mRNA_15055 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352280
Unique NamemRNA_15055
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A835ZBW6_9STRA (Noc2p family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW6_9STRA)

HSP 1 Score: 935 bits (2417), Expect = 0.000e+0
Identity = 726/726 (100.00%), Postives = 726/726 (100.00%), Query Frame = 1
Query:    1 MGKPASKRTKKFQKKGGLGGIQKNLDKKKQVKAIKRKQAVRAQTREEKASEAEXXXXXXXXXXXXXXXXXSQAPPLPAAVDLDEFMECRSLYAAVEVGGSGAEEYSVEIDFAGLEEALGARQRKKKRAKPGAPAADAAAAELTVEGVDKLLARVAADSGGAXXXXAAPLTWLAHAFRAAVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAQLLPQADAAAAADGGDGEAAAAGVRAASRSAFLQRHAKMPRSEAWPRLAGALRAFLEAAPHALLSAAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGSSGXXXXXXXXXATMAALRTGVAELYRHEPAASQLHAFVFLHTMAATVEAAEEGGKAGEAATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXXXXXXXXXFALAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPDYAGRCARALTAAAAXXXXXXXXXXXADVAAAMRAAAEAIERRARDVERARSRLSTHPANVTALEALRPIDGAPAAARLALLDARAGGGXXXXXXXXKKQKGKAGAPPARALRQ 2178
            MGKPASKRTKKFQKKGGLGGIQKNLDKKKQVKAIKRKQAVRAQTREEKASEAEXXXXXXXXXXXXXXXXXSQAPPLPAAVDLDEFMECRSLYAAVEVGGSGAEEYSVEIDFAGLEEALGARQRKKKRAKPGAPAADAAAAELTVEGVDKLLARVAADSGGAXXXXAAPLTWLAHAFRAAVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAQLLPQADAAAAADGGDGEAAAAGVRAASRSAFLQRHAKMPRSEAWPRLAGALRAFLEAAPHALLSAAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGSSGXXXXXXXXXATMAALRTGVAELYRHEPAASQLHAFVFLHTMAATVEAAEEGGKAGEAATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXXXXXXXXXFALAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPDYAGRCARALTAAAAXXXXXXXXXXXADVAAAMRAAAEAIERRARDVERARSRLSTHPANVTALEALRPIDGAPAAARLALLDARAGGGXXXXXXXXKKQKGKAGAPPARALRQ
Sbjct:    1 MGKPASKRTKKFQKKGGLGGIQKNLDKKKQVKAIKRKQAVRAQTREEKASEAEXXXXXXXXXXXXXXXXXSQAPPLPAAVDLDEFMECRSLYAAVEVGGSGAEEYSVEIDFAGLEEALGARQRKKKRAKPGAPAADAAAAELTVEGVDKLLARVAADSGGAXXXXAAPLTWLAHAFRAAVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAQLLPQADAAAAADGGDGEAAAAGVRAASRSAFLQRHAKMPRSEAWPRLAGALRAFLEAAPHALLSAAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGSSGXXXXXXXXXATMAALRTGVAELYRHEPAASQLHAFVFLHTMAATVEAAEEGGKAGEAATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXXXXXXXXXFALAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPDYAGRCARALTAAAAXXXXXXXXXXXADVAAAMRAAAEAIERRARDVERARSRLSTHPANVTALEALRPIDGAPAAARLALLDARAGGGXXXXXXXXKKQKGKAGAPPARALRQ 726          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A6H5KR85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR85_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.150e-22
Identity = 117/407 (28.75%), Postives = 158/407 (38.82%), Query Frame = 1
Query:  775 KMPRSEAWPRLAGALRAFL-------------------EAAPHALLSAAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGSSGXXXXXXXXXA--TMAALRTGVAELYRHEPAASQLHAFVFLHTMA-----ATVEAAEEGGKAGEA--ATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXXXXXXXXX------------------------FALAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPD 1839
            K+ ++EAWPRL GAL +FL                   E    +    + AAT+               L+ PFP LAR  L                          + SQP+P  H A + +YR YR A ER+ G  G         A  ++  LR  +AEL+  E  ++ LHA+V++H +A     A  E  + GG A EA  A   +RSW FLQ + LWT VV A  +                    +                  PG    P  LALAR+AQDLAAAAGVFLP +   +G LE+      R  A                                           L+A+A L +++LR A  + A+  EAA L+AREA  Y  S   P+
