mRNA_14749 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351318
Unique Name	mRNA_14749
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YRK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK9_9STRA)

HSP 1 Score: 798 bits (2060), Expect = 1.100e-290
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 1

Query:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 1287
            MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR
Sbjct:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 429

[Close]

BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.310e-26
Identity = 65/97 (67.01%), Postives = 73/97 (75.26%), Query Frame = 1

Query: 1000 NAEHLAISQLAITSEPR-WVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 1287
            +A   A+S   I    R W T  V  T LDRLPPTEFR LSDPLLHQV+++VEQ Q+EME PLVYRDK YL+PWF EELK LQRKV LLYLLL+VHR
Sbjct:  442 SARRAAVSSRWILLTGRMWRTLAVAITELDRLPPTEFRLLSDPLLHQVLVVVEQTQIEMESPLVYRDKEYLNPWFREELKALQRKVQLLYLLLIVHR 538

[Close]

BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YTV4_9STRA (ATPase_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.970e-15
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 1

Query:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPE--GKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVL 327
            ++PL+NGLP DRQ+S+ A  AA+ ST K E D+  +   K+T +  D IKAQQ  DK   Q  QQ   +S+     SI++VI++Y K+L++W+ AR AKEL+  + +WPV+
Sbjct:   86 VAPLINGLPADRQQSIDATAAAFHSTFKVEQDMDMKRFSKVTATLWDAIKAQQEQDKK--QHCQQEDPLSKS---SSITQVIEMYEKILQQWEWARQAKELTQVKHQWPVV 191

[Close]

BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YMF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMF2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.370e-8
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1

Query:  379 QLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQE 582
            Q AAG+ AL ALVKA+ L LRPYS WA D+ + A+G      VVTA +P DL+ MRV+  +L+  L E
Sbjct:  247 QEAAGEQALRALVKAHRLGLRPYSEWALDIPREAYGLGAPVDVVTASTPADLYCMRVMHSELQRTLDE 314

[Close]

BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835Z2D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.270e-5
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 1

Query:  271 KLARDAKELSDNQRRWPVLAEAREFLETQLTADPAK----QLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWG--ASDDTRVVTAPSPIDLHWMRVIRPQLELKLQE 582
            K A  A  L D++     L + +  L   ++   AK    Q AAG  A+AAL++A +LS RPYS W++D+   A+G  +SD + ++TA S ++L+ MR +R  LE  + E
Sbjct:  250 KFADAALLLLDSEHNVATLKDMKMRLGRHISTAVAKGHNAQAAAGGQAVAALIRANILSQRPYSEWSQDIPPDAYGPPSSDPSTIITAYSAVNLYCMRGLREDLEKTINE 359

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351318 vs. uniprot

BLAST of jgi.p|Trimin1|351318 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835YRK9_9STRA	1.100e-290	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIN7_9STRA	4.310e-26	67.01	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTV4_9STRA	5.970e-15	44.14	ATPase_2 domain-containing protein n=1 Tax=Tribone...	[more]
A0A835YMF2_9STRA	4.370e-8	51.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2D0_9STRA	1.270e-5	36.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_87	contig	Contig_87:173757..184368 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351318\|estExt_Genemark1.C_Ctg_870023
Hectar predicted targeting category	other localisation
TranscriptId	351640
Track	FilteredModels1
ProteinId	351318

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351318	gene_14749	Tribonema minus UTEX_B_3156	gene	Contig_87 173757..184368 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351318	Trimin1\|351318\|estExt_Genemark1.C_Ctg_870023	Tribonema minus UTEX_B_3156	polypeptide	Contig_87 173757..184368 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14749_9	exon_14749_9	Tribonema minus UTEX_B_3156	exon	Contig_87 173757..173876 -
exon_14749_8	exon_14749_8	Tribonema minus UTEX_B_3156	exon	Contig_87 174820..174909 -
exon_14749_7	exon_14749_7	Tribonema minus UTEX_B_3156	exon	Contig_87 177285..177407 -
exon_14749_6	exon_14749_6	Tribonema minus UTEX_B_3156	exon	Contig_87 178985..179080 -
exon_14749_5	exon_14749_5	Tribonema minus UTEX_B_3156	exon	Contig_87 180132..180285 -
exon_14749_4	exon_14749_4	Tribonema minus UTEX_B_3156	exon	Contig_87 180938..181044 -
exon_14749_3	exon_14749_3	Tribonema minus UTEX_B_3156	exon	Contig_87 181664..181906 -
exon_14749_2	exon_14749_2	Tribonema minus UTEX_B_3156	exon	Contig_87 183596..183625 -
exon_14749_1	exon_14749_1	Tribonema minus UTEX_B_3156	exon	Contig_87 184042..184368 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14749	CDS_14749	Tribonema minus UTEX_B_3156	CDS	Contig_87 184042..184368 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_87:173757..184368-
coding sequence from alignment at Contig_87:173757..184368-

