mRNA_15490 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353815
Unique NamemRNA_15490
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A835Z5B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B8_9STRA)

HSP 1 Score: 1242 bits (3214), Expect = 0.000e+0
Identity = 747/747 (100.00%), Postives = 747/747 (100.00%), Query Frame = 1
Query:    1 MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM 2241
            MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM
Sbjct:    1 MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM 747          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 5.400e-37
Identity = 169/593 (28.50%), Postives = 226/593 (38.11%), Query Frame = 1
Query:  139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNAST---LALRHAAQAFPHVALHGLRLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYT------HAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLS---DKWLGTFYESMM-----GKG--------TLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAA-YKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDN--DAGTVAWFMLTSANMSTTAWGQL-QANGALSIKSYEMGVLFLPSRLRAPDA----------TAGFSVDPG 1800
            A+L NY  D   +V   PRL S  PV  V G    T   + LR      P V L    LP YGT+H+KMIIL+F TG+RV V TANF   D   KS+GVW+Q+FP   +GS     A ++         GG                          PA+ F++TL +Y                                                      DF  A  ALVP+ PG+G N        H G    ++G +R RAL +RE                                                  ++CQ SS  SL+   ++WL     S M     GK         + D+A+   L   +++VWP+V AVRT   GW AG SI  +  N+    YK   + + R+  P  +LR    P L +W G P   R R  PHIKSY RY   A                         G N                       GT+   D   VAWF+LTS+N+S +AWG L +A+  L+++S+EMGV+FLPS LR+P             +GF+  PG
Sbjct:  112 ALLCNYMVDYALLVRCAPRLGS-VPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFPKRTSGSC----AFQEDLMGFLFKVGG--------------------------PASAFASTLGEY------------------------------------------------------DFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHK-----------------------------------VLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELR----PLLRKWKGNPAVNRTRDAPHIKSYLRYREVA-------------------------GEN-----------------------GTETRVDGDEVAWFLLTSSNLSRSAWGYLNKASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASGFTCTPG 532          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: TYDP1_ARATH (Tyrosyl-DNA phosphodiesterase 1 n=7 Tax=Camelineae TaxID=980083 RepID=TYDP1_ARATH)

HSP 1 Score: 125 bits (313), Expect = 3.440e-26
Identity = 143/557 (25.67%), Postives = 201/557 (36.09%), Query Frame = 1
Query:  139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRR------TAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARAL-----FSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHR-WAG--APRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLR 1761
            A+L NY  D++W++  CP+L +   V+ + G+           +    + LH  RLP  +GTHHSK I L +  GVRVVV TAN    DW+ KS+G+W Q+FP                                 W  +             PP    F   L+DYL        TA L    +                            +  AA  ++     D++ A   L+ + PG      H G    ++G ++ R +     F RE                                               R  ++ Q SS GSL +KWL  F  S+    T D+    P  GD  I+WPTV  VR  L G++AGN+IP+                     P +++     PFL + WA   A    R RAMPHIK++ RY                                                          ND   +AWF+LTS+N+S  AWG LQ N + L I+SYE+GVLFLPS ++