Sbjct:  220 KLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGCADSSKQGSSAATSASLEDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGGGRGARVMARGEGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVGAAAEVKKGGGMAREAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSS-----------------LGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHYLVGLLELLHAREARPGATAPSAGGPADGEEAGPGGLTVASGXXXXXXXXXXXXXXXAALDLSAMAGLGKEDLRVAEVRAAVSREAAGLIAREAVCYRWSAGMPE 609          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: D8LEQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ5_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.370e-22
Identity = 130/407 (31.94%), Postives = 174/407 (42.75%), Query Frame = 1
Query:  775 KMPRSEAWPRLAGALRAFLEAAPHALLS-------------------AAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGSSGXXXXXXXXXA--TMAALRTGVAELYRHEPAASQLHAFVFLHTMAA-TVEAAEE----GGKAGEA--ATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXXXXXXXXXFA------------------------LAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPD 1839
            K+ ++EAWPRL GAL +FL +A  ++ +                    +  AT+               L+ PFP LAR  L    D                     + SQP+P  H A + +YR YR A ER+ G  G         A  ++  LR   AEL+  E  ++ LHA+V++H +A   VEAA E    GGKA +A  A   +RSW FLQ + LWT VV A  +                    +                  PG    P  LALAR+AQDLAAAAGVFLP +   +G LE+      R  +     XXXXXXXXXXXX                          L+A+A L +++LR    + A+  EAA L+AREA  Y  S   P+
Sbjct:  224 KLEKAEAWPRLGGALLSFLTSALDSVETEWATSNSVAVEGRADSSKQGSSGATSASLVDGLDRMRNHVPLLFPFPRLARRYLAFLLDVLQTSDNTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGGGRGAGVMAKGDGAGSSLPLLREWFAELFGVEKPSAYLHAYVYIHDLAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSS-----------------LGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHHLVGLLELLHAREARPGSTASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDLSAMAGLGKEDLRVVEVRAAVSREAAGLVAREAVCYRWSAGMPE 613          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A835ZK48_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK48_9STRA)

HSP 1 Score: 985 bits (2546), Expect = 0.000e+0
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 1
Query:    1 MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ 1665
            MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ
Sbjct:    1 MGGGLDGALTPTNASNTTRSIMDLTTPPRANRHTVDVDRSLKQSSFVVFLYLLSVGVMIPIFPTLLMQESEDRAVTNSFLHFIGTSNLDRCLFAAESSXXXXXXXXXXXXXXXXRAIPXXXXXXXXXXXXXXVASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFKPNLASLLPAVIFIYMASGSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHKARGAVSDMDAAEARERGGSHPEMVELLHMPPQ 555          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A173MDR5_9BACT (MFS transporter, DHA1 family, tetracycline resistance protein n=1 Tax=Filimonas lacunae TaxID=477680 RepID=A0A173MDR5_9BACT)

HSP 1 Score: 194 bits (492), Expect = 1.370e-52
Identity = 133/394 (33.76%), Postives = 210/394 (53.30%), Query Frame = 1
Query:  397 VASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHK 1569
            VAS  NG++T    A++F   P++G  SD  GR+P+LLFS      +YL +A +P++  +FV RV+ G+T    T   A I+D+S     A    N G+VGAAFG+ FIIGP               +GG LG I   +P +A+A L   + ++ +++  E+L +E R  F  K A+P+ +L + K  P +A L  +++ IY+AS +V  TW  +   +FGW    IG  L  VGL +A  QG L+R ++PK           + + ++   G  L A+ +T +A ++K WM++A ++  A+G I  P +   +   V  +E G LQGA  S+ +    +G  + SSL A F  +  AP     + PG  +L  +VL++I+   A RSF +  K
Sbjct:   44 VASEYNGWLTFAYAAMQFLCAPLLGNLSDRYGRRPVLLFSLFGFGIDYLFLAFAPSIAWLFVGRVIAGITGASFTTATAYIADISAPEKRAQ---NFGMVGAAFGLGFIIGPT--------------LGGVLGHIGIKVPFYAAAALSLLNWLYGYFILPESLASENRRPFSWKRANPIGSLLLLKKYPTIAGLTSSLVLIYVASHAVQSTWTYYNMLKFGWNEAWIGYSLGFVGLMVALVQGGLIRLVIPK-----------IGQHKSVYTGLLLYALGFTLFAFATKGWMMFAFMVPYALGGIFGPSIQGLISGEVPPNEQGELQGALTSLISATAIVGPPMMSSLFAWFTSKN-APV----QFPGAPFLAGAVLTLISTFLAIRSFRKTQK 404          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A1S2VPE9_9BACT (Tetracycline resistance MFS efflux pump n=1 Tax=Arsenicibacter rosenii TaxID=1750698 RepID=A0A1S2VPE9_9BACT)