spliced messenger RNA

>mRNA_14749 ID=mRNA_14749|Name=jgi.p|Trimin1|351318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1290bp|location=Sequence derived from alignment at Contig_87:173757..184368- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCCACTCGTCAATGGCCTGCCTGACGACCGCCAGCGCTCACTCAC
GGCCGCATTTGCTGCTTGGGCTTCAACGATCAAGTTTGAGGTGGATGTGA
CGCCTGAGGGGAAGATTACGTTTTCGTTCGGGGATGGCATCAAAGCGCAG
CAGGCATCAGACAAGCTGCTGCTGCAGCAGCCGCAACAGCGATCGGAGAT
GTCGCAAGAGCCACCACCAGACAGCATATCGCGAGTCATCGACATCTACG
CGAAGGTACTCGAGGAGTGGAAGCTGGCGCGCGACGCGAAGGAGCTTTCA
GACAACCAGCGGCGGTGGCCCGTGCTGGCGGAGGCCAGGGAGTTTCTTGA
GACCCAGCTCACTGCTGACCCAGCCAAGCAGTTGGCAGCTGGCAAGCCTG
CGCTGGCCGCACTCGTTAAGGCATATATGCTCAGCCTGCGGCCGTACAGC
ACATGGGCACGGGACGTTGACAAGAGGGCGTGGGGGGCGTCCGATGACAC
CAGAGTGGTGACGGCACCTTCGCCTATCGACCTGCACTGGATGCGCGTGA
TCCGCCCACAGCTGGAGCTTAAGTTGCAGGAGGGGCAGGCGCTCAGTCAG
GTGGCAGCACTGAGAGAGGCCAGGAAAGTGCTGCAGGACGAGACGAAGCA
GCTGCACAAGCAGGTGCAGGAGAAGGAGCTGCTGCTGCTCAAGAGGAAGG
ACCAGCATGGCGCACGCCTGCGTGAGGAGGTGGCGCGGCGGCGTGAAGGC
CGCGTCGCGGTGGCATTGGTGCCGCCGACCGCTGCACTGCCGCCTGCGGC
GCTTGTCCAGGCGCTGGTGCTGGTTGCCGCCGCGTGCGCGCCGCTTACGG
CTTGCGGGCGTGTGCCTGGGGATGCAAGCGGGAGCCTCGCACACAAGTTC
ACGGGGGATGGCGCATTCTTCGCAAGCGCTGGTGGCGCGGCGCGACGAAA
GCACTTGCCACTGCTGGAGGAGGAGGAGCAGTGCAGGGTATGGCAGGGGA
ATGCGGAGCACCTGGCCATCAGTCAGCTCGCCATCACGAGTGAGCCGAGG
TGGGTCACTAAGGTGGTGGACGAGACAGGACTCGATCGGCTGCCGCCGAC
TGAGTTTCGGCAGCTGAGCGATCCCCTCCTGCATCAAGTGATCATTCTGG
TGGAGCAGGCGCAAATGGAGATGGAAGGTCCGCTTGTGTACCGCGACAAA
GCGTACCTGGATCCATGGTTCTGCGAGGAACTGAAGATGCTTCAGCGCAA
GGTGTACCTCCTGTACCTGCTGCTCCTAGTACACCGGTGA

protein sequence of jgi.p|Trimin1|351318

>Trimin1|351318|estExt_Genemark1.C_Ctg_870023 ID=Trimin1|351318|estExt_Genemark1.C_Ctg_870023|Name=jgi.p|Trimin1|351318|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=430bp
MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQ
QASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELS
DNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYS
TWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQ
VAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREG
RVAVALVPPTAALPPAALVQALVLVAAACAPLTACGRVPGDASGSLAHKF
TGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPR
WVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDK
AYLDPWFCEELKMLQRKVYLLYLLLLVHR*

