mRNA_15539 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|8904
Unique NamemRNA_15539
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A835ZDH4_9STRA (Chitin-binding type-4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH4_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 6.260e-156
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
Query:   40 MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN 687
            MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN
Sbjct:    1 MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN 216          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A836CFM7_9STRA (Chitin-binding type-1 domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM7_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.440e-60
Identity = 102/187 (54.55%), Postives = 126/187 (67.38%), Query Frame = 1
Query:  100 HGYLITPKARSYGPSDA-FYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACP 657
            HGY+  P ARS G   A  Y    GNG G        PGICGDPFQG  ++NFAG  GPI+ATY+ G T+ V   LTANHGG+  +K+CP   +SATQSCF++  LKR DTG T+YW+ TG+Y  S   ++ Y+LPAGV+C+NGCLLQWEY AMQSC+  C  + CGP Y+ + NPITG  NM  CP
Sbjct:   38 HGYMQVPAARSLGNKGANAYCQQCGNGLGNRSGGTYPPGICGDPFQGT-SSNFAGGPGPIRATYSQGQTVDVQAILTANHGGRFRVKMCPDVSSSATQSCFDSNTLKRKDTGATDYWLLTGSYGDSPPYSMQYILPAGVACSNGCLLQWEYTAMQSCVVQCPQSECGP-YANRSNPITGSVNMNLCP 222          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A836CE35_9STRA (Chitin-binding type-4 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE35_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.870e-46
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  154 YDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQ------ATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENC 579
            Y    GNG G        PGICGDPFQG  ++NFAG  GPI+      ATY+ G T+ V   LTANHGG+  +K+CP   +SATQSCF++  LKR DTG T+YW+ TG+Y  S   ++ Y+LPAGV+C+NGCLLQWEY AMQSC+  C
Sbjct:    1 YCQQCGNGLGNRSGGTYPPGICGDPFQGT-SSNFAGGPGPIRGAYNKSATYSQGQTVDVQAILTANHGGRFRVKMCPDVSSSATQSCFDSNTLKRKDTGATDYWLLTGSYGDSPPYSMQYILPAGVACSNGCLLQWEYTAMQSCVVQC 147          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A7J7PXA6_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PXA6_9CHLO)

HSP 1 Score: 137 bits (346), Expect = 8.530e-34
Identity = 90/224 (40.18%), Postives = 127/224 (56.70%), Query Frame = 1
Query:   52 IAAGLLLLAQLAGVAAHGYLITPKARSY-GP--SDAFYDDMSGNGAGLNVVFNSN-PGICGDPFQGVPTTNF-AGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGS-AAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMV------ACPVAKGPEVTEN 687
            + A LL L   A V +HG L  P++R+   P     ++ D  GNG G  VV   N PG+CGDP+Q     +F + + G IQATY+ GATI V + +  NHGG+I +KLC +   +  Q+CF+ + L+R+D      +I  G   G+   ++ N+ LPAGVSCA GC+LQWEY+ M SC E C +A     Y+ + NP+TG  NM       +C  A  PE+  N
