mRNA_15490 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A835Z5B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B8_9STRA) HSP 1 Score: 1242 bits (3214), Expect = 0.000e+0 Identity = 747/747 (100.00%), Postives = 747/747 (100.00%), Query Frame = 1 Query: 1 MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM 2241 MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM Sbjct: 1 MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM 747
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 157 bits (398), Expect = 5.400e-37 Identity = 169/593 (28.50%), Postives = 226/593 (38.11%), Query Frame = 1 Query: 139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNAST---LALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYT------HAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLS---DKWLGTFYESMM-----GKG--------TLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAA-YKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDN--DAGTVAWFMLTSANMSTTAWGQL-QANGALSIKSYEMGVLFLPSRLRAPDA----------TAGFSVDPG 1800 A+L NY D +V PRL S PV V G T + LR P V L LP YGT+H+KMIIL+F TG+RV V TANF D KS+GVW+Q+FP +GS A ++ GG PA+ F++TL +Y DF A ALVP+ PG+G N H G ++G +R RAL +RE ++CQ SS SL+ ++WL S M GK + D+A+ L +++VWP+V AVRT GW AG SI + N+ YK + + R+ P +LR P L +W G P R R PHIKSY RY A G N GT+ D VAWF+LTS+N+S +AWG L +A+ L+++S+EMGV+FLPS LR+P +GF+ PG Sbjct: 112 ALLCNYMVDYALLVRCAPRLGS-VPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSC----AFQEDLMGFLFKVGG--------------------------PASAFASTLGEY------------------------------------------------------DFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHK-----------------------------------VLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELR----PLLRKWKGNPAVNRTRDAPHIKSYLRYREVA-------------------------GEN-----------------------GTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPG 532
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: TYDP1_ARATH (Tyrosyl-DNA phosphodiesterase 1 n=7 Tax=Camelineae TaxID=980083 RepID=TYDP1_ARATH) HSP 1 Score: 125 bits (313), Expect = 3.440e-26 Identity = 143/557 (25.67%), Postives = 201/557 (36.09%), Query Frame = 1 Query: 139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRR------TAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARAL-----FSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHR-WAG--APRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLR 1761 A+L NY D++W++ CP+L + V+ + G+ + + LH RLP +GTHHSK I L + GVRVVV TAN DW+ KS+G+W Q+FP W + PP F L+DYL TA L + + AA ++ D++ A L+ + PG H G ++G ++ R + F RE R ++ Q SS GSL +KWL F S+ T D+ P GD I+WPTV VR L G++AGN+IP+ P +++ PFL + WA A R RAMPHIK++ RY ND +AWF+LTS+N+S AWG LQ N + L I+SYE+GVLFLPS ++ Sbjct: 174 AILSNYMVDIDWLMSACPKLANIPQVMVIHGEGDGRQEYIQRKKPANWI-LHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFP---------------------------------WKDDDKD----------PPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNV---------------------------KINAAFFKKF----DYSDATVRLIASVPGY-----HTGFNLNKWGHMKLRTILQECIFDRE---------------------------------------------FRRSPLIYQFSSLGSLDEKWLAEFGNSLSSGITEDKTPLGP--GDSLIIWPTVEDVRCSLEGYAAGNAIPS---------------------PLKNVEK---PFLKKYWARWKADHSARGRAMPHIKTFTRY----------------------------------------------------------NDQ-KIAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPSPIK 520
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: UPI00053A8B45 (tyrosyl-DNA phosphodiesterase 1-like isoform X1 n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A8B45) HSP 1 Score: 123 bits (308), Expect = 2.070e-25 Identity = 144/553 (26.04%), Postives = 205/553 (37.07%), Query Frame = 1 Query: 139 AMLFNYTWDMEWMVGECPRL--LSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARAL-----FSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHR-WAG--APRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLR 1761 A+L NY D++W++ CP+L +S V+ GD R + +LH RLP +GTHHSK I L + GVRVVV TAN DW+ KS+G+W Q+FP W + PP F L+DYL + + + T +LP R + + D++ A L+ + PG H G ++G ++ R++ F RE R +V Q SS GSL +KWL F +S+ T D+ P GD I+WPTV VR L G++AGN+IP+ P +++ PFL + WA A R+RAMPHIK++ RY +D +AWF+LTS+N+S AWG LQ N + L I+SYE+GVLFL S ++ Sbjct: 244 AILSNYMVDVDWLMSACPKLANISQVMVIHGEGDGRQEYIQRKKPANW---SLHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFP---------------------------------WKDDD---------NKDPPKCCGFEGDLIDYLN----VLKWPEFTA-------------------SLPG--RGNVKINAAFFKKFDYSNATVRLIASVPGY-----HTGLNLKKWGHMKLRSILQECIFDRE---------------------------------------------FRRSPLVYQFSSLGSLDEKWLAEFRDSLSCGITEDKTPLGP--GDPLIIWPTVEDVRCSLEGYAAGNAIPS---------------------PLKNVEK---PFLRKYWAKWKADHSARSRAMPHIKTFTRY--------------------------------------------------------SDQK---LAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLSSPIK 591
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A7R9L5N0_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9L5N0_9ACAR) HSP 1 Score: 114 bits (286), Expect = 5.570e-23 Identity = 134/549 (24.41%), Postives = 198/549 (36.07%), Query Frame = 1 Query: 139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTG---DNASTLALRHAAQAFPHVALHGLRLPP-YGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQE-FPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAV-RTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSL---SDKWLGTFYESMMGK--GTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLP 1749 ++ NY ++M+W++ + P+ P++ V G D +T ++ + +P++ L G L +GTHHSKM++L ++ G+RVV+ TAN +DW QK++GVW FP +P+ H A F L++YL+ + + R D +AA LV + PG H GA + RFG L+ R L S E P+A + Q SS GSL +DKWL + S + G P L K+++P+V VRTCL G+S G S+P S + T + + +LH W R GR+ A PHIK+Y R D +A+F+LTSAN+S AWGQL+ N L+IKSYE+GVLF+P Sbjct: 137 SLQMNYMFEMDWLLEQYPKQFRSLPMLVVYGSKRDGTATREMQSQTKPYPNIRLFGAHLVDMFGTHHSKMMLLRYDNGIRVVIHTANLIERDWFQKTQGVWISPLFPPLPS----------------------------------------THTSDADISQTRFKTDLIEYLKSYTSIEINEWIQTIR-----------------------------------RHDLSAAKVFLVGSVPGR-----HVGADNKCRFGHLKLRRLLS-EFGPSAKNVDSSWPA-------------------------------------IGQFSSIGSLGPTADKWLTNEFLSTLSAVCGVKSLVTKPRL----KLIFPSVENVRTCLEGYSGGGSLPYS-------------------SQTHRKQTYLTSYLHSWRSE-RTGRSIACPHIKTYTRL---------------------------------------------------------SGDNKQMAYFVLTSANLSKAAWGQLEKNDTQLAIKSYEIGVLFIP 486
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 114 bits (285), Expect = 2.490e-22 Identity = 144/592 (24.32%), Postives = 205/592 (34.63%), Query Frame = 1 Query: 142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAG--------------------------GCGRPPRGWHLESAIMRHEPHCRAAPPPANDFS-ATLVDYLRRTAGLTRHS-----------------------DATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPL---PAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWL-GTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLP 1749 +L NY +D+ W+ ECPRL + PVV V G+ A++H + F +V RLP YGTHH+KM+++ + T VRV + TANF DW+ K++GVW+Q+F L G R+ A G C PR + ++ E A F+ T V A T H+ D D RA +E VDF + + GA F + R FS + P+ G ++CQ SS GSL +KWL G F ES+M + L + P++ + IVWP+V VR + GW AG ++P P ++++ + +L +W R AMPHIK+Y R+ + G V W +LTS+N+S AWG LQ NG L I+SYE+GVLFLP Sbjct: 520 LLTNYMYDLAWLFNECPRL-ADVPVVLVHGERDRE-AMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAVYAVGLSDLLSGEFSRVLLTNYMYDLAWLFNEC---PRLADVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYL----------STLGAPVVAFCRELERFDFSTATVALVPSVPGYHTGAAKDKYGHLRVRRILQHFNVPRSDHP-------------LICQFSSLGSLDEKWLFGEFAESLMPR-PLPTSTPMPIKS-LHIVWPSVDDVRNSIEGWHAGRAVPC---------------------PLKNMKPFLHKYLRKWTPPAALHRQNAMPHIKTYARF--------------------------------------------------------DPSQPGAVDWALLTSSNLSKAAWGALQKNGTQLMIRSYELGVLFLP 1004