Sbjct:  174 AILSNYMVDIDWLMSACPKLANIPQVMVIHGEGDGRQEYIQRKKPANWI-LHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFP---------------------------------WKDDDKD----------PPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNV---------------------------KINAAFFKKF----DYSDATVRLIASVPGY-----HTGFNLNKWGHMKLRTILQECIFDRE---------------------------------------------FRRSPLIYQFSSLGSLDEKWLAEFGNSLSSGITEDKTPLGP--GDSLIIWPTVEDVRCSLEGYAAGNAIPS---------------------PLKNVEK---PFLKKYWARWKADHSARGRAMPHIKTFTRY----------------------------------------------------------NDQ-KIAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPSPIK 520          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: UPI00053A8B45 (tyrosyl-DNA phosphodiesterase 1-like isoform X1 n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A8B45)

HSP 1 Score: 123 bits (308), Expect = 2.070e-25
Identity = 144/553 (26.04%), Postives = 205/553 (37.07%), Query Frame = 1
Query:  139 AMLFNYTWDMEWMVGECPRL--LSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARAL-----FSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHR-WAG--APRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLR 1761
            A+L NY  D++W++  CP+L  +S   V+   GD       R     +   +LH  RLP  +GTHHSK I L +  GVRVVV TAN    DW+ KS+G+W Q+FP                                 W  +             PP    F   L+DYL     + +  + T                    +LP   R    +      + D++ A   L+ + PG      H G    ++G ++ R++     F RE                                               R  +V Q SS GSL +KWL  F +S+    T D+    P  GD  I+WPTV  VR  L G++AGN+IP+                     P +++     PFL + WA   A    R+RAMPHIK++ RY                                                        +D     +AWF+LTS+N+S  AWG LQ N + L I+SYE+GVLFL S ++
Sbjct:  244 AILSNYMVDVDWLMSACPKLANISQVMVIHGEGDGRQEYIQRKKPANW---SLHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFP---------------------------------WKDDD---------NKDPPKCCGFEGDLIDYLN----VLKWPEFTA-------------------SLPG--RGNVKINAAFFKKFDYSNATVRLIASVPGY-----HTGLNLKKWGHMKLRSILQECIFDRE---------------------------------------------FRRSPLVYQFSSLGSLDEKWLAEFRDSLSCGITEDKTPLGP--GDPLIIWPTVEDVRCSLEGYAAGNAIPS---------------------PLKNVEK---PFLRKYWAKWKADHSARSRAMPHIKTFTRY--------------------------------------------------------SDQK---LAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLSSPIK 591          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A7R9L5N0_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9L5N0_9ACAR)

HSP 1 Score: 114 bits (286), Expect = 5.570e-23
Identity = 134/549 (24.41%), Postives = 198/549 (36.07%), Query Frame = 1
Query:  139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTG---DNASTLALRHAAQAFPHVALHGLRLPP-YGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQE-FPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLRRTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAV-RTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSL---SDKWLGTFYESMMGK--GTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLP 1749
            ++  NY ++M+W++ + P+     P++ V G   D  +T  ++   + +P++ L G  L   +GTHHSKM++L ++ G+RVV+ TAN   +DW QK++GVW    FP +P+                                         H   A      F   L++YL+    +  +                                          R D +AA   LV + PG      H GA  + RFG L+ R L S E  P+A                                              + Q SS GSL   +DKWL   + S +    G       P L    K+++P+V  VRTCL G+S G S+P S                   + T   +  +  +LH W    R GR+ A PHIK+Y R                                                            D   +A+F+LTSAN+S  AWGQL+ N   L+IKSYE+GVLF+P
Sbjct:  137 SLQMNYMFEMDWLLEQYPKQFRSLPMLVVYGSKRDGTATREMQSQTKPYPNIRLFGAHLVDMFGTHHSKMMLLRYDNGIRVVIHTANLIERDWFQKTQGVWISPLFPPLPS----------------------------------------THTSDADISQTRFKTDLIEYLKSYTSIEINEWIQTIR-----------------------------------RHDLSAAKVFLVGSVPGR-----HVGADNKCRFGHLKLRRLLS-EFGPSAKNVDSSWPA-------------------------------------IGQFSSIGSLGPTADKWLTNEFLSTLSAVCGVKSLVTKPRL----KLIFPSVENVRTCLEGYSGGGSLPYS-------------------SQTHRKQTYLTSYLHSWRSE-RTGRSIACPHIKTYTRL---------------------------------------------------------SGDNKQMAYFVLTSANLSKAAWGQLEKNDTQLAIKSYEIGVLFIP 486          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN)