mRNA from alignment at Contig_87:173757..184368-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14749 ID=mRNA_14749|Name=jgi.p|Trimin1|351318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10612bp|location=Sequence derived from alignment at Contig_87:173757..184368- (Tribonema minus UTEX_B_3156 )
ATGTCTCCACTCGTCAATGGCCTGCCTGACGACCGCCAGCGCTCACTCAC
GGCCGCATTTGCTGCTTGGGCTTCAACGATCAAGTTTGAGGTGGATGTGA
CGCCTGAGGGGAAGATTACGTTTTCGTTCGGGGATGGCATCAAAGCGCAG
CAGGCATCAGACAAGCTGCTGCTGCAGCAGCCGCAACAGCGATCGGAGAT
GTCGCAAGAGCCACCACCAGACAGCATATCGCGAGTCATCGACATCTACG
CGAAGGTACTCGAGGAGTGGAAGCTGGCGCGCGACGCGAAGGAGCTTTCA
GACAACCAGCGGCGGTGGCCCGTGCTGGTCATCGATGAGATTCACGAAAT
CACCAAATGGGGGGACGAGCATGAGGCTGATCGGCAAAAACGCTGCTTCA
ATTCTTCGTCAGAATCACAAAGCAGGAGAGCTTATGCCATGTGCTGCTGA
TCACCTCCGCTTATGGCTTCCAGAGCTGGCTGTCCAGAGGTGAGTGTCAG
ACAACACACAACTCATTTCACAATCGTACAATGTCTATCGGTCCCGTCTA
TGTGAGGACTTGGGTGGCTGTATACTGCACTTTATTGGGCGACGCTGTCT
GCAGCCGCAATCAAACATTTGTATTCGCGATGACCCACTCAGCGTACCAA
CTCATATTGTGTCTCCCGCTACTTCATCTTGTTGTCACAGAGATTGGTGC
AAAGTTCTTGGTGCCACTGGTCATTGGTGATTTCCCTGACCAGGCGGAGG
CCAGGGAGTTTCTTGAGACCCAGGTACCTGGCATAGGCCTTATGTTTGTG
CCCCACACCTAAAGCCATTGCAATTCATGATATCTGCATCATGCGATGCA
TCATGCGCAATCGCGTGGCTGACGCGCTTCTAGTTACTTCTGAAGTATGT
GATTTGGCACCACACGAATCTGACTTTCTCTTGCCAGTTTCTTTTGTGGT
CTGAGAGATTTTATAAGCTCTTCTGGTACAGGATACGCAAGTCCTATGCC
GCTTTGGTTCATAAAGTCAAGCGACACCCGCACATTGAGCTATGATTGTG
GCAGCTGTGAGCCATGTGCTTGGCACCTGTCTTCACAGTCAGGGTTGGCA
AATCAGTATGTGGTACTTCTATATCATACTGCATGCGGGTATATACGGGT
CAAATACTAGCATCTGACCTGCCGAACAGCCTCACCAGTTACGCATTTCA
CGTACGTTTCACGTACGTATATGCTGAAGTACGGGTACTTGGGAGTATAA
TGCTAGTGTCTGAAACTCAGAATACGCTTTTTTTTGCCAACCCTATTTAT
AGTGTGCAAGGTTGCAGGACAGAGTCTGATCAGCCTCGTGTTGTTTGATG
CATGCAATACTCGCTACTTTTCTTTGTAGCAGCAGAGGCTGATGCACCAT
ACATCTACGGGCGTTTGCAGGTTTGCGGCGGCAACGCTGGAGCCCTCTGC
CTCACGGCTCTGGATTACAAATCTCAGTTAGCCGAGGAACGCAATTGGTC
ATCAGGTGCGGTCATGTAGTGCGGTTGTACCATACCGCATGGGATCTAGC
AGACCCTCTGGTTGTGTAGTGGGCTTGTCACACTTAGGTGATATGAGATG
AAGACAGCTCAGAATCGATATTTGCTGCTGTGTCACCTCATTCCACCTTG
CCACAGGCATTGCGTTAAAATCAGTGTGTGCGCTCGCTAATTTTGCAGAA
TTTCGGCAAGGCATTATTTATTGCTGTCAAGGAATGCGTCACAAATTCGT
AGCAAATGTGGAGCCTCATGACCTACTTGCGGCTGTGGCAACATTGGCGA
TGTCCGGTGTAGGGTCGCCTGAACATGTTCTAGGTAGTGGTCGGGAAAGC
CATGTTCATTAGCCATGGGAAAATTCCTTCAGTAAGAACACATGACATCG