Sbjct:   17 LVAALLALLAPAPVYSHGSLTVPRSRNVVSPIQGQTWWKDH-GNGHGAQVVKPLNGPGVCGDPYQHYGDASFYSRSPGAIQATYSAGATINVQWWIQVNHGGRIGVKLC-NRRDNIDQACFDQFQLQRADGLGPFVYIMGGASMGTLGTMSANFRLPAGVSCAGGCVLQWEYLTMNSCFEPCPNAGACGVYANRQNPVTGQFNMANCCVGFSCSAADVPEIFRN 238          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383WL23_TETOB (Chitin-binding type-4 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WL23_TETOB)

HSP 1 Score: 128 bits (321), Expect = 1.420e-31
Identity = 79/189 (41.80%), Postives = 102/189 (53.97%), Query Frame = 1
Query:   55 AAGLLL-----LAQLAGVAAHGYLITPKARSY--GPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIE-NCASAVCG 597
            A GLLL      A  A V  HGYL+ P AR++       F+++ SGNG G         G+CGDPFQ    +NF     P+QATY  G+ I +   LT NHGGK   ++CP        +CF +  L R D G  +YWI    +  +A  T+ Y LPAG++C  GC+LQWEY +MQSCIE  C    CG
Sbjct:    3 ACGLLLGLVSLSASFAHVRGHGYLLQPAARNWVAHKQGRFWNEASGNGLGQGNT--QGLGVCGDPFQ-TTNSNFINEPSPVQATYKEGSVIELKVILTTNHGGKFSFRVCPRR-RDLDAACFGSNYLTRVDNGQRDYWI----FDIAAEHTMRYKLPAGITCEAGCVLQWEYYSMQSCIEPGCDRKYCG 183          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383VMG1_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VMG1_TETOB)

HSP 1 Score: 131 bits (330), Expect = 8.180e-31
Identity = 77/160 (48.12%), Postives = 95/160 (59.38%), Query Frame = 1
Query:  163 MSGNGAGLNVVFNSN-PGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIEN-CASAVCGPAYSTKYNPITGG 636
            MSGNG G     N+N PG+CGDPFQG   +NF     PIQATY  G  I ++  LTANHGGK   ++CP S +S  ++CF +  L R D G T+ WI     T     +L Y LPAG+SC  GC+LQW Y AMQSC+E  C    CG AY+   N + GG
Sbjct:    1 MSGNGLGFG---NTNGPGVCGDPFQGT-NSNFIMQPSPIQATYTQGGVIGLSVILTANHGGKFSFRVCPRS-SSLDEACFGSNFLTRVDNGQTDTWI----MTSQMDYSLTYQLPAGISCDGGCVLQWRYFAMQSCVERGCNPTYCG-AYAVGTNAVYGG 150          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A7J7QNS7_9CHLO (Glycoside hydrolase superfamily n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QNS7_9CHLO)

HSP 1 Score: 130 bits (326), Expect = 2.260e-30
Identity = 76/159 (47.80%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  163 MSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIEN-CASAVCGPAYSTKYNPITGG 636
            MSGNG GL+    S PG+CGDPFQG  +++F  A  PIQATY+ GA I +   LTAN GGK   ++CP S +S  ++CF T  L R D G  + WI     T     T+ Y LPAG+SC  GC+LQW Y AMQSC+E  C    CG  Y+   N + GG
Sbjct:    1 MSGNGLGLSGS-TSGPGVCGDPFQGT-SSSFVTAPSPIQATYSQGAVITLNAFLTANLGGKFSFRVCPRS-SSLDEACFGTNYLTRVDNGQRDTWI----MTPQMDYTMAYQLPAGISCEGGCVLQWRYFAMQSCVERGCDRTYCG-VYADGTNAVYGG 151          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A2V0PK48_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PK48_9CHLO)