HSP 1 Score: 191 bits (486), Expect = 1.030e-51
Identity = 123/392 (31.38%), Postives = 207/392 (52.81%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHH 1566
            AS  +G +T     ++F   PV+G  SD  GR+P+LLFS      +Y+   ++PT+ ++F+ R++ G+T    T   A I+DVS     A    N GL+GAAFG+ FIIGP               +GG LG     +P + SA L   +V++  +V  E+L  E R  F  K A+P+ AL   +  P + SL+ +++FIY+A  ++  TW      +F W  + +G+ LA +GL I   QG L R L+PK           + ++++  VG  + AI +  +AL+++ WM++A ++  ++G I+ P L   +  +V A+E G LQGA  S+ ++   +G  + + L + F       P      PG  +   +VL++I+++ ARR+ ++ H
Sbjct:   47 ASRYSGLLTFAYATMQFAFAPVLGGLSDRYGRRPVLLFSLLGFGLDYILQGIAPTITLLFIGRIIAGITGASFTTASAYIADVSPPEKRAQ---NFGLIGAAFGMGFIIGPA--------------IGGLLGQYGSRIPFFVSAGLTLLNVIYGFFVLPESLKPENRRPFSWKRANPVGALAQIRRYPVIISLVASLVFIYIAGHAMQSTWTFITMEQFKWSEKTVGLSLAFIGLMIGIVQGGLSRVLIPK-----------LGQQRSVYVGLMMYAIGFVCFALATQSWMMFAFMVPYSLGGIAGPSLQGIISGQVPANEQGELQGALTSLISLTSIVGPLVMTYLFSFF-----TAPATPFYFPGAPFAAGAVLTIISLILARRTLSKQH 405          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A0R2SDF6_9FLAO (MFS transporter n=2 Tax=unclassified Cryomorphaceae TaxID=253244 RepID=A0A0R2SDF6_9FLAO)

HSP 1 Score: 186 bits (473), Expect = 7.230e-50
Identity = 128/382 (33.51%), Postives = 198/382 (51.83%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVF-TWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMV 1536
            AS   G++       +F   P+VGA SD  GR+P+LLFS      +YL +A +PTL  +FV RV+ G+     T  FA I+DVS     A    N GLVGAAFG+ FIIGP+               GG LG I   +P + +A L   ++ + ++V  E+LP ++R +F+ K A+PL  L   K  P +  L+ +++F+Y+AS +V  TW  F   +F W  +DIG+ L  VG+  AF QG+L+R  +P            +   +  +VG     +    +AL  + WMLYA ++  A G ++ P L   L   V  +E G LQGA +S+ +    +G  + +++ A F  + GAP       PG  ++  ++LS  ++V
Sbjct:   46 ASRYGGWLLFAYAFFQFLFAPLVGALSDRYGRRPVLLFSLLGFGLDYLVLAFAPTLAWLFVARVVSGIFGASFTTGFAYIADVSPPEKRAQ---NFGLVGAAFGLGFIIGPVT--------------GGLLGEIGPRVPFFVAAALTFLNMAYGYFVLPESLPADRRRAFEWKRANPLGTLVALKRYPRVVGLIGSLVFLYIASHAVQGTWSYFTIEKFNWSPKDIGLSLGAVGILSAFVQGFLIRKAIP-----------ALGPWRTLIVGMICNVVGLILFALVQQQWMLYAFLVPYAFGGLAGPALQGLLSNGVPENEQGELQGAMSSMMSATSIVGPPLMTTIFATFT-EAGAPVYF----PGAPFVAGALLSATSLV 394          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A7V4Z0D7_9BACT (MFS transporter n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4Z0D7_9BACT)

HSP 1 Score: 186 bits (472), Expect = 1.030e-49
Identity = 126/394 (31.98%), Postives = 207/394 (52.54%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYS---LPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMAS-GSVFTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARH 1563
            AS   G++      ++F   P++GA SD  GR+P++L +      +++   ++P++   F+ R+L G+T    T   A I+DVSK  + A    N G++GAAFG+ FIIGPL                GGL + HY     P + +A L   + ++ +++  E+L  E R +FD K A+P+ +L   +  P + SL  +++FIY+A   +  TW      +FGW + ++G  LA VGLAI   QG L R L+PK           + +  +  +G GL AI +  +A +S+ WM+YA ++  ++G ++ P L   +  +V A+E G LQGA  S+ +V   IG  + + L A F       P  +    G  +L+ +VLS+I+M+ A RS  +H
Sbjct:   45 ASRWGGWLMFTYAGMQFLFSPIIGALSDQYGRRPVILAALFAFAVDFVIQGLAPSIGWFFLGRILAGITGATFTAAGAYIADVSKPEERAQ---NFGIIGAAFGMGFIIGPLL---------------GGL-VSHYEGLRAPFFVAAGLALLNWLYGYFILPESLKPENRRAFDWKRANPVGSLLNLRRYPVILSLTASLMFIYVAGHANQSTWTYITMEKFGWDSREVGFSLAFVGLAIGVVQGGLTRILIPK-----------LGQRNSVFIGLGLYAIGFVLFAFASEGWMMYAFMIPFSLGGLAGPALQGIISNQVPANEQGELQGALTSLISVTSIIGPLLMTYLFAYF-----TAPQASVHFAGAPFLMGAVLSLISMLLAMRSLIKH 403          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A1J5RY08_9ZZZZ (Tetracycline resistance protein, class C n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RY08_9ZZZZ)

