTCAGCATGCATTTGCAGTGCGCGCGCATGTTGCCATG
AGAAGACCCCATTCACTCAGCATGCATCGCAGCATCTGCGTTTGAGTCTT
CATTGCAGCGCGTACAAACTACTTTCAGCGCGTCTCACTACATCATGCAC
CTGCAACATGCTCAAGCCACAGTAAGCGCTTCAGGTGGGGAACCTGTGGT
GCTGGCGGCAGCTAAATTGATGTTTGTTAACAAGTATGAGCATAGGCAGT
ATGCGGCAGGCCGCCACGTGTCGTTTCGGTCAGATCGCGGTAGAACGAGG
ACGAAAAAAGTTTCAAAAAACACCTTTTTTTTTTTTTTAGTTTGTCATTT
GCAAAGCTTTTTGTTGGGATCGCCATAGAAGCTGACCGTCGAGCCATCGC
CAGTATTACGATGAGCATTCAAACGATCGCTCAGGTGGCCCCAGCATCGT
CGAGGCCAGTACCCGGATTCTCTGCTGCAGCTGAGAACCTCTCGCAATCC
TTGGGCGGGAGCATCTATGGCAGCACACCGGGAGGGACCAGGTTCCTGTA
CAAGTGAGTGCCTCGGTGATCATTGTGCAAGCCCGTCGCTGCTCTGCTGG
TCGAAGTTTCCTGCTGTGTCTGCGTACAAAGAAAGGCTGGTGAAACGGAA
ATCTGAGTTTCTTGTCTGGGTAGATAGCTCGTGTTGTTGCACGGCCAACT
GCGCGCCGCTGCTGATGCTTTGCTTCAGTTGCACTCTTTTGCGTTGGCGA
CGATCACAGGGTGCACAGCTGTGTCACAAGTAAGGATATGTTCCGCCGGA
AATACGAAACTTCGCATCGGTTTCAAATGTGGATCACTTACACACTCTCC
ACATCCTCGGTCGGCCAATGCATTTAAAGATGTTGCGACGATTGCCTCGT
GCCTCTCCAGCTCGCTTTCCATGTCAGCATTCAGGAAAGCACAGAAGCTG
TTCCGCGCACACCGAGGCTGAGACCACAAAACTGCACCTGTCTCTCGTTA
CACAGACAGTCTATGTCCCACCCCAGTCGATCTAGTCCCGCATTGCTTGA
TTTGACTGCAGCTTACAATCTGTTGGTAATCTGTTGGTCATTTTGTGCGT
TGGACCACGGGGCTCCCCGGGGTTGCTCTCCGTGCCGTCATCGCGTCCCC
CCCCTGTCCCCTTGCGTGCGCAGAGTGGAGGATATGTTGCAAATGCGCAA
CTCACCGCTATCACAGGCAAGCCATAATTTTCTGCATAGATACAAATGTG
GTCCAAATATCAGTGAATCGCCGTCGTTAACTCACAACAGTGTATTGCTG
ACTAGTAATTAGTCGTATTATCTAGGCAGCTTACTCCCTCAGAAGCATCA
TGGACAATTCTACCAACTCATGTGGTGCAGAGCAGTCACAGTGCCTTCGC
AAGCGATACCCTCCATGTTGCACGGGTGTGCAGCGTTTAATTCTTTGGGC
TGTCGCTCCTTTCCTCGGACATATGATGGTGCGTCACCGTCCCCTAACCC
TACTATTAGTAACACCAATCCTAGCCTTTGTCCGACAACTGCCCCCGCTT
ATGTGCGCGACTTTCTGGGCTATGTCCCTATGACAGGACACGTTACCTCA
ATCATAATGGCGGCGTCTGTGCCCCTATGACAGGACACGTTACCTCAATC
ATAATGGCGGCGTCTGTGCCTGTTTAAAGACAACACCAGTACGTGCTTGG
CAACATTACGAACGAACAGACGTGAAAGTTCAGCATTTGTGCCATTGAGA
GAAATGTGCAGCCATACCCTGCTTGAGCATAGCAAGCTTGAGCAGCGTGC
GCTTGCCTGCCATTGTCATCAAATACTCAACAGTGGCGCATGTCACCGAC
TGTGCACGCATTTTGGCCTCTGCATATGATAGGTACTTCTTTGTGAAGTA