ATGGTACCTGTCGGCCTTGACCTAAGGCAGCATAGAGAGCAATTGCATCT
GCCTTCACACCTTGCACTTCGCCGGTATCTTGCTGGGCTTGACCTCAGAT
TGAGTTAGTTGAGCAACCTCTGAGCAGGGCCTTGTTGGAAACGTACAACA
AACTCCGTGACGCTCTTGACTTATGGTCATCGTGTGCCTTGAGGCTTTCA
GACATGTTAGGGCTCATGCTGGAAAGAGAGCCATGTGACAGTTCATGCAT
TTTGTTTTGGCTTCACTGGTTCCCATTGCTCAGCTTGACTGCATATTTGC
ACTGCAAGTTACAGAACAGTGTCTTGACGTTACAGCTGCCGCTACATGTG
CTTGTATTCATCAAAGACATGTCATGATCTCTCTGCTCTCCATGTCAGCC
CTGGCAACGGCTACGCTGACCACAGCGAGCGAAATAGGGGATGCAATGGA
CGGCGCGCCAGGCTGGACCGCTGCCCAATTTGCAGCTGCCTCACTGGAGT
TACTGAGCAACCCATACCACGCAGTGCCACAGCGTGAAATGGAGGTGCTG
CTTGGGCGTCAGCTCACTGCTGACCCAGCCAAGCAGTTGGCAGCTGGCAA
GCCTGCGCTGGCCGCACTCGTTAAGGCATATATGCTCAGCCTGCGGCCGT
ACAGCACATGGGCACGGGACGTTGACAAGAGGGCGTGGGGGGCGTCCGAT
GACACCAGAGTGGTGACGGCACCTTCGCCTATCGACCTGCACTGGATGCG
CGTGATCCGCCCACAGCTGGAGCTTAAGTTGCAGGAGGGGCAGGCGCTCA
GTCAGGTAGCTCATCAGCAAGCTATGTTCGCAGAGAAGATTATCGTTCGA
CGTTCTGGCACAGGCCTACCCCAGATTTTGACTTGTAGAACCAGCTATCA
TCGTTTTTGCTTGATTTATTATGCATACAGTGGCAATACCGTATTCGCCC
GTGGATAGCCTTCCCCCACCTTGAATAGCTTGGGGGGGGGCTAGTTGGCT
GAATAGCCCCCCCAAGATATCGATTATTTGATGCGCAGGTGGCTTGCATG
CAATAGCCCAGGGGGGCGGCCCGGGGGGGCGTTGAATAGCGCGGGGGGGG
GGGGAGAGAGAGATGAAAGTGGGTGACGTTTTCCGCTCTCCTTAAGGACC
CTCGCCCGGCGGTGGCATTTGGGCCACTTTTTTCCTAGTGTCTGTGGGGC
TTTATAACAACCTTGTGGTGCCTGATATCGATGCATATGCATGTGGCACA
GCAGCAAGCAGCACACTAGCAGCAGGCAGGGGCGGTGGCGGTGGGGCCAC
CAGTGGCACATGTGGCACTGAAAAAATGTTGCTTATACAATGAAATCCAC
TCAACCATGTTCGGCATCATGACGACCAAGAGAAGGGAGTCTTTCAATCT
CATGATGCCGCGGCCGCTGCCGAGGTGGCAGCACTGAGAGAGGCCAGGAA
AGTGCTGCAGGACGAGACGAAGCAGCTGCACAAGCAGGTGCAGGAGAAGG
AGCTGCTGCTGCTCAAGAGGAAGGACCAGCAGTAGCAGCGTCTGGCAGAC
CATTGCCATCTACACTACTGCTACAGTGGGTCATTGAGGGGATCGTGTGT
CTTAGAAGGTAGCATACCTGAGGGTGCAGGGCAACTTGCAGGGGGGGATG
TTGAAGAATAGCACAATGATCCAAGAAGCGGCAAGGCGAGGAACTGATGC
TATTTAGGAGGCAGCATCAGCAGCAGTACTGTTAGGCGCACCATGTCAGC
CACTACTGTTGCATTCCTTGGAAGGGGCGGAAGGGGAGAAGGGGGGCATG
TGGGTCGCTTGCTGGACAGCATACATATTGATGGCTGTGTGCACCCATGA
GTGCCATGCACAGTTCTCGGATATGTGTCAGAAGCTCTGCAGTAGTACAA
ATGGCGGCGGCGGCGTTTGAGTGGTTGTCGTTGCGACACTTTCAGACTGT
CATACGACATGCAGATTCCTTACAGCTAGATGCCAATCATCTGGGCTTTT
TTGCGCCCTGAGCGAGAATTAATGAAAAGTACAAATGCACATACATTGTG
TGGCCTGTTCTCTGTGCTTGAGCATTATCTTCAGGTTCTTGCCTCGAGAT
CTCTCTGGTGAGCTGCTGTGATTCCGCAAATGTTAACATTTGCACATGCG