HSP 1 Score: 185 bits (470), Expect = 1.860e-49
Identity = 123/393 (31.30%), Postives = 206/393 (52.42%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARHHK 1569
            AS   G++      ++F   PV+G  SD  GR+P+LLFS      +Y+    +P +  +F+ R++ G+T G  T   A I+DVS     A    N G++GAAFG+ FIIGP+              +GG LG   + +P +A+A L   + ++ ++V  E+L  E R  FD K A+PL +L   K  P ++ L+ ++ F+Y+A+ +V  TW  +   +FGW    +G  L  VGL +   QG L+R ++PK           +   ++  +G GL AI +T +A +S+ WM++  ++  ++G I+ P L A +   V  +E G LQGA  S+ +    +G  + ++L + F  +    P+     PG   L  ++L+VI+ V+A ++  RH K
Sbjct:   45 ASRYGGWLMFAYAIMQFICAPVLGNLSDKYGRRPVLLFSLFGFGLDYILQGFAPNIGWLFIGRIIAGITGGSFTTAAAYIADVSTPEKRAQ---NFGMIGAAFGIGFIIGPV--------------LGGLLGHYGFRVPFFAAAALALLNWLYGYFVLPESLSKEHRREFDWKRANPLGSLLHLKKYPVVSGLVASITFLYIAAHAVQSTWTYYTMSKFGWDERLVGYSLGFVGLTVGIVQGGLIRIIIPK-----------LGNHKSVYIGLGLYAIGFTLFAFASQTWMMFVFMIPYSLGGIAGPSLQAIISKHVPPNEQGELQGALTSLMSATSIVGPLLMTNLFSYFTSE--KAPV---HFPGAAMLFGAMLTVISTVSAYKTL-RHEK 403          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A1I1T5P9_9BACT (MFS transporter, DHA1 family, tetracycline resistance protein n=2 Tax=Spirosoma TaxID=107 RepID=A0A1I1T5P9_9BACT)

HSP 1 Score: 185 bits (470), Expect = 2.410e-49
Identity = 124/390 (31.79%), Postives = 201/390 (51.54%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVF-TWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFAR 1560
            A+   G+++    A++F   P++G  SD  GR+P+LLFS      +Y+    +PT+  +FV R+L G+T    T   A I+D+S     A    N GL+GAAFGV FI+GP               +GG LG     +P + +A L   + ++  ++  E+LP E R  F+ + A+P+ +L      P +  L+ ++I IY+A  +V  TW  +   +F W  + +G+ LA +GL+ A  QG L R ++PK           + +E++  VG    AI +  +  +++ WM++A ++V A+G I+ P +   +  +V A+E G LQGA  S+ +     G  I ++L + F       P     LPG  + LASVL VI+   ARR F R
Sbjct:   46 AASWGGWLSFSYAAMQFIFSPILGGLSDRFGRRPVLLFSLLGFGIDYILQGFAPTIEWLFVGRMLAGVTGASFTTASAYIADISTPEKRAQ---NFGLIGAAFGVGFILGPA--------------MGGFLGQYGPRVPFFVAAGLSLLNFLYGFFILPESLPAENRRPFNWRRANPIGSLMNLGRYPVILGLVASLILIYIAGFAVQGTWTFYTMEKFKWDEKTVGLSLAAIGLSFAVVQGGLSRIIIPK-----------LGQERSVYVGLAFSAIGFALFGFANQSWMMFAFMIVYALGGIAGPSVQGIISNQVPANEQGELQGALTSLTSTTSIFGPLIMTNLFSYF-----TSPKSPTYLPGAPFFLASVLVVISAYLARRGFKR 402          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: UPI0019897D03 (TCR/Tet family MFS transporter n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=UPI0019897D03)

HSP 1 Score: 185 bits (469), Expect = 2.580e-49
Identity = 129/391 (32.99%), Postives = 198/391 (50.64%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSVFT-WFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFARH 1563
            AS   G +T     ++F   P+VG  SD  GR+P+LL S      +Y+    +PT+  +FV RVL G+T    T   A I+DVS     A    N GLVGAAFG  FI+GP               +GG LG     +P + +A     + ++ ++V  E+L  E R  FD K A+P+ +L   +  P + SL  +++ IY+A  +  + W  F   +FGW    +G+ LA VGL++   QG L R L+PK           +   +A  VG  L A+ +  +A +S+ WM+YA ++  A+G I+ P L   + ++V  +E G LQGA  S+ +V   IG  + + L + F       P      PG  +L+ +VLSV+++  ARRS  +H
Sbjct:   45 ASRWGGLLTFSYALMQFLCAPIVGGLSDQYGRRPVLLASLFGFGIDYIFQGFAPTIGWLFVGRVLAGVTGASFTTASAYIADVSTPEKRAQ---NFGLVGAAFGAGFILGPA--------------LGGFLGSYGARVPFFVAAGFSLVNCLYGYFVLPESLAPENRRPFDWKRANPVGSLAQLRRYPIILSLAASLVCIYIAGHATQSVWTFFTMEKFGWNETAVGLSLAFVGLSVGIVQGGLTRILIPK-----------LGPNRAVYVGLALYAVGFLLFAFASRGWMMYAFMVPYALGGIAGPSLQGIISSQVPPNEQGELQGALTSLISVTSIIGPLLMTGLFSYF-----TSPQAPIYFPGAAFLMGAVLSVLSVGLARRSLVKH 402          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A7V8W0L0_9BACT (TCR/Tet family MFS transporter n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7V8W0L0_9BACT)