CTTCGAAGTATGCATGTATGTATGGCGAGCTTGCTCAAATCATAATGAGA
TGTGCACCGAAAAGCGGGTGCCCTCGCAGTGTGGCAGTTACTGGGTGCAC
TCCGAAGGAGCGCGGCCCCATACTCGCCGTCATTCCTGTTCAATCACATA
GTACTCATTCAGAGGCGCACTGTGTTGCATGCGCAAACCGCTGCTGAACC
GTCAGCTGATCCAGCTCCAACTTCAACAGTGACAACAGCGTGCGCGCCAT
CTCTGACCGGTGCTGACACGGTGCCTCTTGCTGTGTGTCTCGTTGCTCAG
TCACCGCTGGTCTCCGGCGTGGCGCTGCCGCTAATTCCTGGCGTAACGGT
GGAGGCCGCAGCAAGGTATGTATTAGTTTCACTTCAAGTTCAAGTTTCAC
TTACTGCAATATTCAAAAATGTGTGCGGAAAAAATTTACTGTACCGTGCA
TGTCTTCATTTCTTTTTAAAACCAGCCATCGTTGTTTGGGGTCTGATGTC
ACAACATGTGATCGCAGCGGCTGACTGTCGCTTGCATGAGCTAAAGCACT
ATCTACTCAGTGGCCGAGGGGCGCAGTTGGACGATCATCTAGTCTCAATG
CCTGGCCGTCATAGCTAAAGAAGGAAGTCAAAAGCTAGTTGTCAGCAAAA
TTACCAACATCCAAAAGTGTGGCAAGAAAGGGGCGCACCACCTCTCATAT
TCACCAGCCGTGGGTGCTCTAATATTACCAGCTGCTCCGTAGAAAGGCAT
GTACCTATGCAGCTCGCACATAGCTGCGGCGGCACCATTTGCCGCGAAGG
AGACTCGAAGAGCATTGAGGTTCATATTGTCGCATAATGTTGGTATTATG
GAGTAAGCCATTTTTTGCACAGAGCATCTGGGTTAGGGCTAGGGTTAGGC
GGATGATGACGGCGGCTTGCAAGTGCGGGGGTGCTGGTGAAGGGTTAAGT
TACGGTTGGGGTTGGTGCCAAAGCGGCGGCAGCGGTGGTGGTGGCGGCAG
CAGCAGCGGCGGCGGCGGCAGTGGCAGCAGCGGCGGCGGCGGCACTGGCA
GCAGCGGCGGCGGCAGCAGCGGCGGTGTGGCGAAAGTGGCATCGATGAGA
AGACTTGGCAGATGGGCAGCGCGGGGGGAGGGGGGGCAGCAGCGCAGCGG
GTGTCTGCGGCAGATGCAGCATGCGCACATCGTAGATGGCACATCTGTCG
CTGCCGCAGTCGTTGAGCGTCCCTCACTCTAGCACTGTATCAAACGTGGG
GCAGATTAGTTGACGGTTCTGCGCATGCGCGCGAGACGTGTGTTGCGGAG
GCGTAGGCTATGCAGGCGGCTTTGGGGATGCAGCAGCGGCGGCGGCGGCA
GCAGCAGCAGCAGCAGCAGCAGCGCGCAACCGATGGCGACAGCGGACGGC
AGATGTTGAACTTTGTAGATATAGCGCTGACACCTTGTAATGCTGTTGAG
CCCAATCGTGGCAATCATGCACCAAGAGCATACGTGTTGTGCATATATGA
CGTGGTGCAGAATAGCGTTTCAGACCCCCAAGCGGAAGCTCATGGTCGTA
TCATTAGTGGAGGCACGCTGCTTCATGCCAGGTATGTGCTACCCGTTCAG
CGAGGATCAGCGGGGGGTGACAGCGCACGTGTTGGTGGCAGTGCTGGCGG
CGGCAGCGGCGGCGGCGGCGGAAGCAGTGGCAGCTGCACTGCGAGCGACA
GGTGGCGAAGATGGGAACCGATGCACACCGTTCACGTAATAGCCGCAACT
TTGAAGTTTCATTACGCACACTATCATGCCAATCACTTTCAACATGGCAT
GTTTTTTAAAACCTGCTGAAGTCGGCTTCACCTGTTGAGCACTGCGCTGC
CGACGGACCTGCAGGTTGGACGACGACTCAGGTGGCGACTCGGACGATGA