TGATTTCATTGCTTGCTTAAACACTGTCCTCAGTGGCGCACGCCTGCGTG
AGGAGGTGGCGCGGCGGCGTGAAGGCCGCGTCGCGGTGGCATTGGTGCCG
CCGACCGCTGCACTGCCGCCTGCGGCGCTTGTCCAGGCGCTGGTGCTGGT
TGCCGCCGCGTGCGCGCCGCTTACGGCTTGCGGGCGTGTACGCCGCCATC
ACAGTGGACACATTCAAAGCGGGCGCAGAGCACGGCTGCAGCAACGGCGG
CAGCATGACAGCAGCGGAGCGTGCGGCACAGCGCTGCTGGCCATCCTGCG
GTTATCGTATTGCCTGCCGTTCCTGACAGTGTGCATGTGTCCAGCCGCAT
ATGCCCGAGCAAGGGTGCTTTATTGTAATGCATGAGTTCCTAGGTGAATT
GATCATAACCTGTCAGTGAAAACCTACATACCAAGTCGTGACCAGCGCTC
TGGGTAACTGCCGAATTCACCCGTGCGTACGTACGACTGTTGAACGTTCA
CACGGGGGTCATGCAACCGAAAACAAAACTAAAAAAACACACACAAACAC
ACACACAACACACACACACAACACAACACAACACAACACAAAAACAACAA
CACAACACGACGACACGACACGCCGTGCACTCACGCTGAATGGCCATGAT
CGTTCGGGTGGTGTACACGTTGATACTACTGCCAGCGGCAATCGCACATT
TACTTCCACCTTCGTTCGACTATTGCACCATGGACAGGTATTTGCAAGCT
TATCCTACCGCCAGGTACGTACCGCCTGCTGCTTGACTGAGAGAGTCTTG
TGACTGAGTGCTTGCTGGCAAAGGCTCTAGTCGGCACCCTGCTGTGTCAC
ACAGTGACTTAGTAACAAATCAACGCGAGCACTGTTGACATGAGGCTTTA
TTGGCAGGCCGCATTTCTTCTTGGAATTCAGAATGCTTGGCACTGGAATC
AGCAGTCCAGACACTCCTCTGCGTTGTTGCAGTGTTCACTATGCCGTATG
TGGCTCTCCATGACGGTGCAGTACCAGTACCTATTCGGGTGTCGCCCCAC
TTCACATGAGCGGTTTCGCTCGCCACCAAACACCGTGCGTTGACGGCAAC
CTGATGCCGCCAACACATCTGTGATGCTCATGCACGCTGCTATGGTCCTC
AAGCCATCTGGACACAGCTCTGATGTTGAATCTGCTCTCTGGTGCTGCAG
CTCCTGCCTGGATCGCGCGTCTACGAATGTGCTTCAAGGTGCCTGGGGAT
GCAAGCGGGAGCCTCGCACACAAGTTCACGGGGGATGGCGCATTCTTCGC
AAGCGCTGGTGGCGCGGCGCGACGAAAGCACTTGGTCGGTTTGGCTCAAA
CAAACGGAAGCTTAAAGACAGGTGATCTGATTATGCAAAAGAGAGGCACG
TGCCAACATTTCACATGGTGCTGCTTGTGTGTGCTGAGGTTCTTGTACAG
CCACACCATGCGGTGATGTGCCCGCAAGCCTGATTATATCTTCACTGCAG
TCACCTCGGTGCTTGCTAATTGAGTGGTGCGATCTCGACCAATGTGTGTG
CAGGGACACCGGGGGTAGGCCTGGCGATGACAAGGCGAGCCAAACCAGGG
CGTTTGATACGGTCTGCAGCTTGTTGCAGGTGAGTGAGTCGTGTATACGA
CTTATGCATAGGAGTATGTTTGCTGTCATTACATACTGTCCATGAGGCAG
AAGAACATGCTGGAAGGGCGCAACAATATTCTTGTCACTGCACGTAAAAT
TGCTGCGGAGAGGCTCACCTTCTGAAAGCACCTTCGGTCATGGCCACATT
AATAACAGATGTGGGCATGCACACTGCCACTTGCCTGTTTTCAAATTCTC
ATGCAAGATCTCCTCTTTGTATGTTGCTTCATAGCCACTGCTGGAGGAGG
AGGAGCAGTGCAGGGTATGGCAGGGGAATGCGGAGCACCTGGCCATCAGT
CAGCCTGCCATCACGAGTGAGCCGAGGCGAGTCACTAGGGTGGTGGACGA
GACAGGAGTGGAGCATACATAAACTCACGCACACAGCCACATTGACACTT
TTGGCTCTGGGTGGTGGATTCCTGCCAATGCATGCTGGTTTGCTGCTGGC
CACAGATGGCATGTCATCACTCCCTGCTGCTGGTTCAGCCAGGCTTTCGA
TGGATACATGCCGCCACTGTCGCAGCCACCATATACCTGCTCACTATGCA