HSP 1 Score: 127 bits (319), Expect = 1.080e-29
Identity = 88/213 (41.31%), Postives = 118/213 (55.40%), Query Frame = 1
Query:   67 LLLAQLAGVAAHGYLITPKARSY-----GPSDAFYDDMSGNGAGLNVVFN-SNPGICGDPFQGVPTTNFAGAIG--PIQ--ATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASA--TQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCA--SAVCGP--AYSTK-YNPITGGTNMVAC 654
            LL+A      AHG+L  P++R+      GP    Y+  SGNGAGL        PGICGDP+Q +   +    +   P+   A Y+ G  + + + LTANHGG I  KLCPS+P +A  TQ+CF+ YPL+R+D   T  +I   T   +   T  Y LPAGV C +GC+LQWEYV M SC   C   +A  GP  +Y+T+  NP  G T +  C
Sbjct:   11 LLVAAPPAAEAHGWLAVPESRNSRIQLTGPPGISYNRNSGNGAGLQSGPPIPQPGICGDPWQTITDRSLLTYVQDHPMDPNARYSPGQEVRLAWTLTANHGGYIAFKLCPSNPRAAQITQACFDQYPLQRADGLGTRTYIHVSTDNVNMGNT--YRLPAGVDCKDGCVLQWEYVTMNSCWVPCEVEAACAGPLGSYATRGSNPARGQTGLEEC 221          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383V6S1_TETOB (Chitin-binding type-4 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V6S1_TETOB)

HSP 1 Score: 112 bits (280), Expect = 8.270e-27
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  202 SNPGICGDPFQ-GVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGS-AAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVA 651
            + PG+CGDPF      T ++G  G  QATY  G  I V + +  NHGG+I +KLCP    S  Q+CF+   L+R+D      +I  GT   +   ++ ++ LPAGV+CA GC+LQWEY+ M SC E C +A CG  Y+ ++NP  GGT  +A
Sbjct:   26 NGPGVCGDPFLFSFNETFYSGTAGASQATYTPGQAINVQWWIQENHGGRIGVKLCPRRH-SLDQACFDQDQLQRADGLGPFVYIMNGTSKSTLGTMSADFRLPAGVACAGGCVLQWEYLTMNSCYEACDTAACG-VYADRHNP--GGTPALA 173          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A150G7L3_GONPE (Chitin-binding type-4 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7L3_GONPE)

HSP 1 Score: 109 bits (273), Expect = 3.440e-25
Identity = 75/212 (35.38%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   46 ASIAAGLL-LLAQLAGVAAHGYLITPKARSYGPS--DAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNT--YPLKRSDTGTTE----YWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAV------CGPAYSTKYNPITGG 636
            A++A G+L  +A L    AHGYL  P +R+Y       +Y    G G G        P +CG+PFQ  P  NF       +ATY  G  + VT  +T NHGG++ +++CP +    +QSCF+T  + ++R  T        YW       G   +T  + LPAGVSCA GC+LQW +VA Q C   C S        CG   +      TGG
Sbjct:   10 AALAVGVLSAMACLPSALAHGYLQDPVSRNYAARLIGEYYCHHCGQGGGQW----KQPDVCGNPFQDSPPINFTTRFYGFRATYTEGQDVNVTIGITTNHGGRMSLRVCPHARDQISQSCFDTPAHQMRRVHTNPQYNNKLYWYVRP---GDVNITQTFRLPAGVSCAGGCVLQWWWVAYQFCYMPCGSDADDVPGECGRNLNFPVGQCTGG 214          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDH4_9STRA6.260e-156100.00Chitin-binding type-4 domain-containing protein n=... [more]
