mRNA_14723 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A836CLN3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN3_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.970e-76 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRPPR 315 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRPPR Sbjct: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRPPR 105
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A835ZDE5_9STRA (Alkaline-phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE5_9STRA) HSP 1 Score: 137 bits (345), Expect = 6.310e-36 Identity = 67/103 (65.05%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRP 309 P ALGYKKSLA+L SGN +WTY G CG KLTD+W+D PA LKPA C+ NA C YEDELFE RAVQWIKAHDAR+PLFMVYAP AV +P P Sbjct: 147 PKALGYKKSLAFLCSGNRYWTYDAQFGICGDGGGVKLTDLWEDDGPAINLKPAADCS-NALPNCFYEDELFEKRAVQWIKAHDARKPLFMVYAPHAVHSPLAP 248
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A836CMP8_9STRA (Arylsulfatase B-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP8_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.010e-34 Identity = 66/104 (63.46%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRPP 312 P A GYKKSLAYL SGN +WTY G CG + LTD+WQD PA LKPA C N Q CVYEDEL E RA QWIKAHDA EPLFMVYAP A+ +P PP Sbjct: 153 PKARGYKKSLAYLCSGNKYWTYEAQFGICGAGAGPTLTDLWQDDGPAIDLKPAAGCA-NGQANCVYEDELLEQRATQWIKAHDASEPLFMVYAPHALHSPLDPP 255
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A835Z5L6_9STRA (Arylsulfatase B-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5L6_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.890e-29 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTK-LTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRPP 312 P A G+ K L +L SGND W+YT+ G CG ++ LTD+W+D PA LKP C+ N Q GCVYE+ELFE R Q +KAHDA+ PL + YAP +V P +PP Sbjct: 167 PRARGWSKYLGFLFSGNDLWSYTIGNGMCGATAEADDLTDLWEDDGPALALKPPEHCSVNRQDGCVYEEELFEARVTQTLKAHDAQRPLLLTYAPHSVHTPLQPP 271
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A835YXV1_9STRA (Arylsulfatase B-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV1_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.510e-24 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRP 309 P A GY +SLAYL++GND WTYT G CG SK L D+W+D PA P + C Q GC YEDELFE R Q I+ HD +PLF+V+A AV AP P Sbjct: 161 PKARGYSRSLAYLDAGNDQWTYT-GGNMCG--SKYSLKDLWEDDGPAVNYTPPKRCTSATQNGCQYEDELFEARISQTIQFHDQDQPLFLVWATHAVHAPLAP 260
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A835ZHV6_9STRA (Arylsulfatase B-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.890e-21 Identity = 48/103 (46.60%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLKPARTCNHNAQTGCVYEDELFETRAVQWIKAHDAREPLFMVYAPRAVTAPWRP 309 P A GY +SLAYL SGN+ WTY C + L D+W+D PA KP + C Q GC YED LFE R Q I+ HD +PLF+V+A AV +P P Sbjct: 158 PKARGYSRSLAYLASGNNQWTYADGQAMC--SKGVSLIDLWEDDGPAVNYKPPKRCTSTTQNGCEYEDSLFEARVSQTIQFHDQDQPLFLVWATHAVHSPLAP 258
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Match: A0A7S2FAG3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FAG3_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.250e-7 Identity = 39/128 (30.47%), Postives = 57/128 (44.53%), Query Frame = 1 Query: 1 PIALGYKKSLAYLNSGNDFWTYTMTG-------GACGINSKTKLTDIWQ-----DGAPAFGLKPART-C--------NHNAQTGCVYEDELFETRAVQWIKAHDAREP---LFMVYAPRAVTAPWRPP 312 P GY SL+Y ND+W +T+ G + + D+W D PA GL + C + + C+YED LF+TRA++ + HD +P LF+ YAP V P + P Sbjct: 179 PAGRGYDSSLSYFYHTNDYWNFTVDDDFGAGPQGCESLEEGESIYDLWVKEVDGDEGPAIGLNNSIDGCYSGDGAFPEDDVEGNCMYEDALFQTRALKIVNDHDLSQPEHPLFLFYAPHIVHEPLQVP 306 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133602 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14723 ID=mRNA_14723|Name=jgi.p|Trimin1|133602|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=315bp|location=Sequence derived from alignment at Contig_120:382907..383221- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCCATAGCGTTGGGCTACAAAAAGTCTCTGGCTTACCTCAACTCCGGCAAback to top protein sequence of jgi.p|Trimin1|133602 >Trimin1|133602|gw1.120.19.1 ID=Trimin1|133602|gw1.120.19.1|Name=jgi.p|Trimin1|133602|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=105bp PIALGYKKSLAYLNSGNDFWTYTMTGGACGINSKTKLTDIWQDGAPAFGLback to top mRNA from alignment at Contig_120:382907..383221- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14723 ID=mRNA_14723|Name=jgi.p|Trimin1|133602|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=315bp|location=Sequence derived from alignment at Contig_120:382907..383221- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_120:382907..383221- >mRNA_14723 ID=mRNA_14723|Name=jgi.p|Trimin1|133602|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=315bp|location=Sequence derived from alignment at Contig_120:382907..383221- (Tribonema minus UTEX_B_3156 )back to top |