Trimin1|8904|CE8903_45 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|8904
Unique NameTrimin1|8904|CE8903_45
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length217
Homology
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A835ZDH4_9STRA (Chitin-binding type-4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH4_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 2.100e-156
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query:    1 MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN 216
            MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN
Sbjct:    1 MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACPVAKGPEVTEN 216          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A836CFM7_9STRA (Chitin-binding type-1 domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM7_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.730e-61
Identity = 102/187 (54.55%), Postives = 126/187 (67.38%), Query Frame = 0
Query:   21 HGYLITPKARSYGPSDA-FYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVACP 206
            HGY+  P ARS G   A  Y    GNG G        PGICGDPFQG  ++NFAG  GPI+ATY+ G T+ V   LTANHGG+  +K+CP   +SATQSCF++  LKR DTG T+YW+ TG+Y  S   ++ Y+LPAGV+C+NGCLLQWEY AMQSC+  C  + CGP Y+ + NPITG  NM  CP
Sbjct:   38 HGYMQVPAARSLGNKGANAYCQQCGNGLGNRSGGTYPPGICGDPFQGT-SSNFAGGPGPIRATYSQGQTVDVQAILTANHGGRFRVKMCPDVSSSATQSCFDSNTLKRKDTGATDYWLLTGSYGDSPPYSMQYILPAGVACSNGCLLQWEYTAMQSCVVQCPQSECGP-YANRSNPITGSVNMNLCP 222          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A836CE35_9STRA (Chitin-binding type-4 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE35_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.960e-47
Identity = 80/148 (54.05%), Postives = 100/148 (67.57%), Query Frame = 0
Query:   39 YDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQ------ATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENC 180
            Y    GNG G        PGICGDPFQG  ++NFAG  GPI+      ATY+ G T+ V   LTANHGG+  +K+CP   +SATQSCF++  LKR DTG T+YW+ TG+Y  S   ++ Y+LPAGV+C+NGCLLQWEY AMQSC+  C
Sbjct:    1 YCQQCGNGLGNRSGGTYPPGICGDPFQGT-SSNFAGGPGPIRGAYNKSATYSQGQTVDVQAILTANHGGRFRVKMCPDVSSSATQSCFDSNTLKRKDTGATDYWLLTGSYGDSPPYSMQYILPAGVACSNGCLLQWEYTAMQSCVVQC 147          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A7J7PXA6_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PXA6_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 5.350e-34
Identity = 90/222 (40.54%), Postives = 126/222 (56.76%), Query Frame = 0
Query:    7 AGLLLLAQLAGVAAHGYLITPKARSY-GP--SDAFYDDMSGNGAGLNVVFNSN-PGICGDPFQGVPTTNF-AGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGS-AAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMV------ACPVAKGPEVTEN 216
            A LL L   A V +HG L  P++R+   P     ++ D  GNG G  VV   N PG+CGDP+Q     +F + + G IQATY+ GATI V + +  NHGG+I +KLC +   +  Q+CF+ + L+R+D      +I  G   G+   ++ N+ LPAGVSCA GC+LQWEY+ M SC E C +A     Y+ + NP+TG  NM       +C  A  PE+  N
Sbjct:   19 AALLALLAPAPVYSHGSLTVPRSRNVVSPIQGQTWWKDH-GNGHGAQVVKPLNGPGVCGDPYQHYGDASFYSRSPGAIQATYSAGATINVQWWIQVNHGGRIGVKLC-NRRDNIDQACFDQFQLQRADGLGPFVYIMGGASMGTLGTMSANFRLPAGVSCAGGCVLQWEYLTMNSCFEPCPNAGACGVYANRQNPVTGQFNMANCCVGFSCSAADVPEIFRN 238          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383WL23_TETOB (Chitin-binding type-4 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WL23_TETOB)