A0A836CFM7_9STRA1.440e-6054.55Chitin-binding type-1 domain-containing protein n=... [more]
A0A836CE35_9STRA2.870e-4654.05Chitin-binding type-4 domain-containing protein (F... [more]
A0A7J7PXA6_9CHLO8.530e-3440.18Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A383WL23_TETOB1.420e-3141.80Chitin-binding type-4 domain-containing protein n=... [more]
A0A383VMG1_TETOB8.180e-3148.13Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7J7QNS7_9CHLO2.260e-3047.80Glycoside hydrolase superfamily n=1 Tax=Scenedesmu... [more]
A0A2V0PK48_9CHLO1.080e-2941.31Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A383V6S1_TETOB8.270e-2742.76Chitin-binding type-4 domain-containing protein n=... [more]
A0A150G7L3_GONPE3.440e-2535.38Chitin-binding type-4 domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_112contigContig_112:483028..485984 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|8904|CE8903_45
DescriptionLytic polysaccharide mono-oxygenase, cellulose-degrading
COG categoryS
Max annot lvl33208|Metazoa
EggNOG OGs28MU0@1|root,2QUC9@2759|Eukaryota,3AJRS@33154|Opisthokonta,3BR41@33208|Metazoa,3D7ZP@33213|Bilateria,41Z9H@6656|Arthropoda
Evalue6.5e-15
Seed ortholog6669.EFX75534
Hectar predicted targeting categorysignal peptide
TranscriptId9226
TrackFilteredModels1
ProteinId8904
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|8904gene_15539Tribonema minus UTEX_B_3156 geneContig_112 483028..485984 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15539_1exon_15539_1Tribonema minus UTEX_B_3156 exonContig_112 483028..483307 +
exon_15539_2exon_15539_2Tribonema minus UTEX_B_3156 exonContig_112 485399..485984 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_15539UTR5_15539Tribonema minus UTEX_B_3156 five_prime_UTRContig_112 483028..483066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15539CDS_15539Tribonema minus UTEX_B_3156 CDSContig_112 483067..483307 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_15539UTR3_15539Tribonema minus UTEX_B_3156 three_prime_UTRContig_112 485809..485984 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|8904Trimin1|8904|CE8903_45Tribonema minus UTEX_B_3156 polypeptideContig_112 483067..485808 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15539 ID=mRNA_15539|Name=jgi.p|Trimin1|8904|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=866bp|location=Sequence derived from alignment at Contig_112:483028..485984+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGCAGACAGCGCACAACACAACGGCAGCAGCTCTGCACCATGCACGCATC
TATCGCTGCTGGGTTGCTGCTACTGGCACAGCTGGCAGGCGTCGCGGCTC
ATGGATACCTCATCACCCCCAAAGCTCGCAGCTACGGCCCAAGTGATGCC
TTCTATGACGACATGTCTGGCAACGGTGCGGGGCTTAACGTGGTCTTCAA
CTCCAACCCCGGTATTTGCGGCGATCCCTTCCAGGGTGTGCCGACCACCA