HSP 1 Score: 114 bits (285), Expect = 2.490e-22
Identity = 144/592 (24.32%), Postives = 205/592 (34.63%), Query Frame = 1
Query:  142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAG--------------------------GCGRPPRGWHLESAIMRHEPHCRAAPPPANDFS-ATLVDYLRRTAGLTRHS-----------------------DATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPL---PAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWL-GTFYESMMGKGTLDQARGPPLRGDMKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLP 1749
            +L NY +D+ W+  ECPRL +  PVV V G+     A++H  + F +V     RLP  YGTHH+KM+++ + T VRV + TANF   DW+ K++GVW+Q+F L   G       R+        A G                           C   PR   +   ++  E    A       F+  T V      A  T H+                       D                     D      RA       +E  VDF       +          +  GA    F +   R  FS   +   P+  G                                           ++CQ SS GSL +KWL G F ES+M +  L  +   P++  + IVWP+V  VR  + GW AG ++P                      P ++++  +  +L +W       R  AMPHIK+Y R+                                                          +  G V W +LTS+N+S  AWG LQ NG  L I+SYE+GVLFLP
Sbjct:  520 LLTNYMYDLAWLFNECPRL-ADVPVVLVHGERDRE-AMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAVYAVGLSDLLSGEFSRVLLTNYMYDLAWLFNEC---PRLADVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYL----------STLGAPVVAFCRELERFDFSTATVALVPSVPGYHTGAAKDKYGHLRVRRILQHFNVPRSDHP-------------LICQFSSLGSLDEKWLFGEFAESLMPR-PLPTSTPMPIKS-LHIVWPSVDDVRNSIEGWHAGRAVPC---------------------PLKNMKPFLHKYLRKWTPPAALHRQNAMPHIKTYARF--------------------------------------------------------DPSQPGAVDWALLTSSNLSKAAWGALQKNGTQLMIRSYELGVLFLP 1004          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A383VVN0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VVN0_TETOB)

HSP 1 Score: 112 bits (279), Expect = 1.170e-21
Identity = 199/791 (25.16%), Postives = 277/791 (35.02%), Query Frame = 1
Query:  142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGD---NASTLALRHAAQAF--PHVALHGLRLP-PYGTHHSKMIILEFETG-VRVVVCTANFEAQDWDQKSEGVWWQEFPLVPAGSAPRGGARRDGXXXXXXAAGGCGRPPRGWHLESAIMRHEPHCRAAPPPANDFSATLVDYLR--RTAGLTRHSDATPXXXXXXXXXXXXXXXXAIDALPPAPRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLRARALFSREPLPAACGXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXDRGVIVCQCSSFGSLSDKWL----------GTFYES---------------------------------------------MMGKGTLDQARGPPLRGD-----MKIVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDLRASVAPFLH----RWAGAPRRGRARAMPHIKSYCRYFAPAAXXXXXXXXXXXXXXXXXXXXXXSGGSNXXXXXXRXXXXXXXXXXXXXXXXGTDNDAGTVAWFMLTSANMSTTAWGQLQANGA-LSIKSYEMGVLFLPSRLRAPDATAGFSVDPGGPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTPTRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEV-------------GLPLDLLPIPYSLDPPPYNPKAGDEPWCYHIPRS--GLD----TMGRTWESYFGN 2235
            ++ N+  DM W++  CP + +   V+ V G+   +A+ ++ + AA     P  A H   LP  YGTHHSK  +L +  G +R++V TAN    D + K++G+W+Q+FP   AG+A                              +A+              ++F + L DYL   +  GL     A                                    L A  DF+AA AAL+P+ PG      HAG+    +G LR RAL +   LPA                                               + QCSS GS+ +KWL          G++Y                                                  +     A G  +RG      +++VW T A V+    GW+ G SIP    N++                         PFL     RW G P  GR  AMPHIK+Y RY  P +XXXXXXXXXXXXXXXXXX    +G                                  +AW ++ S N+S  AWG LQ  G+ L ++SYE+GVL  P                   LE   RA                  PHR                       C+H    AA AA  ++   A+   +       + GL  +  +V             G+P+ LLP+PY L P  Y  + G+ PWC   PR   G+D    T G T   Y+GN