HSP 1 Score: 128 bits (321), Expect = 1.850e-32
Identity = 75/179 (41.90%), Postives = 98/179 (54.75%), Query Frame = 0
Query:   11 LLAQLAGVAAHGYLITPKARSY--GPSDAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIE-NCASAVCG 186
            L A  A V  HGYL+ P AR++       F+++ SGNG G         G+CGDPFQ    +NF     P+QATY  G+ I +   LT NHGGK   ++CP        +CF +  L R D G  +YWI    +  +A  T+ Y LPAG++C  GC+LQWEY +MQSCIE  C    CG
Sbjct:   13 LSASFAHVRGHGYLLQPAARNWVAHKQGRFWNEASGNGLGQGNT--QGLGVCGDPFQ-TTNSNFINEPSPVQATYKEGSVIELKVILTTNHGGKFSFRVCPRR-RDLDAACFGSNYLTRVDNGQRDYWI----FDIAAEHTMRYKLPAGITCEAGCVLQWEYYSMQSCIEPGCDRKYCG 183          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383VMG1_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VMG1_TETOB)

HSP 1 Score: 131 bits (330), Expect = 1.010e-31
Identity = 77/160 (48.12%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   42 MSGNGAGLNVVFNSN-PGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIEN-CASAVCGPAYSTKYNPITGG 199
            MSGNG G     N+N PG+CGDPFQG   +NF     PIQATY  G  I ++  LTANHGGK   ++CP S +S  ++CF +  L R D G T+ WI     T     +L Y LPAG+SC  GC+LQW Y AMQSC+E  C    CG AY+   N + GG
Sbjct:    1 MSGNGLGFG---NTNGPGVCGDPFQGT-NSNFIMQPSPIQATYTQGGVIGLSVILTANHGGKFSFRVCPRS-SSLDEACFGSNFLTRVDNGQTDTWI----MTSQMDYSLTYQLPAGISCDGGCVLQWRYFAMQSCVERGCNPTYCG-AYAVGTNAVYGG 150          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A7J7QNS7_9CHLO (Glycoside hydrolase superfamily n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QNS7_9CHLO)

HSP 1 Score: 130 bits (326), Expect = 2.850e-31
Identity = 76/159 (47.80%), Postives = 95/159 (59.75%), Query Frame = 0
Query:   42 MSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIEN-CASAVCGPAYSTKYNPITGG 199
            MSGNG GL+    S PG+CGDPFQG  +++F  A  PIQATY+ GA I +   LTAN GGK   ++CP S +S  ++CF T  L R D G  + WI     T     T+ Y LPAG+SC  GC+LQW Y AMQSC+E  C    CG  Y+   N + GG
Sbjct:    1 MSGNGLGLSGS-TSGPGVCGDPFQGT-SSSFVTAPSPIQATYSQGAVITLNAFLTANLGGKFSFRVCPRS-SSLDEACFGTNYLTRVDNGQRDTWI----MTPQMDYTMAYQLPAGISCEGGCVLQWRYFAMQSCVERGCDRTYCG-VYADGTNAVYGG 151          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A2V0PK48_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PK48_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 1.940e-30
Identity = 88/213 (41.31%), Postives = 118/213 (55.40%), Query Frame = 0
Query:   10 LLLAQLAGVAAHGYLITPKARSY-----GPSDAFYDDMSGNGAGLNVVFN-SNPGICGDPFQGVPTTNFAGAIG--PIQ--ATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASA--TQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCA--SAVCGP--AYSTK-YNPITGGTNMVAC 205
            LL+A      AHG+L  P++R+      GP    Y+  SGNGAGL        PGICGDP+Q +   +    +   P+   A Y+ G  + + + LTANHGG I  KLCPS+P +A  TQ+CF+ YPL+R+D   T  +I   T   +   T  Y LPAGV C +GC+LQWEYV M SC   C   +A  GP  +Y+T+  NP  G T +  C
Sbjct:   11 LLVAAPPAAEAHGWLAVPESRNSRIQLTGPPGISYNRNSGNGAGLQSGPPIPQPGICGDPWQTITDRSLLTYVQDHPMDPNARYSPGQEVRLAWTLTANHGGYIAFKLCPSNPRAAQITQACFDQYPLQRADGLGTRTYIHVSTDNVNMGNT--YRLPAGVDCKDGCVLQWEYVTMNSCWVPCEVEAACAGPLGSYATRGSNPARGQTGLEEC 221          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A383V6S1_TETOB (Chitin-binding type-4 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V6S1_TETOB)

