mRNA_14693 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352475
Unique NamemRNA_14693
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A835ZEN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN0_9STRA)

HSP 1 Score: 756 bits (1951), Expect = 2.510e-269
Identity = 573/573 (100.00%), Postives = 573/573 (100.00%), Query Frame = 1 
Query:    1 MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 1719
            MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY
Sbjct:    1 MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 573
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BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.540e-40
Identity = 113/208 (54.33%), Postives = 130/208 (62.50%), Query Frame = 1 
Query: 1168 ASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAY--LRSLTSSSAPCVT---------HA-------------GRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 1719
            +S+ + GSS SG    XXXXXXXXXX   + +R  T EP+P PT D+L +RA LLATPLN L AE Y L AQ Q+ ER DLQRLAY  L  LT +     T         HA             G  G  Q VADALR F+A+ +  + +DRAKPA+APCPAGC RCEGV+C MCG A RAR VPLLY TH  SPHCR A CLGDTY
Sbjct:   69 SSSSSRGSSRSGXXXXXXXXXXXXXXAAVSAKRRVTPEPIPPPTGDDLRKRATLLATPLNALTAEHYCLHAQHQEHER-DLQRLAYPLLADLTWARVNLTTVKNQLGALQHANAAELFTAVAGACGEAGRVQRVADALREFEAKEQDAVNQDRAKPATAPCPAGCSRCEGVSCVMCGVACRARGVPLLYCTHAESPHCRVAFCLGDTY 275
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BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A836CMA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMA2_9STRA)

HSP 1 Score: 2500 bits (6480), Expect = 0.000e+0
Identity = 1749/1749 (100.00%), Postives = 1749/1749 (100.00%), Query Frame = 1 
Query:    1 MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG 5247
            MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG
Sbjct:    1 MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG 1749
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BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A836CQD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQD0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.920e-17
Identity = 74/129 (57.36%), Postives = 85/129 (65.89%), Query Frame = 1 
Query:  724 LESQLDEQNAAAAQLQAQLADLGSCER--AVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQ-----GWVGRFMGWPPSRKRQR 1089
            L  +L+EQ AAAAQL+AQLA+    +   A +     GS SSAQRDAGE+++LRAAL DA ALLAEAR QH AVVAEL+AIQQ                XXXXXXX      GW GRF+GWPPSRKRQR
Sbjct:  169 LHKELEEQKAAAAQLRAQLAERRHRDHHDAAIHD---GSRSSAQRDAGEIAILRAALGDATALLAEAREQHLAVVAELKAIQQRQQHWQQWIELQVEAEXXXXXXXXXXXXXGWAGRFLGWPPSRKRQR 294