Sbjct:  382 VVSNFMVDMGWLLSACPAIATADKVLVVHGERGAHAAAISEQAAAAGLTSPRFAAHAPPLPITYGTHHSKAFLLGYRHGGLRLIVHTANMIYPDCNNKTQGLWYQDFPPKAAGAA------------------------------AAV--------------SEFESCLSDYLAALKLPGLWAGDVAW-----------------------------------LVAAADFSAARAALLPSVPGY-----HAGSKLHAYGHLRLRALLAASRLPAR----------------------------------------FQPAPCLLQCSSLGSIDEKWLRQEMVASMTAGSYYSEGDDLSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFARMRQAAAAGSAMRGGDPTLPLQLVWTTAAEVQHSREGWAGGGSIPGRHDNVMR------------------------PFLQWHYCRWGGEPA-GRQSAMPHIKTYTRYLPPGSXXXXXXXXXXXXXXXXXXQHGVAGAG------------------------------AELAWCIIASHNLSKAAWGSLQKGGSQLMVRSYELGVLLTPE------------------LEAAYRA-----------------HPHRHYS--------------------CTHETPGAAAAAAGSNVGSASKPPVRF---YAWTGLQQQQQQVADTATQPSSSSRSGVPV-LLPLPYLLPPKQY--QQGEVPWCVDPPRPFPGVDAFGYTCGNTPLRYYGN 932          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: K3WH37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH37_GLOUD)

HSP 1 Score: 99.0 bits (245), Expect = 4.590e-18
Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 1
Query:  142 MLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPL 447
            +L NY +DM W+ GECPRL    PV+ V G+    LA+ +  + + +V+L    LP PYGTHH+KM+++ + T VRV + TANF A DW+ K++GVW+Q+F L
Sbjct:   78 LLTNYMFDMPWLFGECPRL-HDVPVLLVHGER-DRLAMANECKGYTNVSLVAPYLPIPYGTHHTKMMVVVYPTKVRVAIFTANFIAIDWNNKTQGVWFQDFEL 178          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A443SPP2_9ACAR (Tyrosyl-DNA phosphodiesterase 1-like protein n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SPP2_9ACAR)

HSP 1 Score: 95.5 bits (236), Expect = 7.090e-17
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  148 FNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLA-LRHAAQAFPHVALHGLRL-PPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLVP 453
            FNY +D++W+V + P    G P+  V  D   T+A L    Q++P++ L    L  P+GTHH+KM+IL +E G+RVV+ TAN   +DWDQK++GVW+   PL P
Sbjct:  108 FNYMFDIDWLVDKYPSEFQGLPLFIVHQDKLETVAQLEQEVQSYPNIKLVRAHLMDPFGTHHTKMMILHYENGLRVVIHTANLIERDWDQKTQGVWFS--PLFP 209          
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Match: A0A6G0X136_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X136_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.430e-16
Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1
Query:  139 AMLFNYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGLRLP-PYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFP 444
            A+L NY  D++W+  +  RL   APV+ V G + ++++   A + F +V +    LP PYGTHH+KM+IL F+T VRV + TANF A DW+ K++GVW QEFP
Sbjct:   48 AILTNYKVDVDWLFAQSARL-QVAPVLLVHGSSPASMS--EACRQFKNVTVIAPPLPIPYGTHHTKMMILFFDTFVRVAIFTANFVAGDWESKTQGVWMQEFP 147          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353815 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5B8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE95_ECTSI5.400e-3728.50Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus T... [more]
TYDP1_ARATH3.440e-2625.67Tyrosyl-DNA phosphodiesterase 1 n=7 Tax=Camelineae... [more]
UPI00053A8B452.070e-2526.04tyrosyl-DNA phosphodiesterase 1-like isoform X1 n=... [more]
A0A7R9L5N0_9ACAR5.570e-2324.41Hypothetical protein (Fragment) n=1 Tax=Medioppia ... [more]
A0A2D4BMS2_PYTIN2.490e-2224.32Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A383VVN0_TETOB1.170e-2125.16Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
K3WH37_GLOUD4.590e-1846.60Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A443SPP2_9ACAR7.090e-1744.23Tyrosyl-DNA phosphodiesterase 1-like protein n=1 T... [more]
A0A6G0X136_9STRA2.430e-1646.60Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_185contigContig_185:231631..238181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353815|estExt_Genemark1.C_Ctg_1850036