HSP 1 Score: 112 bits (280), Expect = 1.280e-27
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   55 SNPGICGDPFQ-GVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGS-AAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGTNMVA 204
            + PG+CGDPF      T ++G  G  QATY  G  I V + +  NHGG+I +KLCP    S  Q+CF+   L+R+D      +I  GT   +   ++ ++ LPAGV+CA GC+LQWEY+ M SC E C +A CG  Y+ ++NP  GGT  +A
Sbjct:   26 NGPGVCGDPFLFSFNETFYSGTAGASQATYTPGQAINVQWWIQENHGGRIGVKLCPRRH-SLDQACFDQDQLQRADGLGPFVYIMNGTSKSTLGTMSADFRLPAGVACAGGCVLQWEYLTMNSCYEACDTAACG-VYADRHNP--GGTPALA 173          
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Match: A0A150G7L3_GONPE (Chitin-binding type-4 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7L3_GONPE)

HSP 1 Score: 108 bits (270), Expect = 1.520e-25
Identity = 75/212 (35.38%), Postives = 103/212 (48.58%), Query Frame = 0
Query:    3 ASIAAGLL-LLAQLAGVAAHGYLITPKARSYGPS--DAFYDDMSGNGAGLNVVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHGGKIVMKLCPSSPASATQSCFNT--YPLKRSDTGTTE----YWITTGTYTGSAAVTLNYVLPAGVSCANGCLLQWEYVAMQSCIENCASAV------CGPAYSTKYNPITGG 199
            A++A G+L  +A L    AHGYL  P +R+Y       +Y    G G G        P +CG+PFQ  P  NF       +ATY  G  + VT  +T NHGG++ +++CP +    +QSCF+T  + ++R  T        YW       G   +T  + LPAGVSCA GC+LQW +VA Q C   C S        CG   +      TGG
Sbjct:   10 AALAVGVLSAMACLPSALAHGYLQDPVSRNYAARLIGEYYCHHCGQGGGQW----KQPDVCGNPFQDSPPINFTTRFYGFRATYTEGQDVNVTIGITTNHGGRMSLRVCPHARDQISQSCFDTPAHQMRRVHTNPQYNNKLYWYVRP---GDVNITQTFRLPAGVSCAGGCVLQWWWVAYQFCYMPCGSDADDVPGECGRNLNFPVGQCTGG 214          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|8904 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDH4_9STRA2.100e-156100.00Chitin-binding type-4 domain-containing protein n=... [more]
A0A836CFM7_9STRA1.730e-6154.55Chitin-binding type-1 domain-containing protein n=... [more]
A0A836CE35_9STRA2.960e-4754.05Chitin-binding type-4 domain-containing protein (F... [more]
A0A7J7PXA6_9CHLO5.350e-3440.54Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A383WL23_TETOB1.850e-3241.90Chitin-binding type-4 domain-containing protein n=... [more]
A0A383VMG1_TETOB1.010e-3148.13Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7J7QNS7_9CHLO2.850e-3147.80Glycoside hydrolase superfamily n=1 Tax=Scenedesmu... [more]
A0A2V0PK48_9CHLO1.940e-3041.31Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A383V6S1_TETOB1.280e-2742.76Chitin-binding type-4 domain-containing protein n=... [more]
A0A150G7L3_GONPE1.520e-2535.38Chitin-binding type-4 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004302Cellulose/chitin-binding protein, N-terminalPFAMPF03067LPMO_10coord: 21..181
e-value: 2.7E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR21113:SF6AGAP000266-PAcoord: 9..188
NoneNo IPR availablePANTHERPTHR21113AGAP001705-PAcoord: 9..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_112contigContig_112:483067..485808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|8904mRNA_15539Tribonema minus UTEX_B_3156 mRNAContig_112 483028..485984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|8904|CE8903_45 ID=Trimin1|8904|CE8903_45|Name=jgi.p|Trimin1|8904|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
MHASIAAGLLLLAQLAGVAAHGYLITPKARSYGPSDAFYDDMSGNGAGLN
VVFNSNPGICGDPFQGVPTTNFAGAIGPIQATYNVGATIPVTFQLTANHG
GKIVMKLCPSSPASATQSCFNTYPLKRSDTGTTEYWITTGTYTGSAAVTL
NYVLPAGVSCANGCLLQWEYVAMQSCIENCASAVCGPAYSTKYNPITGGT
NMVACPVAKGPEVTEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004302Cellulose/chitin-bd_N