Trimin1|351318|estExt_Genemark1.C_Ctg_870023 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351318
Unique NameTrimin1|351318|estExt_Genemark1.C_Ctg_870023
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length430
Homology
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YRK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK9_9STRA)

HSP 1 Score: 798 bits (2060), Expect = 1.100e-290
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 429
            MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR
Sbjct:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQVAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREGRVAVALVPPTAALXXXXXXXXXXXVAAACAPLTACGRVPGDASGSLAHKFTGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPRWVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 429          
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.310e-26
Identity = 65/97 (67.01%), Postives = 73/97 (75.26%), Query Frame = 0
Query:  334 NAEHLAISQLAITSEPR-WVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDKAYLDPWFCEELKMLQRKVYLLYLLLLVHR 429
            +A   A+S   I    R W T  V  T LDRLPPTEFR LSDPLLHQV+++VEQ Q+EME PLVYRDK YL+PWF EELK LQRKV LLYLLL+VHR
Sbjct:  442 SARRAAVSSRWILLTGRMWRTLAVAITELDRLPPTEFRLLSDPLLHQVLVVVEQTQIEMESPLVYRDKEYLNPWFREELKALQRKVQLLYLLLIVHR 538          
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YTV4_9STRA (ATPase_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.970e-15
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPE--GKITFSFGDGIKAQQASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELSDNQRRWPVL 109
            ++PL+NGLP DRQ+S+ A  AA+ ST K E D+  +   K+T +  D IKAQQ  DK   Q  QQ   +S+     SI++VI++Y K+L++W+ AR AKEL+  + +WPV+
Sbjct:   86 VAPLINGLPADRQQSIDATAAAFHSTFKVEQDMDMKRFSKVTATLWDAIKAQQEQDKK--QHCQQEDPLSKS---SSITQVIEMYEKILQQWEWARQAKELTQVKHQWPVV 191          
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835YMF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMF2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.370e-8
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
Query:  127 QLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQE 194
            Q AAG+ AL ALVKA+ L LRPYS WA D+ + A+G      VVTA +P DL+ MRV+  +L+  L E
Sbjct:  247 QEAAGEQALRALVKAHRLGLRPYSEWALDIPREAYGLGAPVDVVTASTPADLYCMRVMHSELQRTLDE 314          
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Match: A0A835Z2D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.270e-5
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   91 KLARDAKELSDNQRRWPVLAEAREFLETQLTADPAK----QLAAGKPALAALVKAYMLSLRPYSTWARDVDKRAWG--ASDDTRVVTAPSPIDLHWMRVIRPQLELKLQE 194
            K A  A  L D++     L + +  L   ++   AK    Q AAG  A+AAL++A +LS RPYS W++D+   A+G  +SD + ++TA S ++L+ MR +R  LE  + E
Sbjct:  250 KFADAALLLLDSEHNVATLKDMKMRLGRHISTAVAKGHNAQAAAGGQAVAALIRANILSQRPYSEWSQDIPPDAYGPPSSDPSTIITAYSAVNLYCMRGLREDLEKTINE 359          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351318 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YRK9_9STRA1.100e-290100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIN7_9STRA4.310e-2667.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTV4_9STRA5.970e-1544.14ATPase_2 domain-containing protein n=1 Tax=Tribone... [more]
A0A835YMF2_9STRA4.370e-851.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2D0_9STRA1.270e-536.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:173757..184368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351318mRNA_14749Tribonema minus UTEX_B_3156 mRNAContig_87 173757..184368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351318|estExt_Genemark1.C_Ctg_870023 ID=Trimin1|351318|estExt_Genemark1.C_Ctg_870023|Name=jgi.p|Trimin1|351318|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=430bp
MSPLVNGLPDDRQRSLTAAFAAWASTIKFEVDVTPEGKITFSFGDGIKAQ
QASDKLLLQQPQQRSEMSQEPPPDSISRVIDIYAKVLEEWKLARDAKELS
DNQRRWPVLAEAREFLETQLTADPAKQLAAGKPALAALVKAYMLSLRPYS
TWARDVDKRAWGASDDTRVVTAPSPIDLHWMRVIRPQLELKLQEGQALSQ
VAALREARKVLQDETKQLHKQVQEKELLLLKRKDQHGARLREEVARRREG
RVAVALVPPTAALPPAALVQALVLVAAACAPLTACGRVPGDASGSLAHKF
TGDGAFFASAGGAARRKHLPLLEEEEQCRVWQGNAEHLAISQLAITSEPR
WVTKVVDETGLDRLPPTEFRQLSDPLLHQVIILVEQAQMEMEGPLVYRDK
AYLDPWFCEELKMLQRKVYLLYLLLLVHR*
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