BRITEko00000,ko01000,ko03400
KEGG koko:K10862
Preferred nameTDBP1
Description3'-tyrosyl-DNA phosphodiesterase activity
COG categoryV
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2031@1|root,KOG2031@2759|Eukaryota
Evalue1.08e-38
Seed ortholog2880.D8LE95
Hectar predicted targeting categoryother localisation
TranscriptId354137
TrackFilteredModels1
ProteinId353815
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353815gene_15490Tribonema minus UTEX_B_3156 geneContig_185 231631..238181 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353815Trimin1|353815|estExt_Genemark1.C_Ctg_1850036Tribonema minus UTEX_B_3156 polypeptideContig_185 231631..238181 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15490_12exon_15490_12Tribonema minus UTEX_B_3156 exonContig_185 231631..231723 -
exon_15490_11exon_15490_11Tribonema minus UTEX_B_3156 exonContig_185 232325..232435 -
exon_15490_10exon_15490_10Tribonema minus UTEX_B_3156 exonContig_185 232883..232920 -
exon_15490_9exon_15490_9Tribonema minus UTEX_B_3156 exonContig_185 233151..233188 -
exon_15490_8exon_15490_8Tribonema minus UTEX_B_3156 exonContig_185 233284..233375 -
exon_15490_7exon_15490_7Tribonema minus UTEX_B_3156 exonContig_185 233478..234120 -
exon_15490_6exon_15490_6Tribonema minus UTEX_B_3156 exonContig_185 234482..235120 -
exon_15490_5exon_15490_5Tribonema minus UTEX_B_3156 exonContig_185 235271..235399 -
exon_15490_4exon_15490_4Tribonema minus UTEX_B_3156 exonContig_185 236087..236127 -
exon_15490_3exon_15490_3Tribonema minus UTEX_B_3156 exonContig_185 236538..236641 -
exon_15490_2exon_15490_2Tribonema minus UTEX_B_3156 exonContig_185 237313..237491 -
exon_15490_1exon_15490_1Tribonema minus UTEX_B_3156 exonContig_185 238045..238181 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15490CDS_15490Tribonema minus UTEX_B_3156 CDSContig_185 238045..238181 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2244bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCATGAAGCCCTCTGCAGTGTCGGGATCCGCTCTAGCAGCTGTGGA
TCTGGTCAGCGACGAGGAGGAAGCGACTCCTGCAGCCAAGCGACAGAAGA
CCGCGGAGCCGCAGCCCCCGCCATCGCGGCCGCCGCTCGCCATGCTCTTC
AACTACACATGGGACATGGAGTGGATGGTGGGGGAGTGCCCGCGGCTGCT
GAGCGGCGCCCCCGTGGTGTTCGTAACGGGCGACAACGCGAGCACGCTGG
CGCTGCGGCACGCGGCGCAGGCGTTCCCGCACGTGGCGCTGCACGGCCTG
CGGCTGCCGCCGTACGGCACGCACCACAGCAAGATGATCATACTGGAGTT
TGAGACGGGGGTGCGCGTGGTGGTGTGCACCGCCAACTTCGAGGCGCAGG
ACTGGGACCAGAAGAGCGAGGGCGTGTGGTGGCAGGAGTTCCCGCTCGTC
CCCGCTGGCAGCGCCCCTCGCGGCGGTGCGCGTCGCGACGGCGGCGGCGG
CGGCGCGCGCGCTGCGGGGGGCTGCGGGCGCCCCCCCCGCGGCTGGCATC
TCGAGTCTGCCATCATGCGCCACGAGCCGCACTGCCGTGCTGCCCCGCCG
CCCGCGAACGACTTCAGCGCGACGCTCGTCGACTACCTGCGCCGCACCGC
CGGCCTCACGCGCCACAGCGACGCAACTCCGCCGCCCGCCGCCGCCGCCG
CCACCGGCGCGCCGCCGCCGCCGCCGCCCGCCATCGACGCGCTGCCGCCC
GCGCCGCGCGCCGTCGCGGCGCTCGCGCGGCGCCTCGAGGCGCGCGTGGA
CTTTGCCGCGGCGGCGGCGGCGCTCGTCCCCGCGGCGCCGGGCTCGGGGA
CCAATTACACGCACGCGGGCGCGGTGCGAACGCGCTTCGGCCAGCTGCGC
GCGAGGGCGCTGTTCAGCAGGGAGCCGCTGCCCGCGGCGTGCGGCGGCGG
CGGCAGCGGCGGTGGCGGCGGCGGCGGTGGCGGCGGCAAGAGCGGCGGCG
GCGGCGGCGGCGGCAAGAGCGGCGGCGGCGGCGGCAGTGGCGGCGGTGGC
AGCGGCGGCGGAGACAGGGGCGTCATCGTGTGCCAGTGCAGCTCGTTTGG
CAGCCTGAGCGACAAGTGGCTGGGGACGTTCTACGAGAGCATGATGGGGA
AGGGCACGCTGGACCAGGCGCGCGGGCCGCCGCTGCGCGGCGACATGAAG
ATCGTGTGGCCCACGGTCGCCGCCGTGAGGACGTGCCTGGCGGGGTGGTC
CGCGGGCAACTCCATCCCCGCGTCGCCCGGCAACCTGCTCGCCGCGTACA
AGGGCGCGGCGCTCGCGGACGCGCGCGCCGCCGCGCCCACGCGCGACCTC
CGCGCATCCGTCGCGCCGTTCCTGCACCGCTGGGCCGGCGCGCCGCGCCG
CGGCCGCGCGCGCGCCATGCCGCACATCAAGAGCTACTGCCGCTACTTTG
CGCCTGCGGCGGCGGCGGCAGGGAGCGGTGGCGGCAGTGGCAGTGGCGGC
AGCAGCGGCGGCGGCGGCGGCAGTAGCAGCGGCGGCAGCAATGGCGGCGG
CAGCAATGGCAGGGGCACTGGCGGCGGCGGTGGCGGCAGCAGCGGCGGCG
GCAACGGCTACGGGACCGACAACGACGCGGGCACGGTGGCGTGGTTCATG
CTGACGAGCGCCAACATGAGCACCACGGCGTGGGGCCAGCTGCAGGCGAA
