Trimin1|352475|estExt_Genemark1.C_Ctg_1200012 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352475
Unique Name	Trimin1\|352475\|estExt_Genemark1.C_Ctg_1200012
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	574

Homology

[Close]

BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A835ZEN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN0_9STRA)

HSP 1 Score: 756 bits (1951), Expect = 2.510e-269
Identity = 573/573 (100.00%), Postives = 573/573 (100.00%), Query Frame = 0

Query:    1 MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 573
            MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY
Sbjct:    1 MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGRMSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANAACPSVEAQLKLALEALAERERQLETFITMRNSVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQAEVARLRDELRAEQDRARVTSKHLRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIXXXXXXXXXXXXXXXXXXLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEAKAEAKAAARQVAALQTSGXXXXXXXXXXERXXXXXXXXXXIAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 573

[Close]

BLAST of jgi.p|Trimin1|352475 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.540e-40
Identity = 113/208 (54.33%), Postives = 130/208 (62.50%), Query Frame = 0

Query:  390 ASAVANGSSSSGSIDSXXXXXXXXXXXXXAKQRAATSEPLPFPTDDELCQRAVLLATPLNTLPAEQYRLRAQQQDRERSDLQRLAY--LRSLTSSSAPCVT---------HA-------------GRRGGSQHVADALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREVPLLYRTHEGSPHCRAACCLGDTY 573
            +S+ + GSS SG    XXXXXXXXXX   + +R  T EP+P PT D+L +RA LLATPLN L AE Y L AQ Q+ ER DLQRLAY  L  LT +     T         HA             G  G  Q VADALR F+A+ +  + +DRAKPA+APCPAGC RCEGV+C MCG A RAR VPLLY TH  SPHCR A CLGDTY
Sbjct:   69 SSSSSRGSSRSGXXXXXXXXXXXXXXAAVSAKRRVTPEPIPPPTGDDLRKRATLLATPLNALTAEHYCLHAQHQEHER-DLQRLAYPLLADLTWARVNLTTVKNQLGALQHANAAELFTAVAGACGEAGRVQRVADALREFEAKEQDAVNQDRAKPATAPCPAGCSRCEGVSCVMCGVACRARGVPLLYCTHAESPHCRVAFCLGDTY 275

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352475 vs. uniprot

BLAST of jgi.p|Trimin1|352475 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZEN0_9STRA	2.510e-269	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIA2_9STRA	4.540e-40	54.33	Histone acetyltransferase n=1 Tax=Tribonema minus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 262..289
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	COILS	Coil	Coil	coord: 453..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..432

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_120	contig	Contig_120:95560..100440 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352475	mRNA_14693	Tribonema minus UTEX_B_3156	mRNA	Contig_120 95560..100440 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352475|estExt_Genemark1.C_Ctg_1200012 ID=Trimin1|352475|estExt_Genemark1.C_Ctg_1200012|Name=jgi.p|Trimin1|352475|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=574bp
MWSGLNLSSLVDTVNKFKDDIETKMDNAIIAGANEQPFDAADTDAGSDGR
MSRAESRASAKSDSLTAALNGATETPDNEVSVAEAATAEVLTAAPEPANA
ACPSVEAQLKLALEALAERERQLETFITMRNSVEQQQQQSSTPAQAALQP
EMAPPQQQQQQLQQQQQLQQQSSTAAQAEVARLRDELRAEQDRARVTSKH
LRALELQRADWAEKDRILAAYAEEGRALAQNQSDMERTLLLIIMPSEGRA
LAQNQSDMERTLRRARADHRAAAEERDRARAEAAALAERLSTATVAAGEA
KAEAKAAARQVAALQTSGQAAAARVAALERETSGQAETARIAGAVGEAAA
ACAAALQREEEQEAAAARVAALDGKAAAARHASLEQERRASAVANGSSSS
GSIDSGSGSSSGSAAAVSAKQRAATSEPLPFPTDDELCQRAVLLATPLNT
LPAEQYRLRAQQQDRERSDLQRLAYLRSLTSSSAPCVTHAGRRGGSQHVA
DALRGFQAEVEGVIKEDRAKPASAPCPAGCGRCEGVACDMCGAAYRAREV
PLLYRTHEGSPHCRAACCLGDTY*