HSP 1 Score: 185 bits (469), Expect = 3.050e-49
Identity = 123/386 (31.87%), Postives = 199/386 (51.55%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALRIFK--PNLASLLPAVIFIYMASGSV-FTWFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARR 1548
            A+   G++T     ++F   PV+G  SD  GR+P+LLFS      +Y+ ++ +PT+  +FV R++ G+T    T   A I+D+S  +D A    N G+VGAAFG+ FI+GP+              +GG LG     +P + +A L   + ++ ++V  E+LP E R SF+ K A+P  A R  K  P + +L  +   +YMA+ +V  TW  F   +F W  + +G+ L  VGL +   QG L+R++ PK           +  E++  +GFGL AI    +A +S+ WM++  ++   +G IS P L + +   V ++E G LQGA  S+ +    +   I +SL + +   G      +   PG  +LL S L   A + A R
Sbjct:   45 AAKYGGWLTFAYAIMQFLFAPVLGNLSDKYGRRPVLLFSLFGFGMDYIFLSFAPTIIWLFVGRIIAGITGASFTTATAYIADISAPADRAK---NFGMVGAAFGIGFIVGPV--------------IGGLLGQYGARVPFYFAACLTLLNWLYGYFVLPESLPIENRRSFEWKRANPFGAFRQLKKYPAVGALAISFFLVYMAAQAVQSTWAFFNIEKFKWSEKIVGLSLGAVGLLVGLVQGLLIRYINPK-----------IGNEKSIYIGFGLYAIGLILFAFASQGWMMFVFLVPYCLGGISGPALQSIITGHVPSNEQGELQGALTSLISATSILSPVIMTSLFSYYTSAG-----TSVYFPGAPFLLGSFLMFAAGILAYR 397          
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Match: A0A5A8AE37_9FLAO (TCR/Tet family MFS transporter n=3 Tax=Chryseobacterium TaxID=59732 RepID=A0A5A8AE37_9FLAO)

HSP 1 Score: 185 bits (469), Expect = 3.190e-49
Identity = 122/390 (31.28%), Postives = 206/390 (52.82%), Query Frame = 1
Query:  400 ASVQNGYMTVGKCALEFFVMPVVGACSDHVGRKPLLLFSAAVALAEYLAMAVSPTLPVIFVTRVLGGMTNGITTMIFAAISDVSKKSDEANVANNMGLVGAAFGVAFIIGPLEFNFYVPHPRPVLLVGGGLGMIHYSLPCWASAMLMAADVVFLHYVWQETLPTEQRTSFDIKNASPLPALR-IFK-PNLASLLPAVIFIYMASGSVFT-WFIFVDFRFGWKAEDIGVYLACVGLAIAFTQGYLMRHLVPKXXXXXXXXXXVVSEEQATVVGFGLRAIAYTGYALSSKPWMLYALIMVDAMGSISDPCLSAALVARVDAHEVGALQGAAASVKTVMQGIGSFIFSSLLARFIGQGGAPPLLNGRLPGGHWLLASVLSVIAMVAARRSFAR 1560
            A+   G+++      +F   PVVG  SD  GR+P++L S      +Y+ +A++PT+ ++FV RV+ G+T    T   A I+D+S   D A    N GL+GAAFG+ FIIGPL              +GG LG     +P +A+A+L   + ++ +++  E+L   +R  FD K A+P+ +L+ +FK P L+ L+  +  +Y+A  +V + W  F   +F W    +GV L  VGL +A  QG L+R   PK           + E ++  +G G+ AI    +A +++ WM++A+++   +G I  P L + +   V A+E G LQGA  S+ ++   IG  + +SL  +F  +  +      + PG  + LA +L  +++V    +F R
Sbjct:   47 AAKYGGWLSFAYAFTQFVFSPVVGNLSDKYGRRPIILISLFGFTVDYIFLALAPTIWLLFVGRVIAGITGASFTTASAYIADISTDEDRAK---NFGLIGAAFGLGFIIGPL--------------IGGALGHFGARMPFYAAAVLCLLNFLYGYFILPESLDKNKRREFDWKRANPIGSLKFLFKHPELSGLVATLFLVYVAGHAVQSNWSFFTMGQFKWTEFTVGVSLGVVGLLVALVQGVLIRWTAPK-----------LGEYKSIYIGLGMYAIGMLLFAFATEGWMMFAILIPYCLGGICGPSLQSVITKNVAANEQGELQGALTSLMSITSTIGPPLMASLYYQFSKEDSSL-----KFPGAPFFLAFILMSVSVVMTYFNFKR 403          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352280 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZBW6_9STRA0.000e+0100.00Noc2p family-domain-containing protein n=1 Tax=Tri... [more]
A0A6H5KR85_9PHAE1.150e-2228.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEQ5_ECTSI1.370e-2231.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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BLAST of jgi.p|Trimin1|352280 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZK48_9STRA0.000e+0100.00Major facilitator superfamily domain-containing pr... [more]
A0A173MDR5_9BACT1.370e-5233.76MFS transporter, DHA1 family, tetracycline resista... [more]
A0A1S2VPE9_9BACT1.030e-5131.38Tetracycline resistance MFS efflux pump n=1 Tax=Ar... [more]
A0A0R2SDF6_9FLAO7.230e-5033.51MFS transporter n=2 Tax=unclassified Cryomorphacea... [more]