CGGCGCGCTGAGCATCAAGTCGTACGAGATGGGCGTGCTGTTCCTGCCGA
GCCGCCTGCGCGCGCCGGACGCGACGGCGGGGTTCTCCGTGGACCCCGGG
GGCCCCCTCGAGGTGCGTGTACGCGCGGCGGCGGCTCCGCTGCTGCAGCC
AGGCGGTCTGTCGCGCGCCGCAGTCCTGGGGCCTCACCGCTGTCGCGGCC
GCGCGCTGGGCGTATGCACCAGGGTTGGCGTTAAGCTCGAGCTCACCCCC
ACACGAAGGTGCTCGCACGGCGCCAGCGCGGCTGCCCTCGCCGCACTTTG
GGCGTCGCCAGCAGGCGCCGCGACGCGCGCGCTGGATCTTGCACTGCGAC
TTACGTACGGCGGCCTCGGCGCTGAGGCTGACGAGGTGGGGCTGCCTCTG
GACCTGCTGCCGATACCCTACTCCCTCGACCCGCCGCCCTACAACCCTAA
GGCCGGCGACGAGCCCTGGTGCTACCACATCCCGCGCAGCGGCTTGGACA
CCATGGGGCGCACATGGGAATCGTACTTCGGCAACAACATGTAG
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protein sequence of jgi.p|Trimin1|353815

>Trimin1|353815|estExt_Genemark1.C_Ctg_1850036 ID=Trimin1|353815|estExt_Genemark1.C_Ctg_1850036|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=748bp
MSMKPSAVSGSALAAVDLVSDEEEATPAAKRQKTAEPQPPPSRPPLAMLF
NYTWDMEWMVGECPRLLSGAPVVFVTGDNASTLALRHAAQAFPHVALHGL
RLPPYGTHHSKMIILEFETGVRVVVCTANFEAQDWDQKSEGVWWQEFPLV
PAGSAPRGGARRDGGGGGARAAGGCGRPPRGWHLESAIMRHEPHCRAAPP
PANDFSATLVDYLRRTAGLTRHSDATPPPAAAAATGAPPPPPPAIDALPP
APRAVAALARRLEARVDFAAAAAALVPAAPGSGTNYTHAGAVRTRFGQLR
ARALFSREPLPAACGGGGSGGGGGGGGGGKSGGGGGGGKSGGGGGSGGGG
SGGGDRGVIVCQCSSFGSLSDKWLGTFYESMMGKGTLDQARGPPLRGDMK
IVWPTVAAVRTCLAGWSAGNSIPASPGNLLAAYKGAALADARAAAPTRDL
RASVAPFLHRWAGAPRRGRARAMPHIKSYCRYFAPAAAAAGSGGGSGSGG
SSGGGGGSSSGGSNGGGSNGRGTGGGGGGSSGGGNGYGTDNDAGTVAWFM
LTSANMSTTAWGQLQANGALSIKSYEMGVLFLPSRLRAPDATAGFSVDPG
GPLEVRVRAAAAPLLQPGGLSRAAVLGPHRCRGRALGVCTRVGVKLELTP
TRRCSHGASAAALAALWASPAGAATRALDLALRLTYGGLGAEADEVGLPL
DLLPIPYSLDPPPYNPKAGDEPWCYHIPRSGLDTMGRTWESYFGNNM*
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mRNA from alignment at Contig_185:231631..238181-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6551bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )
ATGAGCATGAAGCCCTCTGCAGTGTCGGGATCCGCTCTAGCAGCTGTGGA TCTGGTCAGCGACGAGGAGGAAGCGACTCCTGCAGCCAAGCGACAGAAGA CCGCGGAGCCGCAGCCCCCGCCATCGCGGCCGCCGCTGTGGAGACTCACG ACTGTACGTGGCATAGACCCTAAGTACAACGAGGGAGCTGTAACATTTGG TCAGCTCATGAGCGGGCAGTGGAGCAGGCAAGTGGTACATAAGCTTGTAC TTCAGCTTTCGCAGTGGATGCATCTCCAGAGTCACTCCCTAGTCGCATCA AACAACACGATTTCTGAGCCGCTAGCGCAATCGAGCAAGCTAATGTAATT GCCCGCTCAGACCACCAAGAGCCTGCTGCTTTGGGTCAGATTGTTACGTG TACCCACCTCACCGTGCTGAGCTTCCGGATTCGCACACCAACCGCTTCGC CAGGCCAACAACGTCAATGCGACACATACCTGACTCTGCTCCCCATGAAG CTGATGCTGTGTGTGCGCGCCTTATGCACGCTGCTCAGCCCCTTGCAGCG ACCTTATCCAGGCTGCGCTCAACGAGCCCTGCAGCTTTCCTCACACACCG CCGCGCACATGCATGCTCTCATCCACCTTGCCCCCCCCCCCCCCCCCCCC CCCCCTCCCCCCGCCCACCCCCCGTAAACCCCTCCCCCAGCGCCATGCTC TTCAACTACACATGGGACATGGAGTGGATGGTGGGGGAGTGCCCGCGGCT GCTGAGCGGCGCCCCCGTGGTGTTCGTAACGGGCGACAACGCGAGCACGC TGGCGCTGCGGCACGCGGCGCAGGCGTTCCCGCACGTGGCGCTGCACGGC CTGCGGCTGCCGCCGTACGGTGCGCGGTGACGCTCAGCTTCAGCATGTGT AACTTGAAGTTAGGTTGTGAAGGATGTCCACGCAGCGTGGCGCGCGCGCG GGCACGTCGCAGACCCTCTAGCCTAGGTACCCCTGCGCTGCGGAGCCAGT GGTGATGACTTGAAAGGTTAGGGCTAGCTGCTTCGGCCGCGCAGAGCATC GCCCTGGGGTGCACGCATCTCTCGAGGTGCAGATGAGGCGGTCTGCACGT GCAAGCAGCATGTGCAGCGGGCCAGTGCATGCACTCACTTGCTTGTGAAG TGTGGTAGCTTGCACACGCACGCCACGACGCCCAAAGATGCCGCGCCGCC GCCAGCTGCAGCACGCACAATGGCACTCTTGGCGGCGGACGCGGCGCCAT GGAGGCACCAGGGGGTTCGTACCATACCGCAGAGCTCAAGTGGGGACGCT CCACATGAGCTGTGTGGCAAGCACACGCGTGCGCAGCCAGACGGTCTGCC TCACTCTCTCCACGGTGGGACGCGCGGTCAGCAGTTGAAGTTTTGGGGGG GAGTCACTCGCCTTGGCCGAGCACTCTCCGTGGGTGACTGCGATCACCGT ACGCGCGTCGCTCAACTCGTCCCACACCTCAGACTTCAACAGTGAACCTC AGCTGTGAACTCTGCCCGCCGCGTGCGCGGCCGCTCGCAGGCACGCACCA CAGCAAGATGATCATACTGGAGTTTGAGACGGGGGTGCGCGTGGTGGTGT GCACCGCCAACTTCGAGGCGCAGGACTGGGACCAGAAGAGCGAGGTGCGT CACTGTTGAAGTTTGCGCTGCGGACCGGACTGCGAGCGCGCACGCCGCGC GACGGTCCACACACAATGTGACGCGCTGCGCAGCCCGCGTGCGCACGAAG TTCGGACGTACGTCCAGGATGCGATATGCACACGCCGACATGCAGTAGCG AACGGCTCATGGGCGTGTGACAGATTATCGCACTACTTGCAAGGCTGCAA ACTTCAGCTTCAACACGGCTTTCACAGGCTTGTGAGTGCTTGCTTTCGGC