CTCAGACGGGGAGCGCGGCAGCGAAGCCGGCGGTGGCGGCGGCGGCGGCG
ATGCAGAGACAGATGGGAAGGCAAGCCCGGCGCGCGAGGCACGCGAGGCG
GGTGTCTTCAGCGAGAGCATGGAGCTCTGAGGCAGCAGTTACAACCGTTG
TAACTGCCGTAACTGTCAGCGAGGGGGCGCCGAGCTCTCAGGGCAGGAGC
TTTGGCCGTTGCAACTGTCAGACTACTACCTGTCGGAAAGTAACTGTCAG
AAGTAGCAGTCCACCCACTCCCCGGGGGGCTGTCCAATGTAGGTATGCAC
ACAGCTTACAGCGAGCGTTTTCGGTTGAGCAGCCTGATATAACCCCACCC
CCCCACACCTTTCCCTCGGGGTCGGGGGGGATGGCCGTGGCAGACAAACG
GCTGGTGTCGCAATTGGGGGGTGTCCCATACGGCAGCGTGTTGACGCGCC
GCCGCTGCTGCCGATGGGGCGTGGCTGAGCAGCTGATGACCGACGTGGGG
ATGCTCAGCAGCAGCAGCAGCAGCGCGCGACATGGCTCTTGCGTGATGCG
CGCGCGCGCACGCATACCGGCGCTTCTCACGGGGCACATCCCCTTACATA
GCTGTAAATACGTCGTCACAAAACAAAGAAAAATCAGAATATAATCATTA
CGACGGTTGGCGCGCGGAGCGGCC

Coding sequence (CDS) from alignment at Contig_121:403950..410873+

>mRNA_15612 ID=mRNA_15612|Name=jgi.p|Trimin1|352502|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=963bp|location=Sequence derived from alignment at Contig_121:403950..410873+ (Tribonema minus UTEX_B_3156 )
ATGGCAGACGACCCGATCTTCAGCGTCGCCCCAAATATCCTGGGCTTCCT
GCCTCCAGACGCTGCAAGCAGCGAGCATCTGGACGTCCTGCAGTGGGCGC
GCGCCAATGGCTGCCCCTGGGACGAGAACACGTGCACGTTCGCTGCAGCA
GACGGGCACCTTGCGGCTGTGCAGTGGGCGCGTGCCAACGGGTGCCTGTG
GGATACGTTCACGACCGCCAATGCTGCAGCAGGAGGGCACCTTGCGGTGC
TGCAGTGGGCGCATGCCAACGGGTGCCCCTGGGATGAGTGCACGTGCACA
CGTGCTGCCAGGGAGGGGCACCTGCAGGTCCTGCAGTGGGCGCGTGCCAA
CGGGTGTCCCTGGTCCGAGTGGACCTATGCTGCCAAGGACGGGCAGCTGG
AGGTGCTGCAATGGGCGCGCGCCAATGGGTGCCCCTGGGACGAGGAGACG
TGCAGCTGCGCGCGGCGGTTATCTGCCGATTTTGCAGACAACGGGCACCG
GCATGTGGTGAAGTGGGCACGTGCCAATGGATGCCCCGAGCCCATGCGCC
CCATGTATGGCAACAGCTCTAGCGAGGAGTACCAGACATCCGATGGCGGC
TCTTACGCGTCTGACGATAGCGACCAGGACTTCAGCGATGAGGACACGAG
CGATGATGGCATTGAGAGCTCCGACCAGGAAAGCGAGGGCTCTGCGGTGG
TGGTGGCGGCAGCAGCAGCGGCGGCGGCGGCAGTGGCAGCAGCGGCGGCG
GCGGCACTGGCAGCAGCGGCGGCGGCAGCAGCGGCGGTGTGGCGAAAGTT
GGACGACGACTCAGGTGGCGACTCGGACGATGACTCAGACGGGGAGCGCG
GCAGCGAAGCCGGCGGTGGCGGCGGCGGCGGCGATGCAGAGACAGATGGG
AAGGCAAGCCCGGCGCGCGAGGCACGCGAGGCGGGTGTCTTCAGCGAGAG
CATGGAGCTCTGA