A0A7V4Z0D7_9BACT1.030e-4931.98MFS transporter n=1 Tax=Bacteroidetes bacterium Ta... [more]
A0A1J5RY08_9ZZZZ1.860e-4931.30Tetracycline resistance protein, class C n=1 Tax=m... [more]
A0A1I1T5P9_9BACT2.410e-4931.79MFS transporter, DHA1 family, tetracycline resista... [more]
UPI0019897D032.580e-4932.99TCR/Tet family MFS transporter n=1 Tax=Sphingobact... [more]
A0A7V8W0L0_9BACT3.050e-4931.87TCR/Tet family MFS transporter n=1 Tax=Chitinophag... [more]
A0A5A8AE37_9FLAO3.190e-4931.28TCR/Tet family MFS transporter n=3 Tax=Chryseobact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_114contigContig_114:150907..153137 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352280|estExt_Genemark1.C_Ctg_1140020
BRITEko00000,ko03009
KEGG koko:K14833
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0008150,GO:0022613,GO:0030684,GO:0030686,GO:0030687,GO:0030689,GO:0030690,GO:0030691,GO:0031974,GO:0031981,GO:0032991,GO:0042254,GO:0042273,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071840,GO:1990904
Descriptionribosomal large subunit biogenesis
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5604@1|root,KOG2256@2759|Eukaryota
Evalue2.13e-23
Seed ortholog2880.D8LEQ5
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleolar complex protein 2
Ec32 orthologEc-26_000730.1
TranscriptId352602
TrackFilteredModels1
ProteinId352280
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352280gene_15055Tribonema minus UTEX_B_3156 geneContig_114 150907..153137 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15055_1exon_15055_1Tribonema minus UTEX_B_3156 exonContig_114 150907..153137 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15055CDS_15055Tribonema minus UTEX_B_3156 CDSContig_114 150907..153087 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_15055UTR3_15055Tribonema minus UTEX_B_3156 three_prime_UTRContig_114 153088..153137 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352280Trimin1|352280|estExt_Genemark1.C_Ctg_1140020Tribonema minus UTEX_B_3156 polypeptideContig_114 150907..153087 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15055 ID=mRNA_15055|Name=jgi.p|Trimin1|352280|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2231bp|location=Sequence derived from alignment at Contig_114:150907..153137+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCAAGCCCGCCAGCAAGCGCACCAAGAAGTTCCAGAAGAAGGGCGG
CCTCGGCGGCATCCAGAAGAACCTCGACAAGAAGAAGCAGGTCAAGGCGA
TCAAGCGCAAGCAGGCGGTGCGCGCGCAGACGCGAGAAGAAAAGGCTTCG
GAGGCGGAGCGCACGAGCGCCGCCGCCGGCGCTGCTGCCGCCGCGCAGCG
CGGCGCCGCGTCGCAGGCGCCGCCGCTGCCCGCCGCCGTCGACCTCGACG
AGTTCATGGAGTGTCGCTCCCTGTACGCAGCAGTTGAAGTTGGCGGCAGC
GGCGCAGAGGAGTACAGTGTGGAAATCGACTTTGCAGGCCTGGAGGAGGC
CCTTGGCGCTCGCCAGAGGAAGAAGAAACGGGCAAAGCCGGGGGCGCCAG
CAGCAGACGCGGCGGCGGCGGAGTTGACGGTGGAGGGCGTAGACAAGCTG
CTGGCGCGCGTCGCCGCCGACAGCGGCGGCGCCGCCGCCGCTGCTGCCGC
GCCGCTGACGTGGCTGGCGCACGCATTCCGCGCAGCAGTGCTCGGCGGCG
ATGCTGCAGCGGCGGACGCGCTGCCGGCGGCGCTGCGCGGCGCGCGCGGC
TCCGCTGCCGCCGCGCACCTCATCGGCGCGTGCCTCGACGCACTGCCGGC
GGCATTCGCAGCGCAGCTGCTGCCGCAAGCCGATGCGGCGGCGGCGGCAG
ATGGCGGCGACGGCGAGGCTGCTGCCGCCGGCGTGCGCGCCGCGTCGCGC
TCCGCCTTCCTGCAGCGCCACGCCAAGATGCCGCGGTCGGAGGCGTGGCC
GCGGCTCGCTGGCGCGCTGCGCGCATTCCTGGAGGCAGCGCCGCACGCGC
TGCTCAGCGCTGCCGGCGCCGCCACGGCGGAGGTCGCGGCGAAGGCGGAG
GCGGCCGCGCGCGCGGCGGCGCCGCTCATGATACCCTTCCCGGAGCTGGC
GCGCGCGGCGCTGCGCAGCGCGGCGGACGCGCTCGCGGCGGCGCGCAGCG
CGGCGGCGGCGGCGCGCGCGGCGGCGGTGCTGCGCGCCGTGGCGCTCTCG
CAGCCGCTGCCGCTGTTCCACACCGCCCTGCGCGCCGCGTACCGCGCCTA
TCGCCTGGCGGTGGAGCGGCTGGACGGCAGCAGCGGCAGCGGCGGCGGCG
GCGCTGCGGCGGTGGCGACGATGGCGGCGCTGCGCACGGGCGTCGCGGAG
CTGTACCGACACGAGCCGGCGGCGTCGCAGCTGCACGCCTTCGTGTTCCT
GCACACCATGGCGGCGACGGTGGAGGCAGCGGAAGAGGGGGGGAAGGCGG