CGCCTGTGCCGTCAAAGCTGCGTCAATGCGGCACCGCACGACAATCATTT GTCATGTTCGTCGTCATGCGGCGCCTTCGCCATCAGCGGTCGCCATTCAT GCGCTCATTTTTCGCTCCGCTGCCTGTGGCGTCCTCTGCTGTTGCGGCGT GCAGGGCGTGTGGTGGCAGGAGTTCCCGCTCGTCCCCGCTGGCAGGTACG CAGGCATGTACGCAAGCCACGGCAGCGCTCAGCTCGTAGGCAAAGTGCCA CCCTCAGCTAATGTGAGCAGTGGCAGCGCTCGATCTGCCCGCTACGTGTG TGCGCAAACGACAGCAAAGCTTCCTCCGCTCACAGCCCCTGGCCACGTTT GCATAGCTGTTACAGCGCCGCTGCTCAGAATCGCCTGGCCGCCGCGTGCA TCGACCACGTCAGCGACAGTCACGACCGGTAGTCTACACCCGTGCCGTGG GGCCTGCAGCGCGCGCAGGCGTGCGCTTCGATTCGCTTTGGAGTGCGTGC GCGCAAGTGTGGGATAGGGTTGGAGTCAGGGCTAGGATCAGGGCTTGCGG GAGCAGTGCGGCGGCAGCACTCACCTTGCAGAGCACTGCCACTCTCAGGC ACATCCTATGTATTGGTCTGCTCCTGGCCTGCGTAGACGCCCTGGGCCTC ACGGCCTCGGTGCTCAGCGCCGAGTGTCATCACGCCAGCCTTGCCATCCG GAGTGCACAGCACACACGGCAATCGCGCAGTCGGTCACCAGCGCGCCCCG CCGCGCCGCCAGCGGACACGTGTGTACACTGCAGTTAGGTTTCGGTATCA GCATCACGCGGACGCCGCACCTGCGCCGAGCGCTGACGTCAGTGAGTGCT GCTGCGCCGCGGGGGGCTTTCGCCGCCAGCAGCGCCCCTCGCGGCGGTGC GCGTCGCGACGGCGGCGGCGGCGGCGCGCGCGCTGCGGGGGGCTGCGGGC GCCCCCCCCGCGGCTGGCATCTCGAGTCTGCCATCATGCGCCACGAGCCG CACTGCCGTGCGTACGTACCCGTTGGACGCGCAATGCTCCCTAGAAGCTC AACGACCAGAGGGTACGAGCCGTTCACATGGCCCCCCCATCCCCATCACA CCCCAAATGCCCCCCCTTGTGTGTCACCCCCTCCCCCCCCGACTCCCTTG TCCCCCCGCAGTGCCCCGCCGCCCGCGAACGACTTCAGCGCGACGCTCGT CGACTACCTGCGCCGCACCGCCGGCCTCACGCGCCACAGCGACGCAACTC CGCCGCCCGCCGCCGCCGCCGCCACCGGCGCGCCGCCGCCGCCGCCGCCC GCCATCGACGCGCTGCCGCCCGCGCCGCGCGCCGTCGCGGCGCTCGCGCG GCGCCTCGAGGCGCGCGTGGACTTTGCCGCGGCGGCGGCGGCGCTCGTCC CCGCGGCGCCGGGCTCGGGGACCAATTACACGCACGCGGGCGCGGTGCGA ACGCGCTTCGGCCAGCTGCGCGCGAGGGCGCTGTTCAGCAGGGAGCCGCT GCCCGCGGCGTGCGGCGGCGGCGGCAGCGGCGGTGGCGGCGGCGGCGGTG GCGGCGGCAAGAGCGGCGGCGGCGGCGGCGGCGGCAAGAGCGGCGGCGGC GGCGGCAGTGGCGGCGGTGGCAGCGGCGGCGGAGACAGGGGCGTCATCGT GTGCCAGTGCAGCTCGTTTGGCAGCCTGAGCGACAAGTGGCTGGGGACGT TCTACGAGAGCATGATGGGGAAGGGCACGCTGGACCAGGCGCGCGGGCCG CCGCTGCGCGGCGACATGAAGATCGTGTGGCCCACGGTCGCCGCCGTGAG GTGAGCGCCCACCCCAAAGTTAACCCTATATTTGCCGCTAGCCCTGACCC AAATGCGTGCTTTATGTGCAAAGCACATTGGCTGCTCTTTCATCCGTGGA AGAGGGGCAAGGGGTGGGGTGGGCGCAGCGCCCGACGCCATCAGCGACAT CGCGTCAACGCAGCACCGCAGGACCCCGCCGCCTGAAGTCGCCCGCACCG TTGAGAGACGCGCAGCAGTAGCAGCAGCAGCAAGCGGCAGCGCCCGCCGC ACACCGTTCTCGCCCCCTCCGCATCCGCCGCCGCGCGGCTGCGCCGCCGC GTCAGCAGCACCCTCACCTCCCCCCCCGAAACGCCCCCGCGCTCGCAACC ACCGCAACCAGGACGTGCCTGGCGGGGTGGTCCGCGGGCAACTCCATCCC CGCGTCGCCCGGCAACCTGCTCGCCGCGTACAAGGGCGCGGCGCTCGCGG ACGCGCGCGCCGCCGCGCCCACGCGCGACCTCCGCGCATCCGTCGCGCCG TTCCTGCACCGCTGGGCCGGCGCGCCGCGCCGCGGCCGCGCGCGCGCCAT GCCGCACATCAAGAGCTACTGCCGCTACTTTGCGCCTGCGGCGGCGGCGG CAGGGAGCGGTGGCGGCAGTGGCAGTGGCGGCAGCAGCGGCGGCGGCGGC GGCAGTAGCAGCGGCGGCAGCAATGGCGGCGGCAGCAATGGCAGGGGCAC TGGCGGCGGCGGTGGCGGCAGCAGCGGCGGCGGCAACGGCTACGGGACCG ACAACGACGCGGGCACGGTGGCGTGGTTCATGCTGACGAGCGCCAACATG AGCACCACGGCGTGGGGCCAGCTGCAGGCGAACGGCGCGCTGAGCATCAA GTCGTACGAGATGGGCGTGCTGTTCCTGCCGAGCCGCCTGCGCGCGCCGG ACGCGACGGCGGGGTTCTCCGTGGACCCCGGGGGCCCCCTCGAGGTGCGT GTACGCGCGGCGGCGGCTCCGCTGCTGCAGCCAGGCGGTCTGTCGCGCGC CGCAGTGCGAGGGCGTACGGTTTAAGTTAGGGTTAGGGTTAGGGTTAGGG TTAAGGTTAGGCGCTGGTGACGTGGTGGCCCTCACCGCAACGCCGTCGCA ACGCAGGTCCTGGGGCCTCACCGCTGTCGCGGCCGCGCGCTGGGCGTATG CACCAGGGTTGGCGTTAAGCTCGAGCTCACCCCCACACGAAGGTGCTCGT AAGTACACATGGTCAAGGCGCAATCGTTCTGTGCCTTCGAACGCTTGCTG CTGCCGGTCGCCGCTGCGGATCGCGCCGGCGCCCCTCACGCAGGCACGGC GCCAGCGCGGCTGCCCTCGCCGCACTTTGGGGTTAGTTAGGTTTAGCCGT GTCTAACCCTAACCCTAACCCGCGGCAGTGCTGCGCGCCGGGTGACTGAC GAACCTGCGGGCAGTCCTTCATGTGGCGGCGCTAACCCTAACCCTAACCC TAACCCTAACCCTAAGCTGCAACGCCCCATCGACGGTCACACGATCATCG TGCTGCCGCCACGTCTCGTCTGCGGCGAACTGCGGTACCAGAGCCGCTGT CGCCGCCACAGCGTCGCCAGCAGGCGCCGCGACGCGCGCGCTGGATCTTG TCCGCGTCATCAGCCCCGCGCATACGTCGGCCTCAGGTCCTCATATTCAT ATACTTCAAAGTACATATATATGTCGTCTATACAAGCATATGTATTATTG TTGGCACGAGGTGCGTGTTGCGCACGCGCGTCTCAGGCCGCTGCTGCCCC GTCTGCCGCGTCCTCCGCCGGCGTTGCCCGGCATATGTATATAGACGTAT GTATATTCATCACCGGCACGAGTCGCGAGTCGTGCATGCGCGTCTCACGA