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A383VVN0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VVN0_TETOB) HSP 1 Score: 112 bits (279), Expect = 1.170e-21 Identity = 199/791 (25.16%), Postives = 277/791 (35.02%), Query Frame = 1 Query: 142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGD---NASTLALRHAAQAF--PHVALHGLRLP-PYGTHHSKMIILEFETG-VRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLR--RTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWL----------GTFYES---------------------------------------------MMGKGTLDQARGPPLRGD-----MKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLH----RWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEV-------------GLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRS--GLD----TMGRTWESYFGN 2235 ++ N+ DM W++ CP + + V+ V G+ +A+ ++ + AA P A H LP YGTHHSK +L + G +R++V TAN D + K++G+W+Q+FP AG+A +A+ ++F + L DYL + GL A L A DF+AA AAL+P+ PG HAG+ +G LR RAL + LPA + QCSS GS+ +KWL G++Y + A G +RG +++VW T A V+ GW+ G SIP N++ PFL RW G P GR AMPHIK+Y RY P +XXXXXXXXXXXXXXXXXX +G +AW ++ S N+S AWG LQ G+ L ++SYE+GVL P LE RA PHR C+H AA AA ++ A+ + + GL + +V G+P+ LLP+PY L P Y + G+ PWC PR G+D T G T Y+GN Sbjct: 382 VVSNFMVDMGWLLSACPAIATADKVLVVHGERGAHAAAISEQAAAAGLTSPRFAAHAPPLPITYGTHHSKAFLLGYRHGGLRLIVHTANMIYPDCNNKTQGLWYQDFPPKAAGAA------------------------------AAV--------------SEFESCLSDYLAALKLPGLWAGDVAW-----------------------------------LVAAADFSAARAALLPSVPGY-----HAGSKLHAYGHLRLRALLAASRLPAR----------------------------------------FQPAPCLLQCSSLGSIDEKWLRQEMVASMTAGSYYSEGDDLSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFARMRQAAAAGSAMRGGDPTLPLQLVWTTAAEVQHSREGWAGGGSIPGRHDNVMR------------------------PFLQWHYCRWGGEPA-GRQSAMPHIKTYTRYLPPGSXXXXXXXXXXXXXXXXXXQHGVAGAG------------------------------AELAWCIIASHNLSKAAWGSLQKGGSQLMVRSYELGVLLTPE------------------LEAAYRA-----------------HPHRHYS--------------------CTHETPGAAAAAAGSNVGSASKPPVRF---YAWTGLQQQQQQVADTATQPSSSSRSGVPV-LLPLPYLLPPKQY--QQGEVPWCVDPPRPFPGVDAFGYTCGNTPLRYYGN 932
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: K3WH37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH37_GLOUD) HSP 1 Score: 99.0 bits (245), Expect = 4.590e-18 Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPL 447 +L NY +DM W+ GECPRL PV+ V G+ LA+ + + + +V+L LP PYGTHH+KM+++ + T VRV + TANF A DW+ K++GVW+Q+F L Sbjct: 78 LLTNYMFDMPWLFGECPRL-HDVPVLLVHGER-DRLAMANECKGYTNVSLVAPYLPIPYGTHHTKMMVVVYPTKVRVAIFTANFIAIDWNNKTQGVWFQDFEL 178
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A443SPP2_9ACAR (Tyrosyl-DNA phosphodiesterase 1-like protein n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SPP2_9ACAR) HSP 1 Score: 95.5 bits (236), Expect = 7.090e-17 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 148 FNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLA-LRHAAQAFPHVALHGLRL-PPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVP 453 FNY +D++W+V + P G P+ V D T+A L Q++P++ L L P+GTHH+KM+IL +E G+RVV+ TAN +DWDQK++GVW+ PL P Sbjct: 108 FNYMFDIDWLVDKYPSEFQGLPLFIVHQDKLETVAQLEQEVQSYPNIKLVRAHLMDPFGTHHTKMMILHYENGLRVVIHTANLIERDWDQKTQGVWFS--PLFP 209
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A6G0X136_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X136_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.430e-16 Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFP 444 A+L NY D++W+ + RL APV+ V G + ++++ A + F +V + LP PYGTHH+KM+IL F+T VRV + TANF A DW+ K++GVW QEFP Sbjct: 48 AILTNYKVDVDWLFAQSARL-QVAPVLLVHGSSPASMS--EACRQFKNVTVIAPPLPIPYGTHHTKMMILFFDTFVRVAIFTANFVAGDWESKTQGVWMQEFP 147 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2244bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCATGAAGCCCTCTGCAGTGTCGGGATCCGCTCTAGCAGCTGTGGAback to top protein sequence of jgi.p|Trimin1|353815 >Trimin1|353815|estExt_Genemark1.C_Ctg_1850036 ID=Trimin1|353815|estExt_Genemark1.C_Ctg_1850036|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=748bp MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFback to top mRNA from alignment at Contig_185:231631..238181- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6551bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_185:231631..238181- >mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2244bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )back to top |