GGGAGGCGGCGACCGTGGAGGTGCGCAGCTGGCCGTTCCTGCAGTGCGTG
CTGCTGTGGACGCGCGTCGTCGCCGCCGGCTGCAGCAGCGGCGGCGGCGG
CGGCGGCACGGGCGGTGGCGGCGGCGGCAGCGGCAGCGAGGCGCCCATGG
CGCCGCTCGTGGCGCCGCTGGCGCAGATTATAGAGCGAGCCGCGCGCGTT
GCCCCCGGCGCGCCGAGCCTGCCGCACCGCCTCGCGCTGGCGCGCGCTGC
GCAGGACCTCGCCGCCGCCGCCGGCGTGTTCCTGCCGGCGGCGTGGATGG
CGATGGGCGCGCTGGAGGTGGACTCGCTGTACGCCGTACGCTCCGCAGCA
GCAGCAGCAGCGGCGCCGAATGGCAGCGGCGGCAGCGGCGGCGGCGGAGG
CTTCGCGCTGGCGGCGGTGGCGCGCCTGTCGCGCGACGAGCTGCGCGACG
CCGCCGCGCAGCGCGCGCTGCTGGCGGAGGCGGCGGCGCTGCTCGCGCGC
GAGGCGGCGCTGTACGCGCAGTCGCCCGCGCACCCCGACTACGCGGGGCG
CTGCGCGCGCGCGCTCACCGCTGCGGCGGCGCGGCTCACCGGCGGCGGCG
GCGGCGGCGGGCGCGCCGACGTCGCCGCCGCCATGCGCGCGGCGGCGGAG
GCGATCGAGCGGCGCGCGCGCGACGTGGAGAGGGCGCGGTCGCGGCTGTC
TACGCACCCCGCAAATGTGACCGCGCTGGAGGCGCTGCGGCCGATCGACG
GCGCGCCGGCGGCGGCGCGGCTGGCGCTGCTGGACGCGCGCGCAGGTGGC
GGCAGCGGCGGCGGCAGCGGCGGACAGAAGAAGCAGAAGGGGAAGGCGGG
AGCACCGCCTGCACGGGCATTGAGACAGTAGTGCCGGCGTACTGTTGTAA
ACCAAGTTAAATGCAAAGAGTACATCACTGC
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protein sequence of jgi.p|Trimin1|352280

>Trimin1|352280|estExt_Genemark1.C_Ctg_1140020 ID=Trimin1|352280|estExt_Genemark1.C_Ctg_1140020|Name=jgi.p|Trimin1|352280|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=727bp
MGKPASKRTKKFQKKGGLGGIQKNLDKKKQVKAIKRKQAVRAQTREEKAS
EAERTSAAAGAAAAAQRGAASQAPPLPAAVDLDEFMECRSLYAAVEVGGS
GAEEYSVEIDFAGLEEALGARQRKKKRAKPGAPAADAAAAELTVEGVDKL
LARVAADSGGAAAAAAAPLTWLAHAFRAAVLGGDAAAADALPAALRGARG
SAAAAHLIGACLDALPAAFAAQLLPQADAAAAADGGDGEAAAAGVRAASR
SAFLQRHAKMPRSEAWPRLAGALRAFLEAAPHALLSAAGAATAEVAAKAE
AAARAAAPLMIPFPELARAALRSAADALAAARSAAAAARAAAVLRAVALS
QPLPLFHTALRAAYRAYRLAVERLDGSSGSGGGGAAAVATMAALRTGVAE
LYRHEPAASQLHAFVFLHTMAATVEAAEEGGKAGEAATVEVRSWPFLQCV
LLWTRVVAAGCSSGGGGGGTGGGGGGSGSEAPMAPLVAPLAQIIERAARV
APGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAA
AAAAAPNGSGGSGGGGGFALAAVARLSRDELRDAAAQRALLAEAAALLAR
EAALYAQSPAHPDYAGRCARALTAAAARLTGGGGGGGRADVAAAMRAAAE
AIERRARDVERARSRLSTHPANVTALEALRPIDGAPAAARLALLDARAGG
GSGGGSGGQKKQKGKAGAPPARALRQ*
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mRNA from alignment at Contig_114:150907..153137+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15055 ID=mRNA_15055|Name=jgi.p|Trimin1|352280|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2231bp|location=Sequence derived from alignment at Contig_114:150907..153137+ (Tribonema minus UTEX_B_3156 )
ATGGGCAAGCCCGCCAGCAAGCGCACCAAGAAGTTCCAGAAGAAGGGCGG CCTCGGCGGCATCCAGAAGAACCTCGACAAGAAGAAGCAGGTCAAGGCGA TCAAGCGCAAGCAGGCGGTGCGCGCGCAGACGCGAGAAGAAAAGGCTTCG GAGGCGGAGCGCACGAGCGCCGCCGCCGGCGCTGCTGCCGCCGCGCAGCG CGGCGCCGCGTCGCAGGCGCCGCCGCTGCCCGCCGCCGTCGACCTCGACG AGTTCATGGAGTGTCGCTCCCTGTACGCAGCAGTTGAAGTTGGCGGCAGC GGCGCAGAGGAGTACAGTGTGGAAATCGACTTTGCAGGCCTGGAGGAGGC CCTTGGCGCTCGCCAGAGGAAGAAGAAACGGGCAAAGCCGGGGGCGCCAG CAGCAGACGCGGCGGCGGCGGAGTTGACGGTGGAGGGCGTAGACAAGCTG CTGGCGCGCGTCGCCGCCGACAGCGGCGGCGCCGCCGCCGCTGCTGCCGC GCCGCTGACGTGGCTGGCGCACGCATTCCGCGCAGCAGTGCTCGGCGGCG ATGCTGCAGCGGCGGACGCGCTGCCGGCGGCGCTGCGCGGCGCGCGCGGC TCCGCTGCCGCCGCGCACCTCATCGGCGCGTGCCTCGACGCACTGCCGGC GGCATTCGCAGCGCAGCTGCTGCCGCAAGCCGATGCGGCGGCGGCGGCAG ATGGCGGCGACGGCGAGGCTGCTGCCGCCGGCGTGCGCGCCGCGTCGCGC TCCGCCTTCCTGCAGCGCCACGCCAAGATGCCGCGGTCGGAGGCGTGGCC GCGGCTCGCTGGCGCGCTGCGCGCATTCCTGGAGGCAGCGCCGCACGCGC TGCTCAGCGCTGCCGGCGCCGCCACGGCGGAGGTCGCGGCGAAGGCGGAG GCGGCCGCGCGCGCGGCGGCGCCGCTCATGATACCCTTCCCGGAGCTGGC GCGCGCGGCGCTGCGCAGCGCGGCGGACGCGCTCGCGGCGGCGCGCAGCG CGGCGGCGGCGGCGCGCGCGGCGGCGGTGCTGCGCGCCGTGGCGCTCTCG CAGCCGCTGCCGCTGTTCCACACCGCCCTGCGCGCCGCGTACCGCGCCTA TCGCCTGGCGGTGGAGCGGCTGGACGGCAGCAGCGGCAGCGGCGGCGGCG GCGCTGCGGCGGTGGCGACGATGGCGGCGCTGCGCACGGGCGTCGCGGAG CTGTACCGACACGAGCCGGCGGCGTCGCAGCTGCACGCCTTCGTGTTCCT