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352475 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZEN0_9STRA2.510e-269100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIA2_9STRA4.540e-4054.33Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
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BLAST of jgi.p|Trimin1|352475 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CMA2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQD0_9STRA8.920e-1757.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_120contigContig_120:95560..100440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352475|estExt_Genemark1.C_Ctg_1200012
Hectar predicted targeting categoryother localisation
TranscriptId352797
TrackFilteredModels1
ProteinId352475
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352475gene_14693Tribonema minus UTEX_B_3156 geneContig_120 95560..100440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352475Trimin1|352475|estExt_Genemark1.C_Ctg_1200012Tribonema minus UTEX_B_3156 polypeptideContig_120 95560..100440 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14693_1exon_14693_1Tribonema minus UTEX_B_3156 exonContig_120 95560..95766 +
exon_14693_2exon_14693_2Tribonema minus UTEX_B_3156 exonContig_120 96313..96507 +
exon_14693_3exon_14693_3Tribonema minus UTEX_B_3156 exonContig_120 97164..97214 +
exon_14693_4exon_14693_4Tribonema minus UTEX_B_3156 exonContig_120 97523..97738 +
exon_14693_5exon_14693_5Tribonema minus UTEX_B_3156 exonContig_120 98304..98372 +
exon_14693_6exon_14693_6Tribonema minus UTEX_B_3156 exonContig_120 98573..98827 +
exon_14693_7exon_14693_7Tribonema minus UTEX_B_3156 exonContig_120 98911..98958 +
exon_14693_8exon_14693_8Tribonema minus UTEX_B_3156 exonContig_120 99060..99095 +
exon_14693_9exon_14693_9Tribonema minus UTEX_B_3156 exonContig_120 99177..99224 +
exon_14693_10exon_14693_10Tribonema minus UTEX_B_3156 exonContig_120 99307..99342 +
exon_14693_11exon_14693_11Tribonema minus UTEX_B_3156 exonContig_120 99694..99974 +
exon_14693_12exon_14693_12Tribonema minus UTEX_B_3156 exonContig_120 100161..100440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14693CDS_14693Tribonema minus UTEX_B_3156 CDSContig_120 95560..95766 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14693 ID=mRNA_14693|Name=jgi.p|Trimin1|352475|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1722bp|location=Sequence derived from alignment at Contig_120:95560..100440+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGAGCGGCTTGAACCTGTCCTCGCTCGTTGACACCGTCAACAAGTT