GGCAATTGCTTGTACAGCAGTTGTAGCCTGAGTCTGCTGTTATGCCCATC
AGGATCCTGTCACTGGTCTATATATCTCGCCTCGCCTGCATGGTAGCGTT
GTGGATTATGCTGATGAGTTGGCAGCACATTGGCTCAGCGACAGCTTTGA
CTTCTTTACAACAGCTGCACACATGACTTGCTCCTGCGTTGTTCACGTGC
AGATGCATCAATCAAACCCCTCACACATTGAGTGCTGTACATATACATAC
TCCCTGGTGCTGTCGCAGTACGGTACACAGCTCGCTGGCACGCGAAGAAG
ATGCAGCTGTAAATGACACAGCGGCGGTGAAGAGTGTCACCGCTGGACAA
GATGAGGGACCATCTGCCATTGTGGCAGAGTCTGTCGTGTGCAGGGACAC
CGGGGGTAGGCCTGGCGATGACAAGGAGAGCCAAACCAGGGCGTTTGAGA
CAGTCTGCAGCTTGTTGCAGGTGAGTGAGTCGTATACACGACTTATGCAT
AGGAGTCTGTTTGCTGCCATAATATACTTTTTCCATGAGGCAGACGAAGA
TGCTGAAAGGGCGCAACAAAATTCGTGTCACTGCACGTAAAATTGCTGCG
AAAAGCACCGTCGGTCATCACCGTATTAACAACAGATGTGGACATGCACA
CTGCGGCTTGCCTGCTCTAAAATTCTCATGCAAGATCCCCTCCTTGTATG
TTGCTTCATAGCCACTGCTGGAGGAGGAGGAGCAGTGCAGGGTATGGCAG
GGGAATGCGGAGCACCTGGCCATCAGTCAGCTCGCCATCACGAGTGAGCC
GAGGTGGGTCACTAAGGTGGTGGACGAGACAGGAGTGGAGCATACGTAAC
CTAACGCACACGGCCACATTGGTACTATTGGCTTTGGTTGATGGATTGCT
GCCATTGCATGCTGGTTTGCTGGCACCAGTGCACTGCTGGCCCCAAAGAT
TGCGCTTTGGGCACTTCATTTCAGCGGGGGCCTAAGCCTCACATCTGCCT
TGCAGTGAGGGGCTCAGTACCATCATTGATATTGACCGCTGCGCCTTGCT
GGATCCACTTATTGCTGGTGCAGGTTGTCTACCTCATGAATTAGATCCCG
GCACGTCACTTCAAGTGTAGGGCACCATTACGACAAGTCTTGTTTGCATT
GGACAATCATCAACTACGTTCCTCTCATACGGGGTGCTGTGACGTCATCA
CCACTCTGCACAACCTTGTTCACATCCTTGCAACTACAATTCTGCTGAAT
CCATCCCTCTCTCCTGTCCACTGTCAGATTGGCAGCACATTGGCTCAACA
ACAGCTTGACTTCTTAACAACAGCTGCACACACGACTTGCTCCTGCGCTG
TACTGCGTGCAGAGTATCAATCAAACCCCTCACACATTGAGTGCTGTACA
AACATACTCCCTGGTGCTGTCGCAGTACGGTACACAGCTCGCTGGCGCGC
AAAGAAGATGCAGCTGGAAATGACACAGCGGCGGTGGAGACCGCCACCGC
TGAACAAGATGAGGGACCATCTGCCACTGTGGCAGAGTCTGGCCGTGTGC
TGCCCGCCAGTTACCCTCTAGCAGCACACGCACAAACTTCAGGGGCACCT
GGTAGTGATGCTACAGGCGACGCTGCTGGCACCAATACATGCCCTCCCGC
TTGGACTGCGTACGGAGGCGATATCCCCACTCCGCATGAGATCACCAGCG
CACAAGGCATTGCCATGCCTTCCACCGACTTGGGCACACCTGCTGCAACC
ACCGCGGTCAGCGCGATCGCCGTCATACAGGAACCCGAGATGCATGTCAG
TGGCCATGCCGGGTCGTCAGGCGTACATGCAACCCGTGGTGTCAAGATTG
ACAACGCCACATGGATAATGCTGGTAAGCGCCTGCGCTGACATAACATGG
CACTGCTGTGACAGCGATGCTTTGATTTCTGAAAGTCGTGTGCATGATTC
ACTGCAACGCCCTCCTGATTTCTGCACGGTGCTGCCTTGTCCTTCATGCC
TGCAGGTGACCAAGTTGGCTCAAGTACAGCTTCGGCGGCACAAGCTGTCA
GTGAACAAGCTGGCTGAAGTACAGCTTCTACGGCACCAGCTGTCAGCGCA
GCAGCTAGTCGACGTACCGGAACCGAGCATCGACAGGTAGGTTTGTGCTC
ACTTTTGTCAGCGCGCACATTCTTGATGCCTCTACTCGAAAGTCCTTGAC