ACTTTGCAGGGGCCATTGGACCAATCCAAGCAACCTACAACGTCGGAGCG
ACAATTCCTGTGACATTCCAGTTGACTGCCAACCACGGTGGCAAGATCGT
CATGAAGCTCTGCCCCAGTTCACCCGCCAGTGCGACTCAGTCCTGCTTCA
ACACGTACCCGCTCAAGCGCAGCGACACAGGCACAACAGAATACTGGATA
ACGACCGGCACGTACACGGGCTCCGCCGCCGTCACCCTCAATTACGTCCT
ACCCGCTGGCGTCAGCTGCGCAAATGGGTGCCTGTTGCAGTGGGAGTATG
TTGCCATGCAGAGCTGCATAGAGAACTGCGCGTCAGCAGTGTGTGGCCCC
GCCTACTCTACCAAGTACAACCCAATCACAGGGGGGACGAATATGGTGGC
GTGTCCAGTGGCTAAGGGTCCCGAGGTAACTGAAAATTAACTGTGAATAC
AGCAACTGTACCATTACTGTACGTGTGCATGTGCAACAAGAGAATGACAG
ATACCGCGCTATCCACACAGTTTAAGGCTGTTGACCGTCAAATTGAAGCC
TGCATGACCGCCAAAGACATGTCGTAGAAAATACGAACTTTAAAAAAAAT
GAAATTTAATTATTTA
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protein sequence of jgi.p|Trimin1|8904

>Trimin1|8904|CE8903_45 ID=Trimin1|8904|CE8903_45|Name=jgi.p|Trimin1|8904|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLN
VVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHG
GKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTL
NYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGT
NMVACPVAKGPEVTEN*
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mRNA from alignment at Contig_112:483028..485984+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15539 ID=mRNA_15539|Name=jgi.p|Trimin1|8904|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2957bp|location=Sequence derived from alignment at Contig_112:483028..485984+ (Tribonema minus UTEX_B_3156 )
TGCAGACAGCGCACAACACAACGGCAGCAGCTCTGCACCATGCACGCATC TATCGCTGCTGGGTTGCTGCTACTGGCACAGCTGGCAGGCGTCGCGGCTC ATGGATACCTCATCACCCCCAAAGCTCGCAGCTACGGCCCAAGTGATGCC TTCTATGACGACATGTCTGGCAACGGTGCGGGGCTTAACGTGGTCTTCAA CTCCAACCCCGGTATTTGCGGCGATCCCTTCCAGGGTGTGCCGACCACCA ACTTTGCAGGGGCCATTGGACCAATCCAAGGTGTGTGACTCAGTTCAACA AAATTAGTTCGGTTTACTACTGGTACTTATGATCTTGTATTTATAGCAGC CCCAAGGTGGGCTTGATGCGTTGGATAAGAATGCAAAAAACTAAAATCGG ACGGGCCCTTAGAGCCCTGCGTTGCAGGCTTGTACTAGACTCATGGGGGG CAGACACAGCGGCACCCAGTCTGAGCCACACCTATCGTAGCCGATGTCTC CATCTCTTGAGCGAAAACGCCGGAGGACCGCGGTTATGCCTCTAGTATAC ATTTGGGCCAGAGGCGCCCGGTCCTCGATTCCTTGCCTAAGCACGCCGCT GACGTGCCTGGCCGAGGTTCTCTTTCTTGCGTGTTCAAGCAAACGATCTA CAGTGTGCCCTGATGCTATCCGTATCCCCATGTTCCAATATCCCCTGCTG CTGCCCAAAGCCGTATCCTCACCACACGCGACTCCGCAGCTCCTGCTCAC AGCCAGCATCTCCCATCCCCTTGCTGCCTGATGCACCCTCGCCACCATCA GCGCCACCGCGAGTGCTGCCGCACCTCTCGGTGCTAACGAGCAGTTTGTA CAGTTACTGGTACTTGACTACTTGACTACTAGTGTTCAGTGCTTCAAACA TCAACATCAAGACATCAGGCTGGCATTGATTGACAAATTGCTGAAAATGT TCAATCTTGTAGTACATGACATTGTCATTGTCTTTGAGCCAGGCTGAGTC TGAGACTGTCATTGAGTGCCACTGGGTAATACTATCGCGACTCAGCTTAG TAAGCGTTTGATTGGAGTAATTTAAAATTCAATGTCTTGACGTAATGCTT TTTATTTTAACTACATTACTTGTTCATTTCATCAATATTGTCGTACAGGT CGAGATCAATATTGCCGTACACTGTCAGGTCAAAATACGTTGCATTGACC AATATTGTCGTACAGGTCAAAATGCGTTGCATCGACCACCTGGGCGCACA CATATGCAACACTCTGTATGACATCATGATCATGATGGTGCCACAGGCAC