TAAAGATGACATCGAGACGAAGATGGACAATGCCATCATCGCTGGAGCAA
ACGAGCAGCCTTTCGACGCTGCAGATACGGACGCTGGCAGCGATGGCCGC
ATGTCGCGTGCAGAGAGCAGAGCTTCTGCCAAGAGCGACTCGCTGACCGC
CGCTCTCAATGGCGCGACAGAGACGCCTGACAATGAGGTCTCGGTTGCTG
AGGCTGCCACCGCTGAGGTGTTGACGGCAGCGCCGGAGCCGGCCAATGCT
GCGTGCCCTAGCGTCGAGGCGCAGCTGAAGCTCGCATTGGAAGCGTTGGC
GGAGCGGGAGCGGCAGCTGGAGACGTTCATCACCATGCGCAACTCCGTTG
AGCAGCAGCAGCAGCAGTCGAGCACTCCTGCGCAGGCGGCGCTGCAGCCG
GAGATGGCGCCACCGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCA
GCTGCAGCAGCAGTCGAGCACTGCTGCTCAGGCGGAGGTGGCACGGCTCA
GGGACGAGCTGCGCGCGGAGCAGGACAGAGCGCGCGTAACATCCAAGCAT
CTGCGCGCGCTGGAGCTGCAGCGAGCCGATTGGGCGGAGAAGGACAGAAT
TCTCGCGGCGTATGCGGAGGAGGGGCGTGCGCTCGCGCAGAACCAGAGCG
ACATGGAGCGCACGCTGCTGCTGATCATTATGCCCTCTGAGGGGCGCGCG
CTCGCGCAGAACCAGAGCGACATGGAGCGCACGCTGCGGCGCGCGCGCGC
CGACCACCGCGCCGCCGCGGAAGAGCGCGACAGGGCGCGCGCGGAGGCGG
CGGCGCTGGCAGAGAGGCTGAGCACTGCGACGGTGGCAGCGGGGGAGGCG
AAGGCGGAGGCGAAGGCGGCGGCGCGGCAGGTGGCGGCGCTGCAGACGAG
CGGCCAGGCGGCGGCGGCGCGCGTGGCGGCGCTGGAGCGGGAGACATCCG
GGCAGGCGGAGACGGCGCGCATTGCAGGAGCGGTAGGCGAGGCGGCGGCG
GCGTGCGCCGCGGCGCTGCAGCGGGAGGAGGAGCAGGAGGCGGCGGCGGC
CCGCGTCGCAGCGCTGGATGGAAAGGCGGCGGCGGCGCGGCACGCGTCGC
TGGAGCAGGAGCGCCGCGCATCGGCCGTTGCAAACGGCAGCAGCAGCAGT
GGCAGCATCGACAGCGGCAGTGGCAGCAGCAGCGGCAGTGCAGCCGCCGT
CAGCGCCAAGCAGCGCGCCGCCACCTCTGAACCCCTGCCATTCCCCACAG
ATGACGAGTTGTGCCAGCGGGCGGTGCTGCTCGCAACACCGCTCAACACT
CTGCCCGCGGAGCAGTACCGCCTGCGCGCGCAGCAGCAGGACCGCGAGCG
CAGCGACCTGCAGCGGCTGGCGTACCTGCGCTCTCTGACCTCCTCGTCAG
CGCCGTGCGTGACGCATGCGGGGCGGCGGGGGGGGTCGCAGCACGTGGCG
GACGCGCTGCGTGGTTTTCAGGCAGAGGTGGAGGGCGTGATCAAGGAGGA
CAGGGCGAAGCCGGCCTCGGCACCATGCCCCGCCGGCTGCGGGAGGTGTG
AGGGCGTGGCGTGCGACATGTGCGGTGCGGCATACCGCGCGCGGGAGGTG
CCGCTGCTGTACCGCACGCATGAAGGAAGCCCGCACTGCAGGGCCGCGTG
CTGCCTGGGCGACACTTACTGA
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protein sequence of jgi.p|Trimin1|352475

>Trimin1|352475|estExt_Genemark1.C_Ctg_1200012 ID=Trimin1|352475|estExt_Genemark1.C_Ctg_1200012|Name=jgi.p|Trimin1|352475|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=574bp
MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGR
MSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANA
ACPSVEAQLKLALEALAERERQLETFITMRNSVEQQQQQSSTPAQAALQP
EMAPPQQQQQQLQQQQQLQQQSSTAAQAEVARLRDELRAEQDRARVTSKH
LRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIMPSEGRA
LAQNQSDMERTLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEA
KAEAKAAARQVAALQTSGQAAAARVAALERETSGQAETARIAGAVGEAAA
ACAAALQREEEQEAAAARVAALDGKAAAARHASLEQERRASAVANGSSSS
GSIDSGSGSSSGSAAAVSAKQRAATSEPLPFPTDDELCQRAVLLATPLNT
LPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVA
DALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREV
PLLYRTHEGSPHCRAACCLGDTY*
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mRNA from alignment at Contig_120:95560..100440+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14693 ID=mRNA_14693|Name=jgi.p|Trimin1|352475|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4881bp|location=Sequence derived from alignment at Contig_120:95560..100440+ (Tribonema minus UTEX_B_3156 )
ATGTGGAGCGGCTTGAACCTGTCCTCGCTCGTTGACACCGTCAACAAGTT
TAAAGATGACATCGAGACGAAGATGGACAATGCCATCATCGCTGGAGCAA
ACGAGCAGCCTTTCGACGCTGCAGATACGGACGCTGGCAGCGATGGCCGC
ATGTCGCGTGCAGAGAGCAGAGCTTCTGCCAAGAGCGACTCGCTGACCGC
CGCTCTCGTACAGCAGCAGCAATGGGGCTCGACAGACGACAGTGATGTTC
ATCAAGCAGTTGAGCCATTGCCTGTAACAGATGCCTCGAGTGGATCGCCT
AGGGTGGCCGCAGCAGCACCAGTACAGCCAGCAGAATGGGAGTGCCCAGG
CTGCGGTCACAGCATGCCCAGGGGCAACCGGAATCTGCACGAGACACGCT
GCAGGGCTCTCGCCAGGGCTCCGTCGTCCAGCAGCATGCGCACGCCGCCT
GCAGCAGCTGCGCATGCCGCAGCAGCAGAACAGTGGCCTGAGCACGTCAA
TGCAACAGAAGCGGAGCCACCGGCAGATGATGCGGCAGCAGCAGGAACAA
CCGCAGCTCTGCAGCTGCCTGAGTCTTCAGATGTAGCCGATGGCGGAGAG
GAAGATGGCCTGCCGCTGCCGGAGCAGGCAGAGACGACGGCACCACCAGA
CGAGCCACCAGAAAATGCAGCTTCTTCCAAAGTAGTTCCCAAAACATCAC
CACAGAAATCGAAGCTACCTCCAGGCGATACTGCTGCTGCTGCTGCTCCG
GAGAATGGCGCGACAGAGACGCCTGACAATGAGGTCTCGGTTGCTGAGGC
TGCCACCGCTGAGGTGTTGACGGCAGCGCCGGAGCCGGCCAATGCTGCGT
GCCCTAGCGTCGAGGCGCAGCTGAAGCTCGCATTGGAAGCGTTGGCGGAG
CGGGAGCGGCAGCTGGAGACGTTCATCACCATGCGCAACTCCGTTGAGGT
ATGTGTGTACACACGCGCCTAACCGTTATTTTAACCCTACGCCCCAGCTC
GCGAGCCATGACCTGGTTGCTGTTGTCCCAATGTATGTGGTGCGCCTCCA
TGAGCTTGAAGAAAGCACAGGTTACCGTCAGTCTGTCATCAATTCACGGT
CACCCCTTCAGCTGTTGTGTTGATTCAGCCGAATTGAGTTGACCAGCGCA
GTCTTCAGGTGGGGTAAAGCACGTCCTGATTTGTCACTGAAGTCGGGCTT
TCCACACGGTCAGCATATGCTCATACAAAAATTACGCTGGCATACATGTT
GATAACAACAGGGGCGACCATCAGCATATTGCAACTGCGACAGACGTCTG
TTATCAGCGCACGCTGCCATGCCAGTCAGCACGCAAGTAGGCGTGCATAG
TTAACGCCACTGCAGCTTCAGCAGTGCAGCAACAGTGCCAAACCGGTGCT
CAGGCGGTCCGGAAGAGTCAGATGTGCAGATAACGTCCACATCATTGTTG
CACTTCAAAATACACGTATCGAAATTGTTTTCTCCATTTTTATTAATTTA
CTTGGTGTACTGCTCAGACGACAATGCATCAAAGCTGTCGTCGTGTGTGC
GTCTCCTCGACTGCCTGCTCTGCGAAGATGTCAGCACCGCCGCCGCCGCC
GCAGCAGCAGCAGCAGCAGTCGAGCACTCCTGCGCAGGCGGCGCTGCAGC
CGGAGGTGGCACAGCTCAGGCCCGAGCCGAGCCGCTGTTTCCTTAATGTA
TTGCCTTGTCCGTCATGCGTGCTGCTTGTTCACTGATGTGACGTGCGAAG
CTGTTCCACGCGCGCCAATTCTGCACAGATGGCGCCACCAACGCAGCAAG
CAGCAGCAGCAGCAGCAGTCGAGCACTGCTGCTCAGGCGGCGCTGCAGAC
GTGAGCTGCTGTCAGCATAATGTATTGCCCTACCCATCTCGACTGCCCTT
CATACGCCAGTGTGACGTATATGTCCCCACATGCGCTGCCCCTCGTGCAC
CGGCTCTGCGCAGATGGCGCCACCGCAGCAGCAGCAGCAGCAGCTGCAGC