TCGCTTCTTAGGTTTCATGCTATGCGCCAAGGATGTACAGTAACATCAAC
TGCTGTTGCTGTTCTGTGTCCCTCTTCAGCAGGGTTGATGCGACAGGACC
ACCTGAGGGTGCCGTGGCCTCCATCGCTAGCTCCACCAGTGGCGGTTTGT
CAGTGGTAAGTAGCGCCTGGACCGCAAATGACCATGAAGTCAAGCTTGCG
GTTGTTGAAATTCTGTTTTAAATAAACGTGGTCTGCCATCTCCTTGGCGA
AATGTTTGGCTACAGAGAAGGCTGCTCTTTCATGAAGTCGTGCACATTCT
CAATGCACGGTCATTGATGTTATTAGTGTATGGGCAGCTTGGACCAGGAG
TAGATGATTATTGCAAAACACTCCTATTTGAAGTCAGTTATGCAGATGAT
ACAGTAGTCATGTACTCTCCATTTTGAGCAGTGCAAAGCTTCCAATGCGC
ACAACACGTTGCCCTGCAGCTGCTCAAGTGCCAAACTTGTCTTATGTGCA
TGCATGATGGATGGTGGTTAGTGGTGTCATTCTGTCTTAACCTTCTGTCA
AATACAACATTGTGTACGACATGCCACGAGCAAGTGATGTTTTCAGTTGC
AGTTGTCGTGAAAACCACTTGTGAAGTGGTGTATCCGTACAGTGCAAATT
ACCACTGTGCCTCACGCCCTGGTTTGTCTTTTCGCATCTTCTTACAGGCT
GCATTATTGGCTACGGGCGCTCTCTTGGGCACACTCGTCACCTCAGCGAC
CATTTTCATCTACCACCTGAGGCGTCGCGGCATTGCTGGACCTGCTAACA
TGGCATCGTGGCAGCACAGACCAGCTCCGCCTGCTGTTGGTCAACAAGCA
CCGTTGGAACAGCCTCCAGCGCACGCTGCTCCCGTTGACCAGGGTGTCCA
AGTGCTGTTTGAACCCTTTGACGACAGTGCCCGGCGTGCGGCAGTGTCAT
CGAGATGGATCTTGTTAACGGGCCGCATGTGGAGGACACTGTCGGTTGCG
TTTACGGAGCTCGATCGGCTGCCGCCGACTGAGTTTCGGCAGCTGAGCGA
TCCCCTCCTGCATCAAGTGATCATTCTGGTGGAGCAGGCGCAAATGGAGG
TGGGTGCTCATCTGTCATCGAGGTACAGGCATGTGTTGACTTTATGCGAA
TCTAGTTCAGTAAACTGCACTCCAATATTGTTGCATCGTACAGTGCAGCC
TTCGCATGGGAATGCCAGCTTTTGCGTGCTCTGTGGACAAATAATGTTTG
CGAGGGCACCGCCACAGCTACATTTTGTCGCACATCTTGCAATGCTATTG
TGTGTTTTATTTAATGCACCAGACCAGGATGATGTACTTTGACATCTTTT
GTGAAGGTAGAACACTGAGGAGCAAGCGCGGTCACTGCGTTGATGCACAA
CAACTCTTGCCTGGCAGATCCATACTTACAGTCTCAGTGCTGCACTGTGC
ATGTTGTAAGTAGGTGCTGCCTGGCTTTGTCGAATTATGTAGTGTCAAAG
CATGTCTATAGGCAGCTAATTTAGCGCCTGTCTGTGACGACACCTTGAAC
GCCCGAGAAATGACGTGTCCCCGATTATCAGCCACAAACCGTCGCGCTGC
CAGATATCTCAGCATGGGTCACAAGCTTACATATACGTCCTCCCTGCAAG
ACTGCTGCAGGTGGTGGTGCTGCTGCAATTTTGCGCGTACACCAACTTTG
CAACGTATTGAGCTTGCAAGACTTGTGTCGCAGACTGAGAATTGGCCAGG
ACCTCAGCTCTCATAGTTGGCATGAGTTTGGTGCCAGCAGAGAAGCGTGC
TGTGTATTGGCTACTGTTCGAGGTTATCGTCTTCAGCAAATTTACAGCAA
TACTGTTTACAAGAAGTGTGTGCCAACTTGCCATTGAGCTGTGAGAGCAC
CAACATCAGCTCGCAGTGCCTGTTGACTCTCAAAATACTATCAGATGAAC
CATATTCCCTTACGTATTACGCTTCCTTTCACAACCGTATCTGATTTCCA
GTACTCACTGGATGTGGATGTGTCGTTGTGTGCATTGTGCAGATGGAAGG
TCCGCTTGTGTACCGCGACAAAGCGTACCTGGATCCATGGTTCTGCGAGG
AACTGAAGATGCTTCAGCGCAAGGTGTACCTCCTGTACCTGCTGCTCCTA
GTACACCGGTGA