TGCAATGTACTGCAATTCTTAGATTACTAGACTAGTAGTACTTACTTTGA ATAGTACCTGACTTGAGTGTCCATAAATTCTGAACAGCCTGCAGGCCTGA GCTTCCACTTTCACAGTGACAGCTGCTCTCACTCGTTACGGTAGTCTGAA CTCCCGTTGGCAAATTAATTTCTGCGCGTTGCCAACTGTGATCCTGTGAC TTGCTGGGTTTTGGCACGGGCGCCGAAATCAAACAAAAAATAGTTTTCAA GCTGAACGATTCAGCTCTGAGTCAGCTGCTCTTGTTTTGCGAGTAGTTTT GCAAACCGCACCACCCTTGAAAAGGTCGCAAACTTGAGTGTATGGTGTGG CTGAGGTCACCTCGCGAGCAACCCTGATCTATTCAACACAAATTGCCCTT CGTTTTATTCTCTTTGAAAGAAACGTGTCGGTTCCAGCCAACTTTTGTTT TTGTTTGATTTTTGATGCACGTGCGACAACTTGTTGTTTATCATCTTGCA TTGTGACAGTGGTACAAAAAGTTATGTTCTTAATGCTTCGAATTCTTCAA TCAACAAGCACAATGATGCAGCAAATTTTAATTTAAAACCAAGTTTGCTT TGTAGGAACACTGCCAGTATTCCCGAAGCCATTTGCCCTTTGCACTTGAA TGTTAACTTCAATTGTGAACTTTTGCTGAGCAAATTATCAACTCTGAGTC ATTGAAGTTCAAAGCCTTCGAAGGTTCTGAGCCTCGGAGTGCTCCGTGGT CATCATGGACATCTCATCAACTTTAGAACTGTTACAGTGCCTTCGTTACT CAACATCTGATTCATTATAATAAATGAAGACCGTGAAACTTTAATGCAGC ATGAAACACGATGACTGCCAAGTGGCAGATCTAACCAGTCTGAGACTACA ATTTGACCTTAAAGTTTGCCAACGTGGTTCAATGAAGGTCCAGGACCTGC ATATCGAATTCAGGTCCTGTTTTTTATTCAGGTCCTGTTTTTAAATTTAT GTAGTTCAAACAACCTTAAAGTGACCTTTGCTGCTGCAATCATCTGCAAT TCTGTCACGGTCTCCTCACAGCAACCTACAACGTCGGAGCGACAATTCCT GTGACATTCCAGTTGACTGCCAACCACGGTGGCAAGATCGTCATGAAGCT CTGCCCCAGTTCACCCGCCAGTGCGACTCAGTCCTGCTTCAACACGTACC CGCTCAAGCGCAGCGACACAGGCACAACAGAATACTGGATAACGACCGGC ACGTACACGGGCTCCGCCGCCGTCACCCTCAATTACGTCCTACCCGCTGG CGTCAGCTGCGCAAATGGGTGCCTGTTGCAGTGGGAGTATGTTGCCATGC AGAGCTGCATAGAGAACTGCGCGTCAGCAGTGTGTGGCCCCGCCTACTCT ACCAAGTACAACCCAATCACAGGGGGGACGAATATGGTGGCGTGTCCAGT GGCTAAGGGTCCCGAGGTAACTGAAAATTAACTGTGAATACAGCAACTGT ACCATTACTGTACGTGTGCATGTGCAACAAGAGAATGACAGATACCGCGC TATCCACACAGTTTAAGGCTGTTGACCGTCAAATTGAAGCCTGCATGACC GCCAAAGACATGTCGTAGAAAATACGAACTTTAAAAAAAATGAAATTTAA TTATTTA
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Coding sequence (CDS) from alignment at Contig_112:483028..485984+

>mRNA_15539 ID=mRNA_15539|Name=jgi.p|Trimin1|8904|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_112:483028..485984+ (Tribonema minus UTEX_B_3156 )
ATGCACGCATCTATCGCTGCTGGGTTGCTGCTACTGGCACAGCTGGCAGG
CGTCGCGGCTCATGGATACCTCATCACCCCCAAAGCTCGCAGCTACGGCC
CAAGTGATGCCTTCTATGACGACATGTCTGGCAACGGTGCGGGGCTTAAC
GTGGTCTTCAACTCCAACCCCGGTATTTGCGGCGATCCCTTCCAGGGTGT
GCCGACCACCAACTTTGCAGGGGCCATTGGACCAATCCAAGCAACCTACA
ACGTCGGAGCGACAATTCCTGTGACATTCCAGTTGACTGCCAACCACGGT
GGCAAGATCGTCATGAAGCTCTGCCCCAGTTCACCCGCCAGTGCGACTCA
GTCCTGCTTCAACACGTACCCGCTCAAGCGCAGCGACACAGGCACAACAG
AATACTGGATAACGACCGGCACGTACACGGGCTCCGCCGCCGTCACCCTC
AATTACGTCCTACCCGCTGGCGTCAGCTGCGCAAATGGGTGCCTGTTGCA
GTGGGAGTATGTTGCCATGCAGAGCTGCATAGAGAACTGCGCGTCAGCAG
TGTGTGGCCCCGCCTACTCTACCAAGTACAACCCAATCACAGGGGGGACG
AATATGGTGGCGTGTCCAGTGGCTAAGGGTCCCGAGGTAACTGAAAATTA
A
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