AGCAGCAGCAGCTGCAGCAGCAGTCGAGCACTGCTGCTCAGGCGGAGGTG
GCACGGCTCAGGGACGAGCTGCGCGCGGAGCAGGACAGAGCGCGCGTAAC
ATCCAAGCATCTGCGCGCGCTGGAGCTGCAGCGAGCCGATTGGGCGGAGA
AGGACAGAATTCTCGCGGCGTATGCGGAGGTCAGTGCCCGTCTAGGGTTA
AGCTAGGGTTTTGAAGCGAATTTGCGCGGGAGGGGGGGAGGGGGGGGGGG
GGGGGGGGGGGGGGGCTTGCTAAGCAGATTGCCCTTTGCCAAATAGGACT
TGCATTTTTTATTTGAAGTTACTGCATGTGTGCCAAGGTTCAAGTGATGC
GACCTTGGTTCGAATCGCACTCATTTGAGTGTCATGACATTGTACGATTA
CAGGTTGAGTATACAAGATGCCTATACACATATGCTGAGTGATGGTCAGT
GCAAAGCACCAGCGCATGTTCCAGTTTCACAAAGCCCTGGAACCCATACT
CATGTGTGCTATCAACTGTCACCCCATCAGGCTCATGTCAATGTGTCGGT
ATTAGTGTTACAATGTAGACAAATGGCTGCGATCACTGCTTAGTTGCTGA
AACTGCCGCCGCTTCCCGAAGTTGGGGCGCGCGCTGGTGCAGAAGCAGAG
CAACATGGCGCAAATGCCGCGCAATGGACATGTTGTTACACTTTTAGTAC
ATGAAGTTCACACCCAAAACATACATGACTGCTGCCGCTTCCAGGAGGGG
CGTGCGCTCGCGCAGAACCAGAGCGACATGGAGCGCACGCTGCTGCTGAT
CATTATGCCCTCTGTTGAATCCAGGTATATGAAATTGCACTCAAAAGTGT
GAAGTTTACACTCAAAAGTGTATATATACAGTCGCCGCCGCTTCCAGGAG
GGGCGTGCACTCGCGCAGAATCAGAGCGACATCGAGCAAACGCTACTATG
CCCATTGCTGCATTTCACATGCAGTTCATACTAAAAGCACATACAAACTG
CCGCTGTGTCCAGGAGGGGCGCGCGCTCGCGCAGAACCAGAGCGACATGG
AGCGCACGCTGCGGCGCGCGCGCGCCGACCACCGCGCCGCCGCGGAAGAG
CGCGACAGGGCGCGCGCGGAGGCGGCGGCGCTGGCAGAGAGGCTGAGCAC
TGCGACGGTGGCAGCGGGGGAGGCGAAGGCGGAGGCGAAGGCGGCGGCGC
GGCAGGTGGCGGCGCTGCAGACGAGCGGCCAGGCGGCGGCGGCGCGCGTG
GCGGCGCTGGAGCGGGAGGTGAGCCGTTTGCATGTGTGCTGATTACGTGT
GGGGGTAGTATTACAGTTAGGGTCAGGGTTAGAGTGCGCTTTACGAAGCA
GACATCCGGGCAGGCGGAGACGGCGCGCATTGCAGGAGCGGTAGGCGAGG
TGCGCCGTGCTCGCGTGTAGCAGTTGGGCTTAGGCCTGGGGTTGGAGGTA
GGGTTTAATTAAGGGTTAGTGCGGTCCTTAAGCTACGGACATGCGGGCAG
GCGGCGGCGGCGTGCGCCGCGGCGCTGCAGCGGGAGGTGAGAGCTGAGCC
GTTTTACATGTGTGCTGATGAGTTTTAGGGGTAGTATTAGGGTTCCAGTG
CACTTCAAACCGCTGAGGAGGAGCAGGAGGCGGCGGCGGCCCGCGTCGCA
GCGCTGGATGGAAAGGTAAGAGCTGAGCCATGCGCGCGAATTCTGGTTAG
GATTAGAGCTTAGGGTTAGTGCGCTCCTTCCGCTCGGAATGGGGCAGGCG
GCGGCGGCGCGGCACGCGTCGCTGGAGCAGGAGGTGAGCTCGTGGGTGGG
GATGAGGGTTATGAACCGAGCGTGATGCGAGAGGTGGCAATGGATCATCG
CCCTCTTGTAGAAGCGGCTTGCTACCAGAATCTACAAGTATCTTGCGAAC
ATCTTGAAAGTGTCTCAAGTCAGCAGCAGCAACAGCAGCAGGGGCAGTAG
CATCACCAACGCCGGCGGCAGTGGCAGCGGCAGTTTCATCATTGCCGGCA
GCAGCAGCAGCAGAGCGTTGCTTGCAGATCCCAACGTATCTCGTCCACCT
ACTAGCAGCAGCAGCAGCAGCAGCAGCATCAACAGCAGCAGCGGAGCTGT
CAGCAGTGAGCCGTATGCTGTCGCACACCGCAAGCGCCGCGCATCGGCCG
TTGCAAACGGCAGCAGCAGCAGTGGCAGCATCGACAGCGGCAGTGGCAGC
AGCAGCGGCAGTGCAGCCGCCGTCAGCGCCAAGCAGCGCGCCGCCACCTC
TGAACCCCTGCCATTCCCCACAGATGACGAGTTGTGCCAGCGGGCGGTGC
TGCTCGCAACACCGCTCAACACTCTGCCCGCGGAGCAGTACCGCCTGCGC
GCGCAGCAGCAGGACCGCGAGCGCAGCGACCTGCAGCGGCTGGCGTACCT
GCGCTCTCTGACCTCGTCAGAGCCGTAGTACCAATGCCTCATCTCGAGGA
GCCATGGGTGCCGATCGACCTCACCAGCGTCACGAACGACCGACGCGCAC