GTCGCGAGTCGCGCAAGCGCATCTCACGCCGCTGCCGCCCCGTCTGCTGC GTCCTCCGCATGCGCTGCGGCTCATGTAAGGCATATGTTTCTGGACGTAT ACTTCGCGAAGATTTTATTATCGCCGGGATGAGTCGCGTGTTGCGCGCAC GCATCTCACGCCTCTGCCGCCCCCCGCTTGCCGTGTTTCCTGCCAGGCAC TGCGACTTACGTACGGCGGCCTCGGCGCTGAGGCTGACGAGGTGGGGCTG CCTCTGGACCTGCTGCCGATACCCTACTCCCTCGACCCGCCGCCCTACAA CCCTAAGGTATGTATGTACGCATCGAGCATTACTGAGCACTGCTTCATTT CATGTCGAATCATTGGGCTCTCCACTTGAAGTGTGGCGACATGGACTCGG CTGAGTCGTATTTCAGCTGACGCAGTGGCTCCTAGAGAGGTTCAGCCGTG GCAATCTGAAGTGCTGCGCCACCTGCGTTGGTGACGTGGGGTTTGCGGTG GTCGCAAGGGGCGGCAGTATTCCATTCATTCATTCATGTTTGCAATTCAT TCATTGATTCATTCACTGGCAGCCTCAACGTCCACTCCACACCGGTCACC CGCTGAATGGCCAGCAACACTGCTGAAGCATCGTCAAGCTCAGGGGCGTA TCGCGCTTGAACCTTCATTTACTTTCAAGATCCCACATCAAGCGCAATCA ATACCGGACTCGAGTCTTGCGTCCGCTGACAGCTGGCAAGGCAGGGGTGG CTAGTGCTGGACGTCGCCAATGTGCCTGAACTTCCAGCACCAACATGTCA TGCGTCACTTGAAAGCGTCGACGAGAGTGCATGTTGAACGTGATCGGTCA GGCTCACACGGCGGAGCGTCCGCCCTAATTGTGAACCTCAACTTGCACTT CGCCGCAGGCCGGCGACGAGCCCTGGTGCTACCACATCCCGCGCAGCGGC TTGGACACCATGGGGCGCACATGGGAATCGTACTTCGGCAACAACATGTA G
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Coding sequence (CDS) from alignment at Contig_185:231631..238181-

>mRNA_15490 ID=mRNA_15490|Name=jgi.p|Trimin1|353815|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2244bp|location=Sequence derived from alignment at Contig_185:231631..238181- (Tribonema minus UTEX_B_3156 )
ATGAGCATGAAGCCCTCTGCAGTGTCGGGATCCGCTCTAGCAGCTGTGGA
TCTGGTCAGCGACGAGGAGGAAGCGACTCCTGCAGCCAAGCGACAGAAGA
CCGCGGAGCCGCAGCCCCCGCCATCGCGGCCGCCGCTCGCCATGCTCTTC
AACTACACATGGGACATGGAGTGGATGGTGGGGGAGTGCCCGCGGCTGCT
GAGCGGCGCCCCCGTGGTGTTCGTAACGGGCGACAACGCGAGCACGCTGG
CGCTGCGGCACGCGGCGCAGGCGTTCCCGCACGTGGCGCTGCACGGCCTG
CGGCTGCCGCCGTACGGCACGCACCACAGCAAGATGATCATACTGGAGTT
TGAGACGGGGGTGCGCGTGGTGGTGTGCACCGCCAACTTCGAGGCGCAGG
ACTGGGACCAGAAGAGCGAGGGCGTGTGGTGGCAGGAGTTCCCGCTCGTC
CCCGCTGGCAGCGCCCCTCGCGGCGGTGCGCGTCGCGACGGCGGCGGCGG
CGGCGCGCGCGCTGCGGGGGGCTGCGGGCGCCCCCCCCGCGGCTGGCATC
TCGAGTCTGCCATCATGCGCCACGAGCCGCACTGCCGTGCTGCCCCGCCG
CCCGCGAACGACTTCAGCGCGACGCTCGTCGACTACCTGCGCCGCACCGC
CGGCCTCACGCGCCACAGCGACGCAACTCCGCCGCCCGCCGCCGCCGCCG
CCACCGGCGCGCCGCCGCCGCCGCCGCCCGCCATCGACGCGCTGCCGCCC
GCGCCGCGCGCCGTCGCGGCGCTCGCGCGGCGCCTCGAGGCGCGCGTGGA
CTTTGCCGCGGCGGCGGCGGCGCTCGTCCCCGCGGCGCCGGGCTCGGGGA
CCAATTACACGCACGCGGGCGCGGTGCGAACGCGCTTCGGCCAGCTGCGC
GCGAGGGCGCTGTTCAGCAGGGAGCCGCTGCCCGCGGCGTGCGGCGGCGG
CGGCAGCGGCGGTGGCGGCGGCGGCGGTGGCGGCGGCAAGAGCGGCGGCG
GCGGCGGCGGCGGCAAGAGCGGCGGCGGCGGCGGCAGTGGCGGCGGTGGC
AGCGGCGGCGGAGACAGGGGCGTCATCGTGTGCCAGTGCAGCTCGTTTGG
CAGCCTGAGCGACAAGTGGCTGGGGACGTTCTACGAGAGCATGATGGGGA
AGGGCACGCTGGACCAGGCGCGCGGGCCGCCGCTGCGCGGCGACATGAAG
ATCGTGTGGCCCACGGTCGCCGCCGTGAGGACGTGCCTGGCGGGGTGGTC
CGCGGGCAACTCCATCCCCGCGTCGCCCGGCAACCTGCTCGCCGCGTACA
AGGGCGCGGCGCTCGCGGACGCGCGCGCCGCCGCGCCCACGCGCGACCTC
CGCGCATCCGTCGCGCCGTTCCTGCACCGCTGGGCCGGCGCGCCGCGCCG
CGGCCGCGCGCGCGCCATGCCGCACATCAAGAGCTACTGCCGCTACTTTG
CGCCTGCGGCGGCGGCGGCAGGGAGCGGTGGCGGCAGTGGCAGTGGCGGC
AGCAGCGGCGGCGGCGGCGGCAGTAGCAGCGGCGGCAGCAATGGCGGCGG
CAGCAATGGCAGGGGCACTGGCGGCGGCGGTGGCGGCAGCAGCGGCGGCG
GCAACGGCTACGGGACCGACAACGACGCGGGCACGGTGGCGTGGTTCATG
CTGACGAGCGCCAACATGAGCACCACGGCGTGGGGCCAGCTGCAGGCGAA
CGGCGCGCTGAGCATCAAGTCGTACGAGATGGGCGTGCTGTTCCTGCCGA
GCCGCCTGCGCGCGCCGGACGCGACGGCGGGGTTCTCCGTGGACCCCGGG
GGCCCCCTCGAGGTGCGTGTACGCGCGGCGGCGGCTCCGCTGCTGCAGCC
AGGCGGTCTGTCGCGCGCCGCAGTCCTGGGGCCTCACCGCTGTCGCGGCC
GCGCGCTGGGCGTATGCACCAGGGTTGGCGTTAAGCTCGAGCTCACCCCC
ACACGAAGGTGCTCGCACGGCGCCAGCGCGGCTGCCCTCGCCGCACTTTG
GGCGTCGCCAGCAGGCGCCGCGACGCGCGCGCTGGATCTTGCACTGCGAC
TTACGTACGGCGGCCTCGGCGCTGAGGCTGACGAGGTGGGGCTGCCTCTG
GACCTGCTGCCGATACCCTACTCCCTCGACCCGCCGCCCTACAACCCTAA
GGCCGGCGACGAGCCCTGGTGCTACCACATCCCGCGCAGCGGCTTGGACA
CCATGGGGCGCACATGGGAATCGTACTTCGGCAACAACATGTAG
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