GCACACCATGGCGGCGACGGTGGAGGCAGCGGAAGAGGGGGGGAAGGCGG GGGAGGCGGCGACCGTGGAGGTGCGCAGCTGGCCGTTCCTGCAGTGCGTG CTGCTGTGGACGCGCGTCGTCGCCGCCGGCTGCAGCAGCGGCGGCGGCGG CGGCGGCACGGGCGGTGGCGGCGGCGGCAGCGGCAGCGAGGCGCCCATGG CGCCGCTCGTGGCGCCGCTGGCGCAGATTATAGAGCGAGCCGCGCGCGTT GCCCCCGGCGCGCCGAGCCTGCCGCACCGCCTCGCGCTGGCGCGCGCTGC GCAGGACCTCGCCGCCGCCGCCGGCGTGTTCCTGCCGGCGGCGTGGATGG CGATGGGCGCGCTGGAGGTGGACTCGCTGTACGCCGTACGCTCCGCAGCA GCAGCAGCAGCGGCGCCGAATGGCAGCGGCGGCAGCGGCGGCGGCGGAGG CTTCGCGCTGGCGGCGGTGGCGCGCCTGTCGCGCGACGAGCTGCGCGACG CCGCCGCGCAGCGCGCGCTGCTGGCGGAGGCGGCGGCGCTGCTCGCGCGC GAGGCGGCGCTGTACGCGCAGTCGCCCGCGCACCCCGACTACGCGGGGCG CTGCGCGCGCGCGCTCACCGCTGCGGCGGCGCGGCTCACCGGCGGCGGCG GCGGCGGCGGGCGCGCCGACGTCGCCGCCGCCATGCGCGCGGCGGCGGAG GCGATCGAGCGGCGCGCGCGCGACGTGGAGAGGGCGCGGTCGCGGCTGTC TACGCACCCCGCAAATGTGACCGCGCTGGAGGCGCTGCGGCCGATCGACG GCGCGCCGGCGGCGGCGCGGCTGGCGCTGCTGGACGCGCGCGCAGGTGGC GGCAGCGGCGGCGGCAGCGGCGGACAGAAGAAGCAGAAGGGGAAGGCGGG AGCACCGCCTGCACGGGCATTGAGACAGTAGTGCCGGCGTACTGTTGTAA ACCAAGTTAAATGCAAAGAGTACATCACTGC
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Coding sequence (CDS) from alignment at Contig_114:150907..153137+

>mRNA_15055 ID=mRNA_15055|Name=jgi.p|Trimin1|352280|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2181bp|location=Sequence derived from alignment at Contig_114:150907..153137+ (Tribonema minus UTEX_B_3156 )
ATGGGCAAGCCCGCCAGCAAGCGCACCAAGAAGTTCCAGAAGAAGGGCGG
CCTCGGCGGCATCCAGAAGAACCTCGACAAGAAGAAGCAGGTCAAGGCGA
TCAAGCGCAAGCAGGCGGTGCGCGCGCAGACGCGAGAAGAAAAGGCTTCG
GAGGCGGAGCGCACGAGCGCCGCCGCCGGCGCTGCTGCCGCCGCGCAGCG
CGGCGCCGCGTCGCAGGCGCCGCCGCTGCCCGCCGCCGTCGACCTCGACG
AGTTCATGGAGTGTCGCTCCCTGTACGCAGCAGTTGAAGTTGGCGGCAGC
GGCGCAGAGGAGTACAGTGTGGAAATCGACTTTGCAGGCCTGGAGGAGGC
CCTTGGCGCTCGCCAGAGGAAGAAGAAACGGGCAAAGCCGGGGGCGCCAG
CAGCAGACGCGGCGGCGGCGGAGTTGACGGTGGAGGGCGTAGACAAGCTG
CTGGCGCGCGTCGCCGCCGACAGCGGCGGCGCCGCCGCCGCTGCTGCCGC
GCCGCTGACGTGGCTGGCGCACGCATTCCGCGCAGCAGTGCTCGGCGGCG
ATGCTGCAGCGGCGGACGCGCTGCCGGCGGCGCTGCGCGGCGCGCGCGGC
TCCGCTGCCGCCGCGCACCTCATCGGCGCGTGCCTCGACGCACTGCCGGC
GGCATTCGCAGCGCAGCTGCTGCCGCAAGCCGATGCGGCGGCGGCGGCAG
ATGGCGGCGACGGCGAGGCTGCTGCCGCCGGCGTGCGCGCCGCGTCGCGC
TCCGCCTTCCTGCAGCGCCACGCCAAGATGCCGCGGTCGGAGGCGTGGCC
GCGGCTCGCTGGCGCGCTGCGCGCATTCCTGGAGGCAGCGCCGCACGCGC
TGCTCAGCGCTGCCGGCGCCGCCACGGCGGAGGTCGCGGCGAAGGCGGAG
GCGGCCGCGCGCGCGGCGGCGCCGCTCATGATACCCTTCCCGGAGCTGGC
GCGCGCGGCGCTGCGCAGCGCGGCGGACGCGCTCGCGGCGGCGCGCAGCG
CGGCGGCGGCGGCGCGCGCGGCGGCGGTGCTGCGCGCCGTGGCGCTCTCG
CAGCCGCTGCCGCTGTTCCACACCGCCCTGCGCGCCGCGTACCGCGCCTA
TCGCCTGGCGGTGGAGCGGCTGGACGGCAGCAGCGGCAGCGGCGGCGGCG
GCGCTGCGGCGGTGGCGACGATGGCGGCGCTGCGCACGGGCGTCGCGGAG
CTGTACCGACACGAGCCGGCGGCGTCGCAGCTGCACGCCTTCGTGTTCCT
GCACACCATGGCGGCGACGGTGGAGGCAGCGGAAGAGGGGGGGAAGGCGG
GGGAGGCGGCGACCGTGGAGGTGCGCAGCTGGCCGTTCCTGCAGTGCGTG
CTGCTGTGGACGCGCGTCGTCGCCGCCGGCTGCAGCAGCGGCGGCGGCGG
CGGCGGCACGGGCGGTGGCGGCGGCGGCAGCGGCAGCGAGGCGCCCATGG
CGCCGCTCGTGGCGCCGCTGGCGCAGATTATAGAGCGAGCCGCGCGCGTT
GCCCCCGGCGCGCCGAGCCTGCCGCACCGCCTCGCGCTGGCGCGCGCTGC
GCAGGACCTCGCCGCCGCCGCCGGCGTGTTCCTGCCGGCGGCGTGGATGG
CGATGGGCGCGCTGGAGGTGGACTCGCTGTACGCCGTACGCTCCGCAGCA
GCAGCAGCAGCGGCGCCGAATGGCAGCGGCGGCAGCGGCGGCGGCGGAGG
CTTCGCGCTGGCGGCGGTGGCGCGCCTGTCGCGCGACGAGCTGCGCGACG
CCGCCGCGCAGCGCGCGCTGCTGGCGGAGGCGGCGGCGCTGCTCGCGCGC
GAGGCGGCGCTGTACGCGCAGTCGCCCGCGCACCCCGACTACGCGGGGCG
CTGCGCGCGCGCGCTCACCGCTGCGGCGGCGCGGCTCACCGGCGGCGGCG
GCGGCGGCGGGCGCGCCGACGTCGCCGCCGCCATGCGCGCGGCGGCGGAG
GCGATCGAGCGGCGCGCGCGCGACGTGGAGAGGGCGCGGTCGCGGCTGTC
TACGCACCCCGCAAATGTGACCGCGCTGGAGGCGCTGCGGCCGATCGACG
GCGCGCCGGCGGCGGCGCGGCTGGCGCTGCTGGACGCGCGCGCAGGTGGC
GGCAGCGGCGGCGGCAGCGGCGGACAGAAGAAGCAGAAGGGGAAGGCGGG
AGCACCGCCTGCACGGGCATTGAGACAGTAG
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