ATAATTGGGGGGAAAAAACTGAAAGTGGCAGCAAATCAGCAGCAGTTGGT
TATGGGCAATAATTCAAGTTGCCAGGACTCAAGCATGCAAACGCGGCGGA
GCTCGTCAGCGCCGTGCGTGACGCATGCGGGGCGGCGGGGGGGGTCGCAG
CACGTGGCGGACGCGCTGCGTGGTTTTCAGGCAGAGGTGGAGGGCGTGAT
CAAGGAGGACAGGGCGAAGCCGGCCTCGGCACCATGCCCCGCCGGCTGCG
GGAGGTGTGAGGGCGTGGCGTGCGACATGTGCGGTGCGGCATACCGCGCG
CGGGAGGTGCCGCTGCTGTACCGCACGCATGAAGGAAGCCCGCACTGCAG
GGCCGCGTGCTGCCTGGGCGACACTTACTGA
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Coding sequence (CDS) from alignment at Contig_120:95560..100440+

>mRNA_14693 ID=mRNA_14693|Name=jgi.p|Trimin1|352475|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1722bp|location=Sequence derived from alignment at Contig_120:95560..100440+ (Tribonema minus UTEX_B_3156 )
ATGTGGAGCGGCTTGAACCTGTCCTCGCTCGTTGACACCGTCAACAAGTT
TAAAGATGACATCGAGACGAAGATGGACAATGCCATCATCGCTGGAGCAA
ACGAGCAGCCTTTCGACGCTGCAGATACGGACGCTGGCAGCGATGGCCGC
ATGTCGCGTGCAGAGAGCAGAGCTTCTGCCAAGAGCGACTCGCTGACCGC
CGCTCTCAATGGCGCGACAGAGACGCCTGACAATGAGGTCTCGGTTGCTG
AGGCTGCCACCGCTGAGGTGTTGACGGCAGCGCCGGAGCCGGCCAATGCT
GCGTGCCCTAGCGTCGAGGCGCAGCTGAAGCTCGCATTGGAAGCGTTGGC
GGAGCGGGAGCGGCAGCTGGAGACGTTCATCACCATGCGCAACTCCGTTG
AGCAGCAGCAGCAGCAGTCGAGCACTCCTGCGCAGGCGGCGCTGCAGCCG
GAGATGGCGCCACCGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAGCAGCA
GCTGCAGCAGCAGTCGAGCACTGCTGCTCAGGCGGAGGTGGCACGGCTCA
GGGACGAGCTGCGCGCGGAGCAGGACAGAGCGCGCGTAACATCCAAGCAT
CTGCGCGCGCTGGAGCTGCAGCGAGCCGATTGGGCGGAGAAGGACAGAAT
TCTCGCGGCGTATGCGGAGGAGGGGCGTGCGCTCGCGCAGAACCAGAGCG
ACATGGAGCGCACGCTGCTGCTGATCATTATGCCCTCTGAGGGGCGCGCG
CTCGCGCAGAACCAGAGCGACATGGAGCGCACGCTGCGGCGCGCGCGCGC
CGACCACCGCGCCGCCGCGGAAGAGCGCGACAGGGCGCGCGCGGAGGCGG
CGGCGCTGGCAGAGAGGCTGAGCACTGCGACGGTGGCAGCGGGGGAGGCG
AAGGCGGAGGCGAAGGCGGCGGCGCGGCAGGTGGCGGCGCTGCAGACGAG
CGGCCAGGCGGCGGCGGCGCGCGTGGCGGCGCTGGAGCGGGAGACATCCG
GGCAGGCGGAGACGGCGCGCATTGCAGGAGCGGTAGGCGAGGCGGCGGCG
GCGTGCGCCGCGGCGCTGCAGCGGGAGGAGGAGCAGGAGGCGGCGGCGGC
CCGCGTCGCAGCGCTGGATGGAAAGGCGGCGGCGGCGCGGCACGCGTCGC
TGGAGCAGGAGCGCCGCGCATCGGCCGTTGCAAACGGCAGCAGCAGCAGT
GGCAGCATCGACAGCGGCAGTGGCAGCAGCAGCGGCAGTGCAGCCGCCGT
CAGCGCCAAGCAGCGCGCCGCCACCTCTGAACCCCTGCCATTCCCCACAG
ATGACGAGTTGTGCCAGCGGGCGGTGCTGCTCGCAACACCGCTCAACACT
CTGCCCGCGGAGCAGTACCGCCTGCGCGCGCAGCAGCAGGACCGCGAGCG
CAGCGACCTGCAGCGGCTGGCGTACCTGCGCTCTCTGACCTCCTCGTCAG
CGCCGTGCGTGACGCATGCGGGGCGGCGGGGGGGGTCGCAGCACGTGGCG
GACGCGCTGCGTGGTTTTCAGGCAGAGGTGGAGGGCGTGATCAAGGAGGA
CAGGGCGAAGCCGGCCTCGGCACCATGCCCCGCCGGCTGCGGGAGGTGTG
AGGGCGTGGCGTGCGACATGTGCGGTGCGGCATACCGCGCGCGGGAGGTG
CCGCTGCTGTACCGCACGCATGAAGGAAGCCCGCACTGCAGGGCCGCGTG
CTGCCTGGGCGACACTTACTGA
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