Coding sequence (CDS) from alignment at Contig_87:173757..184368-

>mRNA_14749 ID=mRNA_14749|Name=jgi.p|Trimin1|351318|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1290bp|location=Sequence derived from alignment at Contig_87:173757..184368- (Tribonema minus UTEX_B_3156 )
ATGTCTCCACTCGTCAATGGCCTGCCTGACGACCGCCAGCGCTCACTCAC
GGCCGCATTTGCTGCTTGGGCTTCAACGATCAAGTTTGAGGTGGATGTGA
CGCCTGAGGGGAAGATTACGTTTTCGTTCGGGGATGGCATCAAAGCGCAG
CAGGCATCAGACAAGCTGCTGCTGCAGCAGCCGCAACAGCGATCGGAGAT
GTCGCAAGAGCCACCACCAGACAGCATATCGCGAGTCATCGACATCTACG
CGAAGGTACTCGAGGAGTGGAAGCTGGCGCGCGACGCGAAGGAGCTTTCA
GACAACCAGCGGCGGTGGCCCGTGCTGGCGGAGGCCAGGGAGTTTCTTGA
GACCCAGCTCACTGCTGACCCAGCCAAGCAGTTGGCAGCTGGCAAGCCTG
CGCTGGCCGCACTCGTTAAGGCATATATGCTCAGCCTGCGGCCGTACAGC
ACATGGGCACGGGACGTTGACAAGAGGGCGTGGGGGGCGTCCGATGACAC
CAGAGTGGTGACGGCACCTTCGCCTATCGACCTGCACTGGATGCGCGTGA
TCCGCCCACAGCTGGAGCTTAAGTTGCAGGAGGGGCAGGCGCTCAGTCAG
GTGGCAGCACTGAGAGAGGCCAGGAAAGTGCTGCAGGACGAGACGAAGCA
GCTGCACAAGCAGGTGCAGGAGAAGGAGCTGCTGCTGCTCAAGAGGAAGG
ACCAGCATGGCGCACGCCTGCGTGAGGAGGTGGCGCGGCGGCGTGAAGGC
CGCGTCGCGGTGGCATTGGTGCCGCCGACCGCTGCACTGCCGCCTGCGGC
GCTTGTCCAGGCGCTGGTGCTGGTTGCCGCCGCGTGCGCGCCGCTTACGG
CTTGCGGGCGTGTGCCTGGGGATGCAAGCGGGAGCCTCGCACACAAGTTC
ACGGGGGATGGCGCATTCTTCGCAAGCGCTGGTGGCGCGGCGCGACGAAA
GCACTTGCCACTGCTGGAGGAGGAGGAGCAGTGCAGGGTATGGCAGGGGA
ATGCGGAGCACCTGGCCATCAGTCAGCTCGCCATCACGAGTGAGCCGAGG
TGGGTCACTAAGGTGGTGGACGAGACAGGACTCGATCGGCTGCCGCCGAC
TGAGTTTCGGCAGCTGAGCGATCCCCTCCTGCATCAAGTGATCATTCTGG
TGGAGCAGGCGCAAATGGAGATGGAAGGTCCGCTTGTGTACCGCGACAAA
GCGTACCTGGATCCATGGTTCTGCGAGGAACTGAAGATGCTTCAGCGCAA
GGTGTACCTCCTGTACCTGCTGCTCCTAGTACACCGGTGA